ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071413.1| Oryza sativa (japonica cultivar-group) cDNA clon... 777 0.0
2dbj|AK104905.1| Oryza sativa (japonica cultivar-group) cDNA clon... 761 0.0
3gb|AF475107.1| Triticum aestivum Cop8 mRNA, partial cds 630 e-177
4gb|AY109882.1| Zea mays CL3083_1 mRNA sequence 620 e-174
5gb|BT019184.1| Zea mays clone Contig855.F mRNA sequence 460 e-126
6gb|AF508278.1| Lilium longiflorum COP8-like protein mRNA, comple... 200 4e-48
7gb|AF308813.1| Lilium longiflorum COP8-like protein mRNA, partia... 188 2e-44
8ref|NM_123663.1| Arabidopsis thaliana COP8 (CONSTITUTIVE PHOTOMO... 170 4e-39
9gb|BT025548.1| Arabidopsis thaliana At5g42970 mRNA, complete cds 170 4e-39
10gb|AF395060.1|AF395060 Arabidopsis thaliana CSN complex subunit ... 170 4e-39
11dbj|AK176360.1| Arabidopsis thaliana mRNA for COP8 (constitutive... 170 4e-39
12gb|AY087068.1| Arabidopsis thaliana clone 31282 mRNA, complete s... 163 1e-36
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 155 2e-34
14gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 155 2e-34
15gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str... 155 2e-34
16gb|AF176089.1|AF176089 Arabidopsis thaliana COP8 mRNA, complete cds 155 2e-34
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
18emb|BX833730.1|CNS0A0AV Arabidopsis thaliana Full-length cDNA Co... 96 2e-16
19dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 58 4e-05
20gb|AC092853.18| Mus musculus strain 129/SvJ clone mgs1-271d8 map... 48 0.040
21emb|AL671856.16| Mouse DNA sequence from clone RP23-328E8 on chr... 48 0.040
22gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 44 0.62
23gb|DQ437743.1| Pseudomonas aeruginosa strain 19660 ExoU Island B... 44 0.62
24gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete ... 44 0.62
25emb|AL669998.1|NCB1K11 Neurospora crassa DNA linkage group II BA... 42 2.4
26gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 42 2.4
27gb|AC013727.7| Homo sapiens BAC clone RP11-451G1 from 2, complet... 42 2.4
28gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 42 2.4
29gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 42 2.4
30gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome 42 2.4
31ref|XM_367405.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.7
32gb|AC122118.7| Mus musculus chromosome 18, clone RP24-225P17, co... 40 9.7
33ref|XM_818006.1| Trypanosoma brucei TREU927 GTPase activating pr... 40 9.7
34gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome ... 40 9.7
35ref|XM_735954.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 9.7
36gb|AC004874.1| Homo sapiens PAC clone RP4-744D13 from 7, complet... 40 9.7
37gb|AC142288.1| Pan troglodytes BAC clone RP43-178D12 from 7, com... 40 9.7
38gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete s... 40 9.7
39emb|CR788305.17| Zebrafish DNA sequence from clone DKEYP-59G5 in... 40 9.7
40emb|AL445214.7| Human DNA sequence from clone RP11-208F1 on chro... 40 9.7
41emb|AL669837.3| Mouse DNA sequence from clone RP23-219P13 on chr... 40 9.7
42emb|AL033528.20|HS125I3 Human DNA sequence from clone RP1-125I3 ... 40 9.7
43dbj|AK157183.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 9.7
44dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
45dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
46ref|XM_394516.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 9.7
47dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
48gb|AC008245.6| Homo sapiens chromosome 18, clone RP11-146N18, co... 40 9.7
49dbj|AP001724.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.7
50dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
51gb|AC121540.14| Mus musculus chromosome 3, clone RP23-48L9, comp... 40 9.7
52dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
53dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
54emb|BX537259.24| Zebrafish DNA sequence from clone CH211-241P10 ... 40 9.7
55gb|AC005582.1|AC005582 Homo sapiens clone UWGC:g1211a049 from 7p... 40 9.7
56gb|AC155158.15| Mus musculus chromosome 3, clone RP24-70L3, comp... 40 9.7
57emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on ch... 40 9.7
58gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosom... 40 9.7
59emb|AL662804.18| Mouse DNA sequence from clone RP23-341C5 on chr... 40 9.7
60dbj|AP000688.1| Homo sapiens genomic DNA, chromosome 21q22.2, PA... 40 9.7
61dbj|AB003151.1| Homo sapiens DNA, chromosome 21q22.2, PAC clone ... 40 9.7 
>dbj|AK071413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092I05, full
            insert sequence
          Length = 1568

 Score =  777 bits (392), Expect = 0.0
 Identities = 564/619 (91%), Gaps = 2/619 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   ctcagacaggtatcgcgattcccttgctcgacatgctgtcaaggatgtcgttcaacgctt 147
            |||| ||||| || || ||||||||||| ||||||||||| || |||||||||| |||||
Sbjct: 1341 ctcacacaggaatagccattcccttgcttgacatgctgtccagaatgtcgttcagcgctt 1282

                                                                        
Query: 148  ggcacagcccagcaatctgttggtcccactgctgcaacccttcantgtcatcctcaaagt 207
            ||||||| || ||||||||||||||||||||||||| | ||||| ||||||||||||| |
Sbjct: 1281 ggcacagtcccgcaatctgttggtcccactgctgcagctcttcagtgtcatcctcaaaat 1222

                                                                        
Query: 208  gtatcacagcttcaacctgatcaattgaaccccgcattctatcttcacagatcattcgac 267
            ||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||  
Sbjct: 1221 gtatcacagcttcaacctgatcaattgaacctcgcatcctatcttcataaatcattcgcg 1162

                                                                        
Query: 268  atgctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaaac 327
            ||||||||||||||||||| ||||||||||||||||| |||| ||||||||| ||||| |
Sbjct: 1161 atgctatcttctcagccttcctagggtcaatgcccaataatgctccaagctcatcaaagc 1102

                                                                        
Query: 328  tgatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaa 387
            ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1101 tgatattagtgtaaagtttactggcactaaggaggttatgctcaatcattgcccggtcaa 1042

                                                                        
Query: 388  gcacagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatg 447
            ||||||||||||| ||||| |  || ||||||||||||||  ||||||||||||||||||
Sbjct: 1041 gcacagtagacttatctggtaacagagctttttgatgcggtctcagctcctctgcaaatg 982

                                                                        
Query: 448  catcaatttctggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtata 507
            | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 981  cttcaatttctggtttcctcaaaatcctttcaagaaagaccttctgcagtattgggtata 922

                                                                        
Query: 508  tcttgagctttgagcatctttcatccttgtacaatgtagcaagaacgcgagagcgttgtg 567
            |||| | |||||||||||| |||||||||||||||||||||||||| ||||| ||||| |
Sbjct: 921  tcttcaactttgagcatctctcatccttgtacaatgtagcaagaacacgagatcgttgcg 862

                                                                        
Query: 568  ggccagcaccagccaatattgtgcatgttacagcagcactaagagcttgctcaagagcat 627
            | |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||
Sbjct: 861  gaccagcaccagccaatattgtgcatgtcacagcagcactaagagcttgctccaaagcat 802

                                                                        
Query: 628  tttcatcaatctcttcatccccaatttgggcgttgctcaatctgagagataccatagtat 687
            ||||||| |||||||| || ||||||| ||||||| ||||||||||||||  ||||||| 
Sbjct: 801  tttcatcgatctcttcgtcaccaattt-ggcgttgttcaatctgagagatgtcatagta- 744

                               
Query: 688  tcgaagtgcagcttccaag 706
            |||||||||||||||||||
Sbjct: 743  tcgaagtgcagcttccaag 725
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>dbj|AK104905.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G04, full
            insert sequence
          Length = 1519

 Score =  761 bits (384), Expect = 0.0
 Identities = 563/619 (90%), Gaps = 3/619 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   ctcagacaggtatcgcgattcccttgctcgacatgctgtcaaggatgtcgttcaacgctt 147
            |||| ||||| || || ||||||||||| ||||||||||| || |||||||||| |||||
Sbjct: 1295 ctcacacaggaatagccattcccttgcttgacatgctgtccagaatgtcgttcagcgctt 1236

