Clone Name | rbags9f17 |
---|---|
Clone Library Name | barley_pub |
>CHL1_ARATH (Q05085) Nitrate/chlorate transporter| Length = 590 Score = 155 bits (391), Expect = 1e-37 Identities = 79/154 (51%), Positives = 94/154 (61%) Frame = -1 Query: 660 LQRIGIGLVLSILAMTSAALVEIKRLRVARESAVPEGAPVPMTVFWLIPQFFFVGAGEAF 481 LQRIG+GL +AM AALVE+KRLR A P +P+ + LIPQ+ VG GEA Sbjct: 420 LQRIGLGLFFGSMAMAVAALVELKRLRTAHAHG-PTVKTLPLGFYLLIPQYLIVGIGEAL 478 Query: 480 TYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXSALVTVVHKITGDRRPWIADDLNK 301 Y GQLDFFLRECPKGMK M S LVT+V K TG PWIADDLNK Sbjct: 479 IYTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGKAHPWIADDLNK 538 Query: 300 GELYKFYWLLAGVCLANLVVYLFAARWYKYKAGR 199 G LY FYWL+A + N +++L ++WY YK R Sbjct: 539 GRLYNFYWLVAVLVALNFLIFLVFSKWYVYKEKR 572
>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)| Length = 585 Score = 130 bits (328), Expect = 3e-30 Identities = 70/169 (41%), Positives = 99/169 (58%), Gaps = 3/169 (1%) Frame = -1 Query: 705 PLPAASMATRTGSPRLQRIGIGLVLSILAMTSAALVEIKRLRVARESAVPE-GAPVPMTV 529 PL G +QR+GIGL +S+L M +AA+VEI RL +A + + E GAPVP++V Sbjct: 413 PLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDLGLVESGAPVPISV 472 Query: 528 FWLIPQFFFVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXSALVTVVH 349 W IPQ+F +GA E F +IGQL+FF + P M+++ S ++T+V Sbjct: 473 LWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVT 532 Query: 348 KIT--GDRRPWIADDLNKGELYKFYWLLAGVCLANLVVYLFAARWYKYK 208 T + WI+D+LN G L F+WLLAG+ L N+ VY F+A YK K Sbjct: 533 YFTTRNGQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYKQK 581
>S15A1_RABIT (P36836) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 707 Score = 36.6 bits (83), Expect = 0.077 Identities = 29/112 (25%), Positives = 45/112 (40%) Frame = -1 Query: 546 PVPMTVFWLIPQFFFVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXSA 367 P M + W IPQ+F + +GE I L+F + P MK++ Sbjct: 575 PNTMNMAWQIPQYFLITSGEVVFSITGLEFSYSQAPSNMKSVLQAGWLLTVAVGN----- 629 Query: 366 LVTVVHKITGDRRPWIADDLNKGELYKFYWLLAGVCLANLVVYLFAARWYKY 211 +V + G A +NK + Y L A + L V++ AR+Y Y Sbjct: 630 --IIVLIVAG------AGQINK--QWAEYILFAALLLVVCVIFAIMARFYTY 671
>VSIB_TRYBB (P07208) Variant surface glycoprotein ILTAT 1.1BC precursor (VSG)| Length = 471 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 12/70 (17%) Frame = +2 Query: 458 KSSCPM*VKASPAPTKKNCGMSQKTVMGT-------GAPSGT-----ADSRATRRRLIST 601 K C M V+ + K+N ++QK ++GT G + T ++S TRR + T Sbjct: 47 KKHCQMRVQTAVRKQKENGKLAQKLLIGTITSTAGGGEQTSTTSFLLSNSSPTRRETLET 106 Query: 602 SAAEVMARME 631 + AE+M+++E Sbjct: 107 NQAEIMSQLE 116
>OPT1_DROME (P91679) Oligopeptide transporter 1 (Protein YIN)| Length = 743 Score = 32.0 bits (71), Expect = 1.9 Identities = 25/113 (22%), Positives = 46/113 (40%) Frame = -1 Query: 537 MTVFWLIPQFFFVGAGEAFTYIGQLDFFLRECPKGMKTMXXXXXXXXXXXXXXXXSALVT 358 +++ W +PQ + A E + L+F + P MK++ +V Sbjct: 591 VSILWQLPQIVVMTAAEVMFSVTGLEFSYSQSPPSMKSV--LQACWLLSVAIGNMLVVVI 648 Query: 357 VVHKITGDRRPWIADDLNKGELYKFYWLLAGVCLANLVVYLFAARWYKYKAGR 199 K T + GE + L A + L +++++L+ AR Y+YK R Sbjct: 649 AEFKFTSSQ---------SGE----FTLFASLMLVDMMIFLWLARSYQYKDQR 688
>S15A2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 32.0 bits (71), Expect = 1.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = -1 Query: 537 MTVFWLIPQFFFVGAGEAFTYIGQLDFFLRECPKGMKTM 421 M++ W +PQ+ V AGE + L+F + P MK++ Sbjct: 606 MSIRWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSV 644
