Clone Information

BLAST Search Result

Clone Name	rbags9m02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)	96	2e-20
2	CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)	96	2e-20
3	CUL3_CAEEL (Q17391) Cullin-3	92	3e-19
4	CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)	82	3e-16
5	CUL1_ARATH (Q94AH6) Cullin-1	75	5e-14
6	CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)	71	6e-13
7	CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)	68	6e-12
8	CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)	68	6e-12
9	CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)	68	6e-12
10	CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)	68	6e-12
11	CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)	68	6e-12
12	CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)	67	8e-12
13	CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)	67	8e-12
14	CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)	67	8e-12
15	CUL4_CAEEL (Q17392) Cullin-4	65	3e-11
16	CUL2_CAEEL (Q17390) Cullin-2	65	4e-11
17	CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)	64	1e-10
18	CUL6_CAEEL (Q21346) Cullin-6	63	2e-10
19	CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 h...	57	8e-09
20	CUL3_YEAST (P53202) Cullin-3 (Cullin-B)	55	3e-08
21	CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A)...	52	5e-07
22	CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calciu...	51	6e-07
23	CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)	50	1e-06
24	CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calc...	50	1e-06
25	CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)	50	2e-06
26	CUL4_SCHPO (O14122) Cullin-4 (Cul-4)	49	4e-06
27	CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calc...	47	1e-05
28	CUL5_CAEEL (Q23639) Cullin-5	44	7e-05
29	T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein...	30	1.1
30	Y047_MYCPN (P75067) Hypothetical protein MG037 homolog (D09_orf451)	30	1.1
31	TR240_HUMAN (Q9UHV7) Thyroid hormone receptor-associated protein...	30	1.4
32	SPEN_DROME (Q8SX83) Protein split ends	30	1.4
33	MANC_SALTY (P26340) Mannose-1-phosphate guanylyltransferase [GDP...	30	1.4
34	T240L_HUMAN (Q71F56) Thyroid hormone receptor-associated protein...	29	3.2
35	CGRE1_HUMAN (Q99674) Cell growth regulator with EF hand domain 1...	29	3.2
36	STAT3_MOUSE (P42227) Signal transducer and activator of transcri...	29	3.2
37	STAT3_HUMAN (P40763) Signal transducer and activator of transcri...	29	3.2
38	STAT3_BOVIN (P61635) Signal transducer and activator of transcri...	29	3.2
39	MLO10_ARATH (Q9FKY5) MLO-like protein 10 (AtMlo10)	28	4.2
40	MURB_CLOPE (Q8XNI0) UDP-N-acetylenolpyruvoylglucosamine reductas...	28	4.2
41	SOX15_HUMAN (O60248) SOX-15 protein (SOX-20 protein) (SOX-12 pro...	28	5.5
42	SEM5A_HUMAN (Q13591) Semaphorin-5A precursor (Semaphorin F) (Sem...	28	5.5
43	ZAP1_YEAST (P47043) Zinc-responsive transcriptional regulator ZAP1	28	5.5
44	NUOG_SHEON (Q8EI34) NADH-quinone oxidoreductase chain 3 (EC 1.6....	28	5.5
45	SYFB_RICTY (Q68WW1) Phenylalanyl-tRNA synthetase beta chain (EC ...	28	5.5
46	SYFB_RICPR (Q9ZDB4) Phenylalanyl-tRNA synthetase beta chain (EC ...	28	5.5
47	CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel al...	28	5.5
48	ENV_CAEVG (P31627) Env polyprotein precursor (Coat polyprotein) ...	28	7.2
49	STAT3_RAT (P52631) Signal transducer and activator of transcript...	28	7.2
50	PURL_ENTFA (Q833Y9) Phosphoribosylformylglycinamidine synthase I...	27	9.3
51	SACY_BACSU (P15401) Levansucrase and sucrase synthesis operon an...	27	9.3
52	NUOG_SHIFL (Q7UC56) NADH-quinone oxidoreductase chain 3 (EC 1.6....	27	9.3
53	NUOG_SALTY (P0A1Y4) NADH-quinone oxidoreductase chain G (EC 1.6....	27	9.3
54	NUOG_SALTI (P0A1Y5) NADH-quinone oxidoreductase chain G (EC 1.6....	27	9.3
55	NUOG_ECOLI (P33602) NADH-quinone oxidoreductase chain G (EC 1.6....	27	9.3
56	NUOG_ECOL6 (Q8FFJ9) NADH-quinone oxidoreductase chain 3 (EC 1.6....	27	9.3
57	NUOG_ECO57 (Q8XCX2) NADH-quinone oxidoreductase chain 3 (EC 1.6....	27	9.3
58	NUOG_YERPE (Q8ZDL2) NADH-quinone oxidoreductase chain 3 (EC 1.6....	27	9.3

>CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)|
          Length = 768

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKV 188
           K +IEAAIVRIMKSR+ + HN +V EVT+QL+ARFLP+PVVIKKRIE LIERE+L R   
Sbjct: 700 KHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPE 759

Query: 187 DRKLYRYLA 161
           DRK+Y Y+A
Sbjct: 760 DRKVYTYVA 768

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>CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)|
          Length = 768

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKV 188
           K +IEAAIVRIMKSR+ + HN +V EVT+QL+ARFLP+PVVIKKRIE LIERE+L R   
Sbjct: 700 KHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPE 759

Query: 187 DRKLYRYLA 161
           DRK+Y Y+A
Sbjct: 760 DRKVYTYVA 768

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>CUL3_CAEEL (Q17391) Cullin-3|
          Length = 777

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 41/69 (59%), Positives = 61/69 (88%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKV 188
           K ++EAAIVRIMK+R+ L+HN++V EVT+QL+ RF+P+P++IK+RIE+LIERE+L RD+ 
Sbjct: 709 KLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEH 768

Query: 187 DRKLYRYLA 161
           D + Y+Y+A
Sbjct: 769 DHRAYQYIA 777

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>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)|
          Length = 785

 Score = 82.0 bits (201), Expect = 3e-16
 Identities = 37/69 (53%), Positives = 54/69 (78%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKV 188
           K Q +A IVR+MK R+V +HN ++ EVT+QL  RF P+P++IK+RIE+LIERE+L+R   
Sbjct: 717 KHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQAD 776

Query: 187 DRKLYRYLA 161
           + ++Y YLA
Sbjct: 777 NGRIYEYLA 785

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>CUL1_ARATH (Q94AH6) Cullin-1|
          Length = 738

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 37/66 (56%), Positives = 49/66 (74%)
 Frame = -1

Query: 358 IEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRK 179
           I+AAIVRIMKSR+VL H  +V+E  +QL   F P+   IKKR+E LI R++LERDK +  
Sbjct: 673 IDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPN 732

Query: 178 LYRYLA 161
           ++RYLA
Sbjct: 733 MFRYLA 738

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>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)|
          Length = 895

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 37/67 (55%), Positives = 49/67 (73%)
 Frame = -1

Query: 361  QIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDR 182
            QI+AAIVRIMK R+ L HN +V+EV  QL  +F   P  +KKRIESLI+R+++ERDK + 
Sbjct: 831  QIDAAIVRIMKMRKTLSHNLLVSEVYNQL--KFPVKPADLKKRIESLIDRDYMERDKENP 888

Query: 181  KLYRYLA 161
              Y Y+A
Sbjct: 889  NQYNYIA 895

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>CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)|
          Length = 774

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 35/66 (53%), Positives = 47/66 (71%)
 Frame = -1

Query: 358 IEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRK 179
           I+AAIVRIMK R+ L+H ++++EV  QL  RF P   VIKK I+ LIE+E+LER +  + 
Sbjct: 709 IQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKD 768

Query: 178 LYRYLA 161
            Y YLA
Sbjct: 769 TYSYLA 774

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>CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)|
          Length = 659

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 36/67 (53%), Positives = 49/67 (73%)
 Frame = -1

Query: 361 QIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDR 182
           QI+AAIVRIMK R+ L HN +V+E+  QL  +F   P  +KKRIESLI+R+++ERDK + 
Sbjct: 595 QIDAAIVRIMKMRKTLGHNLLVSELYNQL--KFPVKPGDLKKRIESLIDRDYMERDKDNP 652

Query: 181 KLYRYLA 161
             Y Y+A
Sbjct: 653 NQYHYVA 659

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>CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)|
          Length = 776

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = -1

Query: 358 IEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRK 179
           I+AAIVRIMK R+VL H  ++ EV  QL +RF P   VIKK I+ LIE+E+LER   ++ 
Sbjct: 711 IQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKD 770

