ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9j03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191424.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3327 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Minus Query: 366 ggcgattgtaggcaacataagcaaatttccacttaagaaactgctcgtctggaacctcaa 425 ||||||||| |||| |||||||||||||||||| ||||||||| || | |||| || Sbjct: 3151 ggcgattgtgagcaatataagcaaatttccacttcgcaaactgctcatcagaaaccagaa 3092 Query: 426 atttcttctgaatgcgcagtttgatatctgataaagcctcgccctcacgaataaggaaga 485 |||||||||||| |||| ||||||||||||||| | ||| || ||||| ||||| |||| Sbjct: 3091 gtttcttctgaatacgcactttgatatctgataatgtctcaccatcacggataagaaaga 3032 Query: 486 agaagggcactccgtagtattgaatgtgctggttatctttgaagaagtggacgacgtgaa 545 |||| || |||||||||| | ||||||||| || ||| ||| |||||| ||| |||| Sbjct: 3031 agaaaggttctccgtagtaatcaatgtgctgtttttctatgatgaagtgacagacatgaa 2972 Query: 546 ccaaacggtctcgc 559 |||||||||||||| Sbjct: 2971 ccaaacggtctcgc 2958 Score = 119 bits (60), Expect = 1e-23 Identities = 78/84 (92%) Strand = Plus / Minus Query: 271 gtctgagtgctccagtcctagggattgttcccatgctccataaatatttttctggaatcg 330 |||||||||||| ||||||||| |||||||||||| |||||||| || |||||||||||| Sbjct: 3252 gtctgagtgctcaagtcctaggcattgttcccatggtccataaacatctttctggaatcg 3193 Query: 331 gctcaatacaatatctgaatcttg 354 ||||||||| |||||||||||||| Sbjct: 3192 gctcaatacgatatctgaatcttg 3169
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 427 tttcttctgaatgcgcagtttgatatctgataaagcctcgccctcacgaataaggaagaa 486 |||||||||||| |||| ||||||||||||||| | ||| || ||||| ||||| ||||| Sbjct: 32547164 tttcttctgaatacgcactttgatatctgataatgtctcaccatcacggataagaaagaa 32547223 Query: 487 gaagggcactccgtagtattgaatgtgctgg 517 ||| || |||||||||| | |||||||||| Sbjct: 32547224 gaaaggttctccgtagtaatcaatgtgctgg 32547254 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 271 gtctgagtgctccagtcctagggattgttcccatgctccataaatatttttct 323 |||||||||||| ||||||||| |||||||||||| |||||||| || ||||| Sbjct: 32546753 gtctgagtgctcaagtcctaggcattgttcccatggtccataaacatctttct 32546805 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 322 ctggaatcggctcaatacaatatctgaatcttg 354 |||||||||||||||||| |||||||||||||| Sbjct: 32546881 ctggaatcggctcaatacgatatctgaatcttg 32546913 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 366 ggcgattgtaggcaacataagcaaatttccact 398 ||||||||| |||| ||||||||||||||||| Sbjct: 32546931 ggcgattgtgagcaatataagcaaatttccact 32546963
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 427 tttcttctgaatgcgcagtttgatatctgataaagcctcgccctcacgaataaggaagaa 486 |||||||||||| |||| ||||||||||||||| | ||| || ||||| ||||| ||||| Sbjct: 9959 tttcttctgaatacgcactttgatatctgataatgtctcaccatcacggataagaaagaa 10018 Query: 487 gaagggcactccgtagtattgaatgtgctgg 517 ||| || |||||||||| | |||||||||| Sbjct: 10019 gaaaggttctccgtagtaatcaatgtgctgg 10049 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 271 gtctgagtgctccagtcctagggattgttcccatgctccataaatatttttct 323 |||||||||||| ||||||||| |||||||||||| |||||||| || ||||| Sbjct: 9548 gtctgagtgctcaagtcctaggcattgttcccatggtccataaacatctttct 9600 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 322 ctggaatcggctcaatacaatatctgaatcttg 354 |||||||||||||||||| |||||||||||||| Sbjct: 9676 ctggaatcggctcaatacgatatctgaatcttg 9708 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 366 ggcgattgtaggcaacataagcaaatttccact 398 ||||||||| |||| ||||||||||||||||| Sbjct: 9726 ggcgattgtgagcaatataagcaaatttccact 9758
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 427 tttcttctgaatgcgcagtttgatatctgataaagcctcgccctcacgaataaggaagaa 486 |||||||||||| |||| ||||||||||||||| | ||| || ||||| ||||| ||||| Sbjct: 134685 tttcttctgaatacgcactttgatatctgataatgtctcaccatcacggataagaaagaa 134744 Query: 487 gaagggcactccgtagtattgaatgtgctgg 517 ||| || |||||||||| | |||||||||| Sbjct: 134745 gaaaggttctccgtagtaatcaatgtgctgg 134775 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 271 gtctgagtgctccagtcctagggattgttcccatgctccataaatatttttct 323 |||||||||||| ||||||||| |||||||||||| |||||||| || ||||| Sbjct: 134274 gtctgagtgctcaagtcctaggcattgttcccatggtccataaacatctttct 134326 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 322 ctggaatcggctcaatacaatatctgaatcttg 354 |||||||||||||||||| |||||||||||||| Sbjct: 134402 ctggaatcggctcaatacgatatctgaatcttg 134434 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 366 ggcgattgtaggcaacataagcaaatttccact 398 ||||||||| |||| ||||||||||||||||| Sbjct: 134452 ggcgattgtgagcaatataagcaaatttccact 134484
