ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9i20 |
|---|---|
| Clone Library Name | barley_pub |
>SYC_VIBF1 (Q5E4F1) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 461 Score = 29.6 bits (65), Expect = 5.3 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -3 Query: 381 TWMEAWGPDRAGWH 340 TW WGP R GWH Sbjct: 195 TWESPWGPGRPGWH 208
>SYC_VIBVY (Q7MLR5) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 460 Score = 29.6 bits (65), Expect = 5.3 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -3 Query: 381 TWMEAWGPDRAGWH 340 TW WGP R GWH Sbjct: 193 TWESPWGPGRPGWH 206
>SYC_VIBVU (Q8D8R1) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 460 Score = 29.6 bits (65), Expect = 5.3 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -3 Query: 381 TWMEAWGPDRAGWH 340 TW WGP R GWH Sbjct: 193 TWESPWGPGRPGWH 206
>SYC_VIBPA (Q87QJ9) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 460 Score = 29.6 bits (65), Expect = 5.3 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -3 Query: 381 TWMEAWGPDRAGWH 340 TW WGP R GWH Sbjct: 193 TWESPWGPGRPGWH 206
>CCAPR_DROME (Q868T3) Cardioacceleratory peptide receptor| Length = 506 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 511 RWSPCRCSSYRRKSLRGHLCYQSRCHQGGRKV 416 +W C C SYR S Q+RCH GR++ Sbjct: 423 KWFTCCCKSYRNNS------QQNRCHTVGRRL 448
>SYC_SHEON (Q8EG22) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 459 Score = 29.6 bits (65), Expect = 5.3 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -3 Query: 381 TWMEAWGPDRAGWH 340 TW WGP R GWH Sbjct: 193 TWESPWGPGRPGWH 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,103,096 Number of Sequences: 219361 Number of extensions: 893015 Number of successful extensions: 3283 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3273 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