Query: 178 LYRYLA 161
            Y YLA
Sbjct: 771 TYSYLA 776

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>CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)|
          Length = 776

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = -1

Query: 358 IEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRK 179
           I+AAIVRIMK R+VL H  ++ EV  QL +RF P   VIKK I+ LIE+E+LER   ++ 
Sbjct: 711 IQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKD 770

Query: 178 LYRYLA 161
            Y YLA
Sbjct: 771 TYSYLA 776

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>CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)|
          Length = 776

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = -1

Query: 358 IEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRK 179
           I+AAIVRIMK R+VL H  ++ EV  QL +RF P   VIKK I+ LIE+E+LER   ++ 
Sbjct: 711 IQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKD 770

Query: 178 LYRYLA 161
            Y YLA
Sbjct: 771 TYSYLA 776

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>CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)|
          Length = 745

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 33/69 (47%), Positives = 50/69 (72%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKV 188
           K  ++AAIVRIMK+R+VL HN+++ EV  Q +ARF P+  +IKK IE LI+++++ER + 
Sbjct: 677 KMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQA 736

Query: 187 DRKLYRYLA 161
               Y Y+A
Sbjct: 737 SADEYSYVA 745

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>CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)|
          Length = 745

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 33/69 (47%), Positives = 50/69 (72%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKV 188
           K  ++AAIVRIMK+R+VL HN+++ EV  Q +ARF P+  +IKK IE LI+++++ER + 
Sbjct: 677 KMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQA 736

Query: 187 DRKLYRYLA 161
               Y Y+A
Sbjct: 737 SADEYSYVA 745

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>CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)|
          Length = 745

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 33/69 (47%), Positives = 50/69 (72%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKV 188
           K  ++AAIVRIMK+R+VL HN+++ EV  Q +ARF P+  +IKK IE LI+++++ER + 
Sbjct: 677 KMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQA 736

Query: 187 DRKLYRYLA 161
               Y Y+A
Sbjct: 737 SADEYSYVA 745

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>CUL4_CAEEL (Q17392) Cullin-4|
          Length = 840

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 33/67 (49%), Positives = 50/67 (74%)
 Frame = -1

Query: 361 QIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDR 182
           +I+AA+VRIMK+R+ L+H +++TE+ +QL  RF  +   IKKR+ESLIERE++ RD  + 
Sbjct: 776 KIDAAVVRIMKARKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEA 833

Query: 181 KLYRYLA 161
             Y Y+A
Sbjct: 834 SSYNYVA 840

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>CUL2_CAEEL (Q17390) Cullin-2|
          Length = 776

 Score = 65.1 bits (157), Expect = 4e-11
 Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLER-DK 191
           K  +E AIVRIMK+R+VL HN++VTE+  Q + RF P+   IKK IE LIE+ +++R D+
Sbjct: 709 KYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQ 768

Query: 190 VDRKLYRYLA 161
            D   Y+YLA
Sbjct: 769 NDE--YQYLA 776

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>CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)|
          Length = 780

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKV 188
           K  I A IVRIMK+R+ + H  ++TEV  QL  RF P   +IK+ I SLIE+E++ R + 
Sbjct: 712 KSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEG 771

Query: 187 DRKLYRYLA 161
            + LY YLA
Sbjct: 772 QKDLYEYLA 780

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>CUL6_CAEEL (Q21346) Cullin-6|
          Length = 729

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 31/69 (44%), Positives = 47/69 (68%)
 Frame = -1

Query: 367 KPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKV 188
           K +I+A IVRIMK+R+ L H  ++ E+  QL++RF PN  +IK  IE LIE+ ++ R + 
Sbjct: 661 KYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSEN 720

Query: 187 DRKLYRYLA 161
           +  +Y YLA
Sbjct: 721 EHNVYEYLA 729

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>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)|
          Length = 767

 Score = 57.4 bits (137), Expect = 8e-09
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -1

Query: 358 IEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRK 179
           +++AIVRIMK+RR L H  +V E   Q+++RF P    IK+ I+ LIE+E+LER   D  
Sbjct: 704 LQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLERQGRDEY 763

Query: 178 LY 173
           +Y
Sbjct: 764 IY 765

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>CUL3_YEAST (P53202) Cullin-3 (Cullin-B)|
          Length = 744

