>gb|AC068287.5| Homo sapiens BAC clone RP11-532L9 from 2, complete sequence
          Length = 160222

 Score = 42.1 bits (21), Expect = 0.093
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     agcaaagccatgattaaaact 46
              |||||||||||||||||||||
Sbjct: 128460 agcaaagccatgattaaaact 128480

>gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome 16, complete sequence
          Length = 189550

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    gcaaagccatgattaaaact 46
             ||||||||||||||||||||
Sbjct: 26281 gcaaagccatgattaaaact 26300

>gb|AC112968.11| Mus musculus chromosome 1, clone RP24-273P12, complete sequence
          Length = 181519

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     agcaaagccatgattaaaa 44
              |||||||||||||||||||
Sbjct: 116050 agcaaagccatgattaaaa 116032

>emb|CR937048.1|RN139I21 Rattus norvegicus chromosome 1 BAC CH230-139I21, complete sequence
          Length = 212885

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    ctgccggagcaaagccatg 37
             |||||||||||||||||||
Sbjct: 60926 ctgccggagcaaagccatg 60944

>gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, complete sequence
          Length = 197295

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    gagcaaagccatgattaaa 43
             |||||||||||||||||||
Sbjct: 67500 gagcaaagccatgattaaa 67482

>gb|AC122721.2| Homo sapiens chromosome 5 clone RP11-91I13, complete sequence
          Length = 137867

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 27    gcaaagccatgattaaaac 45
             |||||||||||||||||||
Sbjct: 90439 gcaaagccatgattaaaac 90457

>gb|AC010596.8| Homo sapiens chromosome 5 clone CTC-483B24, complete sequence
          Length = 165193

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 27   gcaaagccatgattaaaac 45
            |||||||||||||||||||
Sbjct: 6545 gcaaagccatgattaaaac 6563

>ref|XM_581896.2| PREDICTED: Bos taurus similar to GTP-binding protein Di-Ras2
          (Distinct subgroup of the Ras family member 2)
          (LOC538667), mRNA
          Length = 678

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                
Query: 20 tgccggagcaaagccatgatta 41
          |||||||||||||| |||||||
Sbjct: 32 tgccggagcaaagcaatgatta 53

>emb|AL646098.9| Mouse DNA sequence from clone RP23-107I24 on chromosome 11, complete
              sequence
          Length = 200222

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 24     ggagcaaagccatgatta 41
              ||||||||||||||||||
Sbjct: 116656 ggagcaaagccatgatta 116673

>gb|BC109493.1| Bos taurus cDNA clone IMAGE:8048915, partial cds
          Length = 713

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 20  tgccggagcaaagccatgatta 41
           |||||||||||||| |||||||
Sbjct: 613 tgccggagcaaagcaatgatta 592

>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 29     aaagccatgattaaaact 46
              ||||||||||||||||||
Sbjct: 557424 aaagccatgattaaaact 557441

>emb|AL683854.20| Mouse DNA sequence from clone RP23-237K13 on chromosome 4, complete
              sequence
          Length = 234724

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 23     cggagcaaagccatgatt 40
              ||||||||||||||||||
Sbjct: 128592 cggagcaaagccatgatt 128575


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 233,412
Number of Sequences: 3902068
Number of extensions: 233412
Number of successful extensions: 57355
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57328
Number of HSP's gapped (non-prelim): 27
length of query: 46
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 26
effective length of database: 17,155,003,908
effective search space: 446030101608
effective search space used: 446030101608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)