                                                                        
Query: 148  ggcacagcccagcaatctgttggtcccactgctgcaacccttcantgtcatcctcaaagt 207
            ||||||| || ||||||||||||||||||||||||| | ||||| ||||||||||||| |
Sbjct: 1235 ggcacagtcc-gcaatctgttggtcccactgctgcagctcttcagtgtcatcctcaaaat 1177

                                                                        
Query: 208  gtatcacagcttcaacctgatcaattgaaccccgcattctatcttcacagatcattcgac 267
            ||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||  
Sbjct: 1176 gtatcacagcttcaacctgatcaattgaacctcgcatcctatcttcataaatcattcgcg 1117

                                                                        
Query: 268  atgctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaaac 327
            |||||||||| |||||||| ||||||||||||||||| |||| ||||||||| ||||| |
Sbjct: 1116 atgctatcttttcagccttcctagggtcaatgcccaataatgctccaagctcatcaaagc 1057

                                                                        
Query: 328  tgatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaa 387
            ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1056 tgatattagtgtaaagtttactggcactaaggaggttatgctcaatcattgcccggtcaa 997

                                                                        
Query: 388  gcacagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatg 447
            ||||||||||||| ||||| |  || ||||||||||||||  ||||||||||||||||||
Sbjct: 996  gcacagtagacttatctggtaacagagctttttgatgcggtctcagctcctctgcaaatg 937

                                                                        
Query: 448  catcaatttctggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtata 507
            | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 936  cttcaatttctggtttcctcaaaatcctttcaagaaagaccttctgcagtattgggtata 877

                                                                        
Query: 508  tcttgagctttgagcatctttcatccttgtacaatgtagcaagaacgcgagagcgttgtg 567
            |||| | |||||||||||| |||||||||||||||||||||||||| ||||| ||||| |
Sbjct: 876  tcttcaactttgagcatctctcatccttgtacaatgtagcaagaacacgagatcgttgcg 817

                                                                        
Query: 568  ggccagcaccagccaatattgtgcatgttacagcagcactaagagcttgctcaagagcat 627
            | |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||
Sbjct: 816  gaccagcaccagccaatattgtgcatgtcacagcagcactaagagcttgctccaaagcat 757

                                                                        
Query: 628  tttcatcaatctcttcatccccaatttgggcgttgctcaatctgagagataccatagtat 687
            ||||||| |||||||| || ||||||| ||||||| ||||||||||||||  ||||||| 
Sbjct: 756  tttcatcgatctcttcgtcaccaattt-ggcgttgttcaatctgagagatgtcatagta- 699

                               
Query: 688  tcgaagtgcagcttccaag 706
            |||||||||||||||||||
Sbjct: 698  tcgaagtgcagcttccaag 680
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>gb|AF475107.1| Triticum aestivum Cop8 mRNA, partial cds
          Length = 378

 Score =  630 bits (318), Expect = e-177
 Identities = 362/376 (96%), Gaps = 1/376 (0%)
 Strand = Plus / Minus

                                                                       
Query: 91  agacaggtatcgcgattcccttgctcgacatgctgtcaaggatgtcgttcaacgcttggc 150
           |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 376 agacaggtatagcgatccccttgctcgacatgctgtcaaggatgtcgttcagcgcttggc 317

                                                                       
Query: 151 acagcccagcaatctgttggtcccactgctgcaacccttcantgtcatcctcaaagtgta 210
           |||  |||||||||||||||||||||||||||| || |||  ||||||||||||||||||
Sbjct: 316 acaatccagcaatctgttggtcccactgctgcagccnttcggtgtcatcctcaaagtgta 257

                                                                       
Query: 211 tcacagcttcaacctgatcaattgaaccccgcattctatcttcacagatcattcgacatg 270
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 256 tcacagcttcaacctgatcaattgaaccccgcattctatcttcacaaatcattcgacatg 197

                                                                       
Query: 271 ctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaaactga 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 196 ctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaagctga 137

                                                                       
Query: 331 tattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaagca 390
           |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 136 tattggtgtaaagtttactggcactaaggagattatgctcaatcattgcccgctcaagca 77

                                                                       
Query: 391 cagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgcat 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  cagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgcat 17

                           
Query: 451 caattt-ctggtttcc 465
           |||||| |||||||||
Sbjct: 16  caatttnctggtttcc 1
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>gb|AY109882.1| Zea mays CL3083_1 mRNA sequence
          Length = 1578

 Score =  620 bits (313), Expect = e-174
 Identities = 530/600 (88%), Gaps = 2/600 (0%)
 Strand = Plus / Plus

                                                                       
Query: 105 attcccttgctcgacatgctgtcaaggatgtcgttcaacgcttggcacagcccagcaatc 164
           ||||||||||| |||||||||||||||||||| ||||  ||||||||||| |||||||||
Sbjct: 284 attcccttgcttgacatgctgtcaaggatgtcattcagggcttggcacagtccagcaatc 343

                                                                       
Query: 165 tgttggtcccactgctgcaacccttcantgtcatcctcaaagtgtatcacagcttcaacc 224
           || || ||||| ||||||| | ||||  ||||||| ||||| ||||||||||| ||||||
Sbjct: 344 tgctgatcccattgctgcagctcttccgtgtcatcatcaaaatgtatcacagcctcaacc 403

                                                                       
Query: 225 tgatcaattgaaccccgcattctatcttcacagatcattcgacatgctatcttctcagcc 284
           ||||||||||| |||||||||||||| ||| | ||||| ||| |||||||||||||||||
Sbjct: 404 tgatcaattgagccccgcattctatcctcataaatcatccgagatgctatcttctcagcc 463

                                                                       
Query: 285 tttctagggtcaatgcccaacaatgttccaagctcctcaaaactgatattggtgtaaagt 344
           || || || ||||| ||||  ||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 464 ttccttggatcaatccccagtaatgtcccaagctcatcaaagctgatatttgtgtaaagt 523

                                                                       
Query: 345 ttactggcactaaggagattatgctcaatcatcgcccggtcaagcacagtagacttgtct 404
           |||||||||||||||||||||||||| ||||| || |||||||||||||| ||||| |||
Sbjct: 524 ttactggcactaaggagattatgctcgatcattgctcggtcaagcacagtcgacttatct 583

                                                                       
Query: 405 ggcagaagggctttttgatgcggcttcagctcctctgcaaatgcatcaatttctggtttc 464
           || |  |  ||||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 584 ggtaataaagctttctgatgcggcctaagctcctctgcaaatgcatcaatttctggtttc 643

                                                                       
Query: 465 ctcaaaatcctttcaagaaaaaccttctgcagtattgggtatatcttgagctttgagcat 524
           |||||||| ||||||||  ||||||||||||||||||||||||| || | ||| ||||||
Sbjct: 644 ctcaaaattctttcaaggtaaaccttctgcagtattgggtatattttcaacttcgagcat 703

                                                                       
Query: 525 ctttcatccttgtacaatgtagcaagaacgcgagagcgttgtgggccagcaccagccaat 584
           ||||||||||||||||  ||||||||||| || ||||||||||| |||||||||||||||
Sbjct: 704 ctttcatccttgtacagagtagcaagaacacgggagcgttgtggaccagcaccagccaat 763

                                                                       
Query: 585 attgtgcatgttacagcagcactaagagcttgctcaagagcattttcatcaatctcttca 644
           ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 764 attgtgcatgtcacagcagcactaagagcttgctcaagtgcattttcatcaatctcttcg 823

                                                                       
Query: 645 tccccaatttgggcgttgctcaatctgagagataccatagtattcgaagtgcagcttcca 704
           || ||||| |  |||||| ||||| ||||| ||  |||| || |||||||||||||||||
Sbjct: 824 tctccaatct-tgcgttgttcaatttgagaaatgtcataata-tcgaagtgcagcttcca 881
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>gb|BT019184.1| Zea mays clone Contig855.F mRNA sequence
          Length = 1394