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 25/67 (37%), Positives = 42/67 (62%)
 Frame = -1

Query: 361 QIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDR 182
           ++ A IVRIMK+   L H  ++   TK+ Q+R    P ++K+ I+ LIE+E+++R+  D 
Sbjct: 678 ELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQRNADDP 737

Query: 181 KLYRYLA 161
             Y YL+
Sbjct: 738 SYYHYLS 744

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>CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A) (E3 ubiquitin|
           ligase complex SCF subunit CDC53)
          Length = 815

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 28/66 (42%), Positives = 42/66 (63%)
 Frame = -1

Query: 358 IEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRK 179
           +EA IVRIMK++R L H ++V E   Q   RF     ++K+ I+SLI++ +L+R   D +
Sbjct: 751 LEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQRGD-DGE 809

Query: 178 LYRYLA 161
            Y YLA
Sbjct: 810 SYAYLA 815

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>CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing|
           receptor) (VACM-1)
          Length = 780

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 24/65 (36%), Positives = 43/65 (66%)
 Frame = -1

Query: 355 EAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRKL 176
           + AI++IMK R+ + +  + TE+ + L+  FLP   +IK++IE LIE +++ RD+ D   
Sbjct: 716 QEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINT 775

Query: 175 YRYLA 161
           + Y+A
Sbjct: 776 FIYMA 780

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>CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)|
          Length = 780

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 24/65 (36%), Positives = 43/65 (66%)
 Frame = -1

Query: 355 EAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRKL 176
           + AI++IMK R+ + +  + TE+ + L+  FLP   +IK++IE LIE +++ RD+ D   
Sbjct: 716 QEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINT 775

Query: 175 YRYLA 161
           + Y+A
Sbjct: 776 FIYMA 780

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>CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing|
           receptor) (VACM-1)
          Length = 780

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 24/65 (36%), Positives = 43/65 (66%)
 Frame = -1

Query: 355 EAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRKL 176
           + AI++IMK R+ + +  + TE+ + L+  FLP   +IK++IE LIE +++ RD+ D   
Sbjct: 716 QEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINT 775

Query: 175 YRYLA 161
           + Y+A
Sbjct: 776 FIYMA 780

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>CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)|
          Length = 780

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 23/65 (35%), Positives = 42/65 (64%)
 Frame = -1

Query: 355 EAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRKL 176
           + AI++IMK R+ + +  + TE+ + L+  FLP   +IK+++E LIE  ++ RD+ D   
Sbjct: 716 QEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINT 775

Query: 175 YRYLA 161
           + Y+A
Sbjct: 776 FIYMA 780

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>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)|
          Length = 734

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/66 (34%), Positives = 42/66 (63%)
 Frame = -1

Query: 361 QIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDR 182
           +++A+IVR+MK +  + H+ +V  V   ++ R +P    +K  IE L+E+E+LER+  D 
Sbjct: 670 ELQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLERE--DN 727

Query: 181 KLYRYL 164
            +Y Y+
Sbjct: 728 DIYTYV 733

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>CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing|
           receptor) (VACM-1)
          Length = 780

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 22/61 (36%), Positives = 40/61 (65%)
 Frame = -1

Query: 343 VRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRKLYRYL 164
           ++IMK R+ + +  + TE+ + L+  FLP   +IK++IE LIE +++ RD+ D   + Y+
Sbjct: 720 IQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYM 779

Query: 163 A 161
           A
Sbjct: 780 A 780

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>CUL5_CAEEL (Q23639) Cullin-5|
          Length = 741

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 20/67 (29%), Positives = 42/67 (62%)
 Frame = -1

Query: 361 QIEAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDR 182
           +++  IV+I+K+R+      +  E+ + L+  F+PN  +IK++I+ LIE +++ER   D 
Sbjct: 675 RVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDI 734

Query: 181 KLYRYLA 161
             + Y++
Sbjct: 735 NTFVYIS 741

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>T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein 2 (Thyroid|
           hormone receptor-associated protein complex 240 kDa
           component-like)
          Length = 2207

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = +2

Query: 38  KPHDSAEELQPRSKSTVPGRHGFCSF---VHGQSNVSTAKET*LRKIAVELPIYLVPLQE 208
           +P+D  E+  P +KS     H  C+F   +HG+SNV T+ E     IA   PIYL+  + 
Sbjct: 148 RPYDKDEK--PVNKS----EHLSCAFTFFLHGESNVCTSVE-----IAQHQPIYLINEEH 196

