Clone Name | rbags9k13 |
---|---|
Clone Library Name | barley_pub |
>gb|AY112602.1| Zea mays CL6289_1 mRNA sequence Length = 1769 Score = 329 bits (166), Expect = 7e-87 Identities = 370/440 (84%) Strand = Plus / Minus Query: 241 tcagaaccctgacatggcgtagtccatggcgtccaccaagaaatctgcgtcgtccttgga 300 ||||| || |||||| ||||||||||||| |||||||||||| ||||| |||||||| || Sbjct: 1504 tcagagccttgacattgcgtagtccatggagtccaccaagaagtctgcatcgtccttcga 1445 Query: 301 gaagcacatcggtggttttatcctgaagacgttgccgtgcagaccgcctttgccgagtag 360 |||||||||||||||||||| ||||||||||| || ||||||||||| || || | ||| Sbjct: 1444 aaagcacatcggtggttttattctgaagacgttaccatgcagaccgccctttccaactag 1385 Query: 361 aacgccgagatctttgagtttctcaaacagaacagcggtctcagccttggccggtgtctt 420 || ||||||||| |||| ||||||||||| || ||| || | |||||| || ||||| Sbjct: 1384 taccccgagatctctgagcttctcaaacagttcaatggtttctgacttggcaggggtctt 1325 Query: 421 ctccgtcctgtcagtgacgagctccaccccaagcatcagccctcttcctctgacatctcc 480 |||| | ||| | || ||||| ||||||||||||||||| || |||||||| ||||| || Sbjct: 1324 ctcctttctgcccgtaacgagttccaccccaagcatcagtccccttcctctaacatcacc 1265 Query: 481 aatgatttcatgcttctgctgaagcgacttcagacgttccaccaagtgagtgccgacatc 540 |||||||| ||||||| ||||||||| || ||||| |||| |||||||| || ||||| Sbjct: 1264 tatgatttcgtgcttctcctgaagcgattttagacgctccaacaagtgagatccaacatc 1205 Query: 541 tgcgcaatgcgcctggcgtttctccttgtcaagaaccttaagcacagccaatccaccagc 600 || ||||| |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1204 agcacaatgtgcctggcgtttctccttgtcaagaaccttaagcacagctaacccaccagc 1145 Query: 601 agaacagactgggttcccaccgaatgtgttgaactggatcttctgagccatcacgctagc 660 |||||| ||||| || ||||| |||||||| || |||| |||| | ||| || || Sbjct: 1144 agaacaaactggatttccaccaaatgtgttaaattggannnnnngagctaacacacttgc 1085 Query: 661 aatctcaggagttgttacaa 680 ||||||||||||||| |||| Sbjct: 1084 aatctcaggagttgtcacaa 1065
>dbj|AK105642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-E11, full insert sequence Length = 2025 Score = 293 bits (148), Expect = 4e-76 Identities = 397/480 (82%) Strand = Plus / Minus Query: 240 ctcagaaccctgacatggcgtagtccatggcgtccaccaagaaatctgcgtcgtccttgg 299 |||||| ||||||||| || ||||||||||| ||||||| | ||||||| || ||| | | Sbjct: 1655 ctcagagccctgacattgcatagtccatggcatccaccaggtaatctgcatcatcccttg 1596 Query: 300 agaagcacatcggtggttttatcctgaagacgttgccgtgcagaccgcctttgccgagta 359 |||||||| |||||||||||||||||||| || || |||||||| ||||| || | || Sbjct: 1595 taaagcacattggtggttttatcctgaagacattaccatgcagaccaccttttccaacta 1536 Query: 360 gaacgccgagatctttgagtttctcaaacagaacagcggtctcagccttggccggtgtct 419 || | |||||| |||||||||||||||| | | |||||| |||||||| ||||||| Sbjct: 1535 aaatgttgagatccttgagtttctcaaacaataaattggtctcggccttggcaggtgtct 1476 Query: 420 tctccgtcctgtcagtgacgagctccaccccaagcatcagccctcttcctctgacatctc 479 ||||| |||| || || || ||||||||||||||||||| || || ||||| ||||||| Sbjct: 1475 tctccttcctatcggtaacaagctccaccccaagcatcaatcccctccctctaacatctc 1416 Query: 480 caatgatttcatgcttctgctgaagcgacttcagacgttccaccaagtgagtgccgacat 539 |||||||||||||||| ||||| ||| || ||||| | |||||| |||| || |||| Sbjct: 1415 caatgatttcatgcttttgctggagctcttttagacgattcaccaaatgagatccaacat 1356 Query: 540 ctgcgcaatgcgcctggcgtttctccttgtcaagaaccttaagcacagccaatccaccag 599 | || ||||| ||||||||||||||||||||||||||||| |||||||| | ||||||| Sbjct: 1355 cagcacaatgtgcctggcgtttctccttgtcaagaaccttgagcacagcaagtccaccaa 1296 Query: 600 cagaacagactgggttcccaccgaatgtgttgaactggatcttctgagccatcacgctag 659 | || || || ||||| ||||| |||||||| || ||||| || || |||| ||| | | Sbjct: 1295 cggagcaaacagggtttccaccaaatgtgttaaattggattttttgcgccagcacatttg 1236 Query: 660 caatctcaggagttgttacaactgcaccgagtggtagaccattaccgattccctttgcca 719 ||||||| || |||||||||||||| || | |||||||||||| || ||||||||||||| Sbjct: 1235 caatctcgggtgttgttacaactgcccccaatggtagaccatttccaattccctttgcca 1176
