ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags9f17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480163.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 462 bits (233), Expect = e-127 Identities = 364/410 (88%), Gaps = 3/410 (0%) Strand = Plus / Minus Query: 136 tcagtgaaggcacggctcggcgtcggccatctcgacgccgttgacgctgccgtcggcgcc 195 |||||| ||||| ||||||||||||||||||||||||||| | ||| || ||||| | Sbjct: 1812 tcagtggaggcatggctcggcgtcggccatctcgacgccgccgtcgc---cggcggcggc 1756 Query: 196 ggggcggccggccttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggc 255 || ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| Sbjct: 1755 ggcgcggccggccttgtacttgtaccacctggcggcgacgaggtatacgaggaggttggc 1696 Query: 256 gaggcagaccccggcgagcagccagtagaacttgtagagctcgcccttgttgaggtcgtc 315 ||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1695 gaggcagacgccggcgaggagccagtagaacttgtggagctggcccttgttgaggtcgtc 1636 Query: 316 ggcgatccacggccggcggtcaccggtgatcttgtgtacgacggtgacgagcgccgagct 375 ||||| ||| || ||||||| ||||||| |||||| ||| ||| ||||||||||||||| Sbjct: 1635 ggcgagccaggggtggcggtcgccggtgagcttgtggacggcggcgacgagcgccgagct 1576 Query: 376 gacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcatccc 435 ||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 1575 gacgaagaaccccagcgagagcgtgctcaggaacagccccgtgctcatcgtcttcatccc 1516 Query: 436 cttggggcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgccggc 495 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1515 cttggggcactcgcggaggaagaagtcgagctggccgatgtaggtgaacgcctcgccggc 1456 Query: 496 gccgacnnnnnnnnnctgcgggatgagccagaagaccgtcatgggcacgg 545 |||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 1455 gccgacgaacaggaactgcgggatcagccagaacacggtcatgggcacgg 1406 Score = 67.9 bits (34), Expect = 4e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 616 catggcaaggatggagagcacgagaccgatgccgatccgctggagccggggtgagcccgt 675 |||||| | |||||| ||||| || |||| |||||| ||||||||| ||||||||||||| Sbjct: 1335 catggcgacgatggacagcaccagcccgacgccgatgcgctggagc-ggggtgagcccgt 1277 Query: 676 gcgggttgcc 685 |||||||||| Sbjct: 1276 gcgggttgcc 1267
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 462 bits (233), Expect = e-127 Identities = 364/410 (88%), Gaps = 3/410 (0%) Strand = Plus / Plus Query: 136 tcagtgaaggcacggctcggcgtcggccatctcgacgccgttgacgctgccgtcggcgcc 195 |||||| ||||| ||||||||||||||||||||||||||| | ||| || ||||| | Sbjct: 3176409 tcagtggaggcatggctcggcgtcggccatctcgacgccgccgtcgc---cggcggcggc 3176465 Query: 196 ggggcggccggccttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggc 255 || ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| Sbjct: 3176466 ggcgcggccggccttgtacttgtaccacctggcggcgacgaggtatacgaggaggttggc 3176525 Query: 256 gaggcagaccccggcgagcagccagtagaacttgtagagctcgcccttgttgaggtcgtc 315 ||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 3176526 gaggcagacgccggcgaggagccagtagaacttgtggagctggcccttgttgaggtcgtc 3176585 Query: 316 ggcgatccacggccggcggtcaccggtgatcttgtgtacgacggtgacgagcgccgagct 375 ||||| ||| || ||||||| ||||||| |||||| ||| ||| ||||||||||||||| Sbjct: 3176586 ggcgagccaggggtggcggtcgccggtgagcttgtggacggcggcgacgagcgccgagct 3176645 Query: 376 gacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcatccc 435 ||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 3176646 gacgaagaaccccagcgagagcgtgctcaggaacagccccgtgctcatcgtcttcatccc 3176705 Query: 436 cttggggcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgccggc 495 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 3176706 cttggggcactcgcggaggaagaagtcgagctggccgatgtaggtgaacgcctcgccggc 3176765 Query: 496 gccgacnnnnnnnnnctgcgggatgagccagaagaccgtcatgggcacgg 545 |||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 3176766 gccgacgaacaggaactgcgggatcagccagaacacggtcatgggcacgg 3176815 Score = 67.9 bits (34), Expect = 4e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 616 catggcaaggatggagagcacgagaccgatgccgatccgctggagccggggtgagcccgt 675 |||||| | |||||| ||||| || |||| |||||| ||||||||| ||||||||||||| Sbjct: 3176886 catggcgacgatggacagcaccagcccgacgccgatgcgctggagc-ggggtgagcccgt 3176944 Query: 676 gcgggttgcc 685 |||||||||| Sbjct: 3176945 gcgggttgcc 3176954 Score = 40.1 bits (20), Expect = 9.7 Identities = 50/60 (83%) Strand = Plus / Plus Query: 266 ccggcgagcagccagtagaacttgtagagctcgcccttgttgaggtcgtcggcgatccac 325 |||||||||||||||||||| | || ||| | ||| || |||||||||||||| |||| Sbjct: 26262448 ccggcgagcagccagtagaagtagtcgaggtggccgcggtcgaggtcgtcggcgaaccac 26262507
>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1177_E11 Length = 92375 Score = 462 bits (233), Expect = e-127 Identities = 364/410 (88%), Gaps = 3/410 (0%) Strand = Plus / Plus Query: 136 tcagtgaaggcacggctcggcgtcggccatctcgacgccgttgacgctgccgtcggcgcc 195 |||||| ||||| ||||||||||||||||||||||||||| | ||| || ||||| | Sbjct: 32489 tcagtggaggcatggctcggcgtcggccatctcgacgccgccgtcgc---cggcggcggc 32545 Query: 196 ggggcggccggccttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggc 255 || ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| Sbjct: 32546 ggcgcggccggccttgtacttgtaccacctggcggcgacgaggtatacgaggaggttggc 32605 Query: 256 gaggcagaccccggcgagcagccagtagaacttgtagagctcgcccttgttgaggtcgtc 315 ||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 32606 gaggcagacgccggcgaggagccagtagaacttgtggagctggcccttgttgaggtcgtc 32665 Query: 316 ggcgatccacggccggcggtcaccggtgatcttgtgtacgacggtgacgagcgccgagct 375 ||||| ||| || ||||||| ||||||| |||||| ||| ||| ||||||||||||||| Sbjct: 32666 ggcgagccaggggtggcggtcgccggtgagcttgtggacggcggcgacgagcgccgagct 32725 Query: 376 gacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcatccc 435 ||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 32726 gacgaagaaccccagcgagagcgtgctcaggaacagccccgtgctcatcgtcttcatccc 32785 Query: 436 cttggggcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgccggc 495 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 32786 cttggggcactcgcggaggaagaagtcgagctggccgatgtaggtgaacgcctcgccggc 32845 Query: 496 gccgacnnnnnnnnnctgcgggatgagccagaagaccgtcatgggcacgg 545 |||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 32846 gccgacgaacaggaactgcgggatcagccagaacacggtcatgggcacgg 32895 Score = 67.9 bits (34), Expect = 4e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 616 catggcaaggatggagagcacgagaccgatgccgatccgctggagccggggtgagcccgt 675 |||||| | |||||| ||||| || |||| |||||| ||||||||| ||||||||||||| Sbjct: 32966 catggcgacgatggacagcaccagcccgacgccgatgcgctggagc-ggggtgagcccgt 33024 Query: 676 gcgggttgcc 685 |||||||||| Sbjct: 33025 gcgggttgcc 33034
>dbj|AK120196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036I24, full insert sequence Length = 3511 Score = 462 bits (233), Expect = e-127 Identities = 364/410 (88%), Gaps = 3/410 (0%) Strand = Plus / Minus Query: 136 tcagtgaaggcacggctcggcgtcggccatctcgacgccgttgacgctgccgtcggcgcc 195 |||||| ||||| ||||||||||||||||||||||||||| | ||| || ||||| | Sbjct: 3275 tcagtggaggcatggctcggcgtcggccatctcgacgccgccgtcgc---cggcggcggc 3219 Query: 196 ggggcggccggccttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggc 255 || ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| Sbjct: 3218 ggcgcggccggccttgtacttgtaccacctggcggcgacgaggtatacgaggaggttggc 3159 Query: 256 gaggcagaccccggcgagcagccagtagaacttgtagagctcgcccttgttgaggtcgtc 315 ||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 