Query: 209 LTLNQ 223
           L + Q
Sbjct: 197 LHMAQ 201

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>Y047_MYCPN (P75067) Hypothetical protein MG037 homolog (D09_orf451)|
          Length = 451

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 224 GLDPFLDHHRVRQEACLELLRNLCDYAVVVQDPPGL 331
           G   F+ +H   ++  LE+  N CD  + VQ+ PGL
Sbjct: 48  GFPNFVWNHEFAKKIILEVFGNFCDSVLAVQNDPGL 83

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>TR240_HUMAN (Q9UHV7) Thyroid hormone receptor-associated protein complex 240|
           kDa component (Trap240) (Thyroid hormone
           receptor-associated protein 1) (Vitamin D3
           receptor-interacting protein complex component DRIP250)
           (DRIP 250) (Activator-recruited cofac
          Length = 2174

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = +2

Query: 38  KPHDSAEELQPRSKSTVPGRHGFCSF---VHGQSNVSTAKET*LRKIAVELPIYLVPLQE 208
           KP++  E+  P +KS     H  CSF   +HG SNV T+ E     I    P+YL+  + 
Sbjct: 145 KPYEKDEK--PINKS----EHLSCSFTFFLHGDSNVCTSVE-----INQHQPVYLLSEEH 193

Query: 209 LTLNQ 223
           +TL Q
Sbjct: 194 ITLAQ 198

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>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = -3

Query: 335  HEVQEGPGPQQHSHRGYEA-----APGTLPAEPGGDQEKDRVP 222
            H V  G G Q HSH  +EA     A G+ P  P  D+  + +P
Sbjct: 1244 HHVSRGRGHQLHSHHSHEASGGESADGSRPGTPLCDERPEVLP 1286

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>MANC_SALTY (P26340) Mannose-1-phosphate guanylyltransferase [GDP] (EC|
           2.7.7.22) (GDP-mannose pyrophosphorylase) (GMP)
          Length = 480

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 221 QGLDPFLDHHRVRQEACLELLRNLCDYAVVVQDPPGLHDPHDGG 352
           +G+DP LD  RV +EA L       DYAV+ +    +  P D G
Sbjct: 235 RGVDPDLDFIRVDEEAFLACPEESIDYAVMERTADAVVMPMDAG 278

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>T240L_HUMAN (Q71F56) Thyroid hormone receptor-associated protein 2 (Thyroid|
           hormone receptor-associated protein complex 240 kDa
           component-like)
          Length = 2210

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 104 FCSFVHGQSNVSTAKET*LRKIAVELPIYLVPLQELTLNQ 223
           F  F+HG+SNV T+ E     IA   PIYL+  + + + Q
Sbjct: 167 FTFFLHGESNVCTSVE-----IAQHQPIYLINEEHIHMAQ 201

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>CGRE1_HUMAN (Q99674) Cell growth regulator with EF hand domain 1 (Cell growth|
           regulatory gene 11 protein)
          Length = 301

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -3

Query: 332 EVQEGPGPQQHSHRGYEAAPGTLP--AEPGGDQEKDRVPD*A*VPGEGQGR*EA 177
           E QE PGP++ +    EA   +L    EPGG  E D   D     GE +G+ EA
Sbjct: 180 ETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEAD--GDVPGPRGEAEGQAEA 231

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>STAT3_MOUSE (P42227) Signal transducer and activator of transcription 3|
           (Acute-phase response factor)
          Length = 770

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 191 LVPLQELTLNQGLDPFLDHHRVRQEACLELLRNLCDYAVVVQDPP 325
           L  LQ+    +G DP + H  + +E  +EL RNL   A VV+  P
Sbjct: 284 LEELQQKVSYKG-DPIVQHRPMLEERIVELFRNLMKSAFVVERQP 327

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>STAT3_HUMAN (P40763) Signal transducer and activator of transcription 3|
           (Acute-phase response factor)
          Length = 770

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 191 LVPLQELTLNQGLDPFLDHHRVRQEACLELLRNLCDYAVVVQDPP 325
           L  LQ+    +G DP + H  + +E  +EL RNL   A VV+  P
Sbjct: 284 LEELQQKVSYKG-DPIVQHRPMLEERIVELFRNLMKSAFVVERQP 327