>dbj|AK061079.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E11, full insert sequence Length = 1845 Score = 293 bits (148), Expect = 4e-76 Identities = 397/480 (82%) Strand = Plus / Minus Query: 240 ctcagaaccctgacatggcgtagtccatggcgtccaccaagaaatctgcgtcgtccttgg 299 |||||| ||||||||| || ||||||||||| ||||||| | ||||||| || ||| | | Sbjct: 1520 ctcagagccctgacattgcatagtccatggcatccaccaggtaatctgcatcatcccttg 1461 Query: 300 agaagcacatcggtggttttatcctgaagacgttgccgtgcagaccgcctttgccgagta 359 |||||||| |||||||||||||||||||| || || |||||||| ||||| || | || Sbjct: 1460 taaagcacattggtggttttatcctgaagacattaccatgcagaccaccttttccaacta 1401 Query: 360 gaacgccgagatctttgagtttctcaaacagaacagcggtctcagccttggccggtgtct 419 || | |||||| |||||||||||||||| | | |||||| |||||||| ||||||| Sbjct: 1400 aaatgttgagatccttgagtttctcaaacaataaattggtctcggccttggcaggtgtct 1341 Query: 420 tctccgtcctgtcagtgacgagctccaccccaagcatcagccctcttcctctgacatctc 479 ||||| |||| || || || ||||||||||||||||||| || || ||||| ||||||| Sbjct: 1340 tctccttcctatcggtaacaagctccaccccaagcatcaatcccctccctctaacatctc 1281 Query: 480 caatgatttcatgcttctgctgaagcgacttcagacgttccaccaagtgagtgccgacat 539 |||||||||||||||| ||||| ||| || ||||| | |||||| |||| || |||| Sbjct: 1280 caatgatttcatgcttttgctggagctcttttagacgattcaccaaatgagatccaacat 1221 Query: 540 ctgcgcaatgcgcctggcgtttctccttgtcaagaaccttaagcacagccaatccaccag 599 | || ||||| ||||||||||||||||||||||||||||| |||||||| | ||||||| Sbjct: 1220 cagcacaatgtgcctggcgtttctccttgtcaagaaccttgagcacagcaagtccaccaa 1161 Query: 600 cagaacagactgggttcccaccgaatgtgttgaactggatcttctgagccatcacgctag 659 | || || || ||||| ||||| |||||||| || ||||| || || |||| ||| | | Sbjct: 1160 cggagcaaacagggtttccaccaaatgtgttaaattggattttttgcgccagcacatttg 1101 Query: 660 caatctcaggagttgttacaactgcaccgagtggtagaccattaccgattccctttgcca 719 ||||||| || |||||||||||||| || | |||||||||||| || ||||||||||||| Sbjct: 1100 caatctcgggtgttgttacaactgcccccaatggtagaccatttccaattccctttgcca 1041
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 127 bits (64), Expect = 5e-26 Identities = 187/228 (82%) Strand = Plus / Minus Query: 486 tttcatgcttctgctgaagcgacttcagacgttccaccaagtgagtgccgacatctgcgc 545 |||||||||| ||||| ||| || ||||| | |||||| |||| || ||||| || | Sbjct: 3839040 tttcatgcttttgctggagctcttttagacgattcaccaaatgagatccaacatcagcac 3838981 Query: 546 aatgcgcctggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaac 605 |||| ||||||||||||||||||||||||||||| |||||||| | ||||||| | || | Sbjct: 3838980 aatgtgcctggcgtttctccttgtcaagaaccttgagcacagcaagtccaccaacggagc 3838921 Query: 606 agactgggttcccaccgaatgtgttgaactggatcttctgagccatcacgctagcaatct 665 | || ||||| ||||| |||||||| || ||||| || || |||| ||| | ||||||| Sbjct: 3838920 aaacagggtttccaccaaatgtgttaaattggattttttgcgccagcacatttgcaatct 3838861 Query: 666 caggagttgttacaactgcaccgagtggtagaccattaccgattccct 713 | || |||||||||||||| || | |||||||||||| || ||||||| Sbjct: 3838860 cgggtgttgttacaactgcccccaatggtagaccatttccaattccct 3838813 Score = 87.7 bits (44), Expect = 5e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 374 ttgagtttctcaaacagaacagcggtctcagccttggccggtgtcttctccgtcctgtca 433 |||||||||||||||| | | |||||| |||||||| |||||||||||| |||| || Sbjct: 3839326 ttgagtttctcaaacaataaattggtctcggccttggcaggtgtcttctccttcctatcg 3839267 Query: 434 gtgacgagctccaccccaagcatcagccctcttcctctgacatctccaatga 485 || || ||||||||||||||||||| || || ||||| ||||||||||||| Sbjct: 3839266 gtaacaagctccaccccaagcatcaatcccctccctctaacatctccaatga 3839215 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 302 aagcacatcggtggttttatcctgaagacgttgccgtgcagaccgccttt 351 |||||||| |||||||||||||||||||| || || |||||||| ||||| Sbjct: 3839499 aagcacattggtggttttatcctgaagacattaccatgcagaccaccttt 3839450 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 240 ctcagaaccctgacatggcgtagtccatggcgtccaccaagaaatctgc 288 |||||| ||||||||| || ||||||||||| ||||||| | ||||||| Sbjct: 3839644 ctcagagccctgacattgcatagtccatggcatccaccaggtaatctgc 3839596
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 127 bits (64), Expect = 5e-26 Identities = 187/228 (82%) Strand = Plus / Minus Query: 486 tttcatgcttctgctgaagcgacttcagacgttccaccaagtgagtgccgacatctgcgc 545 |||||||||| ||||| ||| || ||||| | |||||| |||| || ||||| || | Sbjct: 117664 tttcatgcttttgctggagctcttttagacgattcaccaaatgagatccaacatcagcac 117605 Query: 546 aatgcgcctggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaac 605 |||| ||||||||||||||||||||||||||||| |||||||| | ||||||| | || | Sbjct: 117604 aatgtgcctggcgtttctccttgtcaagaaccttgagcacagcaagtccaccaacggagc 117545 Query: 606 agactgggttcccaccgaatgtgttgaactggatcttctgagccatcacgctagcaatct 665 | || ||||| ||||| |||||||| || ||||| || || |||| ||| | ||||||| Sbjct: 117544 aaacagggtttccaccaaatgtgttaaattggattttttgcgccagcacatttgcaatct 117485 