ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9g04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK066648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071E21, full insert sequence Length = 1762 Score = 355 bits (179), Expect = 1e-94 Identities = 352/407 (86%), Gaps = 2/407 (0%) Strand = Plus / Minus Query: 272 tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttc 331 ||||||| ||||| ||||| ||||||||||| | ||||||||| |||||||||||||||| Sbjct: 1453 tctaatattcttcagcagcactggcagcactcaaatcgacactgagatcaacagtctttc 1394 Query: 332 cagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtgg 391 |||| |||||||| |||||||||||||| |||||||| ||||||||||| || || |||| Sbjct: 1393 cagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgtggtgg 1334 Query: 392 cgtcataactcgatgagacaaagcaattatcgagagaaggttcattgactggttcatatc 451 | ||||| || | ||||||||| || ||||| ||||| || ||||| || |||||||||| Sbjct: 1333 catcatagctagttgagacaaaacagttatcaagagatggctcattcacgggttcatatc 1274 Query: 452 tgtcatacatatcaaaaaacaattcatctactggaccaagtagatcaattccaggctttt 511 | ||||| |||||||| || | ||||||||| |||||||||||||||| |||||| ||| Sbjct: 1273 tatcatagatatcaaagaatagctcatctacttgaccaagtagatcaatcccaggc-ttt 1215 Query: 512 agttcagactgtgggttatcagtctccgcttcggcagacacaaacgcaatgaacttccct 571 || ||||||| ||| | |||||||| ||||| | ||||||||| ||||||||||||||| Sbjct: 1214 agctcagactctggatggtcagtctctgcttctgtagacacaaatgcaatgaacttccct 1155 Query: 572 tttggcgcgacattgtgagtgtacgagcaacagaagacatacatgtctgacttgcgccca 631 ||||| || |||||||| ||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 1154 tttggagcaacattgtgtgtgtatgagcaaccgaagacatacatgtctgacttgcgtcca 1095 Query: 632 agttgctttttgtggtaaaataatctgaaccgagtgggaatcatttg 678 ||||| ||| ||||| ||||||||||| || ||||| || ||||||| Sbjct: 1094 agttg-tttctgtggcaaaataatctggactgagtgcgagtcatttg 1049
>gb|AF016896.1|AF016896 Oryza sativa GDP dissociation inhibitor protein OsGDI1 (OsGDI1) mRNA, complete cds Length = 1770 Score = 347 bits (175), Expect = 3e-92 Identities = 351/407 (86%), Gaps = 2/407 (0%) Strand = Plus / Minus Query: 272 tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttc 331 ||||||| | ||| ||||| ||||||||||| | ||||||||| |||||||||||||||| Sbjct: 1429 tctaatatttttcagcagcactggcagcactcaaatcgacactgagatcaacagtctttc 1370 Query: 332 cagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtgg 391 |||| |||||||| |||||||||||||| |||||||| ||||||||||| || || |||| Sbjct: 1369 cagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgtggtgg 1310 Query: 392 cgtcataactcgatgagacaaagcaattatcgagagaaggttcattgactggttcatatc 451 | ||||| || | ||||||||| || ||||| ||||| || ||||| || |||||||||| Sbjct: 1309 catcatagctagttgagacaaaacagttatcaagagatggctcattcacgggttcatatc 1250 Query: 452 tgtcatacatatcaaaaaacaattcatctactggaccaagtagatcaattccaggctttt 511 | ||||| |||||||| || | ||||||||| |||||||||||||||| |||||| ||| Sbjct: 1249 tatcatagatatcaaagaatagctcatctacttgaccaagtagatcaatcccaggc-ttt 1191 Query: 512 agttcagactgtgggttatcagtctccgcttcggcagacacaaacgcaatgaacttccct 571 || ||||||| ||| | |||||||| ||||| | ||||||||| ||||||||||||||| Sbjct: 1190 agctcagactctggatggtcagtctctgcttctgtagacacaaatgcaatgaacttccct 1131 Query: 572 tttggcgcgacattgtgagtgtacgagcaacagaagacatacatgtctgacttgcgccca 631 ||||| || |||||||| ||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 1130 tttggagcaacattgtgtgtgtatgagcaaccgaagacatacatgtctgacttgcgtcca 1071 Query: 632 agttgctttttgtggtaaaataatctgaaccgagtgggaatcatttg 678 ||||| ||| ||||| ||||||||||| || ||||| || ||||||| Sbjct: 1070 agttg-tttctgtggcaaaataatctggactgagtgcgagtcatttg 1025
>gb|AF016897.1|AF016897 Oryza sativa GDP dissociation inhibitor protein OsGDI2 (OsGDI2) mRNA, complete cds Length = 1770 Score = 341 bits (172), Expect = 2e-90 Identities = 351/408 (86%), Gaps = 2/408 (0%) Strand = Plus / Minus Query: 271 atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtcttt 330 |||||||| ||||| || || ||||||||||| | ||| ||||| |||||||||| |||| Sbjct: 1440 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacagccttt 1381 Query: 331 ccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtg 390 || || |||| ||| ||||| ||||||||||||||||| ||||||||||| || || ||| Sbjct: 1380 ccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgtggtg 1321 Query: 391 gcgtcataactcgatgagacaaagcaattatcgagagaaggttcattgactggttcatat 450 || ||||| || | ||||||||| |||||||| ||||| |||||||| || ||||| ||| Sbjct: 1320 gcatcatagctagttgagacaaaacaattatcaagagatggttcattcacaggttcgtat 1261 Query: 451 ctgtcatacatatcaaaaaacaattcatctactggaccaagtagatcaattccaggcttt 510 || ||||| ||||||||||| | ||||||||| ||||||||||||||||||||||| || Sbjct: 1260 ctatcatagatatcaaaaaatagctcatctacttgaccaagtagatcaattccaggc-tt 1202 Query: 511 tagttcagactgtgggttatcagtctccgcttcggcagacacaaacgcaatgaacttccc 570 ||| || |||||||| || ||||| |||||||| | ||| ||||| ||||| |||||||| Sbjct: 1201 tagctcggactgtggattgtcagtttccgcttctgtagatacaaatgcaataaacttccc 1142 Query: 571 ttttggcgcgacattgtgagtgtacgagcaacagaagacatacatgtctgacttgcgccc 630 ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || Sbjct: 1141 ctttggagcgacattgtgtgtgtatgagcaacagaagacatacatgtctgacttgcgtcc 1082 Query: 631 aagttgctttttgtggtaaaataatctgaaccgagtgggaatcatttg 678 |||||| ||| ||||| ||||||||||| || ||||| || ||||||| Sbjct: 1081 aagttg-tttctgtggcaaaataatctggactgagtgagagtcatttg 1035
>dbj|AK073143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023F13, full insert sequence Length = 1904 Score = 341 bits (172), Expect = 2e-90 Identities = 351/408 (86%), Gaps = 2/408 (0%) Strand = Plus / Minus Query: 271 atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtcttt 330 |||||||| ||||| || || ||||||||||| | ||| ||||| |||||||||| |||| Sbjct: 1432 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacagccttt 1373 Query: 331 ccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtg 390 || || |||| ||| ||||| ||||||||||||||||| ||||||||||| || || ||| Sbjct: 1372 ccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgtggtg 1313 Query: 391 gcgtcataactcgatgagacaaagcaattatcgagagaaggttcattgactggttcatat 450 || ||||| || | ||||||||| |||||||| ||||| |||||||| || ||||| ||| Sbjct: 1312 gcatcatagctagttgagacaaaacaattatcaagagatggttcattcacaggttcgtat 1253 Query: 451 ctgtcatacatatcaaaaaacaattcatctactggaccaagtagatcaattccaggcttt 510 || ||||| ||||||||||| | ||||||||| ||||||||||||||||||||||| || Sbjct: 1252 ctatcatagatatcaaaaaatagctcatctacttgaccaagtagatcaattccaggc-tt 1194 Query: 511 tagttcagactgtgggttatcagtctccgcttcggcagacacaaacgcaatgaacttccc 570 ||| || |||||||| || ||||| |||||||| | ||| ||||| ||||| |||||||| Sbjct: 1193 tagctcggactgtggattgtcagtttccgcttctgtagatacaaatgcaataaacttccc 1134 Query: 571 ttttggcgcgacattgtgagtgtacgagcaacagaagacatacatgtctgacttgcgccc 630 ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || Sbjct: 1133 ctttggagcgacattgtgtgtgtatgagcaacagaagacatacatgtctgacttgcgtcc 1074 Query: 631 aagttgctttttgtggtaaaataatctgaaccgagtgggaatcatttg 678 |||||| ||| ||||| ||||||||||| || ||||| || ||||||| Sbjct: 1073 aagttg-tttctgtggcaaaataatctggactgagtgagagtcatttg 1027
