Clone Name | rbags9i03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RLA3_MAIZE (O24413) 60S acidic ribosomal protein P3 (P1/P2-like)... | 105 | 1e-22 | 2 | RLA3_ORYSA (P56724) 60S acidic ribosomal protein P3 (P1/P2-like) | 95 | 1e-19 | 3 | YIBG_ECOLI (P32106) Hypothetical protein yibG precursor (ORF-A3) | 30 | 6.1 | 4 | OR1D5_HUMAN (P58170) Olfactory receptor 1D5 (Olfactory receptor ... | 29 | 8.0 | 5 | OR1D4_HUMAN (P47884) Olfactory receptor 1D4 (Olfactory receptor ... | 29 | 8.0 |
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>RLA3_MAIZE (O24413) 60S acidic ribosomal protein P3 (P1/P2-like) (P3A)| Length = 119 Score = 105 bits (261), Expect = 1e-22 Identities = 56/119 (47%), Positives = 70/119 (58%), Gaps = 1/119 (0%) Frame = -3 Query: 552 GVFTFVCRDSGAEWSAKQHKGELEASAATPYDLQRQLVSAACAEDKSGGVQSSFTMVSPN 373 GV+TFVCR++G EW+AKQH GE+EASAATPY+LQR+LV+AA A D GVQSSF+MV+P+ Sbjct: 1 GVYTFVCRNNGGEWTAKQHSGEIEASAATPYELQRRLVAAASAADSRYGVQSSFSMVTPS 60 Query: 372 SAIFQV-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDLGFSLFD 199 SA+FQV V +DD+GFSLFD Sbjct: 61 SAVFQVIVGAVGGGAMMVSGGGGGGAAASGGAAAEAPKEEKKEEEKEESDDDMGFSLFD 119
>RLA3_ORYSA (P56724) 60S acidic ribosomal protein P3 (P1/P2-like)| Length = 118 Score = 95.1 bits (235), Expect = 1e-19 Identities = 43/67 (64%), Positives = 55/67 (82%) Frame = -3 Query: 552 GVFTFVCRDSGAEWSAKQHKGELEASAATPYDLQRQLVSAACAEDKSGGVQSSFTMVSPN 373 GVF+FVC+ G EW+AKQH+G+LEASA++ YDLQR +V A + D SGGVQSSF++VSP Sbjct: 1 GVFSFVCKSKGGEWTAKQHEGDLEASASSTYDLQRNVVQTALSADSSGGVQSSFSLVSPT 60 Query: 372 SAIFQVV 352 SA+F VV Sbjct: 61 SAVFVVV 67
>YIBG_ECOLI (P32106) Hypothetical protein yibG precursor (ORF-A3)| Length = 153 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/54 (27%), Positives = 31/54 (57%) Frame = -3 Query: 546 FTFVCRDSGAEWSAKQHKGELEASAATPYDLQRQLVSAACAEDKSGGVQSSFTM 385 F+F+C+ GA+ KQ++ + ++A T YDL + + + + G ++SF + Sbjct: 11 FSFICQLHGADVKIKQNESMMGSTAMT-YDLSEEKLMKLKYKSQHGDSEASFRL 63
>OR1D5_HUMAN (P58170) Olfactory receptor 1D5 (Olfactory receptor 17-31)| (OR17-31) Length = 312 Score = 29.3 bits (64), Expect = 8.0 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 97 VTFCSCEDLVMLFCSFDILLWL 32 VTFC ++ LFC ILLWL Sbjct: 166 VTFCGPREIHYLFCDMYILLWL 187
>OR1D4_HUMAN (P47884) Olfactory receptor 1D4 (Olfactory receptor 17-30)| (OR17-30) Length = 311 Score = 29.3 bits (64), Expect = 8.0 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 97 VTFCSCEDLVMLFCSFDILLWL 32 VTFC ++ LFC ILLWL Sbjct: 166 VTFCGPREIHYLFCDMYILLWL 187 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,935,629 Number of Sequences: 219361 Number of extensions: 645592 Number of successful extensions: 1636 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1602 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1634 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)