 Score =  460 bits (232), Expect = e-126
 Identities = 382/431 (88%), Gaps = 1/431 (0%)
 Strand = Plus / Minus

                                                                        
Query: 105  attcccttgctcgacatgctgtcaaggatgtcgttcaacgcttggcacagcccagcaatc 164
            ||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||
Sbjct: 1064 attcccttgcttgacatgctgtcaaggatgtcgttcagggcttggcacagtccagcaatc 1005

                                                                        
Query: 165  tgttggtcccactgctgcaacccttcantgtcatcctcaaagtgtatcacagcttcaacc 224
            || || ||||| ||||||| | ||||  ||||||| ||||| ||||||||||| ||||||
Sbjct: 1004 tgctgatcccattgctgcagctcttccgtgtcatcatcaaaatgtatcacagcctcaacc 945

                                                                        
Query: 225  tgatcaattgaaccccgcattctatcttcacagatcattcgacatgctatcttctcagcc 284
            ||||||||||| |||||||||||||| ||| | ||||| ||| |||||||||||||||||
Sbjct: 944  tgatcaattgagccccgcattctatcctcataaatcatccgagatgctatcttctcagcc 885

                                                                        
Query: 285  tttctagggtcaatgcccaacaatgttccaagctcctcaaaactgatattggtgtaaagt 344
            || || || ||||| ||||  ||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 884  ttccttggatcaatccccagtaatgtcccaagctcatcaaagctgatatttgtgtaaagt 825

                                                                        
Query: 345  ttactggcactaaggagattatgctcaatcatcgcccggtcaagcacagtagacttgtct 404
            |||||||||||||||||||||||||| ||||| || |||||||||||||| ||||| |||
Sbjct: 824  ttactggcactaaggagattatgctcgatcattgctcggtcaagcacagtcgacttatct 765

                                                                        
Query: 405  ggcagaagggcttt-ttgatgcggcttcagctcctctgcaaatgcatcaatttctggttt 463
            || |  |  ||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 764  ggtaataaagctttcttgatgcggcctcagctcctctgcaaatgcatcaatttctggttt 705

                                                                        
Query: 464  cctcaaaatcctttcaagaaaaaccttctgcagtattgggtatatcttgagctttgagca 523
            ||||||||| ||||||||  ||||||||||||||||||||||||| || | ||| |||||
Sbjct: 704  cctcaaaattctttcaaggtaaaccttctgcagtattgggtatattttcaacttcgagca 645

                       
Query: 524  tctttcatcct 534
            |||||||||||
Sbjct: 644  tctttcatcct 634



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 532 ccttgtacaatgtagcaagaacgcgagagcgttgtgggccagcaccagcca 582
           |||||||||  ||||||||||| || || |||||||| |||||||||||||
Sbjct: 51  ccttgtacagagtagcaagaacacgggaacgttgtggaccagcaccagcca 1
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>gb|AF508278.1| Lilium longiflorum COP8-like protein mRNA, complete cds
          Length = 1627

 Score =  200 bits (101), Expect = 4e-48
 Identities = 276/333 (82%), Gaps = 1/333 (0%)
 Strand = Plus / Minus

                                                                        
Query: 339  taaagtttactggcactaaggagattatgctcaatcatcgcccggtcaagcacagtagac 398
            |||||||| || ||||| |  ||||||||||| ||||| || ||||| || ||||| || 
Sbjct: 1030 taaagtttgctagcactcaaaagattatgctcgatcattgcacggtccagtacagtggag 971

                                                                        
Query: 399  ttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgcatcaatttct 458
            |||||||| | ||| ||||| || || |  || || || || ||||||||||||||||| 
Sbjct: 970  ttgtctggtaaaagagctttctggtgtgcttttagttcttcagcaaatgcatcaatttcg 911

                                                                        
Query: 459  ggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtatatcttgagcttt 518
            ||||| |||| ||||||||| | | | ||||||||||  ||||||||||  || | ||||
Sbjct: 910  ggttttctcagaatcctttccaaatacaccttctgcaagattgggtatactttcaacttt 851

                                                                        
Query: 519  gagcatctttcatccttgtacaatgtagcaagaacgcgagagcgttgtgggccagcacca 578
            ||||| | ||||||||| ||||| ||||||||||| |||||||||||||| |||||| ||
Sbjct: 850  gagcaccgttcatccttatacaaggtagcaagaacccgagagcgttgtggaccagcagca 791

                                                                        
Query: 579  gccaatattgtgcatgttacagcagcactaagagcttgctcaagagcattttcatcaatc 638
            |||||||||||||| || |||||||| ||||||||||| || || |||| ||||||||||
Sbjct: 790  gccaatattgtgcaggtcacagcagcgctaagagcttgttccagtgcatcttcatcaatc 731

                                             
Query: 639  tcttcatccccaatttgggcgttgctcaatctg 671
            || || || || |||| |||||| |||||||||
Sbjct: 730  tcctcgtctccgattt-ggcgtttctcaatctg 699
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>gb|AF308813.1| Lilium longiflorum COP8-like protein mRNA, partial cds
          Length = 490

 Score =  188 bits (95), Expect = 2e-44
 Identities = 198/231 (85%), Gaps = 1/231 (0%)
 Strand = Plus / Minus

                                                                       
Query: 441 gcaaatgcatcaatttctggtttcctcaaaatcctttcaagaaaaaccttctgcagtatt 500
           ||||||||||||||||| ||||| |||| ||||||||| | | | ||||||||||  |||
Sbjct: 439 gcaaatgcatcaatttcgggttttctcagaatcctttccaaatacaccttctgcaagatt 380

                                                                       
Query: 501 gggtatatcttgagctttgagcatctttcatccttgtacaatgtagcaagaacgcgagag 560
           |||||||  || | ||||||||| | ||||||||| ||||| ||||||||||| ||||||
Sbjct: 379 gggtatactttcaactttgagcaccgttcatccttatacaaggtagcaagaacccgagag 320

                                                                       
Query: 561 cgttgtgggccagcaccagccaatattgtgcatgttacagcagcactaagagcttgctca 620
           |||||||| |||||| |||||||||||||||| || |||||||| ||||||||||| || 
Sbjct: 319 cgttgtggaccagcagcagccaatattgtgcaggtcacagcagcgctaagagcttgttcc 260

                                                              
Query: 621 agagcattttcatcaatctcttcatccccaatttgggcgttgctcaatctg 671
           || |||| |||||||||||| || || || |||| |||||| |||||||||
Sbjct: 259 agtgcatcttcatcaatctcctcgtctccgattt-ggcgtttctcaatctg 210
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>ref|NM_123663.1| Arabidopsis thaliana COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8) AT5G42970
            (COP8) mRNA, complete cds
          Length = 1563

 Score =  170 bits (86), Expect = 4e-39
 Identities = 327/406 (80%), Gaps = 1/406 (0%)
 Strand = Plus / Minus

                                                                        
Query: 269  tgctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaaact 328
            |||||||||||| || ||||| || |||||  ||||||  ||||| |  || ||||| ||
Sbjct: 1098 tgctatcttctccgcttttcttggatcaatcgccaacagagttcccaattcatcaaacct 1039

                                                                        
Query: 329  gatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaag 388
             || || ||||| ||||| || |||||||| || |||||||||||||| || ||||||||
Sbjct: 1038 tatgtttgtgtagagtttgcttgcactaagaaggttatgctcaatcatagcacggtcaag 979

                                                                        
Query: 389  cacagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgc 448
             ||||| || ||||| |||| |   ||||| ||||| ||| | || || |||| ||| ||
Sbjct: 978  aacagtggatttgtcaggcaaagatgctttctgatgtggccttagttcttctgaaaaggc 919

                                                                        
Query: 449  atcaatttctggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtatat 508
            |||||| |||||| |||| ||||||||||| ||| | ||||||||||| || || || ||
Sbjct: 918  atcaatctctggtctccttaaaatcctttccagatacaccttctgcaggataggataaat 859