>gb|AY103870.1| Zea mays PCO065776 mRNA sequence Length = 1840 Score = 331 bits (167), Expect = 2e-87 Identities = 343/399 (85%), Gaps = 2/399 (0%) Strand = Plus / Minus Query: 280 tcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttccagtaatc 339 ||||| ||||| || |||||||| | ||| |||||||| || ||||||||||| || ||| Sbjct: 1439 tcttcggcagcactagcagcactcaaatccacactaaggtctacagtctttccggtgatc 1380 Query: 340 agtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtggcgtcataa 399 | ||| ||||| || ||||||||||| |||||||||||||| || || ||||| ||||| Sbjct: 1379 attgtatacatgttcagaacatctgttacagttgtctcaaaatgtgtggtggcatcatag 1320 Query: 400 ctcgatgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtcatac 459 || | ||||||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 1319 cttgtcgagacaaagcaattatcaagagatggttcattcactggttcatatctgtcatag 1260 Query: 460 atatcaaaaaacaattcatctactggaccaagtagatcaattccaggcttttagttcaga 519 |||||| | || | |||||||| | |||||||||||||||||||||| ||||| ||||| Sbjct: 1259 atatcatagaaaatctcatctacagaaccaagtagatcaattccaggc-tttagctcaga 1201 Query: 520 ctgtgggttatcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgc 579 ||| || ||||||||||| ||||| ||||||||||| ||||||||||||||| |||| || Sbjct: 1200 ctggggattatcagtctctgcttctgcagacacaaatgcaatgaacttccctcttggtgc 1141 Query: 580 gacattgtgagtgtacgagcaacagaagacatacatgtctgacttgcgcccaagttgctt 639 |||||||| ||||| ||||||||||| |||||||||||||| |||| |||||||| || Sbjct: 1140 aacattgtgcgtgtatgagcaacagaaaacatacatgtctgatctgcgtccaagttg-tt 1082 Query: 640 tttgtggtaaaataatctgaaccgagtgggaatcatttg 678 | || || |||||||| |||||||||||||| ||||||| Sbjct: 1081 tctgaggcaaaataatttgaaccgagtgggactcatttg 1043
>gb|BT017180.1| Zea mays clone EL01N0369D01.c mRNA sequence Length = 1675 Score = 317 bits (160), Expect = 3e-83 Identities = 333/388 (85%), Gaps = 2/388 (0%) Strand = Plus / Minus Query: 280 tcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttccagtaatc 339 ||||| ||||| || |||||||| | ||| |||||||| || ||||||||||| || ||| Sbjct: 1358 tcttcggcagcactagcagcactcaaatccacactaaggtctacagtctttccggtgatc 1299 Query: 340 agtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtggcgtcataa 399 | ||| ||||| || ||||||||||| |||||||||||||| || || ||||| ||||| Sbjct: 1298 attgtatacatgttcagaacatctgttacagttgtctcaaaatgtgtggtggcatcatag 1239 Query: 400 ctcgatgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtcatac 459 || | ||||||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 1238 cttgtcgagacaaagcaattatcaagagatggttcattcactggttcatatctgtcatag 1179 Query: 460 atatcaaaaaacaattcatctactggaccaagtagatcaattccaggcttttagttcaga 519 |||||| | || | |||||||| | |||||||||||||||||||||| ||||| ||||| Sbjct: 1178 atatcatagaaaatctcatctacagaaccaagtagatcaattccaggc-tttagctcaga 1120 Query: 520 ctgtgggttatcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgc 579 ||| || ||||||||||| ||||| ||||||||||| ||||||||||||||| |||| || Sbjct: 1119 ctggggattatcagtctctgcttctgcagacacaaatgcaatgaacttccctcttggtgc 1060 Query: 580 gacattgtgagtgtacgagcaacagaagacatacatgtctgacttgcgcccaagttgctt 639 |||||||| ||||| ||||||||||| |||||||||||||| |||| ||||||||| | Sbjct: 1059 aacattgtgcgtgtatgagcaacagaaaacatacatgtctgatctgcgtccaagttgc-t 1001 Query: 640 tttgtggtaaaataatctgaaccgagtg 667 | || || |||||||| ||||||||||| Sbjct: 1000 tctgaggcaaaataatttgaaccgagtg 973
>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02, complete sequence Length = 138677 Score = 192 bits (97), Expect = 1e-45 Identities = 182/209 (87%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 405 tgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtcatacatatc 464 ||||||||| |||||||| ||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct: 15658 tgagacaaaacaattatcaagagatggttcattcacaggttcgtatctatcatagatatc 15599 Query: 465 aaaaaacaattcatctactggaccaagtagatcaattccaggcttttagttcagactgtg 524 |||||| | ||||||||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 15598 aaaaaatagctcatctacttgaccaagtagatcaattccaggc-tttagctcggactgtg 15540 Query: 525 ggttatcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacat 584 | || ||||| |||||||| | ||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 15539 gattgtcagtttccgcttctgtagatacaaatgcaataaacttcccctttggagcgacat 15480 Query: 585 tgtgagtgtacgagcaacagaagacatac 613 |||| ||||| |||||||||||||||||| Sbjct: 15479 tgtgtgtgtatgagcaacagaagacatac 15451 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 327 ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 386 |||||| || |||| ||| ||||| ||||||||||||||||| ||||||||||| || || Sbjct: 15823 ctttccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgt 15764 Query: 387 agtggcgtcata 398 ||||| ||||| Sbjct: 15763 ggtggcatcata 15752 Score = 61.9 bits (31), Expect = 3e-06 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 612 acatgtctgacttgcgcccaagttgctttttgtggtaaaataatctgaaccgagtgggaa 671 |||||||||||||||| |||||||| ||| ||||| ||||||||||| || ||||| || Sbjct: 15324 acatgtctgacttgcgtccaagttg-tttctgtggcaaaataatctggactgagtgagag 15266 Query: 672 tcatttg 678 ||||||| Sbjct: 15265 tcatttg 15259 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 271 atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacag 325 |||||||| ||||| || || ||||||||||| | ||| ||||| |||||||||| Sbjct: 16140 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacag 16086
>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01, complete sequence Length = 140322 Score = 192 bits (97), Expect = 1e-45 Identities = 182/209 (87%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 405 tgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtcatacatatc 464 ||||||||| |||||||| ||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct: 42431 tgagacaaaacaattatcaagagatggttcattcacaggttcgtatctatcatagatatc 42372 Query: 465 aaaaaacaattcatctactggaccaagtagatcaattccaggcttttagttcagactgtg 524 |||||| | ||||||||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 42371 aaaaaatagctcatctacttgaccaagtagatcaattccaggc-tttagctcggactgtg 42313 Query: 525 ggttatcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacat 584 | || ||||| |||||||| | ||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 42312 gattgtcagtttccgcttctgtagatacaaatgcaataaacttcccctttggagcgacat 42253 Query: 585 tgtgagtgtacgagcaacagaagacatac 613 |||| ||||| |||||||||||||||||| Sbjct: 42252 tgtgtgtgtatgagcaacagaagacatac 42224 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 327 ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 386 |||||| || |||| ||| ||||| ||||||||||||||||| ||||||||||| || || Sbjct: 42596 ctttccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgt 42537 Query: 387 agtggcgtcata 398 ||||| ||||| Sbjct: 42536 ggtggcatcata 42525 Score = 61.9 bits (31), Expect = 3e-06 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 612 acatgtctgacttgcgcccaagttgctttttgtggtaaaataatctgaaccgagtgggaa 671 |||||||||||||||| |||||||| ||| ||||| ||||||||||| || ||||| || Sbjct: 42097 acatgtctgacttgcgtccaagttg-tttctgtggcaaaataatctggactgagtgagag 42039 Query: 672 tcatttg 678 ||||||| Sbjct: 42038 tcatttg 42032 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 271 atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacag 325 |||||||| ||||| || || ||||||||||| | ||| ||||| |||||||||| Sbjct: 42913 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacag 42859