Query: 666 caggagttgttacaactgcaccgagtggtagaccattaccgattccct 713 | || |||||||||||||| || | |||||||||||| || ||||||| Sbjct: 117484 cgggtgttgttacaactgcccccaatggtagaccatttccaattccct 117437 Score = 87.7 bits (44), Expect = 5e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 374 ttgagtttctcaaacagaacagcggtctcagccttggccggtgtcttctccgtcctgtca 433 |||||||||||||||| | | |||||| |||||||| |||||||||||| |||| || Sbjct: 117950 ttgagtttctcaaacaataaattggtctcggccttggcaggtgtcttctccttcctatcg 117891 Query: 434 gtgacgagctccaccccaagcatcagccctcttcctctgacatctccaatga 485 || || ||||||||||||||||||| || || ||||| ||||||||||||| Sbjct: 117890 gtaacaagctccaccccaagcatcaatcccctccctctaacatctccaatga 117839 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 302 aagcacatcggtggttttatcctgaagacgttgccgtgcagaccgccttt 351 |||||||| |||||||||||||||||||| || || |||||||| ||||| Sbjct: 118123 aagcacattggtggttttatcctgaagacattaccatgcagaccaccttt 118074 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 240 ctcagaaccctgacatggcgtagtccatggcgtccaccaagaaatctgc 288 |||||| ||||||||| || ||||||||||| ||||||| | ||||||| Sbjct: 118268 ctcagagccctgacattgcatagtccatggcatccaccaggtaatctgc 118220
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 127 bits (64), Expect = 5e-26 Identities = 187/228 (82%) Strand = Plus / Minus Query: 486 tttcatgcttctgctgaagcgacttcagacgttccaccaagtgagtgccgacatctgcgc 545 |||||||||| ||||| ||| || ||||| | |||||| |||| || ||||| || | Sbjct: 3839151 tttcatgcttttgctggagctcttttagacgattcaccaaatgagatccaacatcagcac 3839092 Query: 546 aatgcgcctggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaac 605 |||| ||||||||||||||||||||||||||||| |||||||| | ||||||| | || | Sbjct: 3839091 aatgtgcctggcgtttctccttgtcaagaaccttgagcacagcaagtccaccaacggagc 3839032 Query: 606 agactgggttcccaccgaatgtgttgaactggatcttctgagccatcacgctagcaatct 665 | || ||||| ||||| |||||||| || ||||| || || |||| ||| | ||||||| Sbjct: 3839031 aaacagggtttccaccaaatgtgttaaattggattttttgcgccagcacatttgcaatct 3838972 Query: 666 caggagttgttacaactgcaccgagtggtagaccattaccgattccct 713 | || |||||||||||||| || | |||||||||||| || ||||||| Sbjct: 3838971 cgggtgttgttacaactgcccccaatggtagaccatttccaattccct 3838924 Score = 87.7 bits (44), Expect = 5e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 374 ttgagtttctcaaacagaacagcggtctcagccttggccggtgtcttctccgtcctgtca 433 |||||||||||||||| | | |||||| |||||||| |||||||||||| |||| || Sbjct: 3839437 ttgagtttctcaaacaataaattggtctcggccttggcaggtgtcttctccttcctatcg 3839378 Query: 434 gtgacgagctccaccccaagcatcagccctcttcctctgacatctccaatga 485 || || ||||||||||||||||||| || || ||||| ||||||||||||| Sbjct: 3839377 gtaacaagctccaccccaagcatcaatcccctccctctaacatctccaatga 3839326 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 302 aagcacatcggtggttttatcctgaagacgttgccgtgcagaccgccttt 351 |||||||| |||||||||||||||||||| || || |||||||| ||||| Sbjct: 3839610 aagcacattggtggttttatcctgaagacattaccatgcagaccaccttt 3839561 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 240 ctcagaaccctgacatggcgtagtccatggcgtccaccaagaaatctgc 288 |||||| ||||||||| || ||||||||||| ||||||| | ||||||| Sbjct: 3839755 ctcagagccctgacattgcatagtccatggcatccaccaggtaatctgc 3839707
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 127 bits (64), Expect = 5e-26 Identities = 187/228 (82%) Strand = Plus / Minus Query: 486 tttcatgcttctgctgaagcgacttcagacgttccaccaagtgagtgccgacatctgcgc 545 |||||||||| ||||| ||| || ||||| | |||||| |||| || ||||| || | Sbjct: 45513 tttcatgcttttgctggagctcttttagacgattcaccaaatgagatccaacatcagcac 45454 Query: 546 aatgcgcctggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaac 605 |||| ||||||||||||||||||||||||||||| |||||||| | ||||||| | || | Sbjct: 45453 aatgtgcctggcgtttctccttgtcaagaaccttgagcacagcaagtccaccaacggagc 45394 Query: 606 agactgggttcccaccgaatgtgttgaactggatcttctgagccatcacgctagcaatct 665 | || ||||| ||||| |||||||| || ||||| || || |||| ||| | ||||||| Sbjct: 45393 aaacagggtttccaccaaatgtgttaaattggattttttgcgccagcacatttgcaatct 45334 Query: 666 caggagttgttacaactgcaccgagtggtagaccattaccgattccct 713 | || |||||||||||||| || | |||||||||||| || ||||||| Sbjct: 45333 cgggtgttgttacaactgcccccaatggtagaccatttccaattccct 45286 Score = 87.7 bits (44), Expect = 5e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 374 