                                                                        
Query: 509  cttgagctttgagcatctttcatccttgtacaatgtagcaagaacgcgagagcgttgtgg 568
            ||| ||||| ||||| |  ||||| ||||| || || |||||||| ||||| || || ||
Sbjct: 858  cttcagcttggagcaacgctcatctttgtataaagttgcaagaacacgagaacgctgagg 799

                                                                        
Query: 569  gccagcaccagccaatattgtgcatgttacagcagcactaagagcttgctcaagagcatt 628
             ||||| ||||| ||||| || ||||| ||||||||    || || ||||| | ||||||
Sbjct: 798  accagctccagctaatatggtacatgtgacagcagctgatagggcctgctctaaagcatt 739

                                                          
Query: 629  ttcatcaatctcttcatccccaatttgggcgttgctcaatctgaga 674
             |||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 738  ctcatcaatctcttcatcccctattt-ggcgttgctcaatctgaga 694
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>gb|BT025548.1| Arabidopsis thaliana At5g42970 mRNA, complete cds
          Length = 1194

 Score =  170 bits (86), Expect = 4e-39
 Identities = 327/406 (80%), Gaps = 1/406 (0%)
 Strand = Plus / Minus

                                                                        
Query: 269  tgctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaaact 328
            |||||||||||| || ||||| || |||||  ||||||  ||||| |  || ||||| ||
Sbjct: 1014 tgctatcttctccgcttttcttggatcaatcgccaacagagttcccaattcatcaaacct 955

                                                                        
Query: 329  gatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaag 388
             || || ||||| ||||| || |||||||| || |||||||||||||| || ||||||||
Sbjct: 954  tatgtttgtgtagagtttgcttgcactaagaaggttatgctcaatcatagcacggtcaag 895

                                                                        
Query: 389  cacagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgc 448
             ||||| || ||||| |||| |   ||||| ||||| ||| | || || |||| ||| ||
Sbjct: 894  aacagtggatttgtcaggcaaagatgctttctgatgtggccttagttcttctgaaaaggc 835

                                                                        
Query: 449  atcaatttctggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtatat 508
            |||||| |||||| |||| ||||||||||| ||| | ||||||||||| || || || ||
Sbjct: 834  atcaatctctggtctccttaaaatcctttccagatacaccttctgcaggataggataaat 775

                                                                        
Query: 509  cttgagctttgagcatctttcatccttgtacaatgtagcaagaacgcgagagcgttgtgg 568
            ||| ||||| ||||| |  ||||| ||||| || || |||||||| ||||| || || ||
Sbjct: 774  cttcagcttggagcaacgctcatctttgtataaagttgcaagaacacgagaacgctgagg 715

                                                                        
Query: 569  gccagcaccagccaatattgtgcatgttacagcagcactaagagcttgctcaagagcatt 628
             ||||| ||||| ||||| || ||||| ||||||||    || || ||||| | ||||||
Sbjct: 714  accagctccagctaatatggtacatgtgacagcagctgatagggcctgctctaaagcatt 655

                                                          
Query: 629  ttcatcaatctcttcatccccaatttgggcgttgctcaatctgaga 674
             |||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 654  ctcatcaatctcttcatcccctattt-ggcgttgctcaatctgaga 610
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>gb|AF395060.1|AF395060 Arabidopsis thaliana CSN complex subunit 4 (CSN4) mRNA, complete cds
          Length = 1210

 Score =  170 bits (86), Expect = 4e-39
 Identities = 327/406 (80%), Gaps = 1/406 (0%)
 Strand = Plus / Minus

                                                                        
Query: 269  tgctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaaact 328
            |||||||||||| || ||||| || |||||  ||||||  ||||| |  || ||||| ||
Sbjct: 1014 tgctatcttctccgcttttcttggatcaatcgccaacagagttcccaattcatcaaacct 955

                                                                        
Query: 329  gatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaag 388
             || || ||||| ||||| || |||||||| || |||||||||||||| || ||||||||
Sbjct: 954  tatgtttgtgtagagtttgcttgcactaagaaggttatgctcaatcatagcacggtcaag 895

                                                                        
Query: 389  cacagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgc 448
             ||||| || ||||| |||| |   ||||| ||||| ||| | || || |||| ||| ||
Sbjct: 894  aacagtggatttgtcaggcaaagatgctttctgatgtggccttagttcttctgaaaaggc 835

                                                                        
Query: 449  atcaatttctggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtatat 508
            |||||| |||||| |||| ||||||||||| ||| | ||||||||||| || || || ||
Sbjct: 834  atcaatctctggtctccttaaaatcctttccagatacaccttctgcaggataggataaat 775

                                                                        
Query: 509  cttgagctttgagcatctttcatccttgtacaatgtagcaagaacgcgagagcgttgtgg 568
            ||| ||||| ||||| |  ||||| ||||| || || |||||||| ||||| || || ||
Sbjct: 774  cttcagcttggagcaacgctcatctttgtataaagttgcaagaacacgagaacgctgagg 715

                                                                        
Query: 569  gccagcaccagccaatattgtgcatgttacagcagcactaagagcttgctcaagagcatt 628
             ||||| ||||| ||||| || ||||| ||||||||    || || ||||| | ||||||
Sbjct: 714  accagctccagctaatatggtacatgtgacagcagctgatagggcctgctctaaagcatt 655

                                                          
Query: 629  ttcatcaatctcttcatccccaatttgggcgttgctcaatctgaga 674
             |||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 654  ctcatcaatctcttcatcccctattt-ggcgttgctcaatctgaga 610
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>dbj|AK176360.1| Arabidopsis thaliana mRNA for COP8 (constitutive photomorphogenic)
            homolog, complete cds, clone: RAFL24-06-F15
          Length = 1591

 Score =  170 bits (86), Expect = 4e-39
 Identities = 327/406 (80%), Gaps = 1/406 (0%)
 Strand = Plus / Minus

                                                                        
Query: 269  tgctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaaact 328
            |||||||||||| || ||||| || |||||  ||||||  ||||| |  || ||||| ||
Sbjct: 1096 tgctatcttctccgcttttcttggatcaatcgccaacagagttcccaattcatcaaacct 1037

                                                                        
Query: 329  gatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaag 388
             || || ||||| ||||| || |||||||| || |||||||||||||| || ||||||||
Sbjct: 1036 tatgtttgtgtagagtttgcttgcactaagaaggttatgctcaatcatagcacggtcaag 977

                                                                        
Query: 389  cacagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgc 448
             ||||| || ||||| |||| |   ||||| ||||| ||| | || || |||| ||| ||
Sbjct: 976  aacagtggatttgtcaggcaaagatgctttctgatgtggccttagttcttctgaaaaggc 917

                                                                        
Query: 449  atcaatttctggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtatat 508
            |||||| |||||| |||| ||||||||||| ||| | ||||||||||| || || || ||
Sbjct: 916  atcaatctctggtctccttaaaatcctttccagatacaccttctgcaggataggataaat 857

                                                                        
Query: 509  cttgagctttgagcatctttcatccttgtacaatgtagcaagaacgcgagagcgttgtgg 568
            ||| ||||| ||||| |  ||||| ||||| || || |||||||| ||||| || || ||
Sbjct: 856  cttcagcttggagcaacgctcatctttgtataaagttgcaagaacacgagaacgctgagg 797

                                                                        
Query: 569  gccagcaccagccaatattgtgcatgttacagcagcactaagagcttgctcaagagcatt 628
             ||||| ||||| ||||| || ||||| ||||||||    || || ||||| | ||||||
Sbjct: 796  accagctccagctaatatggtacatgtgacagcagctgatagggcctgctctaaagcatt 737

                                                          
Query: 629  ttcatcaatctcttcatccccaatttgggcgttgctcaatctgaga 674
             |||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 736  ctcatcaatctcttcatcccctattt-ggcgttgctcaatctgaga 692
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>gb|AY087068.1| Arabidopsis thaliana clone 31282 mRNA, complete sequence
          Length = 1563

 Score =  163 bits (82), Expect = 1e-36
 Identities = 326/406 (80%), Gaps = 1/406 (0%)
 Strand = Plus / Minus