>gb|AY104905.1| Zea mays PCO064124 mRNA sequence Length = 781 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 379 aacataagcaaatttccacttaagaaactgctcgtctggaacctcaaatttcttctgaat 438 ||||| ||||||||||||||| ||||||||||| || ||||| | || | |||||||||| Sbjct: 716 aacatgagcaaatttccactttagaaactgctcatcaggaacttgaagtctcttctgaat 657 Query: 439 gcgcagtttgatatctgataaagcctcgccctcacgaataaggaagaagaa 489 || | ||| ||||| || ||||| || || |||||||| ||||||||||| Sbjct: 656 ccgtactttcatatccgacaaagcttcaccatcacgaattaggaagaagaa 606
>gb|AY814786.1| Schistosoma japonicum SJCHGC06278 protein mRNA, complete cds Length = 1941 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 ggtcaaaaagcacatcataatcatg 95 |||||||||| |||||||||||||| Sbjct: 1860 ggtcaaaaagaacatcataatcatg 1836
>gb|DQ186688.1| Uncultured archaeon clone GB_B06 16S ribosomal RNA gene, partial sequence Length = 804 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 ctcgccctcacgaataaggaa 483 ||||||||||||||||||||| Sbjct: 728 ctcgccctcacgaataaggaa 748
>ref|XM_383116.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG02940.1) partial mRNA Length = 4182 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 ttgccaccaatctgcagagtg 120 ||||||||||||||||||||| Sbjct: 1430 ttgccaccaatctgcagagtg 1410
>gb|AC125053.4| Mus musculus BAC clone RP23-389L19 from chromosome 18, complete sequence Length = 189741 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tttccacttaagaaactgctc 411 ||||||||||||||||||||| Sbjct: 133063 tttccacttaagaaactgctc 133083
>gb|AC154633.2| Mus musculus BAC clone RP23-296I10 from chromosome 12, complete sequence Length = 216169 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 ccatgctccataaatattttt 321 ||||||||||||||||||||| Sbjct: 145020 ccatgctccataaatattttt 145000
>emb|AJ718755.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC31-1-280, cultivar Bright Yellow 2 Length = 216 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 386 gcaaatttccacttaagaaactgctcgtctggaacctcaaatttcttctgaat 438 |||||||||||||| ||||| ||| |||||||||| ||||| |||||||| Sbjct: 157 gcaaatttccactttgaaaactcctcatctggaacctgcaattttttctgaat 209
>emb|CT025623.13| Mouse DNA sequence from clone RP23-397E11 on chromosome 12, complete sequence Length = 205791 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 ccatgctccataaatattttt 321 ||||||||||||||||||||| Sbjct: 51010 ccatgctccataaatattttt 50990
>gb|AC147572.4| Pan troglodytes BAC clone CH251-412D24 from Y, complete sequence Length = 166356 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 102874 tgctccataaatatttttct 102893
>gb|AC147608.1| Pan troglodytes BAC clone CH251-506P22 from Y, complete sequence Length = 195158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 49590 tgctccataaatatttttct 49571
>gb|AC146198.2| Pan troglodytes BAC clone CH251-475M5 from Y, complete sequence Length = 220557 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 206798 tgctccataaatatttttct 206779
>gb|AC147361.1| Pan troglodytes BAC clone CH251-528H6 from Y, complete sequence Length = 169760 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 13740 tgctccataaatatttttct 13759
>gb|AC147114.2| Pan troglodytes BAC clone CH251-548O14 from Y, complete sequence Length = 229006 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 38870 tgctccataaatatttttct 38889
>gb|AC146515.2| Pan troglodytes BAC clone CH251-113M4 from Y, complete sequence Length = 183460 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 101304 tgctccataaatatttttct 101285
>gb|AC145574.5| Mus musculus BAC clone RP24-411C16 from chromosome 6, complete sequence Length = 147836 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ataagcaaatttccacttaa 401 |||||||||||||||||||| Sbjct: 7723 ataagcaaatttccacttaa 7742
>gb|AC142348.1| Pan troglodytes BAC clone RP43-5I10 from Y, complete sequence Length = 183293 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 145899 tgctccataaatatttttct 145918