ttgagtttctcaaacagaacagcggtctcagccttggccggtgtcttctccgtcctgtca 433 |||||||||||||||| | | |||||| |||||||| |||||||||||| |||| || Sbjct: 45799 ttgagtttctcaaacaataaattggtctcggccttggcaggtgtcttctccttcctatcg 45740 Query: 434 gtgacgagctccaccccaagcatcagccctcttcctctgacatctccaatga 485 || || ||||||||||||||||||| || || ||||| ||||||||||||| Sbjct: 45739 gtaacaagctccaccccaagcatcaatcccctccctctaacatctccaatga 45688 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 302 aagcacatcggtggttttatcctgaagacgttgccgtgcagaccgccttt 351 |||||||| |||||||||||||||||||| || || |||||||| ||||| Sbjct: 45972 aagcacattggtggttttatcctgaagacattaccatgcagaccaccttt 45923 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 240 ctcagaaccctgacatggcgtagtccatggcgtccaccaagaaatctgc 288 |||||| ||||||||| || ||||||||||| ||||||| | ||||||| Sbjct: 46117 ctcagagccctgacattgcatagtccatggcatccaccaggtaatctgc 46069
>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence Length = 126187 Score = 91.7 bits (46), Expect = 3e-15 Identities = 124/150 (82%) Strand = Plus / Minus Query: 526 gtgagtgccgacatctgcgcaatgcgcctggcgtttctccttgtcaagaaccttaagcac 585 ||||| ||| ||||| |||||||| ||||| || ||||| || || |||||||| ||||| Sbjct: 11751 gtgagagccaacatcagcgcaatgagcctgccgcttctcgttatccagaaccttgagcac 11692 Query: 586 agccaatccaccagcagaacagactgggttcccaccgaatgtgttgaactggatcttctg 645 || | ||| || |||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 11691 tgcaagtcccccggcagaacatacggggttcccaccaaatgtattgaattgaatcttctg 11632 Query: 646 agccatcacgctagcaatctcaggagttgt 675 |||||||| || ||||| || |||||||| Sbjct: 11631 ggccatcacacttgcaatttctggagttgt 11602
>ref|NM_120126.2| Arabidopsis thaliana AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2); alanine-glyoxylate transaminase/ pyridoxal phosphate binding / transaminase AT4G39660 (AGT2) mRNA, complete cds Length = 1665 Score = 83.8 bits (42), Expect = 7e-13 Identities = 174/218 (79%) Strand = Plus / Minus Query: 275 accaagaaatctgcgtcgtccttggagaagcacatcggtggttttatcctgaagacgttg 334 |||||||||||||| || || || | ||| ||||| ||||| ||||||||||| ||||| Sbjct: 1421 accaagaaatctgcatcatctttagtgaaacacattggtggctttatcctgaaaacgttc 1362 Query: 335 ccgtgcagaccgcctttgccgagtagaacgccgagatctttgagtttctcaaacagaaca 394 || || || || ||||| |||| |||| ||| || ||| | |||| |||||||| ||| Sbjct: 1361 ccatgaagtcctccttttccgacgagaatgccaagttctctaagttgctcaaacaagaca 1302 Query: 395 gcggtctcagccttggccggtgtcttctccgtcctgtcagtgacgagctccaccccaagc 454 | || ||||||||||| |||||||| || ||| |||| | || ||||| | ||||| | Sbjct: 1301 gatgtttcagccttggctggtgtcttgtctttccggtcactcacaagctcaatcccaacc 1242 Query: 455 atcagccctcttcctctgacatctccaatgatttcatg 492 || | |||||||||||| || ||||||||||| ||||| Sbjct: 1241 attaaccctcttcctctcacgtctccaatgatatcatg 1204 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 554 tggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaacagactggg 613 |||||||||||||| |||| ||| || || || || | ||||||||| ||||| || ||| Sbjct: 1142 tggcgtttctccttatcaataacgtttagaaccgcaagtccaccagctgaacaaaccggg 1083 Query: 614 ttcccaccgaatgtgttgaac 634 |||||||| || ||||||||| Sbjct: 1082 ttcccaccaaaagtgttgaac 1062
>gb|AY054264.1| Arabidopsis thaliana AT4g39660/T19P19_50 mRNA, complete cds Length = 1676 Score = 83.8 bits (42), Expect = 7e-13 Identities = 174/218 (79%) Strand = Plus / Minus Query: 275 accaagaaatctgcgtcgtccttggagaagcacatcggtggttttatcctgaagacgttg 334 |||||||||||||| || || || | ||| ||||| ||||| ||||||||||| ||||| Sbjct: 1421 accaagaaatctgcatcatctttagtgaaacacattggtggctttatcctgaaaacgttc 1362 Query: 335 ccgtgcagaccgcctttgccgagtagaacgccgagatctttgagtttctcaaacagaaca 394 || || || || ||||| |||| |||| ||| || ||| | |||| |||||||| ||| Sbjct: 1361 ccatgaagtcctccttttccgacgagaatgccaagttctctaagttgctcaaacaagaca 1302 Query: 395 gcggtctcagccttggccggtgtcttctccgtcctgtcagtgacgagctccaccccaagc 454 | || ||||||||||| |||||||| || ||| |||| | || ||||| | ||||| | Sbjct: 1301 gatgtttcagccttggctggtgtcttgtctttccggtcactcacaagctcaatcccaacc 1242 Query: 455 atcagccctcttcctctgacatctccaatgatttcatg 492 || | |||||||||||| || ||||||||||| ||||| Sbjct: 1241 attaaccctcttcctctcacgtctccaatgatatcatg 1204 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 554 tggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaacagactggg 613 |||||||||||||| |||| ||| || || || || | ||||||||| ||||| || ||| Sbjct: 1142 tggcgtttctccttatcaataacgtttagaaccgcaagtccaccagctgaacaaaccggg 1083 Query: 614 ttcccaccgaatgtgttgaac 634 |||||||| || ||||||||| Sbjct: 1082 ttcccaccaaaagtgttgaac 1062
