Clone Name | rbags9l24 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YL392_YEAST (P18634) Hypothetical 59.8 kDa protein in SSR1-ATP10... | 34 | 0.38 | 2 | INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR... | 31 | 3.2 | 3 | TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42 | 30 | 5.5 | 4 | ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21... | 29 | 9.4 |
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>YL392_YEAST (P18634) Hypothetical 59.8 kDa protein in SSR1-ATP10 intergenic| region Length = 518 Score = 33.9 bits (76), Expect = 0.38 Identities = 22/76 (28%), Positives = 39/76 (51%) Frame = -3 Query: 503 AQVKLMEKIQLPEVEKDQPSQDGNEVEERNDGGLLNCRRSRRGKQSTKLKDLTSLYN*QK 324 + +KL+E I L +++ ++P D NE+ E DG + C R K L+ L + Sbjct: 391 SSLKLIE-IDLNQLKSNKPLLDLNEIRENFDGSMFEC--ELRLKDHPILRKLVFNEEDYR 447 Query: 323 HLEHRMWSQGCCPVKK 276 H +R++S C +K+ Sbjct: 448 HRGNRLYSFKTCTIKR 463
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 30.8 bits (68), Expect = 3.2 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 8/72 (11%) Frame = +1 Query: 118 FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFL------C 273 F++ QD H + S + C Q V+ N CIP+ S +T N++ P L C Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPE--CPSGYT-MNSSNLLCTPCLGPCPKVC 339 Query: 274 HFFTGQQPCDHI 309 H G++ D + Sbjct: 340 HLLEGEKTIDSV 351
>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42| Length = 723 Score = 30.0 bits (66), Expect = 5.5 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = +1 Query: 139 SKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQPCDHIRCS 318 S +T+++ +D + IP N SH + H F PC+H C Sbjct: 114 SSKTALRTGSSDTQVDEVKSIPAN----SHLVNHLNCPMCSRLRLHSF--MLPCNHSLCE 167 Query: 319 KCFCQL*R---LVKSFSFVLC 372 KC QL + + ++F ++C Sbjct: 168 KCLRQLQKHAEVTENFFILIC 188
>ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21 (Protein POTE)| (Prostate, ovary, testis expressed protein) Length = 584 Score = 29.3 bits (64), Expect = 9.4 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 7/95 (7%) Frame = +2 Query: 203 HKITFRVLIHHKMQPEASFFHSCVISSLDSNLATTYDAPNASVNCKGSSSPSASCFAFLV 382 H +F ++ KM C S SN+ T+ D N+ + S C F Sbjct: 49 HDDSFMKMLRSKMGKCCRHCFPCCRGSGTSNVGTSGDHENSFMKMLRSKMGKWCCHCFPC 108 Query: 383 ETYGSSANL-------HHFFPQPRFHLGLVDLFQL 466 S +N+ H F +PR+H+ DL +L Sbjct: 109 CRGSSKSNVGAWGDYDHSAFMEPRYHVRREDLDKL 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,146,746 Number of Sequences: 219361 Number of extensions: 1351239 Number of successful extensions: 4003 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3757 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4002 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)