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 192 bits (97), Expect = 1e-45 Identities = 182/209 (87%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 405 tgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtcatacatatc 464 ||||||||| |||||||| ||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct: 13586523 tgagacaaaacaattatcaagagatggttcattcacaggttcgtatctatcatagatatc 13586464 Query: 465 aaaaaacaattcatctactggaccaagtagatcaattccaggcttttagttcagactgtg 524 |||||| | ||||||||| ||||||||||||||||||||||| ||||| || ||||||| Sbjct: 13586463 aaaaaatagctcatctacttgaccaagtagatcaattccaggc-tttagctcggactgtg 13586405 Query: 525 ggttatcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacat 584 | || ||||| |||||||| | ||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 13586404 gattgtcagtttccgcttctgtagatacaaatgcaataaacttcccctttggagcgacat 13586345 Query: 585 tgtgagtgtacgagcaacagaagacatac 613 |||| ||||| |||||||||||||||||| Sbjct: 13586344 tgtgtgtgtatgagcaacagaagacatac 13586316 Score = 168 bits (85), Expect = 2e-38 Identities = 179/209 (85%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 405 tgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtcatacatatc 464 ||||||||| || ||||| ||||| || ||||| || ||||||||||| ||||| ||||| Sbjct: 20338524 tgagacaaaacagttatcaagagatggctcattcacgggttcatatctatcatagatatc 20338465 Query: 465 aaaaaacaattcatctactggaccaagtagatcaattccaggcttttagttcagactgtg 524 ||| || | ||||||||| |||||||||||||||| ||||||||| || ||||||| || Sbjct: 20338464 aaagaatagctcatctacttgaccaagtagatcaatcccaggcttt-agctcagactctg 20338406 Query: 525 ggttatcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacat 584 | | |||||||| ||||| | ||||||||| |||||||||||||||||||| || |||| Sbjct: 20338405 gatggtcagtctctgcttctgtagacacaaatgcaatgaacttcccttttggagcaacat 20338346 Query: 585 tgtgagtgtacgagcaacagaagacatac 613 |||| ||||| ||||||| |||||||||| Sbjct: 20338345 tgtgtgtgtatgagcaaccgaagacatac 20338317 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 327 ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 386 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| || || Sbjct: 20338699 ctttccagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgt 20338640 Query: 387 agtggcgtcata 398 ||||| ||||| Sbjct: 20338639 ggtggcatcata 20338628 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 272 tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtct 328 ||||||| ||||| ||||| ||||||||||| | ||||||||| ||||||||||||| Sbjct: 20339044 tctaatattcttcagcagcactggcagcactcaaatcgacactgagatcaacagtct 20338988 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 327 ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 386 |||||| || |||| ||| ||||| ||||||||||||||||| ||||||||||| || || Sbjct: 13586688 ctttccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgt 13586629 Query: 387 agtggcgtcata 398 ||||| ||||| Sbjct: 13586628 ggtggcatcata 13586617 Score = 61.9 bits (31), Expect = 3e-06 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 612 acatgtctgacttgcgcccaagttgctttttgtggtaaaataatctgaaccgagtgggaa 671 |||||||||||||||| |||||||| ||| ||||| ||||||||||| || ||||| || Sbjct: 20338196 acatgtctgacttgcgtccaagttg-tttctgtggcaaaataatctggactgagtgcgag 20338138 Query: 672 tcatttg 678 ||||||| Sbjct: 20338137 tcatttg 20338131 Score = 61.9 bits (31), Expect = 3e-06 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 612 acatgtctgacttgcgcccaagttgctttttgtggtaaaataatctgaaccgagtgggaa 671 |||||||||||||||| |||||||| ||| ||||| ||||||||||| || ||||| || Sbjct: 13586189 acatgtctgacttgcgtccaagttg-tttctgtggcaaaataatctggactgagtgagag 13586131 Query: 672 tcatttg 678 ||||||| Sbjct: 13586130 tcatttg 13586124 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 271 atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacag 325 |||||||| ||||| || || ||||||||||| | ||| ||||| |||||||||| Sbjct: 13587005 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacag 13586951
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 168 bits (85), Expect = 2e-38 Identities = 179/209 (85%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 405 tgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtcatacatatc 464 ||||||||| || ||||| ||||| || ||||| || ||||||||||| ||||| ||||| Sbjct: 10269 tgagacaaaacagttatcaagagatggctcattcacgggttcatatctatcatagatatc 10210 Query: 465 aaaaaacaattcatctactggaccaagtagatcaattccaggcttttagttcagactgtg 524 ||| || | ||||||||| |||||||||||||||| ||||||||| || ||||||| || Sbjct: 10209 aaagaatagctcatctacttgaccaagtagatcaatcccaggcttt-agctcagactctg 10151 Query: 525 ggttatcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacat 584 | | |||||||| ||||| | ||||||||| |||||||||||||||||||| || |||| Sbjct: 10150 gatggtcagtctctgcttctgtagacacaaatgcaatgaacttcccttttggagcaacat 10091 Query: 585 tgtgagtgtacgagcaacagaagacatac 613 |||| ||||| ||||||| |||||||||| Sbjct: 10090 tgtgtgtgtatgagcaaccgaagacatac 10062 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 327 ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 386 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| || || Sbjct: 10444 ctttccagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgt 10385 Query: 387 agtggcgtcata 398 ||||| ||||| Sbjct: 10384 ggtggcatcata 10373 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 272 tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtct 328 ||||||| ||||| ||||| ||||||||||| | ||||||||| ||||||||||||| Sbjct: 10789 tctaatattcttcagcagcactggcagcactcaaatcgacactgagatcaacagtct 10733 Score = 61.9 bits (31), Expect = 3e-06 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 612 acatgtctgacttgcgcccaagttgctttttgtggtaaaataatctgaaccgagtgggaa 671 |||||||||||||||| |||||||| ||| ||||| ||||||||||| || ||||| || Sbjct: 9941 acatgtctgacttgcgtccaagttg-tttctgtggcaaaataatctggactgagtgcgag 9883 Query: 672 tcatttg 678 ||||||| Sbjct: 9882 tcatttg 9876
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05, complete sequence Length = 107407 Score = 168 bits (85), Expect = 2e-38 Identities = 179/209 (85%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 405 tgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtcatacatatc 464 ||||||||| || ||||| ||||| || ||||| || ||||||||||| ||||| ||||| Sbjct: 72114 tgagacaaaacagttatcaagagatggctcattcacgggttcatatctatcatagatatc 72055 Query: 465 aaaaaacaattcatctactggaccaagtagatcaattccaggcttttagttcagactgtg 524 ||| || | ||||||||| |||||||||||||||| ||||||||| || ||||||| || Sbjct: 72054 aaagaatagctcatctacttgaccaagtagatcaatcccaggcttt-agctcagactctg 71996 Query: 525 ggttatcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacat 584 | | |||||||| ||||| | ||||||||| |||||||||||||||||||| || |||| Sbjct: 71995 gatggtcagtctctgcttctgtagacacaaatgcaatgaacttcccttttggagcaacat 71936 Query: 585 tgtgagtgtacgagcaacagaagacatac 613 |||| ||||| ||||||| |||||||||| Sbjct: 71935 tgtgtgtgtatgagcaaccgaagacatac 71907 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 327 ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 386 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| || || Sbjct: 72289 ctttccagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgt 72230 Query: 387 agtggcgtcata 398 ||||| ||||| Sbjct: 72229 ggtggcatcata 72218 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 272 tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtct 328 ||||||| ||||| ||||| ||||||||||| | ||||||||| ||||||||||||| Sbjct: 72634 tctaatattcttcagcagcactggcagcactcaaatcgacactgagatcaacagtct 72578 Score = 61.9 bits (31), Expect = 3e-06 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 612 acatgtctgacttgcgcccaagttgctttttgtggtaaaataatctgaaccgagtgggaa 671 |||||||||||||||| |||||||| ||| ||||| ||||||||||| || ||||| || Sbjct: 71786 acatgtctgacttgcgtccaagttg-tttctgtggcaaaataatctggactgagtgcgag 71728 Query: 672 tcatttg 678 ||||||| Sbjct: 71727 tcatttg 71721