>emb|AL589782.7| Human DNA sequence from clone RP11-99I12 on chromosome 10 Contains the 3' end of the NRG3 gene for neuregulin 3, complete sequence Length = 177424 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aactgaaaatatcaccatct 195 |||||||||||||||||||| Sbjct: 123275 aactgaaaatatcaccatct 123256
>gb|AF173167.3| Pseudomonas alcaligenes putative transposase, putative transposase, gentisate 1,2-dioxygenase (xlnE), xlnF, hypothetical protein (xlnG), hypothetical protein (xlnH), xlnI, probable 3-hydroxybenzoate 6-hydroxylase (xlnD), transposase subunit (tnpA1), transposase subunit (tnpA2), transposase subunit, and putative transposase genes, complete cds Length = 12161 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 aggaagaagaagggcactccgtag 502 |||||||||||||||||| ||||| Sbjct: 1078 aggaagaagaagggcactgcgtag 1101
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 atatcaccatctttagttgt 203 |||||||||||||||||||| Sbjct: 211275 atatcaccatctttagttgt 211294
>emb|BX957341.7| Zebrafish DNA sequence from clone CH211-11N16 in linkage group 15, complete sequence Length = 177343 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 479 aggaagaagaagggcactccgtagtattgaatgtgc 514 ||||| |||||||||||| || ||||||||||||| Sbjct: 109320 aggaaaaagaagggcacttggttgtattgaatgtgc 109355
>dbj|BS000677.1| Pan troglodytes chromosome Y clone: PTB-391J06, complete sequence Length = 171013 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 91086 tgctccataaatatttttct 91067
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 11519099 tgctccataaatatttttct 11519080 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 10666362 tgctccataaatatttttct 10666381 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 3620629 tgctccataaatatttttct 3620610 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 2697601 tgctccataaatatttttct 2697620
>gb|AC099031.1| Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone BACR34O23, complete sequence Length = 171019 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 tttcttctgaatgcgcagtt 446 |||||||||||||||||||| Sbjct: 18196 tttcttctgaatgcgcagtt 18215
>gb|AC156948.10| Mus musculus 10 BAC RP24-347D15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 181617 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ctgaaaatatcaccatcttt 197 |||||||||||||||||||| Sbjct: 84007 ctgaaaatatcaccatcttt 84026
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 353 tggagatagtccgggcgattgtaggcaa 380 |||||| |||||||||||||| |||||| Sbjct: 28157687 tggagaaagtccgggcgattgaaggcaa 28157660
>gb|AC007085.7|AC007085 Drosophila melanogaster, chromosome 2R, region 44D2-44E1, BAC clone BACR21H10, complete sequence Length = 166867 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 tttcttctgaatgcgcagtt 446 |||||||||||||||||||| Sbjct: 10535 tttcttctgaatgcgcagtt 10516
>gb|AC148933.3| Pan troglodytes BAC clone CH251-571K7 from chromosome y, complete sequence Length = 171231 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 146490 tgctccataaatatttttct 146509
>gb|AC079586.6| Homo sapiens BAC clone RP11-207G14 from 2, complete sequence Length = 148332 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 caacataagcaaatttccac 397 |||||||||||||||||||| Sbjct: 42305 caacataagcaaatttccac 42324
>gb|AC007322.4|AC007322 Homo sapiens BAC clone RP11-553C13 from Y, complete sequence Length = 184215 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 179313 tgctccataaatatttttct 179294
>gb|AC016752.2|AC016752 Homo sapiens BAC clone RP11-506M9 from Y, complete sequence Length = 166436 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 34397 tgctccataaatatttttct 34378
>gb|AC008175.2|AC008175 Homo sapiens BAC clone RP11-427G18 from Y, complete sequence Length = 205237 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 109020 tgctccataaatatttttct 109039
>gb|AC007965.3|AC007965 Homo sapiens BAC clone RP11-245K4 from Y, complete sequence Length = 182083 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 145602 tgctccataaatatttttct 145621