                                                                        
Query: 269  tgctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaaact 328
            |||||||||||| || ||||| || |||||  ||||||  ||||| |  || ||||| ||
Sbjct: 1098 tgctatcttctccgcttttcttggatcaatcgccaacagagttcccaattcatcaaacct 1039

                                                                        
Query: 329  gatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaag 388
             || || ||||| ||||| || |||||||| || |||||||||||||| || ||||||||
Sbjct: 1038 tatgtttgtgtagagtttgcttgcactaagaaggttatgctcaatcatagcacggtcaag 979

                                                                        
Query: 389  cacagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgc 448
             ||||| || ||||| |||| |   ||||| ||||| ||| | || || |||| ||| ||
Sbjct: 978  aacagtggatttgtcaggcaaagatgctttctgatgtggccttagttcttctgaaaaggc 919

                                                                        
Query: 449  atcaatttctggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtatat 508
            |||||| |||||| |||| ||||||||||| ||| | ||||||||||| || || || ||
Sbjct: 918  atcaatctctggtctccttaaaatcctttccagatacaccttctgcaggataggataaat 859

                                                                        
Query: 509  cttgagctttgagcatctttcatccttgtacaatgtagcaagaacgcgagagcgttgtgg 568
            ||| ||||| ||||| |  ||||| ||||| || || |||||||  ||||| || || ||
Sbjct: 858  cttcagcttggagcaacgctcatctttgtataaagttgcaagaaaacgagaacgctgagg 799

                                                                        
Query: 569  gccagcaccagccaatattgtgcatgttacagcagcactaagagcttgctcaagagcatt 628
             ||||| ||||| ||||| || ||||| ||||||||    || || ||||| | ||||||
Sbjct: 798  accagctccagctaatatggtacatgtgacagcagctgatagggcctgctctaaagcatt 739

                                                          
Query: 629  ttcatcaatctcttcatccccaatttgggcgttgctcaatctgaga 674
             |||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 738  ctcatcaatctcttcatcccctattt-ggcgttgctcaatctgaga 694
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                           
Query: 532     ccttgtacaatgtagcaagaacgcgagagcgttgtgggccagcaccagccaatattgtgc 591
               |||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||
Sbjct: 5089991 ccttgtacaatgtagcaagaacacgagatcgttgcggaccagcaccagccaatattgtgc 5090050

                                                                 
Query: 592     atgttacagcagcactaagagcttgctcaagagcattttcatcaatctct 641
               |||| ||||||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 5090051 atgtcacagcagcactaagagcttgctccaaagcattttcatcgatctct 5090100



 Score =  127 bits (64), Expect = 5e-26
 Identities = 76/80 (95%)
 Strand = Plus / Plus

                                                                           
Query: 327     ctgatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtca 386
               |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 5088913 ctgatattagtgtaaagtttactggcactaaggaggttatgctcaatcattgcccggtca 5088972

                                   
Query: 387     agcacagtagacttgtctgg 406
               |||||||||||||| |||||
Sbjct: 5088973 agcacagtagacttatctgg 5088992



 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                           
Query: 419     ttgatgcggcttcagctcctctgcaaatgcatcaatttctggtttcctcaaaatcctttc 478
               |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5089087 ttgatgcggtctcagctcctctgcaaatgcttcaatttctggtttcctcaaaatcctttc 5089146

                          
Query: 479     aagaaaaacct 489
               |||||| ||||
Sbjct: 5089147 aagaaagacct 5089157



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                           
Query: 164     ctgttggtcccactgctgcaacccttcantgtcatcctcaaagtgtatcacagcttcaac 223
               |||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 5088190 ctgttggtcccactgctgcagctcttcagtgtcatcctcaaaatgtatcacagcttcaac 5088249

                  
Query: 224     ctg 226
               |||
Sbjct: 5088250 ctg 5088252



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                           
Query: 88      ctcagacaggtatcgcgattcccttgctcgacatgctgtcaaggatgtcgttcaacgctt 147
               |||| ||||| || || ||||||||||| ||||||||||| || |||||||||| |||||
Sbjct: 5087813 ctcacacaggaatagccattcccttgcttgacatgctgtccagaatgtcgttcagcgctt 5087872

                                  
Query: 148     ggcacagcccagcaatctg 166
               ||||||| || ||||||||
Sbjct: 5087873 ggcacagtcccgcaatctg 5087891



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                
Query: 486     accttctgcagtattgggtatatcttgagctttgagcatctttcatcct 534
               |||||||||||||||||||||||||| | |||||||||||| |||||||
Sbjct: 5089239 accttctgcagtattgggtatatcttcaactttgagcatctctcatcct 5089287



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                           
Query: 221     aacctgatcaattgaaccccgcattctatcttcacagatcattcgacatgctatcttctc 280
               |||||||||||||||||| ||||| ||||||||| | ||||||||  |||||||||| ||
Sbjct: 5088405 aacctgatcaattgaacctcgcatcctatcttcataaatcattcgcgatgctatcttttc 5088464

                    
Query: 281     agcct 285
               |||||
Sbjct: 5088465 agcct 5088469



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                                  
Query: 656     ggcgttgctcaatctgagagataccatagtattcgaagtgcagcttccaag 706
               ||||||| ||||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 5090375 ggcgttgttcaatctgagagatgtcatagta-tcgaagtgcagcttccaag 5090424



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 283     cctttctagggtcaatgcccaacaatgttccaagctcctcaaa 325
               |||| ||||||||||||||||| |||| ||||||||| |||||
Sbjct: 5088794 ccttcctagggtcaatgcccaataatgctccaagctcatcaaa 5088836
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>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                         
Query: 532   ccttgtacaatgtagcaagaacgcgagagcgttgtgggccagcaccagccaatattgtgc 591
             |||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||
Sbjct: 79714 ccttgtacaatgtagcaagaacacgagatcgttgcggaccagcaccagccaatattgtgc 79655

                                                               
Query: 592   atgttacagcagcactaagagcttgctcaagagcattttcatcaatctct 641
             |||| ||||||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 79654 atgtcacagcagcactaagagcttgctccaaagcattttcatcgatctct 79605



 Score =  127 bits (64), Expect = 5e-26
 Identities = 76/80 (95%)
 Strand = Plus / Minus

                                                                         
Query: 327   ctgatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtca 386
             |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 80792 ctgatattagtgtaaagtttactggcactaaggaggttatgctcaatcattgcccggtca 80733

                                 
Query: 387   agcacagtagacttgtctgg 406
             |||||||||||||| |||||
Sbjct: 80732 agcacagtagacttatctgg 80713



 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Minus

                                                                         
Query: 419   ttgatgcggcttcagctcctctgcaaatgcatcaatttctggtttcctcaaaatcctttc 478
             |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 80618 ttgatgcggtctcagctcctctgcaaatgcttcaatttctggtttcctcaaaatcctttc 80559

                        
Query: 479   aagaaaaacct 489
             |||||| ||||
Sbjct: 80558 aagaaagacct 80548



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                         
Query: 164   ctgttggtcccactgctgcaacccttcantgtcatcctcaaagtgtatcacagcttcaac 223
             |||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 81515 ctgttggtcccactgctgcagctcttcagtgtcatcctcaaaatgtatcacagcttcaac 81456

                
Query: 224   ctg 226
             |||
Sbjct: 81455 ctg 81453



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                         
Query: 88    ctcagacaggtatcgcgattcccttgctcgacatgctgtcaaggatgtcgttcaacgctt 147
             |||| ||||| || || ||||||||||| ||||||||||| || |||||||||| |||||
Sbjct: 81892 ctcacacaggaatagccattcccttgcttgacatgctgtccagaatgtcgttcagcgctt 81833

                                
Query: 148   ggcacagcccagcaatctg 166
             ||||||| || ||||||||
Sbjct: 81832 ggcacagtcccgcaatctg 81814



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                         
Query: 221   aacctgatcaattgaaccccgcattctatcttcacagatcattcgacatgctatcttctc 280
             |||||||||||||||||| ||||| ||||||||| | ||||||||  |||||||||| ||
Sbjct: 81300 aacctgatcaattgaacctcgcatcctatcttcataaatcattcgcgatgctatcttttc 81241