>gb|BT002306.1| Arabidopsis thaliana At4g39660/T19P19_50 mRNA, complete cds Length = 1431 Score = 83.8 bits (42), Expect = 7e-13 Identities = 174/218 (79%) Strand = Plus / Minus Query: 275 accaagaaatctgcgtcgtccttggagaagcacatcggtggttttatcctgaagacgttg 334 |||||||||||||| || || || | ||| ||||| ||||| ||||||||||| ||||| Sbjct: 1397 accaagaaatctgcatcatctttagtgaaacacattggtggctttatcctgaaaacgttc 1338 Query: 335 ccgtgcagaccgcctttgccgagtagaacgccgagatctttgagtttctcaaacagaaca 394 || || || || ||||| |||| |||| ||| || ||| | |||| |||||||| ||| Sbjct: 1337 ccatgaagtcctccttttccgacgagaatgccaagttctctaagttgctcaaacaagaca 1278 Query: 395 gcggtctcagccttggccggtgtcttctccgtcctgtcagtgacgagctccaccccaagc 454 | || ||||||||||| |||||||| || ||| |||| | || ||||| | ||||| | Sbjct: 1277 gatgtttcagccttggctggtgtcttgtctttccggtcactcacaagctcaatcccaacc 1218 Query: 455 atcagccctcttcctctgacatctccaatgatttcatg 492 || | |||||||||||| || ||||||||||| ||||| Sbjct: 1217 attaaccctcttcctctcacgtctccaatgatatcatg 1180 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 554 tggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaacagactggg 613 |||||||||||||| |||| ||| || || || || | ||||||||| ||||| || ||| Sbjct: 1118 tggcgtttctccttatcaataacgtttagaaccgcaagtccaccagctgaacaaaccggg 1059 Query: 614 ttcccaccgaatgtgttgaac 634 |||||||| || ||||||||| Sbjct: 1058 ttcccaccaaaagtgttgaac 1038
>gb|AF166351.1|AF166351 Arabidopsis thaliana alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA, complete cds Length = 1590 Score = 83.8 bits (42), Expect = 7e-13 Identities = 174/218 (79%) Strand = Plus / Minus Query: 275 accaagaaatctgcgtcgtccttggagaagcacatcggtggttttatcctgaagacgttg 334 |||||||||||||| || || || | ||| ||||| ||||| ||||||||||| ||||| Sbjct: 1402 accaagaaatctgcatcatctttagtgaaacacattggtggctttatcctgaaaacgttc 1343 Query: 335 ccgtgcagaccgcctttgccgagtagaacgccgagatctttgagtttctcaaacagaaca 394 || || || || ||||| |||| |||| ||| || ||| | |||| |||||||| ||| Sbjct: 1342 ccatgaagtcctccttttccgacgagaatgccaagttctctaagttgctcaaacaagaca 1283 Query: 395 gcggtctcagccttggccggtgtcttctccgtcctgtcagtgacgagctccaccccaagc 454 | || ||||||||||| |||||||| || ||| |||| | || ||||| | ||||| | Sbjct: 1282 gatgtttcagccttggctggtgtcttgtctttccggtcactcacaagctcaatcccaacc 1223 Query: 455 atcagccctcttcctctgacatctccaatgatttcatg 492 || | |||||||||||| || ||||||||||| ||||| Sbjct: 1222 attaaccctcttcctctcacgtctccaatgatatcatg 1185 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 554 tggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaacagactggg 613 |||||||||||||| |||| ||| || || || || | ||||||||| ||||| || ||| Sbjct: 1123 tggcgtttctccttatcaataacgtttagaaccgcaagtccaccagctgaacaaaccggg 1064 Query: 614 ttcccaccgaatgtgttgaac 634 |||||||| || ||||||||| Sbjct: 1063 ttcccaccaaaagtgttgaac 1043
>emb|BX828134.1|CNS0A2YM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1530 Score = 69.9 bits (35), Expect = 1e-08 Identities = 174/219 (79%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 275 accaagaaatctgcgtcgtccttggagaagc-acatcggtggttttatcctgaagacgtt 333 |||||||||||||| || || || | ||| | |||| ||||| ||||||||||| ||||| Sbjct: 1397 accaagaaatctgcatcatctttagtgaaacgacattggtggctttatcctgaaaacgtt 1338 Query: 334 gccgtgcagaccgcctttgccgagtagaacgccgagatctttgagtttctcaaacagaac 393 || || || || ||||| |||| |||| ||| || ||| | |||| |||||||| || Sbjct: 1337 cccatgaagtcctccttttccgacgagaatgccaagttctctaagttgctcaaacaagac 1278 Query: 394 agcggtctcagccttggccggtgtcttctccgtcctgtcagtgacgagctccaccccaag 453 || || ||||||||||| |||||||| || ||| |||| | || ||||| | ||||| Sbjct: 1277 agatgtttcagccttggctggtgtcttgtctttccggtcactcacaagctcaatcccaac 1218 Query: 454 catcagccctcttcctctgacatctccaatgatttcatg 492 ||| | |||||||||||| || ||||||||||| ||||| Sbjct: 1217 cattaaccctcttcctctcacgtctccaatgatatcatg 1179 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 554 tggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaacagactggg 613 |||||||||||||| |||| ||| || || || || | ||||||||| ||||| || ||| Sbjct: 1117 tggcgtttctccttatcaataacgtttagaaccgcaagtccaccagctgaacaaaccggg 1058 Query: 614 ttcccaccgaatgtgttgaac 634 |||||||| || ||||||||| Sbjct: 1057 ttcccaccaaaagtgttgaac 1037