3158 gaggcagacgccggcgaggagccagtagaacttgtggagctggcccttgttgaggtcgtc 3099 Query: 316 ggcgatccacggccggcggtcaccggtgatcttgtgtacgacggtgacgagcgccgagct 375 ||||| ||| || ||||||| ||||||| |||||| ||| ||| ||||||||||||||| Sbjct: 3098 ggcgagccaggggtggcggtcgccggtgagcttgtggacggcggcgacgagcgccgagct 3039 Query: 376 gacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcatccc 435 ||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 3038 gacgaagaaccccagcgagagcgtgctcaggaacagccccgtgctcatcgtcttcatccc 2979 Query: 436 cttggggcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgccggc 495 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 2978 cttggggcactcgcggaggaagaagtcgagctggccgatgtaggtgaacgcctcgccggc 2919 Query: 496 gccgacnnnnnnnnnctgcgggatgagccagaagaccgtcatgggcacgg 545 |||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 2918 gccgacgaacaggaactgcgggatcagccagaacacggtcatgggcacgg 2869 Score = 60.0 bits (30), Expect = 1e-05 Identities = 61/70 (87%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 616 catggcaaggatggagagcacgagaccgatgccgatccgctggagccggggtgagcccgt 675 |||||| | |||||| ||||| || |||| |||||| ||||||||| | ||||||||||| Sbjct: 2798 catggcgacgatggacagcaccagcccgacgccgatgcgctggagc-gtggtgagcccgt 2740 Query: 676 gcgggttgcc 685 |||||||||| Sbjct: 2739 gcgggttgcc 2730
>dbj|AK070077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045B01, full insert sequence Length = 1991 Score = 462 bits (233), Expect = e-127 Identities = 364/410 (88%), Gaps = 3/410 (0%) Strand = Plus / Minus Query: 136 tcagtgaaggcacggctcggcgtcggccatctcgacgccgttgacgctgccgtcggcgcc 195 |||||| ||||| ||||||||||||||||||||||||||| | ||| || ||||| | Sbjct: 1579 tcagtggaggcatggctcggcgtcggccatctcgacgccgccgtcgc---cggcggcggc 1523 Query: 196 ggggcggccggccttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggc 255 || ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| Sbjct: 1522 ggcgcggccggccttgtacttgtaccacctggcggcgacgaggtatacgaggaggttggc 1463 Query: 256 gaggcagaccccggcgagcagccagtagaacttgtagagctcgcccttgttgaggtcgtc 315 ||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1462 gaggcagacgccggcgaggagccagtagaacttgtggagctggcccttgttgaggtcgtc 1403 Query: 316 ggcgatccacggccggcggtcaccggtgatcttgtgtacgacggtgacgagcgccgagct 375 ||||| ||| || ||||||| ||||||| |||||| ||| ||| ||||||||||||||| Sbjct: 1402 ggcgagccaggggtggcggtcgccggtgagcttgtggacggcggcgacgagcgccgagct 1343 Query: 376 gacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcatccc 435 ||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 1342 gacgaagaaccccagcgagagcgtgctcaggaacagccccgtgctcatcgtcttcatccc 1283 Query: 436 cttggggcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgccggc 495 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1282 cttggggcactcgcggaggaagaagtcgagctggccgatgtaggtgaacgcctcgccggc 1223 Query: 496 gccgacnnnnnnnnnctgcgggatgagccagaagaccgtcatgggcacgg 545 |||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 1222 gccgacgaacaggaactgcgggatcagccagaacacggtcatgggcacgg 1173 Score = 67.9 bits (34), Expect = 4e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 616 catggcaaggatggagagcacgagaccgatgccgatccgctggagccggggtgagcccgt 675 |||||| | |||||| ||||| || |||| |||||| ||||||||| ||||||||||||| Sbjct: 1102 catggcgacgatggacagcaccagcccgacgccgatgcgctggagc-ggggtgagcccgt 1044 Query: 676 gcgggttgcc 685 |||||||||| Sbjct: 1043 gcgggttgcc 1034