                  
Query: 281   agcct 285
             |||||
Sbjct: 81240 agcct 81236



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                              
Query: 486   accttctgcagtattgggtatatcttgagctttgagcatctttcatcct 534
             |||||||||||||||||||||||||| | |||||||||||| |||||||
Sbjct: 80466 accttctgcagtattgggtatatcttcaactttgagcatctctcatcct 80418



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                
Query: 656   ggcgttgctcaatctgagagataccatagtattcgaagtgcagcttccaag 706
             ||||||| ||||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 79330 ggcgttgttcaatctgagagatgtcatagta-tcgaagtgcagcttccaag 79281



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 283   cctttctagggtcaatgcccaacaatgttccaagctcctcaaa 325
             |||| ||||||||||||||||| |||| ||||||||| |||||
Sbjct: 80911 ccttcctagggtcaatgcccaataatgctccaagctcatcaaa 80869
to top
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                          
Query: 532    ccttgtacaatgtagcaagaacgcgagagcgttgtgggccagcaccagccaatattgtgc 591
              |||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||
Sbjct: 166527 ccttgtacaatgtagcaagaacacgagatcgttgcggaccagcaccagccaatattgtgc 166468

                                                                
Query: 592    atgttacagcagcactaagagcttgctcaagagcattttcatcaatctct 641
              |||| ||||||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 166467 atgtcacagcagcactaagagcttgctccaaagcattttcatcgatctct 166418



 Score =  127 bits (64), Expect = 5e-26
 Identities = 76/80 (95%)
 Strand = Plus / Minus

                                                                          
Query: 327    ctgatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtca 386
              |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 167605 ctgatattagtgtaaagtttactggcactaaggaggttatgctcaatcattgcccggtca 167546

                                  
Query: 387    agcacagtagacttgtctgg 406
              |||||||||||||| |||||
Sbjct: 167545 agcacagtagacttatctgg 167526



 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Minus

                                                                          
Query: 419    ttgatgcggcttcagctcctctgcaaatgcatcaatttctggtttcctcaaaatcctttc 478
              |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 167431 ttgatgcggtctcagctcctctgcaaatgcttcaatttctggtttcctcaaaatcctttc 167372

                         
Query: 479    aagaaaaacct 489
              |||||| ||||
Sbjct: 167371 aagaaagacct 167361



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                          
Query: 164    ctgttggtcccactgctgcaacccttcantgtcatcctcaaagtgtatcacagcttcaac 223
              |||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 168328 ctgttggtcccactgctgcagctcttcagtgtcatcctcaaaatgtatcacagcttcaac 168269

                 
Query: 224    ctg 226
              |||
Sbjct: 168268 ctg 168266



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                          
Query: 88     ctcagacaggtatcgcgattcccttgctcgacatgctgtcaaggatgtcgttcaacgctt 147
              |||| ||||| || || ||||||||||| ||||||||||| || |||||||||| |||||
Sbjct: 168705 ctcacacaggaatagccattcccttgcttgacatgctgtccagaatgtcgttcagcgctt 168646

                                 
Query: 148    ggcacagcccagcaatctg 166
              ||||||| || ||||||||
Sbjct: 168645 ggcacagtcccgcaatctg 168627



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                          
Query: 221    aacctgatcaattgaaccccgcattctatcttcacagatcattcgacatgctatcttctc 280
              |||||||||||||||||| ||||| ||||||||| | ||||||||  |||||||||| ||
Sbjct: 168113 aacctgatcaattgaacctcgcatcctatcttcataaatcattcgcgatgctatcttttc 168054

                   
Query: 281    agcct 285
              |||||
Sbjct: 168053 agcct 168049



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                               
Query: 486    accttctgcagtattgggtatatcttgagctttgagcatctttcatcct 534
              |||||||||||||||||||||||||| | |||||||||||| |||||||
Sbjct: 167279 accttctgcagtattgggtatatcttcaactttgagcatctctcatcct 167231



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 656    ggcgttgctcaatctgagagataccatagtattcgaagtgcagcttccaag 706
              ||||||| ||||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 166143 ggcgttgttcaatctgagagatgtcatagta-tcgaagtgcagcttccaag 166094



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 283    cctttctagggtcaatgcccaacaatgttccaagctcctcaaa 325
              |||| ||||||||||||||||| |||| ||||||||| |||||
Sbjct: 167724 ccttcctagggtcaatgcccaataatgctccaagctcatcaaa 167682
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>gb|AF176089.1|AF176089 Arabidopsis thaliana COP8 mRNA, complete cds
          Length = 1194

 Score =  155 bits (78), Expect = 2e-34
 Identities = 325/406 (80%), Gaps = 1/406 (0%)
 Strand = Plus / Minus

                                                                        
Query: 269  tgctatcttctcagcctttctagggtcaatgcccaacaatgttccaagctcctcaaaact 328
            |||||||||||| || ||||| || |||||  ||||||  ||||| |  || ||||| ||
Sbjct: 1014 tgctatcttctccgcttttcttggatcaatcgccaacagagttcccaattcatcaaacct 955

                                                                        
Query: 329  gatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaag 388
             || || ||||| ||||| || |||||||| || |||||||||||||  || ||||||||
Sbjct: 954  tatgtttgtgtagagtttgcttgcactaagaaggttatgctcaatcacagcacggtcaag 895

                                                                        
Query: 389  cacagtagacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgc 448
             ||||| || ||||| |||| |   ||||| ||||| ||  | || || |||| ||| ||
Sbjct: 894  aacagtggatttgtcaggcaaagatgctttctgatgtggtcttagttcttctgaaaaggc 835

                                                                        
Query: 449  atcaatttctggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtatat 508
            |||||| |||||| |||| ||||||||||| ||| | ||||||||||| || || || ||
Sbjct: 834  atcaatctctggtctccttaaaatcctttccagatacaccttctgcaggataggataaat 775

                                                                        
Query: 509  cttgagctttgagcatctttcatccttgtacaatgtagcaagaacgcgagagcgttgtgg 568
            ||| ||||| ||||| |  ||||| ||||| || || |||||||| ||||| || || ||
Sbjct: 774  cttcagcttggagcaacgctcatctttgtataaagttgcaagaacacgagaacgctgagg 715

                                                                        
Query: 569  gccagcaccagccaatattgtgcatgttacagcagcactaagagcttgctcaagagcatt 628
             ||||| ||||| ||||| || ||||| ||||||||    || || ||||| | ||||||
Sbjct: 714  accagctccagctaatatggtacatgtgacagcagctgatagggcctgctctaaagcatt 655

                                                          
Query: 629  ttcatcaatctcttcatccccaatttgggcgttgctcaatctgaga 674
             |||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 654  ctcatcaatctcttcatcccctattt-ggcgttgctcaatctgaga 610
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                           
Query: 532     ccttgtacaatgtagcaagaacgcgagagcgttgtgggccagcaccagccaatattgtgc 591
               |||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||
Sbjct: 5089208 ccttgtacaatgtagcaagaacacgagatcgttgcggaccagcaccagccaatattgtgc 5089267

                                                                 
Query: 592     atgttacagcagcactaagagcttgctcaagagcattttcatcaatctct 641
               |||| ||||||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 5089268 atgtcacagcagcactaagagcttgctccaaagcattttcatcgatctct 5089317



 Score =  127 bits (64), Expect = 5e-26
 Identities = 76/80 (95%)
 Strand = Plus / Plus

                                                                           
Query: 327     ctgatattggtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtca 386
               |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 5088130 ctgatattagtgtaaagtttactggcactaaggaggttatgctcaatcattgcccggtca 5088189

                                   
Query: 387     agcacagtagacttgtctgg 406
               |||||||||||||| |||||
Sbjct: 5088190 agcacagtagacttatctgg 5088209



 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                           
Query: 419     ttgatgcggcttcagctcctctgcaaatgcatcaatttctggtttcctcaaaatcctttc 478
               |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5088304 ttgatgcggtctcagctcctctgcaaatgcttcaatttctggtttcctcaaaatcctttc 5088363

