>UBP21_SCHPO (Q9UTT1) Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 21) (Ubiquitin-specific
            processing protease 21) (Deubiquitinating enzyme 21)
          Length = 1129

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
 Frame = -1

Query: 540  VVHFFKDNQHIQYYGVPFFFLIREGEALSDIKLRIQKKFEVPDEQFLKWKFAYV---AYN 370
            V HFFKD   +  + +PF+F++  GE L D+K R+QK+    D QF K K A +   ++ 
Sbjct: 1026 VQHFFKDLSRL--HDIPFYFVLLRGETLKDLKKRLQKRLGYNDTQFSKVKLAVLQAQSFG 1083

Query: 369  RPDYLQDSDIVLSRFQKNIYGAWEQS---LGLEH 277
            +P YL D D VL       YG  E     LGL+H
Sbjct: 1084 KPYYLTDDDEVL-------YGELEPQSHILGLDH 1110

>UBP5_SCHPO (Q09879) Probable ubiquitin carboxyl-terminal hydrolase 5 (EC|
            3.1.2.15) (Ubiquitin thioesterase 5) (Ubiquitin-specific
            processing protease 5) (Deubiquitinating enzyme 5)
          Length = 1108

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
 Frame = -1

Query: 561  PRDRLVHVVHFFKDNQHIQYYGVPFFFLIREGEALSDIKLRIQKKFEVPDEQFLKWKFAY 382
            P +++V V HF KD   I  +G+PF F+I+  E   D KLR+  + + P+  F   KF  
Sbjct: 1000 PEEKIVQVHHFHKDIARI--HGIPFSFVIKPQEKFIDTKLRLAARTQYPESIFSVIKFCV 1057

Query: 381  VAY--NRPDYLQDSDIVLSRFQKNIYGAWEQSLGLEHSDMPSKKP 253
            V +  NR  YL D DI     +K        +L L+ +   SKKP
Sbjct: 1058 VDFDNNRVVYLNDEDITYDVVEK-----LNGTLALDRAKKDSKKP 1097

>UBP7_HUMAN (Q93009) Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing
            protease 7) (Deubiquitinating enzyme 7)
            (Herpesvirus-associated ubiquitin-specific protease)
          Length = 1102

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
 Frame = -1

Query: 555  DRLVHVVHFFKDNQHIQYYGVPFFFLIREGEALSDIKLRIQKKFEVPDEQFLKWKFAYVA 376
            + LV V HF K+      +G+PF   I +GE   ++  RIQ   ++ +++F K+KFA V 
Sbjct: 987  EMLVTVAHFHKEV--FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKFAIVM 1044

Query: 375  YNRPDYLQDS--DIVLSRF--QKNIYGAWEQSLGLEHSDMPSKKPYMANQNRHSF-EKPV 211
              R  Y+ +   ++ L  F  Q          LGL+H +   K+      +R+++ EK +
Sbjct: 1045 TGRHQYINEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAPKR------SRYTYLEKAI 1098

Query: 210  KIYN 199
            KI+N
Sbjct: 1099 KIHN 1102

>HSP83_ANOGA (Q7PT10) Heat shock protein 83|
          Length = 689

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = -1

Query: 519 NQHIQYYGVPFFFLIREGEALSDIKLRIQKKFEV---PDEQFLKWKFAYVAYNRPDYLQD 349
           N+H Q+ G P   L+ + E   D K + +K  +V    DE+  K K  +   N  D  Q+
Sbjct: 198 NKHSQFIGYPIKLLVEDAEDDEDKKDKKKKTVKVKYTEDEELNKTKPIWTR-NADDISQE 256

Query: 348 SDIVLSRFQKNIYGAWEQSLGLEHSDMPSKKPYMA 244
                  F K++   WE  L ++H  +  +  + A
Sbjct: 257 E---YGEFYKSLTNDWEDHLAVKHFSVEGQLDFRA 288

>CO6_RAT (Q811M5) Complement component C6 precursor|
          Length = 934

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 11/61 (18%)
 Frame = +3

Query: 132 QCYSCPFVSRNHQVGTENITIFSCRS----------SPAFQKNG-DSGWPCMVFWRACLS 278
           QC  CP   R    GTE + +  C+S          SP ++ N  D  W C   W AC +
Sbjct: 522 QCAPCPNNGRPRLSGTECLCV--CQSGTYGENCEKRSPDYKSNAVDGNWGCWSSWSACNA 579

Query: 279 A 281
           A
Sbjct: 580 A 580


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,228,740
Number of Sequences: 219361
Number of extensions: 1907516
Number of successful extensions: 4291
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4290
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)