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91 Length = 198151 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 554 tggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaacagactggg 613 |||||||||||||| |||| ||| || || || || | ||||||||| ||||| || ||| Sbjct: 128851 tggcgtttctccttatcaataacgtttagaaccgcaagtccaccagctgaacaaaccggg 128792 Query: 614 ttcccaccgaatgtgttgaac 634 |||||||| || ||||||||| Sbjct: 128791 ttcccaccaaaagtgttgaac 128771 Score = 50.1 bits (25), Expect = 0.010 Identities = 70/85 (82%) Strand = Plus / Minus Query: 401 tcagccttggccggtgtcttctccgtcctgtcagtgacgagctccaccccaagcatcagc 460 ||||||||||| |||||||| || ||| |||| | || ||||| | ||||| ||| | | Sbjct: 129079 tcagccttggctggtgtcttgtctttccggtcactcacaagctcaatcccaaccattaac 129020 Query: 461 cctcttcctctgacatctccaatga 485 ||||||||||| || |||||||||| Sbjct: 129019 cctcttcctctcacgtctccaatga 128995
>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project) Length = 129047 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 554 tggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaacagactggg 613 |||||||||||||| |||| ||| || || || || | ||||||||| ||||| || ||| Sbjct: 103637 tggcgtttctccttatcaataacgtttagaaccgcaagtccaccagctgaacaaaccggg 103578 Query: 614 ttcccaccgaatgtgttgaac 634 |||||||| || ||||||||| Sbjct: 103577 ttcccaccaaaagtgttgaac 103557 Score = 50.1 bits (25), Expect = 0.010 Identities = 70/85 (82%) Strand = Plus / Minus Query: 401 tcagccttggccggtgtcttctccgtcctgtcagtgacgagctccaccccaagcatcagc 460 ||||||||||| |||||||| || ||| |||| | || ||||| | ||||| ||| | | Sbjct: 103865 tcagccttggctggtgtcttgtctttccggtcactcacaagctcaatcccaaccattaac 103806 Query: 461 cctcttcctctgacatctccaatga 485 ||||||||||| || |||||||||| Sbjct: 103805 cctcttcctctcacgtctccaatga 103781
>emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project) Length = 88343 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 554 tggcgtttctccttgtcaagaaccttaagcacagccaatccaccagcagaacagactggg 613 |||||||||||||| |||| ||| || || || || | ||||||||| ||||| || ||| Sbjct: 11821 tggcgtttctccttatcaataacgtttagaaccgcaagtccaccagctgaacaaaccggg 11762 Query: 614 ttcccaccgaatgtgttgaac 634 |||||||| || ||||||||| Sbjct: 11761 ttcccaccaaaagtgttgaac 11741 Score = 50.1 bits (25), Expect = 0.010 Identities = 70/85 (82%) Strand = Plus / Minus Query: 401 tcagccttggccggtgtcttctccgtcctgtcagtgacgagctccaccccaagcatcagc 460 ||||||||||| |||||||| || ||| |||| | || ||||| | ||||| ||| | | Sbjct: 12049 tcagccttggctggtgtcttgtctttccggtcactcacaagctcaatcccaaccattaac 11990 Query: 461 cctcttcctctgacatctccaatga 485 ||||||||||| || |||||||||| Sbjct: 11989 cctcttcctctcacgtctccaatga 11965
>emb|AJ248283.1|CNSPAX01 Pyrococcus abyssi complete genome; segment 1/6 Length = 307150 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 465 ttcctctgacatctccaatgatt 487 ||||||||||||||||||||||| Sbjct: 137136 ttcctctgacatctccaatgatt 137114
>ref|NM_129396.2| Arabidopsis thaliana AGT3 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 3); alanine-glyoxylate transaminase/ pyridoxal phosphate binding / transaminase AT2G38400 (AGT3) mRNA, complete cds Length = 1897 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 440 agctccaccccaagcatcagccctcttcctctgacatc 477 |||||||| ||||||||||| |||||||| | |||||| Sbjct: 1323 agctccactccaagcatcagtcctcttccccggacatc 1286
>gb|AY045941.1| Arabidopsis thaliana putative beta-alanine-pyruvate aminotransferase (At2g38400) mRNA, complete cds Length = 1727 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 440 agctccaccccaagcatcagccctcttcctctgacatc 477 |||||||| ||||||||||| |||||||| | |||||| Sbjct: 1323 agctccactccaagcatcagtcctcttccccggacatc 1286
>gb|AC004683.3| Arabidopsis thaliana chromosome 2 clone T19C21 map ve018, complete sequence Length = 81467 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Plus Query: 440 agctccaccccaagcatcagccctcttcctctgacatc 477 |||||||| ||||||||||| |||||||| | |||||| Sbjct: 35648 agctccactccaagcatcagtcctcttccccggacatc 35685
>gb|AY085348.1| Arabidopsis thaliana clone 147543 mRNA, complete sequence Length = 1704 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 440 agctccaccccaagcatcagccctcttcctctgacatc 477 |||||||| ||||||||||| |||||||| | |||||| Sbjct: 1323 agctccactccaagcatcagtcctcttccccggacatc 1286