>dbj|AK061227.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A01, full insert sequence Length = 1014 Score = 454 bits (229), Expect = e-124 Identities = 363/410 (88%), Gaps = 3/410 (0%) Strand = Plus / Minus Query: 136 tcagtgaaggcacggctcggcgtcggccatctcgacgccgttgacgctgccgtcggcgcc 195 |||||| ||||| |||| |||||||||||||||||||||| | ||| || ||||| | Sbjct: 602 tcagtggaggcatggcttggcgtcggccatctcgacgccgccgtcgc---cggcggcggc 546 Query: 196 ggggcggccggccttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggc 255 || ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| Sbjct: 545 ggcgcggccggccttgtacttgtaccacctggcggcgacgaggtatacgaggaggttggc 486 Query: 256 gaggcagaccccggcgagcagccagtagaacttgtagagctcgcccttgttgaggtcgtc 315 ||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 485 gaggcagacgccggcgaggagccagtagaacttgtggagctggcccttgttgaggtcgtc 426 Query: 316 ggcgatccacggccggcggtcaccggtgatcttgtgtacgacggtgacgagcgccgagct 375 ||||| ||| || ||||||| ||||||| |||||| ||| ||| ||||||||||||||| Sbjct: 425 ggcgagccaggggtggcggtcgccggtgagcttgtggacggcggcgacgagcgccgagct 366 Query: 376 gacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcatccc 435 ||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 365 gacgaagaaccccagcgagagcgtgctcaggaacagccccgtgctcatcgtcttcatccc 306 Query: 436 cttggggcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgccggc 495 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 305 cttggggcactcgcggaggaagaagtcgagctggccgatgtaggtgaacgcctcgccggc 246 Query: 496 gccgacnnnnnnnnnctgcgggatgagccagaagaccgtcatgggcacgg 545 |||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 245 gccgacgaacaggaactgcgggatcagccagaacacggtcatgggcacgg 196 Score = 67.9 bits (34), Expect = 4e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 616 catggcaaggatggagagcacgagaccgatgccgatccgctggagccggggtgagcccgt 675 |||||| | |||||| ||||| || |||| |||||| ||||||||| ||||||||||||| Sbjct: 125 catggcgacgatggacagcaccagcccgacgccgatgcgctggagc-ggggtgagcccgt 67 Query: 676 gcgggttgcc 685 |||||||||| Sbjct: 66 gcgggttgcc 57
>gb|AY107863.1| Zea mays PCO098705 mRNA sequence Length = 806 Score = 385 bits (194), Expect = e-103 Identities = 338/389 (86%) Strand = Plus / Minus Query: 156 cgtcggccatctcgacgccgttgacgctgccgtcggcgccggggcggccggccttgtact 215 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 438 cgtcggccatctcgacgccgttgacgctgccgtcggcgccggggcggcccgccttgtact 379 Query: 216 tgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagaccccggcgagca 275 ||||||| | |||||||| ||||||||| | ||||||||||||||||| ||||||||| Sbjct: 378 tgtaccagcgggcggcgacgaggtagactagtaggttggcgaggcagacggcggcgagca 319 Query: 276 gccagtagaacttgtagagctcgcccttgttgaggtcgtcggcgatccacggccggcggt 335 |||||||||| |||| ||| ||||||||||||||||| ||||||||| || |||||| Sbjct: 318 gccagtagaagttgtcgaggcggcccttgttgaggtcgttggcgatccaggggtggcggt 259 Query: 336 caccggtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgaga 395 | || |||| | |||| ||| ||| ||||||||| |||||||||||||| || ||||| | Sbjct: 258 cgcccgtgaccctgtgcacggcggcgacgagcgcggagctgacgaagaatcccagcgaca 199 Query: 396 gcgtgctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggagga 455 | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 198 gggtgctgaggaacagccccgtgctcatggtcttcatccccttggggcactcgcgcagga 139 Query: 456 agaagtcgagctgtccgatgtaggtgaaggcctcgccggcgccgacnnnnnnnnnctgcg 515 ||||||||||||| |||||||| ||||| |||||||| || || || ||||| Sbjct: 138 agaagtcgagctggccgatgtacgtgaacgcctcgcccgcccccacgaggaagaactgcg 79 Query: 516 ggatgagccagaagaccgtcatgggcacg 544 ||||||||||||| || | |||||||||| Sbjct: 78 ggatgagccagaacacggacatgggcacg 50