                          
Query: 479     aagaaaaacct 489
               |||||| ||||
Sbjct: 5088364 aagaaagacct 5088374



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                           
Query: 164     ctgttggtcccactgctgcaacccttcantgtcatcctcaaagtgtatcacagcttcaac 223
               |||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 5087407 ctgttggtcccactgctgcagctcttcagtgtcatcctcaaaatgtatcacagcttcaac 5087466

                  
Query: 224     ctg 226
               |||
Sbjct: 5087467 ctg 5087469



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                           
Query: 88      ctcagacaggtatcgcgattcccttgctcgacatgctgtcaaggatgtcgttcaacgctt 147
               |||| ||||| || || ||||||||||| ||||||||||| || |||||||||| |||||
Sbjct: 5087030 ctcacacaggaatagccattcccttgcttgacatgctgtccagaatgtcgttcagcgctt 5087089

                                  
Query: 148     ggcacagcccagcaatctg 166
               ||||||| || ||||||||
Sbjct: 5087090 ggcacagtcccgcaatctg 5087108



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                
Query: 486     accttctgcagtattgggtatatcttgagctttgagcatctttcatcct 534
               |||||||||||||||||||||||||| | |||||||||||| |||||||
Sbjct: 5088456 accttctgcagtattgggtatatcttcaactttgagcatctctcatcct 5088504



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                           
Query: 221     aacctgatcaattgaaccccgcattctatcttcacagatcattcgacatgctatcttctc 280
               |||||||||||||||||| ||||| ||||||||| | ||||||||  |||||||||| ||
Sbjct: 5087622 aacctgatcaattgaacctcgcatcctatcttcataaatcattcgcgatgctatcttttc 5087681

                    
Query: 281     agcct 285
               |||||
Sbjct: 5087682 agcct 5087686



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                                  
Query: 656     ggcgttgctcaatctgagagataccatagtattcgaagtgcagcttccaag 706
               ||||||| ||||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 5089592 ggcgttgttcaatctgagagatgtcatagta-tcgaagtgcagcttccaag 5089641



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 283     cctttctagggtcaatgcccaacaatgttccaagctcctcaaa 325
               |||| ||||||||||||||||| |||| ||||||||| |||||
Sbjct: 5088011 ccttcctagggtcaatgcccaataatgctccaagctcatcaaa 5088053
to top
>emb|BX833730.1|CNS0A0AV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL74ZB02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 614

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 153/188 (81%)
 Strand = Plus / Minus

                                                                       
Query: 336 gtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaagcacagta 395
           ||||| ||||| || |||||||| || |||||||||||||| || |||||||| ||||| 
Sbjct: 193 gtgtagagtttgcttgcactaagaaggttatgctcaatcatagcacggtcaagaacagtg 134

                                                                       
Query: 396 gacttgtctggcagaagggctttttgatgcggcttcagctcctctgcaaatgcatcaatt 455
           || ||||| |||| |   ||||| ||||| ||| | || || |||| ||| |||||||| 
Sbjct: 133 gatttgtcaggcaaagatgctttctgatgtggccttagttcttctgaaaaggcatcaatc 74

                                                                       
Query: 456 tctggtttcctcaaaatcctttcaagaaaaaccttctgcagtattgggtatatcttgagc 515
           |||||| |||| ||||||||||| ||| | ||||||||||| || || || ||||| |||
Sbjct: 73  tctggtctccttaaaatcctttccagatacaccttctgcaggataggataaatcttcagc 14

                   
Query: 516 tttgagca 523
           || |||||
Sbjct: 13  ttggagca 6
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>dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBD2
          Length = 79976

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 336   gtgtaaagtttactggcactaaggagattatgctcaatcatcgcccggtcaagcacagta 395
             ||||| ||||| || |||||||| || |||||||||||||| || |||||||| ||||| 
Sbjct: 66938 gtgtagagtttgcttgcactaagaaggttatgctcaatcatagcacggtcaagaacagtg 66997

                          
Query: 396   gacttgtctggca 408
             || ||||| ||||
Sbjct: 66998 gatttgtcaggca 67010



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 642   tcatccccaatttgggcgttgctcaatctgaga 674
             |||||||| |||||| |||||||||||||||||
Sbjct: 67890 tcatcccctatttgg-cgttgctcaatctgaga 67921



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 438   tctgcaaatgcatcaatttctggtttcctcaaaatcctttc 478
             |||| ||| |||||||| |||||| |||| |||||||||||
Sbjct: 67137 tctgaaaaggcatcaatctctggtctccttaaaatcctttc 67177



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 77/96 (80%)
 Strand = Plus / Plus

                                                                         
Query: 546   gcaagaacgcgagagcgttgtgggccagcaccagccaatattgtgcatgttacagcagca 605
             |||||||| ||||| || || || ||||| ||||| ||||| || ||||| |||||||| 
Sbjct: 67553 gcaagaacacgagaacgctgaggaccagctccagctaatatggtacatgtgacagcagct 67612

                                                 
Query: 606   ctaagagcttgctcaagagcattttcatcaatctct 641
                || || ||||| | |||||| ||||||||||||
Sbjct: 67613 gatagggcctgctctaaagcattctcatcaatctct 67648
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>gb|AC092853.18| Mus musculus strain 129/SvJ clone mgs1-271d8 map X, complete sequence
          Length = 203118

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 451    caatttctggtttcctcaaaatcctttc 478
              |||||||||||| |||||||||||||||
Sbjct: 186054 caatttctggttccctcaaaatcctttc 186027
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>emb|AL671856.16| Mouse DNA sequence from clone RP23-328E8 on chromosome X, complete
             sequence
          Length = 121240

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 451   caatttctggtttcctcaaaatcctttc 478
             |||||||||||| |||||||||||||||
Sbjct: 78410 caatttctggttccctcaaaatcctttc 78383
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 610     gagcttgctcaagagcattttc 631
               ||||||||||||||||||||||
Sbjct: 2193472 gagcttgctcaagagcattttc 2193493
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>gb|DQ437743.1| Pseudomonas aeruginosa strain 19660 ExoU Island B, complete sequence
          Length = 30407

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 612  gcttgctcaagagcattttcatcaat 637
            |||||||||||||||||| |||||||
Sbjct: 5666 gcttgctcaagagcatttacatcaat 5691
to top
>gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete sequence
          Length = 128294

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 327    ctgatattggtgtaaagtttactggcactaaggagattatgctcaatcat 376
              |||||||| || |||||||| || |||||  | |||||||||||||||||
Sbjct: 128027 ctgatattagtataaagtttgcttgcactttgaagattatgctcaatcat 127978
to top
>emb|AL669998.1|NCB1K11 Neurospora crassa DNA linkage group II BAC clone B1K11
          Length = 88013

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 492   tgcagtattgggtatatcttgagct 516
             |||||||||||||||||| ||||||
Sbjct: 79133 tgcagtattgggtatatcgtgagct 79157
to top
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 54      aggtaccatcgaaactaccgg 74
               |||||||||||||||||||||
Sbjct: 2976112 aggtaccatcgaaactaccgg 2976132
to top
>gb|AC013727.7| Homo sapiens BAC clone RP11-451G1 from 2, complete sequence
          Length = 167519

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 466   tcaaaatcctttcaagaaaaa 486
             |||||||||||||||||||||
Sbjct: 95877 tcaaaatcctttcaagaaaaa 95857
to top
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 438     tctgcaaatgcatcaatttct 458
               |||||||||||||||||||||
Sbjct: 2527523 tctgcaaatgcatcaatttct 2527543
to top
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 54      aggtaccatcgaaactaccgg 74
               |||||||||||||||||||||
Sbjct: 1319848 aggtaccatcgaaactaccgg 1319828
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>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome
          Length = 1197687

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 573    gcaccagccaatattgtgcat 593
              |||||||||||||||||||||
Sbjct: 234807 gcaccagccaatattgtgcat 234787
to top
>ref|XM_367405.1| Magnaporthe grisea 70-15 hypothetical protein (MG07330.4) partial
           mRNA
          Length = 537