>gb|AF166352.1|AF166352 Arabidopsis thaliana alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA, complete cds Length = 1700 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 440 agctccaccccaagcatcagccctcttcctctgacatc 477 |||||||| ||||||||||| |||||||| | |||||| Sbjct: 1295 agctccactccaagcatcagtcctcttccccggacatc 1258
>gb|BT001918.1| Arabidopsis thaliana clone C104743 putative beta-alanine-pyruvate aminotransferase (At2g38400) mRNA, complete cds Length = 1465 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 440 agctccaccccaagcatcagccctcttcctctgacatc 477 |||||||| ||||||||||| |||||||| | |||||| Sbjct: 1235 agctccactccaagcatcagtcctcttccccggacatc 1198
>gb|DQ422974.2| Lycopersicon hirsutum cultivar LA1777 mitochondrial alanine-glyoxylate transaminase (At4g39660) gene, partial cds; nuclear gene for mitochondrial product Length = 432 Score = 42.1 bits (21), Expect = 2.5 Identities = 72/89 (80%) Strand = Plus / Minus Query: 593 ccaccagcagaacagactgggttcccaccgaatgtgttgaactggatcttctgagccatc 652 ||||||||||| || || ||||| |||||| |||| || || || ||||| |||||||| Sbjct: 432 ccaccagcagagcaaacagggtttccaccgtatgtattaaattgtatcttttgagccata 373 Query: 653 acgctagcaatctcaggagttgttacaac 681 || || ||||| || || ||||| ||||| Sbjct: 372 acacttgcaatttctggcgttgtgacaac 344
>gb|AC008474.9| Homo sapiens chromosome 19 clone CTC-379B2, complete sequence Length = 186115 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 580 aagcacagccaatccaccagcagaa 604 |||||||||||| |||||||||||| Sbjct: 168485 aagcacagccaacccaccagcagaa 168509
>ref|NM_137056.2| Drosophila melanogaster CG13340-RA (CG13340), mRNA Length = 2122 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 gcgtagtccatggcgtccaccaaga 281 |||||||||||| |||||||||||| Sbjct: 761 gcgtagtccatgccgtccaccaaga 737
>gb|AC167287.2| Pan troglodytes chromosome X clone RP43-056J23 map human ortholog p11.4, complete sequence Length = 164383 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 agccaatccaccagcagaaca 606 ||||||||||||||||||||| Sbjct: 27174 agccaatccaccagcagaaca 27194
>gb|AC091387.2| Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone BACR13P15, complete sequence Length = 171222 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 gcgtagtccatggcgtccaccaaga 281 |||||||||||| |||||||||||| Sbjct: 37067 gcgtagtccatgccgtccaccaaga 37043
>gb|BT022093.1| Drosophila melanogaster AT20029 full insert cDNA Length = 2085 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 gcgtagtccatggcgtccaccaaga 281 |||||||||||| |||||||||||| Sbjct: 760 gcgtagtccatgccgtccaccaaga 736
>gb|AC008736.6|AC008736 Homo sapiens chromosome 19 clone CTD-2538C1, complete sequence Length = 191925 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 580 aagcacagccaatccaccagcagaa 604 |||||||||||| |||||||||||| Sbjct: 141633 aagcacagccaacccaccagcagaa 141609
>gb|AE003817.3| Drosophila melanogaster chromosome 2R, section 33 of 73 of the complete sequence Length = 265472 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 gcgtagtccatggcgtccaccaaga 281 |||||||||||| |||||||||||| Sbjct: 186119 gcgtagtccatgccgtccaccaaga 186143
>gb|AC005643.1|AC005643 Drosophila melanogaster, chromosome 2R, region 50C5-50C8, P1 clone DS02972, complete sequence Length = 80389 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 gcgtagtccatggcgtccaccaaga 281 |||||||||||| |||||||||||| Sbjct: 58746 gcgtagtccatgccgtccaccaaga 58722
>gb|BC098583.1| Homo sapiens Cdon homolog (mouse), mRNA (cDNA clone MGC:111524 IMAGE:30528009), complete cds Length = 5526 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 634 ctggatcttctgagccatca 653 |||||||||||||||||||| Sbjct: 3744 ctggatcttctgagccatca 3725
>gb|AC126115.5| Rattus norvegicus 4 BAC CH230-213L22 (Children's Hospital Oakland Research Institute) complete sequence Length = 214442 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 tctccttgtcaagaacctta 580 |||||||||||||||||||| Sbjct: 13414 tctccttgtcaagaacctta 13395
>gb|BT013691.1| Lycopersicon esculentum clone 132529R, mRNA sequence Length = 1708 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 659 gcaatctcaggagttgttac 678 |||||||||||||||||||| Sbjct: 1111 gcaatctcaggagttgttac 1092