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>STAT3_BOVIN (P61635) Signal transducer and activator of transcription 3|
          Length = 770

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 191 LVPLQELTLNQGLDPFLDHHRVRQEACLELLRNLCDYAVVVQDPP 325
           L  LQ+    +G DP + H  + +E  +EL RNL   A VV+  P
Sbjct: 284 LEELQQKVSYKG-DPIVQHRPMLEERIVELFRNLMKSAFVVERQP 327

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>MLO10_ARATH (Q9FKY5) MLO-like protein 10 (AtMlo10)|
          Length = 569

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 166 DSGRASYLPCPSPGTHAQSGT 228
           +   AS LPCP+P TH Q  T
Sbjct: 112 EKAAASMLPCPAPSTHDQDKT 132

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>MURB_CLOPE (Q8XNI0) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 304

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
 Frame = -1

Query: 355 EAAIVRIMKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKR---IESLIEREFLE----R 197
           +  +  ++KS RV+D N  +  +TK+       + +V+KK    IE+ +E E  E    +
Sbjct: 145 DGEMAHVIKSARVIDENCNIKNLTKEELELGYRSSIVMKKGYVVIEATVELESGEYASIK 204

Query: 196 DKVD 185
           DK+D
Sbjct: 205 DKID 208

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>SOX15_HUMAN (O60248) SOX-15 protein (SOX-20 protein) (SOX-12 protein)|
          Length = 233

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 314 GPQQHSHRGYEAAPGTLPAE 255
           GPQ+    G  AAPGTLP E
Sbjct: 28  GPQEREGAGSPAAPGTLPLE 47

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>SEM5A_HUMAN (Q13591) Semaphorin-5A precursor (Semaphorin F) (Sema F)|
          Length = 1074

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 163 QDSGRASYLPCPSPGTHAQSGT 228
           Q++ R+++LP P+P  H Q GT
Sbjct: 338 QENSRSAWLPYPNPNPHFQCGT 359

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>ZAP1_YEAST (P47043) Zinc-responsive transcriptional regulator ZAP1|
          Length = 880

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
 Frame = +2

Query: 98  HGFCSFVHGQS-NVSTAKET*LRKIAVELPIYLVPLQELTLN-QGLDPFLDHHRVRQEAC 271
           H +C F    + N   +K   L     +LP     L++ T   QG +     H +  +  
Sbjct: 320 HKYCKFCEESTDNQPCSKHMHLESKPPQLPPKCSSLRKPTNTLQGTNHAYHEHILNTDMD 379

Query: 272 LELLRNLCDYAVVVQDPPGLHDPHDGGLNLG 364
           L++L +LC+ + + + P G H  H    N G
Sbjct: 380 LKILEDLCNISSLYEVPFGKHINHHDHNNAG 410

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>NUOG_SHEON (Q8EI34) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G)
          Length = 909

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 218 NQGLDPFLDHHRVRQEACLELLRNLCDYAVVVQDPPGLHDPHD 346
           NQ L PF++H   R  AC   +R   DYA    +  G++  HD
Sbjct: 137 NQDLGPFINHEMNRCIACYRCVRYYKDYA--GGEDLGVYGAHD 177

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>SYFB_RICTY (Q68WW1) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 815

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 38  KPHDSAEELQPRSKSTVPGRHGFCSFVHGQSNVSTAKET*LRKIAVELP 184
           KPH SA++L+     T   ++G    V G SNV    +  L  I +E+P
Sbjct: 54  KPHPSADKLKLCDVET---KNGILQIVCGASNVRADIKVVLANIGIEIP 99

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>SYFB_RICPR (Q9ZDB4) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 815

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 38  KPHDSAEELQPRSKSTVPGRHGFCSFVHGQSNVSTAKET*LRKIAVELP 184
           KPH SA++L+     T   ++G    V G SNV    +  L  I +E+P
Sbjct: 54  KPHPSADKLKLCDVET---KNGILQIVCGASNVRADIKVVLANIGIEIP 99

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>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
           (Voltage-gated calcium channel alpha subunit Cav2.2)
           (Calcium channel, L type, alpha-1 polypeptide isoform 5)
           (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -3