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 210 bits (106), Expect = 5e-51 Identities = 145/158 (91%) Strand = Plus / Minus Query: 341 gtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagcgtg 400 |||| |||||| || |||||||| ||||||| ||||| ||||||||| |||||||||||| Sbjct: 183644 gtgaccttgtgcaccacggtgaccagcgccgtgctgaagaagaagcccagcgagagcgtg 183585 Query: 401 ctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaag 460 || ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 183584 ctcaggaacaggcccgtgctcatggtcttcatccccttggggcactcgcgcaggaagaag 183525 Query: 461 tcgagctgtccgatgtaggtgaaggcctcgccggcgcc 498 || ||||| ||||||||||||||||||||||||||||| Sbjct: 183524 tccagctgcccgatgtaggtgaaggcctcgccggcgcc 183487 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 238 gtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||| |||||||||||||| || || | |||||| ||||||||||| Sbjct: 34270781 gtagaagacgaggttggcgacgccgatgcaggcgagaagccagtagaa 34270828
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 210 bits (106), Expect = 5e-51 Identities = 145/158 (91%) Strand = Plus / Minus Query: 341 gtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagcgtg 400 |||| |||||| || |||||||| ||||||| ||||| ||||||||| |||||||||||| Sbjct: 20711 gtgaccttgtgcaccacggtgaccagcgccgtgctgaagaagaagcccagcgagagcgtg 20652 Query: 401 ctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaag 460 || ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20651 ctcaggaacaggcccgtgctcatggtcttcatccccttggggcactcgcgcaggaagaag 20592 Query: 461 tcgagctgtccgatgtaggtgaaggcctcgccggcgcc 498 || ||||| ||||||||||||||||||||||||||||| Sbjct: 20591 tccagctgcccgatgtaggtgaaggcctcgccggcgcc 20554
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 210 bits (106), Expect = 5e-51 Identities = 145/158 (91%) Strand = Plus / Minus Query: 341 gtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagcgtg 400 |||| |||||| || |||||||| ||||||| ||||| ||||||||| |||||||||||| Sbjct: 117644 gtgaccttgtgcaccacggtgaccagcgccgtgctgaagaagaagcccagcgagagcgtg 117585 Query: 401 ctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaag 460 || ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 117584 ctcaggaacaggcccgtgctcatggtcttcatccccttggggcactcgcgcaggaagaag 117525 Query: 461 tcgagctgtccgatgtaggtgaaggcctcgccggcgcc 498 || ||||| ||||||||||||||||||||||||||||| Sbjct: 117524 tccagctgcccgatgtaggtgaaggcctcgccggcgcc 117487
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 210 bits (106), Expect = 5e-51 Identities = 145/158 (91%) Strand = Plus / Minus Query: 341 gtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagcgtg 400 |||| |||||| || |||||||| ||||||| ||||| ||||||||| |||||||||||| Sbjct: 183644 gtgaccttgtgcaccacggtgaccagcgccgtgctgaagaagaagcccagcgagagcgtg 183585 Query: 401 ctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaag 460 || ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 183584 ctcaggaacaggcccgtgctcatggtcttcatccccttggggcactcgcgcaggaagaag 183525 Query: 461 tcgagctgtccgatgtaggtgaaggcctcgccggcgcc 498 || ||||| ||||||||||||||||||||||||||||| Sbjct: 183524 tccagctgcccgatgtaggtgaaggcctcgccggcgcc 183487 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 238 gtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||| |||||||||||||| || || | |||||| ||||||||||| Sbjct: 34361253 gtagaagacgaggttggcgacgccgatgcaggcgagaagccagtagaa 34361300
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 210 bits (106), Expect = 5e-51 Identities = 145/158 (91%) Strand = Plus / Plus Query: 341 gtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagcgtg 400 |||| |||||| || |||||||| ||||||| ||||| ||||||||| |||||||||||| Sbjct: 79010 gtgaccttgtgcaccacggtgaccagcgccgtgctgaagaagaagcccagcgagagcgtg 79069 Query: 401 ctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaag 460 || ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 79070 ctcaggaacaggcccgtgctcatggtcttcatccccttggggcactcgcgcaggaagaag 79129 Query: 461 tcgagctgtccgatgtaggtgaaggcctcgccggcgcc 498 || ||||| ||||||||||||||||||||||||||||| Sbjct: 79130 tccagctgcccgatgtaggtgaaggcctcgccggcgcc 79167