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2 (P1-P2-P3-IR2@) on chromosome Y Length = 4538292 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 4222497 tgctccataaatatttttct 4222516 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 1825809 tgctccataaatatttttct 1825790 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 748115 tgctccataaatatttttct 748134 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgctccataaatatttttct 323 |||||||||||||||||||| Sbjct: 216508 tgctccataaatatttttct 216489
>gb|AC092380.4| Homo sapiens chromosome 16 clone RP11-727M7, complete sequence Length = 167071 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 atgctccataaatatttttctgga 326 |||||||||||||||||| ||||| Sbjct: 132960 atgctccataaatattttactgga 132937
>gb|AC174081.1| Mus musculus BAC clone RP24-376P15 from chromosome 6, complete sequence Length = 153392 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ataagcaaatttccacttaa 401 |||||||||||||||||||| Sbjct: 88967 ataagcaaatttccacttaa 88986
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 353 tggagatagtccgggcgattgtaggcaa 380 |||||| |||||||||||||| |||||| Sbjct: 13232 tggagaaagtccgggcgattgaaggcaa 13205
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 353 tggagatagtccgggcgattgtaggcaa 380 |||||| |||||||||||||| |||||| Sbjct: 140983 tggagaaagtccgggcgattgaaggcaa 140956
>emb|BX000997.10| Zebrafish DNA sequence from clone CH211-151C7 in linkage group 3, complete sequence Length = 160921 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 479 aggaagaagaagggcactccgtagtattgaatgtgc 514 ||||| |||||||||||| || ||||||||||||| Sbjct: 93631 aggaaaaagaagggcacttggttgtattgaatgtgc 93666
>dbj|AK106702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E04, full insert sequence Length = 2389 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 tggagatagtccgggcgattgtaggcaa 380 |||||| |||||||||||||| |||||| Sbjct: 1925 tggagaaagtccgggcgattgaaggcaa 1952
>gb|AE003836.4| Drosophila melanogaster chromosome 2R, section 14 of 73 of the complete sequence Length = 259383 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 tttcttctgaatgcgcagtt 446 |||||||||||||||||||| Sbjct: 33793 tttcttctgaatgcgcagtt 33774
>gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence Length = 122469 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 agatcttcaccggcttttcaaaag 227 |||||||||| ||||||||||||| Sbjct: 16747 agatcttcactggcttttcaaaag 16724
>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence Length = 221208 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 507 gaatgtgctggttatctttgaaga 530 ||||||| |||||||||||||||| Sbjct: 15041 gaatgtggtggttatctttgaaga 15064
>gb|AC005457.1|AC005457 Drosophila melanogaster, chromosome 2R, region 44D1-44D2, P1 clone DS08616, complete sequence Length = 31831 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 tttcttctgaatgcgcagtt 446 |||||||||||||||||||| Sbjct: 11221 tttcttctgaatgcgcagtt 11240
>dbj|D79206.1|HUMRCP Homo sapiens gene for ryudocan core protein, exon1-5, complete cds Length = 23822 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 aaggaagaagaagggcactc 497 |||||||||||||||||||| Sbjct: 13023 aaggaagaagaagggcactc 13004
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gcataaataacaatgctatt 141 |||||||||||||||||||| Sbjct: 1933464 gcataaataacaatgctatt 1933483
>emb|AL833773.6| Mouse DNA sequence from clone RP23-434A2 on chromosome 4, complete sequence Length = 157131 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 507 gaatgtgctggttatctttgaaga 530 ||||||| |||||||||||||||| Sbjct: 85079 gaatgtggtggttatctttgaaga 85102
>emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chromosome 2, complete sequence Length = 181014 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gctccataaatatttttctg 324 |||||||||||||||||||| Sbjct: 72532 gctccataaatatttttctg 72513 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,675,015 Number of Sequences: 3902068 Number of extensions: 5675015 Number of successful extensions: 104931 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104625 Number of HSP's gapped (non-prelim): 306 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