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 31.6 bits (70), Expect = 2.5 Identities = 25/80 (31%), Positives = 34/80 (42%) Frame = +1 Query: 421 HGLHPLGALAEEEVELSDVGEGLAGADKKKLRDEPEDRHGHGGALRDGGLPRHAEALDLD 600 HG H G E+E +S + + LR P GHGG +G E + + Sbjct: 149 HGSHGHGHEEEDEDVIS------SERPRHVLRRAPR---GHGGE-EEGEEEEEEEEVSPE 198 Query: 601 ERGGGHGKDGEHETDADPLE 660 R GHGK+ E + D D E Sbjct: 199 HRHRGHGKEDEEDEDDDSTE 218
>DNMT1_PARLI (Q27746) DNA (cytosine-5)-methyltransferase PliMCI (EC 2.1.1.37)| (Dnmt1) (DNA methyltransferase PliMCI) (DNA MTase PliMCI) (MCMT) (M.PliMCI) Length = 1612 Score = 31.6 bits (70), Expect = 2.5 Identities = 22/62 (35%), Positives = 29/62 (46%) Frame = +1 Query: 448 AEEEVELSDVGEGLAGADKKKLRDEPEDRHGHGGALRDGGLPRHAEALDLDERGGGHGKD 627 +EEE+++ G G+ KKK G GG D G R + L DER G K+ Sbjct: 155 SEEEMDMDTPTSGKGGSKKKK------KSKGSGGG--DAGKGRKRKVLGDDERDGVEKKE 206 Query: 628 GE 633 GE Sbjct: 207 GE 208
>GPMI_MYCGA (Q7NAQ5) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 503 Score = 31.2 bits (69), Expect = 3.2 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = +1 Query: 424 GLHPLGALAEEEVELSDVGEGLAGADKKKLRDEPEDRHGHGGALRDGGL 570 G++P ++E + +GE L A+KK+LR +++ H DGG+ Sbjct: 294 GINPSAICYPPKIEKNTLGEVLKNANKKQLRIAETEKYAHVTFFFDGGV 342
>S15A2_RABIT (P46029) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 30.8 bits (68), Expect = 4.2 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = -1 Query: 537 MTVFWLIPQFFFVGAGEAFTYIGQLDFFLRECPKGMKTM 421 +++ W +PQ+ V AGE + L+F + P MK++ Sbjct: 606 VSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSV 644
>GIDB_ZYMMO (Q5NL06) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited| division protein B) Length = 221 Score = 30.0 bits (66), Expect = 7.2 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = -1 Query: 642 GLVLSILAMTSAALVEIKRLRVARESAVPEGAPVPMTVFW-----LIPQFFFVGAGEAFT 478 G++++IL+ + LVE +R RV E A P+T+ + PQ F + AF Sbjct: 90 GIIIAILSEMAVTLVESRRKRVEFLEKAAEAAGTPVTILGQRLENIEPQAFDIITARAFA 149 Query: 477 YIGQL 463 + +L Sbjct: 150 PLDKL 154
>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170) Length = 1214 Score = 29.6 bits (65), Expect = 9.4 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 9/82 (10%) Frame = +1 Query: 439 GALAEEEVELSDVG------EGLAGADKKKLRDEPEDRHGHGGALRDGGLPRHAEALDLD 600 G ++E + + G EG A +KK EP++ GGA+ + + +EA D Sbjct: 742 GTTSDEPERIEESGNDEARVEGQATDEKK----EPKEPREGGGAIEEEAKEKTSEAPKKD 797 Query: 601 ERGGGHGKDGEHE---TDADPL 657 E G G D E E +D DP+ Sbjct: 798 EEKGKEG-DSEKESEKSDGDPI 818
>S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 29.6 bits (65), Expect = 9.4 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -1 Query: 555 EGAPV-PMTVFWLIPQFFFVGAGEAFTYIGQLDFFLRECPKGMKTM 421 E PV +++ W +PQ+ V A E + L+F + P MK++ Sbjct: 599 EDIPVNKLSIAWQLPQYVLVTAAEVMFSVTGLEFSYSQAPSSMKSV 644 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,941,525 Number of Sequences: 219361 Number of extensions: 1524650 Number of successful extensions: 5552 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5300 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5537 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7082949625 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)