>gb|AF004841.2| Homo sapiens CDO mRNA, complete cds Length = 4214 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 634 ctggatcttctgagccatca 653 |||||||||||||||||||| Sbjct: 3772 ctggatcttctgagccatca 3753
>gb|DQ422984.2| Lycopersicon pennellii cultivar LA56 mitochondrial alanine-glyoxylate transaminase (At4g39660) gene, partial sequence; nuclear gene for mitochondrial product Length = 432 Score = 40.1 bits (20), Expect = 9.8 Identities = 83/104 (79%) Strand = Plus / Minus Query: 592 tccaccagcagaacagactgggttcccaccgaatgtgttgaactggatcttctgagccat 651 |||||||||||| || || ||||| ||||| |||| || || || ||||| |||||||| Sbjct: 430 tccaccagcagagcaaacagggtttccaccatatgtattaaattgtatcttttgagccat 371 Query: 652 cacgctagcaatctcaggagttgttacaactgcaccgagtggta 695 || || ||||| || || ||||| ||||| || || ||||||| Sbjct: 370 aacacttgcaatttctggcgttgtgacaacagctccaagtggta 327
>gb|BC114435.1| Homo sapiens Cdon homolog (mouse), mRNA (cDNA clone MGC:133089 IMAGE:40027264), complete cds Length = 4058 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 634 ctggatcttctgagccatca 653 |||||||||||||||||||| Sbjct: 3648 ctggatcttctgagccatca 3629
>emb|AL390997.10| Human DNA sequence from clone RP11-159G6 on chromosome Xq21.33-23, complete sequence Length = 112328 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 ctccaatgatttcatgcttc 496 |||||||||||||||||||| Sbjct: 106804 ctccaatgatttcatgcttc 106785
>emb|AL109657.8|HSDJ842G6 Human DNA sequence from clone RP5-842G6 on chromosome 20 Contains the 3' end of the C20orf7 gene for chromosome 20 open reading frame 7 (FLJ22324) and the 3' end of the C20orf50 gene for chromosome 20 open reading frame 50 (dJ631M13.1, similar to SEL1L (DKFZp434C1826)), complete sequence Length = 100272 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 cacagccaatccaccagcag 602 |||||||||||||||||||| Sbjct: 18517 cacagccaatccaccagcag 18498
>gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238669 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 tctccttgtcaagaacctta 580 |||||||||||||||||||| Sbjct: 57567 tctccttgtcaagaacctta 57586
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 attcatgcattccgcgccgccgcc 199 |||||||||||||||| ||||||| Sbjct: 17372 attcatgcattccgcgtcgccgcc 17349
>ref|NM_016952.3| Homo sapiens Cdon homolog (mouse) (CDON), mRNA Length = 8044 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 634 ctggatcttctgagccatca 653 |||||||||||||||||||| Sbjct: 3744 ctggatcttctgagccatca 3725
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 attcatgcattccgcgccgccgcc 199 |||||||||||||||| ||||||| Sbjct: 34105990 attcatgcattccgcgtcgccgcc 34105967
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 tctccttgtcaagaacctta 580 |||||||||||||||||||| Sbjct: 21106 tctccttgtcaagaacctta 21087
>dbj|AP000842.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-680F20riken, complete sequence Length = 179848 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 634 ctggatcttctgagccatca 653 |||||||||||||||||||| Sbjct: 124004 ctggatcttctgagccatca 124023
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 attcatgcattccgcgccgccgcc 199 |||||||||||||||| ||||||| Sbjct: 23051 attcatgcattccgcgtcgccgcc 23028
>gb|AC146916.3| Rattus norvegicus strain Brown Norway clone CH230-206L9, complete sequence Length = 215015 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 tctccttgtcaagaacctta 580 |||||||||||||||||||| Sbjct: 21106 tctccttgtcaagaacctta 21087
>dbj|AB209396.1| Homo sapiens mRNA for surface glycoprotein, Ig superfamily member variant protein Length = 5804 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 634 ctggatcttctgagccatca 653 |||||||||||||||||||| Sbjct: 2133 ctggatcttctgagccatca 2114 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,975,332 Number of Sequences: 3902068 Number of extensions: 4975332 Number of successful extensions: 90656 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90413 Number of HSP's gapped (non-prelim): 234 length of query: 719 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 696 effective length of database: 17,143,297,704 effective search space: 11931735201984 effective search space used: 11931735201984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)