>ref|XM_477386.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1795 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 548 gacacaaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaag 607 ||||| ||||| |||||||||||||||| || |||||||||| ||| || |||||||| Sbjct: 1193 gacacgaacgcgatgaacttcccttttgatgcaacattgtgagagtaggaacaacagaaa 1134 Query: 608 acatacatgtctgacttgcgcccaagttgctttt 641 |||||||||||||| ||||| ||||||||||||| Sbjct: 1133 acatacatgtctgatttgcgtccaagttgctttt 1100
>dbj|AK069636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025M21, full insert sequence Length = 1795 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 548 gacacaaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaag 607 ||||| ||||| |||||||||||||||| || |||||||||| ||| || |||||||| Sbjct: 1193 gacacgaacgcgatgaacttcccttttgatgcaacattgtgagagtaggaacaacagaaa 1134 Query: 608 acatacatgtctgacttgcgcccaagttgctttt 641 |||||||||||||| ||||| ||||||||||||| Sbjct: 1133 acatacatgtctgatttgcgtccaagttgctttt 1100
>emb|AJ005836.1|CAR5836 Cicer arietinum mRNA for GDP dissociation inhibitor (gdi) Length = 1906 Score = 91.7 bits (46), Expect = 3e-15 Identities = 157/194 (80%) Strand = Plus / Minus Query: 277 tactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttccagta 336 ||||||||||| |||| ||| ||||| ||||| ||||| || |||| | |||||| || Sbjct: 1492 tactcttctgcggcgccggcggcactaagatccacactgaggtcaagaacctttccggtt 1433 Query: 337 atcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtggcgtca 396 |||| ||| ||||| || ||||| || ||||||| |||||||||||| || || ||| Sbjct: 1432 atcaatgtatacatgttgagaacgtccagtacagttgactcaaagtgagtggtagcatca 1373 Query: 397 taactcgatgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtca 456 || || | ||| |||||||| || || || | |||||||||||||||||| |||| ||| Sbjct: 1372 tagcttgttgatacaaagcagttgtccagggtgggttcattgactggttcaaatctatca 1313 Query: 457 tacatatcaaaaaa 470 |||||||||||||| Sbjct: 1312 tacatatcaaaaaa 1299 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 551 acaaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaagaca 610 ||||| ||||| || || || ||||| || |||||||||| |||||||||||||| | Sbjct: 1219 acaaatgcaataaattttccctttggagcaacattgtgagaatacgagcaacagaatagg 1160 Query: 611 tacatgtctgacttgcg 627 ||||||||||||||||| Sbjct: 1159 tacatgtctgacttgcg 1143
>gb|AY346010.1| Hordeum vulgare GDP dissociation inhibitor protein (GDI1) mRNA, complete cds Length = 1565 Score = 79.8 bits (40), Expect = 1e-11 Identities = 161/200 (80%), Gaps = 1/200 (0%) Strand = Plus / Minus Query: 442 ggttcatatctgtcatacatatcaaaaaacaattcatctactggaccaagtagatcaatt 501 ||||||||||||||||| | || ||||| || ||||| || || || || ||||| ||| Sbjct: 1180 ggttcatatctgtcatatgtgtcgaaaaataactcatcaacaggccctagaagatcgatt 1121 Query: 502 ccaggcttttagttcagactgtgggttatcagtctccgcttcggcagacacaaacgcaat 561 || ||||| ||||| | || ||| || ||| |||| |||| || ||||||||||| || Sbjct: 1120 cctggcttc-agttctgcctctggattgtcactctctgcttgtgctgacacaaacgctat 1062 Query: 562 gaacttcccttttggcgcgacattgtgagtgtacgagcaacagaagacatacatgtctga 621 |||||| || || | ||| |||||||||| ||| || || ||||| |||||||||||||| Sbjct: 1061 gaactttcccttcgacgcaacattgtgagagtaggaacagcagaaaacatacatgtctga 1002 Query: 622 cttgcgcccaagttgctttt 641 |||| ||||||||||||| Sbjct: 1001 tctgcggccaagttgctttt 982
>ref|NM_115855.2| Arabidopsis thaliana ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2); RAB GDP-dissociation inhibitor AT3G59920 (ATGDI2) mRNA, complete cds Length = 1683 Score = 69.9 bits (35), Expect = 1e-08 Identities = 102/123 (82%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 493 agatcaattccaggcttttagttcagactgtgggttatcagtctccgcttcggcagacac 552 |||||| ||||||||||| ||||| | || |||||||||||||| || || | |||||| Sbjct: 1235 agatcagttccaggcttt-agttcggtttgagggttatcagtctctgcatctgtagacac 1177 Query: 553 aaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaagacata 612 ||| |||||||| || || || || || || ||||| | |||||| |||||||||||||| Sbjct: 1176 aaatgcaatgaattttcccttgggagcaacgttgtgggagtacgaacaacagaagacata 1117 Query: 613 cat 615 ||| Sbjct: 1116 cat 1114
>gb|BT000011.1| Arabidopsis thaliana Rab GDP dissociation inhibitor (At3g59920) mRNA, complete cds Length = 1523 Score = 69.9 bits (35), Expect = 1e-08 Identities = 102/123 (82%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 493 agatcaattccaggcttttagttcagactgtgggttatcagtctccgcttcggcagacac 552 |||||| ||||||||||| ||||| | || |||||||||||||| || || | |||||| Sbjct: 1118 agatcagttccaggcttt-agttcggtttgagggttatcagtctctgcatctgtagacac 1060 Query: 553 aaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaagacata 612 ||| |||||||| || || || || || || ||||| | |||||| |||||||||||||| Sbjct: 1059 aaatgcaatgaattttcccttgggagcaacgttgtgggagtacgaacaacagaagacata 1000 Query: 613 cat 615 ||| Sbjct: 999 cat 997
>emb|AJ001397.1|ATRABGDI2 Arabidopsis thaliana mRNA for rab GDP dissociation inhibitor, isoform 2 Length = 1684 Score = 69.9 bits (35), Expect = 1e-08 Identities = 102/123 (82%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 493 agatcaattccaggcttttagttcagactgtgggttatcagtctccgcttcggcagacac 552 |||||| ||||||||||| ||||| | || |||||||||||||| || || | |||||| Sbjct: 1226 agatcagttccaggcttt-agttcggtttgagggttatcagtctctgcatctgtagacac 1168 Query: 553 aaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaagacata 612 ||| |||||||| || || || || || || ||||| | |||||| |||||||||||||| Sbjct: 1167 aaatgcaatgaattttcccttgggagcaacgttgtgggagtacgaacaacagaagacata 1108 Query: 613 cat 615 ||| Sbjct: 1107 cat 1105
>gb|AY081269.1| Arabidopsis thaliana Rab GDP dissociation inhibitor (At3g59920) mRNA, complete cds Length = 1672 Score = 69.9 bits (35), Expect = 1e-08 Identities = 102/123 (82%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 493 agatcaattccaggcttttagttcagactgtgggttatcagtctccgcttcggcagacac 552 |||||| ||||||||||| ||||| | || |||||||||||||| || || | |||||| Sbjct: 1237 agatcagttccaggcttt-agttcggtttgagggttatcagtctctgcatctgtagacac 1179 Query: 553 aaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaagacata 612 ||| |||||||| || || || || || || ||||| | |||||| |||||||||||||| Sbjct: 1178 aaatgcaatgaattttcccttgggagcaacgttgtgggagtacgaacaacagaagacata 1119 Query: 613 cat 615 ||| Sbjct: 1118 cat 1116
>dbj|AB005560.1| Arabidopsis thaliana mRNA for AtGDI2, complete cds Length = 1586 Score = 69.9 bits (35), Expect = 1e-08 Identities = 102/123 (82%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 493 agatcaattccaggcttttagttcagactgtgggttatcagtctccgcttcggcagacac 552 |||||| ||||||||||| ||||| | || |||||||||||||| || || | |||||| Sbjct: 1151 agatcagttccaggcttt-agttcggtttgagggttatcagtctctgcatctgtagacac 1093 Query: 553 aaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaagacata 612 ||| |||||||| || || || || || || ||||| | |||||| |||||||||||||| Sbjct: 1092 aaatgcaatgaattttcccttgggagcaacgttgtgggagtacgaacaacagaagacata 1033 Query: 613 cat 615 ||| Sbjct: 1032 cat 1030
>emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F24G16 Length = 100906 Score = 67.9 bits (34), Expect = 4e-08 Identities = 104/126 (82%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 493 agatcaattccaggcttttagttcagactgtgggttatcagtctccgcttcggcagacac 552 |||||| ||||||||||| ||||| | || |||||||||||||| || || | |||||| Sbjct: 70642 agatcagttccaggcttt-agttcggtttgagggttatcagtctctgcatctgtagacac 70584 Query: 553 aaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaagacata 612 ||| |||||||| || || || || || || ||||| | |||||| |||||||||||||| Sbjct: 70583 aaatgcaatgaattttcccttgggagcaacgttgtgggagtacgaacaacagaagacata 70524 Query: 613 catgtc 618 | |||| Sbjct: 70523 cctgtc 70518
>emb|BX830219.1|CNS09ZXO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1370 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 530 tcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacattgtga 589 |||||||| ||||| ||||| ||||| || ||| | || || ||||| || ||||||||| Sbjct: 850 tcagtctcagcttctgcagagacaaaagctatgtatttgccctttggtgccacattgtga 791 Query: 590 gtgtacgagcaacagaagacatacatgtctgacttgcgcccaagttgctt 639 | ||| ||||||||||| | ||||||||||| ||||| || |||||||| Sbjct: 790 gcgtatgagcaacagaacaagtacatgtctgatttgcgaccgagttgctt 741
>gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete sequence Length = 97390 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 430 ggttcattgactggttcatatctgtcatacatatcaaaaaacaattcatctactggacca 489 |||||||||||||||||| |||| ||||||||||||||||| | ||||| || || || Sbjct: 74525 ggttcattgactggttcaaatctatcatacatatcaaaaaatatctcatcaacaggtcct 74466 Query: 490 agtagatcaattccagg 506 || || ||||||||||| Sbjct: 74465 agaaggtcaattccagg 74449 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 277 tactcttctgcagcgctggcagcactgagatc 308 |||||||||||||| ||||| ||||||||||| Sbjct: 75316 tactcttctgcagcactggcggcactgagatc 75285
>emb|AJ618983.1| Medicago truncatula gdi gene for GDP dissociation inhibitor Length = 1685 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 430 ggttcattgactggttcatatctgtcatacatatcaaaaaacaattcatctactggacca 489 |||||||||||||||||| |||| ||||||||||||||||| | ||||| || || || Sbjct: 1285 ggttcattgactggttcaaatctatcatacatatcaaaaaatatctcatcaacaggtcct 1226 Query: 490 agtagatcaattccagg 506 || || ||||||||||| Sbjct: 1225 agaaggtcaattccagg 1209 Score = 60.0 bits (30), Expect = 1e-05 Identities = 153/194 (78%) Strand = Plus / Minus Query: 277 tactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttccagta 336 |||||||||||||| ||||| |||||||||| ||| | || || | | ||||||||| Sbjct: 1438 tactcttctgcagcactggcgacactgagatccacagtgaggtctagaacctttccagtt 1379 Query: 337 atcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtggcgtca 396 |||| || ||||| || || ||||| || |||| ||||||||||| || || ||| Sbjct: 1378 atcaacgtatacatgttgaggacatccagtacggttgattcaaagtgagtggtagcatca 1319 Query: 397 taactcgatgagacaaagcaattatcgagagaaggttcattgactggttcatatctgtca 456 ||||| | || | |||||| || || || | |||||||||||||||||| |||| ||| Sbjct: 1318 taacttgtcgaaataaagcagttgtctagggtgggttcattgactggttcaaatctatca 1259 Query: 457 tacatatcaaaaaa 470 |||||||||||||| Sbjct: 1258 tacatatcaaaaaa 1245 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 581 acattgtgagtgtacgagcaacagaagacatacatgtctgacttgcgcccaagttgcttt 640 |||||||||| |||||||||||||| | |||||||||||||| || || ||||||||| Sbjct: 1135 acattgtgagaatacgagcaacagaataagtacatgtctgactttcggcccagttgcttt 1076 Query: 641 t 641 | Sbjct: 1075 t 1075
>dbj|AK100522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100O09, full insert sequence Length = 1621 Score = 61.9 bits (31), Expect = 3e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 530 tcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacattgtga 589 |||| ||| ||||| | ||| ||||| || |||||||| |||||||| || || |||||| Sbjct: 1198 tcagcctctgcttccgtagaaacaaaggcgatgaacttgccttttggtgcaacgttgtga 1139 Query: 590 gtgtacgagcaacagaagacatacatgtctgacttgcgc 628 | || ||||||||||| || ||||||||||| |||||| Sbjct: 1138 gcatatgagcaacagaacacgtacatgtctgatttgcgc 1100
>ref|NM_120992.3| Arabidopsis thaliana RAB GDP-dissociation inhibitor AT5G09550 mRNA, complete cds Length = 1368 Score = 60.0 bits (30), Expect = 1e-05 Identities = 90/110 (81%) Strand = Plus / Minus Query: 530 tcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacattgtga 589 ||||| || ||||| ||||| ||||| || ||| | || || ||||| || ||||||||| Sbjct: 850 tcagtttcagcttctgcagagacaaaagctatgtatttgccctttggtgccacattgtga 791 Query: 590 gtgtacgagcaacagaagacatacatgtctgacttgcgcccaagttgctt 639 | ||| ||||||||||| | ||||||||||| ||||| || |||||||| Sbjct: 790 gcgtatgagcaacagaacaagtacatgtctgatttgcgaccgagttgctt 741
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 548 gacacaaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaag 607 ||||| ||||| |||||||||||||||| || |||||||||| ||| || |||||||| Sbjct: 10016019 gacacgaacgcgatgaacttcccttttgatgcaacattgtgagagtaggaacaacagaaa 10016078 Query: 608 acatac 613 |||||| Sbjct: 10016079 acatac 10016084 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 613 catgtctgacttgcgcccaagttgctttt 641 ||||||||| ||||| ||||||||||||| Sbjct: 10016207 catgtctgatttgcgtccaagttgctttt 10016235
>dbj|AP003797.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1001_C01 Length = 90750 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 548 gacacaaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaag 607 ||||| ||||| |||||||||||||||| || |||||||||| ||| || |||||||| Sbjct: 47668 gacacgaacgcgatgaacttcccttttgatgcaacattgtgagagtaggaacaacagaaa 47727 Query: 608 acatac 613 |||||| Sbjct: 47728 acatac 47733 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 613 catgtctgacttgcgcccaagttgctttt 641 ||||||||| ||||| ||||||||||||| Sbjct: 47856 catgtctgatttgcgtccaagttgctttt 47884
>gb|AY111853.1| Zea mays CL4750_1 mRNA sequence Length = 515 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 527 ttatcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacattg 586 ||||||| |||||||| || ||||| || || ||||| || ||||||| |||||||| Sbjct: 410 ttatcaggctccgcttgtgctgacacgaatgcgatgaatttgccttttgatgcgacatta 469 Query: 587 tgagtgtacgagcaacagaagacatacatgtctga 621 |||| ||| || || ||||| |||||||||||||| Sbjct: 470 tgagagtaggaacagcagaaaacatacatgtctga 504
>emb|AJ401079.2|LES401079 Lycopersicon esculentum partial mRNA for GDP dissociation inhibitor (GDI1 gene) Length = 1619 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 569 ccttttggcgcgacattgtgagtgtacgagcaacagaagacatacatgtctgacttgcgc 628 |||||||| ||||||||||| | ||| || |||||||| | ||||||||||| ||||| Sbjct: 1023 ccttttggagcgacattgtgggagtaggaacaacagaacaggtacatgtctgatttgcga 964 Query: 629 ccaagttgctt 639 || |||||||| Sbjct: 963 ccgagttgctt 953
>emb|BX842149.1|CNS09YB7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS82ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1535 Score = 52.0 bits (26), Expect = 0.002 Identities = 132/166 (79%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 450 tctgtcatacatatcaaaaaacaattcatctactggaccaagtagatcaattccaggctt 509 |||||||||||| || || || | ||||| || ||||| || ||| |||||||| |||| Sbjct: 1206 tctgtcatacatgtcgaagaatatctcatcaacaggacccaggagaacaattccaagctt 1147 Query: 510 ttagttcagactgtgggttatcagtctccgcttcggcagacacaaacgcaatgaacttcc 569 | ||||| | || ||||||| |||||| || || | ||||||||| || ||||| || | Sbjct: 1146 t-agttcggtttgagggttatgagtctctgcgtctgtagacacaaatgcgatgaattttc 1088 Query: 570 cttttggcgcgacattgtgagtgtacgagcaacagaagacatacat 615 | || || ||||| ||||| | |||||| | ||||||||||||||| Sbjct: 1087 ccttgggagcgacgttgtgggagtacgaacgacagaagacatacat 1042
