Clone Name | rbags9l23 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CN130_HUMAN (Q8N806) Protein C14orf130 | 55 | 2e-07 | 2 | CN130_MOUSE (Q8BU04) Protein C14orf130 homolog | 54 | 5e-07 | 3 | LEU1_LEPIN (Q8F445) 2-isopropylmalate synthase (EC 2.3.3.13) (Al... | 31 | 3.1 | 4 | LEU1_LEPIC (Q72RL9) 2-isopropylmalate synthase (EC 2.3.3.13) (Al... | 31 | 3.1 |
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>CN130_HUMAN (Q8N806) Protein C14orf130| Length = 425 Score = 55.1 bits (131), Expect = 2e-07 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%) Frame = -3 Query: 605 LCKCGTCTNFYAQRGIAHLTDKEDSIEEYE---KIAXXXXXXXXXXXEGAEANFINSLDH 435 LC C C Y + LTD+ D++ YE KIA + ++S++ Sbjct: 313 LCTCQDCMKMYGDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPL------MDTLSSMNR 366 Query: 434 VQKIEILSGINDMKNEFQSFMESF-DPSKTVTSDDVQSIFKNLARKKQR 291 VQ++E++ ND+K E + +++ F D V +D+Q F+ KK+R Sbjct: 367 VQQVELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRR 415
>CN130_MOUSE (Q8BU04) Protein C14orf130 homolog| Length = 425 Score = 53.9 bits (128), Expect = 5e-07 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%) Frame = -3 Query: 605 LCKCGTCTNFYAQRGIAHLTDKEDSIEEYEKIAXXXXXXXXXXXEGAEANFINSLDHVQK 426 LC C C Y + + LTD+ D++ YE + ++S++ VQ+ Sbjct: 313 LCTCQDCMKMYGELDVLFLTDECDTVLAYEN---KGKNDQATDRRDPLMDTLSSMNRVQQ 369 Query: 425 IEILSGINDMKNEFQSFMESF-DPSKTVTSDDVQSIFKNLARKKQR 291 +E++ ND+K E + +++ F D V +D+Q F+ KK+R Sbjct: 370 VELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRR 415
>LEU1_LEPIN (Q8F445) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 501 Score = 31.2 bits (69), Expect = 3.1 Identities = 12/47 (25%), Positives = 26/47 (55%) Frame = -3 Query: 440 DHVQKIEILSGINDMKNEFQSFMESFDPSKTVTSDDVQSIFKNLARK 300 D + K+ + +++ +Q F+E D K + +D++++F ARK Sbjct: 341 DRIVKLGFSPQVEELEAAYQRFLEIADRKKEIYDEDIRALFSEEARK 387
>LEU1_LEPIC (Q72RL9) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 501 Score = 31.2 bits (69), Expect = 3.1 Identities = 12/47 (25%), Positives = 26/47 (55%) Frame = -3 Query: 440 DHVQKIEILSGINDMKNEFQSFMESFDPSKTVTSDDVQSIFKNLARK 300 D + K+ + +++ +Q F+E D K + +D++++F ARK Sbjct: 341 DRIVKLGFSPQVEELEAAYQRFLEIADRKKEIYDEDIRALFSEEARK 387 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,788,781 Number of Sequences: 219361 Number of extensions: 1751916 Number of successful extensions: 4419 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4297 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4418 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)