Query: 362 PD*GRHRED-HEVQEGPGP--QQHSHRGYEAAPGTLPAEPGGDQEK 234
           P  G+ R D  E  EG  P  + H HR  + AP T+P+   G+Q++
Sbjct: 830 PPGGKSRPDGSEAPEGADPPRRHHRHRDKDKAPATVPS--AGEQDR 873

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>ENV_CAEVG (P31627) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Leader peptide; Surface protein; Transmembrane protein]
          Length = 942

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 267 RAWSCFVTSVTMLLWSRTLLDFMILTMAASIW 362
           RAW  +  S     W R+LL  +IL +   IW
Sbjct: 886 RAWELWQNSPWKEPWKRSLLKLLILPLTMGIW 917

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>STAT3_RAT (P52631) Signal transducer and activator of transcription 3|
          Length = 770

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 191 LVPLQELTLNQGLDPFLDHHRVRQEACLELLRNLCDYAVVVQDPP 325
           L  LQ+    +G DP + H  + +E  ++L RNL   A VV+  P
Sbjct: 284 LEELQQKVSYKG-DPIVQHRPMLEERIVDLFRNLMKSAFVVERQP 327

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>PURL_ENTFA (Q833Y9) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 739

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 230 DPFLDHHRVRQEACLELLRNLCDYAVVVQD 319
           DPF++  ++  EACL+L++N  D  + +QD
Sbjct: 246 DPFME--KLLLEACLDLIKNHQDILIGIQD 273

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>SACY_BACSU (P15401) Levansucrase and sucrase synthesis operon antiterminator|
          Length = 280

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -1

Query: 334 MKSRRVLDHNSIVTEVTKQLQARFLPNPVVIKKRIE----SLIEREFLERDKVDRKLY 173
           MK +R+L+HN+IV +   + +          KK+ +    S IE+ F+ +D  D K +
Sbjct: 1   MKIKRILNHNAIVVKDQNEEKILLGAGIAFNKKKNDIVDPSKIEKTFIRKDTPDYKQF 58

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>NUOG_SHIFL (Q7UC56) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G)
          Length = 907

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 218 NQGLDPFLDHHRVRQEACLELLRNLCDYA 304
           NQ L PF+ H   R  AC   +R   DYA
Sbjct: 136 NQDLGPFISHEMNRCIACYRCVRYYKDYA 164

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>NUOG_SALTY (P0A1Y4) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G)
          Length = 907

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 218 NQGLDPFLDHHRVRQEACLELLRNLCDYA 304
           NQ L PF+ H   R  AC   +R   DYA
Sbjct: 136 NQDLGPFISHEMNRCIACYRCVRYYKDYA 164

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>NUOG_SALTI (P0A1Y5) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G)
          Length = 907

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 218 NQGLDPFLDHHRVRQEACLELLRNLCDYA 304
           NQ L PF+ H   R  AC   +R   DYA
Sbjct: 136 NQDLGPFISHEMNRCIACYRCVRYYKDYA 164

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>NUOG_ECOLI (P33602) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G) (NUO7)
          Length = 907

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 218 NQGLDPFLDHHRVRQEACLELLRNLCDYA 304
           NQ L PF+ H   R  AC   +R   DYA
Sbjct: 136 NQDLGPFISHEMNRCIACYRCVRYYKDYA 164

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>NUOG_ECOL6 (Q8FFJ9) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G)
          Length = 907

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 218 NQGLDPFLDHHRVRQEACLELLRNLCDYA 304
           NQ L PF+ H   R  AC   +R   DYA
Sbjct: 136 NQDLGPFISHEMNRCIACYRCVRYYKDYA 164

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>NUOG_ECO57 (Q8XCX2) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G)
          Length = 907

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 218 NQGLDPFLDHHRVRQEACLELLRNLCDYA 304
           NQ L PF+ H   R  AC   +R   DYA
Sbjct: 136 NQDLGPFISHEMNRCIACYRCVRYYKDYA 164

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>NUOG_YERPE (Q8ZDL2) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G)
          Length = 914

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 218 NQGLDPFLDHHRVRQEACLELLRNLCDYA 304
           NQ L PF+ H   R  AC   +R   DYA
Sbjct: 137 NQDLGPFISHEMNRCIACYRCVRYYKDYA 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,000,290
Number of Sequences: 219361
Number of extensions: 1036534
Number of successful extensions: 3363
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 3226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3359
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result