>ref|NM_129973.1| Arabidopsis thaliana ATGDI1 AT2G44100 (ATGDI1) mRNA, complete cds Length = 1697 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 599 caacagaagacatacatgtctgacttgcg 627 ||||||||||||||||||||||| ||||| Sbjct: 1125 caacagaagacatacatgtctgatttgcg 1097
>emb|Y07961.1|ATRABGDI A.thaliana mRNA for GDP dissociation inhibitor Length = 1399 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 599 caacagaagacatacatgtctgacttgcg 627 ||||||||||||||||||||||| ||||| Sbjct: 1055 caacagaagacatacatgtctgatttgcg 1027
>gb|AY113036.1| Arabidopsis thaliana At2g44100/F6E13.23 mRNA, complete cds Length = 1338 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 599 caacagaagacatacatgtctgacttgcg 627 ||||||||||||||||||||||| ||||| Sbjct: 1013 caacagaagacatacatgtctgatttgcg 985
>gb|AF361801.1| Arabidopsis thaliana At2g44100/F6E13.23 mRNA, complete cds Length = 1660 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 599 caacagaagacatacatgtctgacttgcg 627 ||||||||||||||||||||||| ||||| Sbjct: 1115 caacagaagacatacatgtctgatttgcg 1087
>gb|AY065087.1| Arabidopsis thaliana GDP dissociation inhibitor (At2g44100; F6E13.23) mRNA, complete cds Length = 1625 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 599 caacagaagacatacatgtctgacttgcg 627 ||||||||||||||||||||||| ||||| Sbjct: 1127 caacagaagacatacatgtctgatttgcg 1099
>gb|AY050418.1| Arabidopsis thaliana At2g44100/F6E13.23 mRNA, complete cds Length = 2728 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 599 caacagaagacatacatgtctgacttgcg 627 ||||||||||||||||||||||| ||||| Sbjct: 1116 caacagaagacatacatgtctgatttgcg 1088
>dbj|D83531.1| Arabidopsis thaliana mRNA for GDP dissociation inhibitor, complete cds Length = 1590 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 599 caacagaagacatacatgtctgacttgcg 627 ||||||||||||||||||||||| ||||| Sbjct: 1116 caacagaagacatacatgtctgatttgcg 1088
>gb|AY086920.1| Arabidopsis thaliana clone 29536 mRNA, complete sequence Length = 1697 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Minus Query: 600 aacagaagacatacatgtctgacttgcg 627 |||||||||||||||||||||| ||||| Sbjct: 1124 aacagaagacatacatgtctgatttgcg 1097
>gb|U62866.1|VCU62866 Volvox carteri f. nagariensis GDP dissociation inhibitor protein GDIV1p (gdiV1) mRNA, complete cds Length = 2529 Score = 48.1 bits (24), Expect = 0.038 Identities = 33/36 (91%) Strand = Plus / Minus Query: 592 gtacgagcaacagaagacatacatgtctgacttgcg 627 |||||||||||||||||| |||||||| || ||||| Sbjct: 1096 gtacgagcaacagaagacgtacatgtcggatttgcg 1061 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 373 gtctcaaagtgagtagtggcgtcata 398 |||||||||||||| ||||||||||| Sbjct: 1314 gtctcaaagtgagtggtggcgtcata 1289
>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete sequence Length = 220671 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 46 ttgttagtacagaataatgttta 68 ||||||||||||||||||||||| Sbjct: 218269 ttgttagtacagaataatgttta 218247
>gb|DQ241841.1| Solanum tuberosum clone 181H08 GDP dissociation inhibitor 1-like mRNA, complete cds Length = 1651 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 638 tttttgtggtaaaataatctgaaccgagtgggaatcatt 676 |||||| ||||||||||| || |||||||| |||||||| Sbjct: 1052 tttttggggtaaaataatttgcaccgagtgtgaatcatt 1014
>gb|AC161886.4| Pan troglodytes BAC clone CH251-708N9 from chromosome 7, complete sequence Length = 205419 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 ttagtacagaataatgtttacaacccagt 77 ||||| ||||||||||||||||| ||||| Sbjct: 95449 ttagtgcagaataatgtttacaatccagt 95477
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 530 tcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacattgtga 589 |||| ||| ||||| | ||| ||||| || |||||||| |||||||| || || |||||| Sbjct: 9364940 tcagcctctgcttccgtagaaacaaaggcgatgaacttgccttttggtgcaacgttgtga 9364999 Query: 590 gtgtacgagcaacagaa 606 | || ||||||||||| Sbjct: 9365000 gcatatgagcaacagaa 9365016
>gb|AC002541.1| Homo sapiens BAC clone CTB-43K6 from 7, complete sequence Length = 166983 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 ttagtacagaataatgtttacaacccagt 77 ||||| ||||||||||||||||| ||||| Sbjct: 123074 ttagtgcagaataatgtttacaatccagt 123102
>emb|CR936845.11| Mouse DNA sequence from clone DN-279H6 on chromosome 11, complete sequence Length = 101662 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 aagaaaatactgggtttgatg 268 ||||||||||||||||||||| Sbjct: 8059 aagaaaatactgggtttgatg 8039
>emb|AL356415.26| Human DNA sequence from clone RP3-337D23 on chromosome 6q23.3-25.3 Contains the 5' end of tomosyn (LOC134957) (contains FLJ30922), part of a putative novel gene, a putative novel gene and a CpG island, complete sequence Length = 140999 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 atattaagaacatctgtcaca 369 ||||||||||||||||||||| Sbjct: 38863 atattaagaacatctgtcaca 38883
>emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chromosome 11 Contains the Rabep1 gene for rabaptin, RAB GTPase binding effector protein 1, a ribosomal protein 23a (Rpl23a) pseudogene, a ribosomal protein 23A (Rpl23a) pseudogene, the Nup88 gene for nucleoporin 88, four novel genes, the C1qbp gene for complement component 1 q subcomponent binding protein, the Dhx33 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 33, a novel pseudogene, a CARD domain pseudogene and six CpG islands, complete sequence Length = 254116 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 aagaaaatactgggtttgatg 268 ||||||||||||||||||||| Sbjct: 20777 aagaaaatactgggtttgatg 20757
>ref|NM_205004.1| Gallus gallus GDP dissociation inhibitor 2 (GDI2), mRNA Length = 2286 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 370 gttgtctcaaagtgagtagtggcgtcata 398 ||||||||||||||||| || |||||||| Sbjct: 1348 gttgtctcaaagtgagtggtagcgtcata 1320
>dbj|AK122841.1| Homo sapiens cDNA FLJ16452 fis, clone BRAWH3002467, highly similar to RAB GDP DISSOCIATION INHIBITOR BETA Length = 3587 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 370 gttgtctcaaagtgagtagtggcgtcata 398 ||||||||||| ||||||||||| ||||| Sbjct: 2702 gttgtctcaaaatgagtagtggcatcata 2674
>dbj|AK137828.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130022G01 product:unclassifiable, full insert sequence Length = 2988 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 aagaaaatactgggtttgatg 268 ||||||||||||||||||||| Sbjct: 2661 aagaaaatactgggtttgatg 2641
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 42.1 bits (21), Expect = 2.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 530 tcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacattgtga 589 |||| ||| ||||| | ||| ||||| || |||||||| |||||||| || || |||||| Sbjct: 62340 tcagcctctgcttccgtagaaacaaaggcgatgaacttgccttttggtgcaacgttgtga 62399 Query: 590 gtgtacgagcaacagaa 606 | || ||||||||||| Sbjct: 62400 gcatatgagcaacagaa 62416
>ref|XM_693284.1| PREDICTED: Danio rerio similar to Rgma (LOC569870), mRNA Length = 4031 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 353 taagaacatctgtcacagttgtctc 377 |||||||||||||||||| |||||| Sbjct: 3255 taagaacatctgtcacagctgtctc 3279
>ref|XM_702739.1| PREDICTED: Danio rerio similar to Rgma, transcript variant 2 (LOC563184), mRNA Length = 4031 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 353 taagaacatctgtcacagttgtctc 377 |||||||||||||||||| |||||| Sbjct: 3255 taagaacatctgtcacagctgtctc 3279