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 ggcagaagggctttttgatg 424
           ||||||||||||||||||||
Sbjct: 75  ggcagaagggctttttgatg 94
to top
>gb|AC122118.7| Mus musculus chromosome 18, clone RP24-225P17, complete sequence
          Length = 190301

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   agcacagtagacttgtctgg 406
             ||||||||||||||||||||
Sbjct: 71778 agcacagtagacttgtctgg 71759
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>ref|XM_818006.1| Trypanosoma brucei TREU927 GTPase activating protein
           (Tb10.6k15.1790) partial mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 637 tctcttcatccccaatttgg 656
           ||||||||||||||||||||
Sbjct: 547 tctcttcatccccaatttgg 528
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>gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome 18, complete sequence
          Length = 215826

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   agcacagtagacttgtctgg 406
             ||||||||||||||||||||
Sbjct: 28052 agcacagtagacttgtctgg 28071
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>ref|XM_735954.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000752.03.0)
           partial mRNA
          Length = 1692

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 627 ttttcatcaatctcttcatc 646
           ||||||||||||||||||||
Sbjct: 743 ttttcatcaatctcttcatc 724
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>gb|AC004874.1| Homo sapiens PAC clone RP4-744D13 from 7, complete sequence
          Length = 95983

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   cttcagctcctctgcaaatg 447
             ||||||||||||||||||||
Sbjct: 72932 cttcagctcctctgcaaatg 72913
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>gb|AC142288.1| Pan troglodytes BAC clone RP43-178D12 from 7, complete sequence
          Length = 187294

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   aggagattatgctcaatcat 376
             ||||||||||||||||||||
Sbjct: 71715 aggagattatgctcaatcat 71734
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>gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete sequence
          Length = 104281

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 519   gagcatctttcatccttgta 538
             ||||||||||||||||||||
Sbjct: 21242 gagcatctttcatccttgta 21223
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>emb|CR788305.17| Zebrafish DNA sequence from clone DKEYP-59G5 in linkage group 20,
              complete sequence
          Length = 187351

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 590    gcatgttacagcagcactaa 609
              ||||||||||||||||||||
Sbjct: 134378 gcatgttacagcagcactaa 134397
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>emb|AL445214.7| Human DNA sequence from clone RP11-208F1 on chromosome 9 Contains the
             5' end of the INVS gene for inversin and the 3' end of a
             novel gene (FLJ20287), complete sequence
          Length = 41150

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 329   gatattggtgtaaagtttactggcacta 356
             ||||| ||| ||||||||||||||||||
Sbjct: 34188 gatatgggtataaagtttactggcacta 34215
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>emb|AL669837.3| Mouse DNA sequence from clone RP23-219P13 on chromosome 11 Contains the
             Hus1 gene for Hus1 homolog (S. pombe), the gene for a
             novel protein similar to  sperm associated antigen 4
             (Spag4), a novel gene and a CpG island, complete sequence
          Length = 113836

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   aaaatcctttcaagaaaaac 487
             ||||||||||||||||||||
Sbjct: 79827 aaaatcctttcaagaaaaac 79808
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>emb|AL033528.20|HS125I3 Human DNA sequence from clone RP1-125I3 on chromosome 1p35.1-36.11,
             complete sequence
          Length = 83111

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   acaatgttccaagctcctca 323
             ||||||||||||||||||||
Sbjct: 12121 acaatgttccaagctcctca 12102
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>dbj|AK157183.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830206D12 product:unclassifiable, full
            insert sequence
          Length = 2730

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  gtcccactgctgcaaccctt 189
            ||||||||||||||||||||
Sbjct: 1106 gtcccactgctgcaaccctt 1125
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 317      ctcctcaaaactgatattgg 336
                ||||||||||||||||||||
Sbjct: 15388159 ctcctcaaaactgatattgg 15388140
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 317      ctcctcaaaactgatattgg 336
                ||||||||||||||||||||
Sbjct: 29599626 ctcctcaaaactgatattgg 29599607
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>ref|XM_394516.2| PREDICTED: Apis mellifera similar to ENSANGP00000021505
           (LOC411043), mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  aaattccctcagacaggtat 100
           ||||||||||||||||||||
Sbjct: 595 aaattccctcagacaggtat 614
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 317      ctcctcaaaactgatattgg 336
                ||||||||||||||||||||
Sbjct: 20887909 ctcctcaaaactgatattgg 20887928
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>gb|AC008245.6| Homo sapiens chromosome 18, clone RP11-146N18, complete sequence
          Length = 183749

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 525   ctttcatccttgtacaatgt 544
             ||||||||||||||||||||
Sbjct: 75846 ctttcatccttgtacaatgt 75827
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>dbj|AP001724.1| Homo sapiens genomic DNA, chromosome 21q, section 68/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    atcaatttctggtttcctca 468
              ||||||||||||||||||||
Sbjct: 285644 atcaatttctggtttcctca 285663
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>dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1110C07
          Length = 173859

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    ctcctcaaaactgatattgg 336
              ||||||||||||||||||||
Sbjct: 106351 ctcctcaaaactgatattgg 106370
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>gb|AC121540.14| Mus musculus chromosome 3, clone RP23-48L9, complete sequence
          Length = 224634

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    ccgcattctatcttcacaga 258
              ||||||||||||||||||||
Sbjct: 194048 ccgcattctatcttcacaga 194029
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>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1299_A11
          Length = 160099

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ctcctcaaaactgatattgg 336
             ||||||||||||||||||||
Sbjct: 37451 ctcctcaaaactgatattgg 37432
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>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1479_B12
          Length = 127089

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ctcctcaaaactgatattgg 336
             ||||||||||||||||||||
Sbjct: 57347 ctcctcaaaactgatattgg 57328
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>emb|BX537259.24| Zebrafish DNA sequence from clone CH211-241P10 in linkage group 20,
             complete sequence
          Length = 185460

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   gcatgttacagcagcactaa 609
             ||||||||||||||||||||
Sbjct: 24259 gcatgttacagcagcactaa 24240
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>gb|AC005582.1|AC005582 Homo sapiens clone UWGC:g1211a049 from 7p14-15, complete sequence
          Length = 43482

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   aggagattatgctcaatcat 376
             ||||||||||||||||||||
Sbjct: 41356 aggagattatgctcaatcat 41337
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>gb|AC155158.15| Mus musculus chromosome 3, clone RP24-70L3, complete sequence
          Length = 240767

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 ccgcattctatcttcacaga 258
           ||||||||||||||||||||
Sbjct: 62  ccgcattctatcttcacaga 43
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>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete
              sequence
          Length = 192913

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     gggtggacaaattccctcag 92
              ||||||||||||||||||||
Sbjct: 119211 gggtggacaaattccctcag 119230
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>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence
          Length = 219361

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     gggtggacaaattccctcag 92
              ||||||||||||||||||||
Sbjct: 106887 gggtggacaaattccctcag 106906
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>emb|AL662804.18| Mouse DNA sequence from clone RP23-341C5 on chromosome 11, complete
              sequence
          Length = 223438

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    gtcccactgctgcaaccctt 189
              ||||||||||||||||||||
Sbjct: 214015 gtcccactgctgcaaccctt 214034
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>dbj|AP000688.1| Homo sapiens genomic DNA, chromosome 21q22.2, PAC clone:P27A22, CBR1-HLCS
              region
          Length = 171703

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    atcaatttctggtttcctca 468
              ||||||||||||||||||||
Sbjct: 100830 atcaatttctggtttcctca 100849
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>dbj|AB003151.1| Homo sapiens DNA, chromosome 21q22.2, PAC clone 25P16 complete
             sequence, encoding carbonyl reductase and carbonyl
             reductase 3 (complete cds)
          Length = 170529

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 449   atcaatttctggtttcctca 468
             ||||||||||||||||||||
Sbjct: 35652 atcaatttctggtttcctca 35671


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,938,406
Number of Sequences: 3902068
Number of extensions: 5938406
Number of successful extensions: 111492
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111108
Number of HSP's gapped (non-prelim): 358
length of query: 706
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 683
effective length of database: 17,143,297,704
effective search space: 11708872331832
effective search space used: 11708872331832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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