ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9l24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YL392_YEAST (P18634) Hypothetical 59.8 kDa protein in SSR1-ATP10... 34 0.38
2INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR... 31 3.2
3TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42 30 5.5
4ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21... 29 9.4

>YL392_YEAST (P18634) Hypothetical 59.8 kDa protein in SSR1-ATP10 intergenic|
           region
          Length = 518

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 22/76 (28%), Positives = 39/76 (51%)
 Frame = -3

Query: 503 AQVKLMEKIQLPEVEKDQPSQDGNEVEERNDGGLLNCRRSRRGKQSTKLKDLTSLYN*QK 324
           + +KL+E I L +++ ++P  D NE+ E  DG +  C    R K    L+ L       +
Sbjct: 391 SSLKLIE-IDLNQLKSNKPLLDLNEIRENFDGSMFEC--ELRLKDHPILRKLVFNEEDYR 447

Query: 323 HLEHRMWSQGCCPVKK 276
           H  +R++S   C +K+
Sbjct: 448 HRGNRLYSFKTCTIKR 463



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>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220|
           antigen) [Contains: Insulin receptor alpha subunit;
           Insulin receptor beta subunit]
          Length = 1382

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
 Frame = +1

Query: 118 FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFL------C 273
           F++ QD  H  + S +  C Q V+ N  CIP+    S +T  N++     P L      C
Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPE--CPSGYT-MNSSNLLCTPCLGPCPKVC 339

Query: 274 HFFTGQQPCDHI 309
           H   G++  D +
Sbjct: 340 HLLEGEKTIDSV 351



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>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42|
          Length = 723

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = +1

Query: 139 SKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQPCDHIRCS 318
           S +T+++       +D +  IP N    SH   +           H F    PC+H  C 
Sbjct: 114 SSKTALRTGSSDTQVDEVKSIPAN----SHLVNHLNCPMCSRLRLHSF--MLPCNHSLCE 167

Query: 319 KCFCQL*R---LVKSFSFVLC 372
           KC  QL +   + ++F  ++C
Sbjct: 168 KCLRQLQKHAEVTENFFILIC 188



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>ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21 (Protein POTE)|
           (Prostate, ovary, testis expressed protein)
          Length = 584

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
 Frame = +2

Query: 203 HKITFRVLIHHKMQPEASFFHSCVISSLDSNLATTYDAPNASVNCKGSSSPSASCFAFLV 382
           H  +F  ++  KM         C   S  SN+ T+ D  N+ +    S      C  F  
Sbjct: 49  HDDSFMKMLRSKMGKCCRHCFPCCRGSGTSNVGTSGDHENSFMKMLRSKMGKWCCHCFPC 108

Query: 383 ETYGSSANL-------HHFFPQPRFHLGLVDLFQL 466
               S +N+       H  F +PR+H+   DL +L
Sbjct: 109 CRGSSKSNVGAWGDYDHSAFMEPRYHVRREDLDKL 143


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,146,746
Number of Sequences: 219361
Number of extensions: 1351239
Number of successful extensions: 4003
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4002
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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