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 530 tcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacattgtga 589 |||| ||| ||||| | ||| ||||| || |||||||| |||||||| || || |||||| Sbjct: 9363061 tcagcctctgcttccgtagaaacaaaggcgatgaacttgccttttggtgcaacgttgtga 9363120 Query: 590 gtgtacgagcaacagaa 606 | || ||||||||||| Sbjct: 9363121 gcatatgagcaacagaa 9363137
>gb|AC146074.4| Pan troglodytes BAC clone RP43-15D8 from chromosome 7, complete sequence Length = 196799 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 ttagtacagaataatgtttacaacccagt 77 ||||| ||||||||||||||||| ||||| Sbjct: 88602 ttagtgcagaataatgtttacaatccagt 88630
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 tcaacagtctttccagtaatc 339 ||||||||||||||||||||| Sbjct: 3029230 tcaacagtctttccagtaatc 3029250
>gb|BC091800.1| Danio rerio RGM domain family, member A, mRNA (cDNA clone MGC:110534 IMAGE:7140541), complete cds Length = 4180 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 353 taagaacatctgtcacagttgtctc 377 |||||||||||||||||| |||||| Sbjct: 3261 taagaacatctgtcacagctgtctc 3285
>gb|AC171018.2| Gallus gallus BAC clone CH261-11F14 from chromosome ul, complete sequence Length = 216886 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 370 gttgtctcaaagtgagtagtggcgtcata 398 ||||||||||||||||| || |||||||| Sbjct: 36017 gttgtctcaaagtgagtggtagcgtcata 35989
>emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 in linkage group 18, complete sequence Length = 211922 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 353 taagaacatctgtcacagttgtctc 377 |||||||||||||||||| |||||| Sbjct: 193409 taagaacatctgtcacagctgtctc 193385
>gb|AF144713.1|AF144713 Homo sapiens Rab GDP dissociation inhibitor beta mRNA, partial cds Length = 1079 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 370 gttgtctcaaagtgagtagtggcgtcata 398 ||||||||||| ||||||||||| ||||| Sbjct: 998 gttgtctcaaaatgagtagtggcatcata 970
>emb|Y13297.1|HSY13297 Homo sapiens gene encoding GDP dissociation inhibitor beta, exon 11 Length = 971 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 370 gttgtctcaaagtgagtagtggcgtcata 398 ||||||||||| ||||||||||| ||||| Sbjct: 87 gttgtctcaaaatgagtagtggcatcata 59
>gb|AF076291.1|AF076291 Gallus gallus Rab-GDP dissociation inhibitor mRNA, complete cds Length = 2286 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 370 gttgtctcaaagtgagtagtggcgtcata 398 ||||||||||||||||| || |||||||| Sbjct: 1348 gttgtctcaaagtgagtggtagcgtcata 1320
>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project) Length = 92491 Score = 42.1 bits (21), Expect = 2.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 530 tcagtctccgcttcggcagacacaaacgcaatgaacttcccttttggcgcgacattgtga 589 ||||| || ||||| ||||| ||||| || ||| | || || ||||| || ||||||||| Sbjct: 82693 tcagtttcagcttctgcagagacaaaagctatgtatttgccctttggtgccacattgtga 82752 Query: 590 gtgtacgagcaacagaa 606 | ||| ||||||||||| Sbjct: 82753 gcgtatgagcaacagaa 82769
>gb|AF012823.1|AF012823 Nicotiana tabacum GDP dissociation inhibitor (GDI) mRNA, complete cds Length = 1632 Score = 42.1 bits (21), Expect = 2.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 551 acaaacgcaatgaacttcccttttggcgcgacattgtgagtgtacgagcaacagaagaca 610 ||||| || ||||| ||||| ||||| || ||||| |||||||| || || ||||| | Sbjct: 1174 acaaatgcgatgaatttcccctttggagcaacattatgagtgtaagaacagcagaacagg 1115 Query: 611 tacatgtctgacttgcg 627 ||||||||||| ||||| Sbjct: 1114 tacatgtctgatttgcg 1098 Score = 40.1 bits (20), Expect = 9.4 Identities = 68/84 (80%) Strand = Plus / Minus Query: 375 ctcaaagtgagtagtggcgtcataactcgatgagacaaagcaattatcgagagaaggttc 434 |||||||||||| ||||| ||||| || | ||| | ||| ||||| || | || || || Sbjct: 1349 ctcaaagtgagttgtggcatcatagctagttgaaataaaacaattgtccaaggagggctc 1290 Query: 435 attgactggttcatatctgtcata 458 |||||| |||||| |||||||||| Sbjct: 1289 attgacaggttcagatctgtcata 1266
>gb|BC094316.1| Mus musculus ankyrin repeat domain 41, mRNA (cDNA clone IMAGE:5718350) Length = 2107 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 31 tcgcgtagtgctgctagcag 12
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 ggcgtggacctgaactcctacaca 174 ||||||||| |||||||||||||| Sbjct: 55411 ggcgtggacatgaactcctacaca 55388
>gb|BT012723.1| Lycopersicon esculentum clone 113650R, mRNA sequence Length = 1598 Score = 40.1 bits (20), Expect = 9.4 Identities = 104/132 (78%) Strand = Plus / Minus Query: 327 ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 386 |||||||||||||| || |||||||| || ||||| ||||| | |||||||||||| Sbjct: 1394 ctttccagtaatcaaggtatacatattgaggacatcatcaacagtcgactcaaagtgagt 1335 Query: 387 agtggcgtcataactcgatgagacaaagcaattatcgagagaaggttcattgactggttc 446 || || ||||| || | || | ||| |||||||| | ||| || |||||||| || || Sbjct: 1334 tgtagcatcatagctagtagaaataaaacaattatctaaagagggctcattgacaggctc 1275 Query: 447 atatctgtcata 458 | |||||||||| Sbjct: 1274 aaatctgtcata 1263
>gb|AC127416.7| Mus musculus BAC clone RP23-457J22 from chromosome 8, complete sequence Length = 206997 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 68679 tcgcgtagtgctgctagcag 68660
>gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, complete sequence Length = 207239 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 aagccattgttagtacagaa 59 |||||||||||||||||||| Sbjct: 147211 aagccattgttagtacagaa 147192
>emb|CT005241.3| Pan troglodytes chromosome X clone PTB-093L20 map Xq28, complete sequence Length = 181643 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 aagaaaatactgggtttgat 267 |||||||||||||||||||| Sbjct: 18926 aagaaaatactgggtttgat 18945
>gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, complete sequence Length = 200841 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ggcgtggacctgaactcctacaca 174 ||||||||| |||||||||||||| Sbjct: 9007 ggcgtggacatgaactcctacaca 9030
>gb|AF548034.1| Trametes sp. I-62 laccase (pox2) mRNA, complete cds Length = 1563 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gcagcgctggcagcactgag 305 |||||||||||||||||||| Sbjct: 1286 gcagcgctggcagcactgag 1305
>gb|AC160547.6| Mus musculus chromosome 8, clone RP23-240F23, complete sequence Length = 170722 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 39087 tcgcgtagtgctgctagcag 39068
>gb|AC144517.7| Medicago truncatula clone mth2-13k17, complete sequence Length = 107710 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Plus Query: 442 ggttcatatctgtcatacatatcaaaaaacaattcatctactggaccaagtagatcaatt 501 |||||| |||||||||| || ||| | || | ||||| ||||| ||||| ||||| ||| Sbjct: 83322 ggttcaaatctgtcatagatgtcatagaatatctcatcgactggtccaaggagatcgatt 83381 Query: 502 ccaggctt 509 |||||||| Sbjct: 83382 ccaggctt 83389
>emb|Z93023.1|HS958B3 Human DNA sequence from clone RP5-958B3 on chromosome Xp22.11-22.2, complete sequence Length = 107467 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 aagaaaatactgggtttgat 267 |||||||||||||||||||| Sbjct: 98325 aagaaaatactgggtttgat 98306
>emb|AL590075.8| Human DNA sequence from clone RP11-462L13 on chromosome X, complete sequence Length = 135711 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 attctggtggtgtacctcca 233 |||||||||||||||||||| Sbjct: 26623 attctggtggtgtacctcca 26642
>emb|AL672151.8| Zebrafish DNA sequence from clone BUSM1-179B20 in linkage group 19 Contains the abcb3 gene for ATP-binding cassette, sub-family B (MDR/TAP), member 3, the 5' part of the abcb3l2 (abcb3 like 2) gene, the mhc1ufa gene (major histocompatibility complex class I UFA), a putative novel gene, the mhc1uda gene (major histocompatibility complex class I UDA), a reverse transcriptase pseudogene, the tpsn gene for tapasin, the 5' end of a novel gene similar to daxx and a CpG island, complete sequence Length = 102077 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 637 ctttttgtggtaaaataatc 656 |||||||||||||||||||| Sbjct: 65971 ctttttgtggtaaaataatc 65990
>gb|BC030436.1| Mus musculus ankyrin repeat domain 41, mRNA (cDNA clone IMAGE:5374477), partial cds Length = 1702 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 73 tcgcgtagtgctgctagcag 54
>gb|AC105230.10| Homo sapiens chromosome 8, clone RP11-699F21, complete sequence Length = 151517 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 acacagctgatgtcacaagt 196 |||||||||||||||||||| Sbjct: 83516 acacagctgatgtcacaagt 83497
>gb|AC023078.9| Homo sapiens chromosome 11, clone RP11-583F24, complete sequence Length = 163718 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 ttagttcagactgtgggttatcag 533 ||||||||||||| |||||||||| Sbjct: 21833 ttagttcagactgggggttatcag 21810
>gb|AC090142.3| Homo sapiens chromosome 8, clone RP11-200A13, complete sequence Length = 197877 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 634 ttgctttttgtggtaaaata 653 |||||||||||||||||||| Sbjct: 95722 ttgctttttgtggtaaaata 95703
>ref|XM_688593.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT73 (Orphan transporter v7-3) (Solute carrier family 6 member 15) (LOC565315), mRNA Length = 2226 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagttaacgaaggaaaccagcac 112 |||||||| ||||||||||||||| Sbjct: 1047 gaagttaatgaaggaaaccagcac 1024
>ref|XM_682738.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT73 (Orphan transporter v7-3) (Solute carrier family 6 member 15), transcript variant 1 (LOC564144), mRNA Length = 2226 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagttaacgaaggaaaccagcac 112 |||||||| ||||||||||||||| Sbjct: 1047 gaagttaatgaaggaaaccagcac 1024
>ref|XM_703814.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT73 (Orphan transporter v7-3) (Solute carrier family 6 member 15), transcript variant 2 (LOC564144), mRNA Length = 1989 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagttaacgaaggaaaccagcac 112 |||||||| ||||||||||||||| Sbjct: 1041 gaagttaatgaaggaaaccagcac 1018
>gb|DP000032.1| Felis catus target 116 genomic scaffold Length = 376810 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 aaacaattcatctactggac 487 |||||||||||||||||||| Sbjct: 85058 aaacaattcatctactggac 85077
>dbj|AK080768.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930105O07 product:weakly similar to PROBABLE (HHV-6) U1102, VARIANT A DNA, COMPLETE VIRION GENOME (FRAGMENT) [Leishmania major], full insert sequence Length = 2411 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 70 tcgcgtagtgctgctagcag 51
>dbj|AK087444.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130119O17 product:hypothetical protein, full insert sequence Length = 2417 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 70 tcgcgtagtgctgctagcag 51
>dbj|AK083552.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030044A02 product:hypothetical protein, full insert sequence Length = 3071 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 57 tcgcgtagtgctgctagcag 38
>dbj|AK049395.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430003I23 product:hypothetical protein, full insert sequence Length = 2442 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 65 tcgcgtagtgctgctagcag 46
>dbj|AK078830.1| Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched library, clone:8430438L13 product:hypothetical protein, full insert sequence Length = 1936 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 65 tcgcgtagtgctgctagcag 46
>ref|XM_341409.2| PREDICTED: Rattus norvegicus similar to 8430438L13Rik protein (predicted) (LOC361122), mRNA Length = 1377 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 50 tcgcgtagtgctgctagcag 31
>gb|AC009430.2|AC009430 Homo sapiens, clone RP11-45O17, complete sequence Length = 156454 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 attctggtggtgtacctcca 233 |||||||||||||||||||| Sbjct: 125643 attctggtggtgtacctcca 125624
>emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in linkage group 18, complete sequence Length = 189711 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gaagttaacgaaggaaaccagcac 112 |||||||| ||||||||||||||| Sbjct: 46672 gaagttaatgaaggaaaccagcac 46695
>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagttaacgaaggaaaccagcac 112 |||||||| ||||||||||||||| Sbjct: 106683 gaagttaatgaaggaaaccagcac 106660
>emb|AL928866.7| Zebrafish DNA sequence from clone DKEY-11E23 in linkage group 20, complete sequence Length = 249759 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tcacagttgtctcaaagtga 384 |||||||||||||||||||| Sbjct: 5393 tcacagttgtctcaaagtga 5374
>emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in linkage group 18, complete sequence Length = 155713 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagttaacgaaggaaaccagcac 112 |||||||| ||||||||||||||| Sbjct: 118331 gaagttaatgaaggaaaccagcac 118308
>gb|AC007632.4|AC007632 Homo sapiens clone R529C19B from chromosome 18, complete sequence Length = 205959 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 agtaatcagtgtgtacatattaag 356 |||||||||||||| ||||||||| Sbjct: 56160 agtaatcagtgtgtgcatattaag 56137
>ref|NM_172756.1| Mus musculus ankyrin repeat domain 41 (Ankrd41), mRNA Length = 2411 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcgcgtagtgctgctagcag 151 |||||||||||||||||||| Sbjct: 70 tcgcgtagtgctgctagcag 51
>gb|U65400.1|PGU65400 Basidiomycete CECT 20197 phenoloxidase (pox2) gene, complete cds Length = 2400 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gcagcgctggcagcactgag 305 |||||||||||||||||||| Sbjct: 1841 gcagcgctggcagcactgag 1860
>emb|AL808126.10| Mouse DNA sequence from clone RP23-37B4 on chromosome 2, complete sequence Length = 94874 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 tgtcacagttgtctcaaagtgagt 386 ||||||||||||||| |||||||| Sbjct: 26058 tgtcacagttgtctctaagtgagt 26035
>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene island PAGI-3(SG) Length = 128136 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctgcagcgctggcagcactg 303 |||||||||||||||||||| Sbjct: 56082 ctgcagcgctggcagcactg 56101
>dbj|AP004386.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1154F4 Length = 159598 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 634 ttgctttttgtggtaaaata 653 |||||||||||||||||||| Sbjct: 84782 ttgctttttgtggtaaaata 84801 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,949,456 Number of Sequences: 3902068 Number of extensions: 5949456 Number of successful extensions: 107317 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 106925 Number of HSP's gapped (non-prelim): 363 length of query: 684 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 661 effective length of database: 17,143,297,704 effective search space: 11331719782344 effective search space used: 11331719782344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