>ref|NM_197689.1| Oryza sativa (japonica cultivar-group) putative nitrate transporter (OSJNBb0014I11.9), mRNA Length = 2288 Score = 182 bits (92), Expect = 1e-42 Identities = 146/164 (89%) Strand = Plus / Minus Query: 338 ccggtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagc 397 ||||||| |||||| |||| |||||||||| || ||||| ||||||||||| | | Sbjct: 1580 ccggtgaccttgtggacgatggtgacgagcagcgtgctgaagaagaagccgatggcgcag 1521 Query: 398 gtgctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaag 457 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1520 gtgctgaggaagaggcccgtgctcatggtcttcatccccttggggcactcgcggaggaag 1461 Query: 458 aagtcgagctgtccgatgtaggtgaaggcctcgccggcgccgac 501 ||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 1460 aagtcgagctggcccatgtaggtgaacgcctcgccggcgccgac 1417
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 182 bits (92), Expect = 1e-42 Identities = 146/164 (89%) Strand = Plus / Minus Query: 338 ccggtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagc 397 ||||||| |||||| |||| |||||||||| || ||||| ||||||||||| | | Sbjct: 95050 ccggtgaccttgtggacgatggtgacgagcagcgtgctgaagaagaagccgatggcgcag 94991 Query: 398 gtgctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaag 457 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94990 gtgctgaggaagaggcccgtgctcatggtcttcatccccttggggcactcgcggaggaag 94931 Query: 458 aagtcgagctgtccgatgtaggtgaaggcctcgccggcgccgac 501 ||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 94930 aagtcgagctggcccatgtaggtgaacgcctcgccggcgccgac 94887
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 182 bits (92), Expect = 1e-42 Identities = 146/164 (89%) Strand = Plus / Plus Query: 338 ccggtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagc 397 ||||||| |||||| |||| |||||||||| || ||||| ||||||||||| | | Sbjct: 21239309 ccggtgaccttgtggacgatggtgacgagcagcgtgctgaagaagaagccgatggcgcag 21239368 Query: 398 gtgctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaag 457 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21239369 gtgctgaggaagaggcccgtgctcatggtcttcatccccttggggcactcgcggaggaag 21239428 Query: 458 aagtcgagctgtccgatgtaggtgaaggcctcgccggcgccgac 501 ||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 21239429 aagtcgagctggcccatgtaggtgaacgcctcgccggcgccgac 21239472 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 cccttgttgaggtcgtcggcgatcca 324 ||||||||||||||||||| |||||| Sbjct: 767237 cccttgttgaggtcgtcggggatcca 767262
>dbj|AK068409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147D24, full insert sequence Length = 2149 Score = 182 bits (92), Expect = 1e-42 Identities = 146/164 (89%) Strand = Plus / Minus Query: 338 ccggtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagc 397 ||||||| |||||| |||| |||||||||| || ||||| ||||||||||| | | Sbjct: 1679 ccggtgaccttgtggacgatggtgacgagcagcgtgctgaagaagaagccgatggcgcag 1620 Query: 398 gtgctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaag 457 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1619 gtgctgaggaagaggcccgtgctcatggtcttcatccccttggggcactcgcggaggaag 1560 Query: 458 aagtcgagctgtccgatgtaggtgaaggcctcgccggcgccgac 501 ||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 1559 aagtcgagctggcccatgtaggtgaacgcctcgccggcgccgac 1516
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 182 bits (92), Expect = 1e-42 Identities = 146/164 (89%) Strand = Plus / Plus Query: 338 ccggtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagc 397 ||||||| |||||| |||| |||||||||| || ||||| ||||||||||| | | Sbjct: 21250573 ccggtgaccttgtggacgatggtgacgagcagcgtgctgaagaagaagccgatggcgcag 21250632 Query: 398 gtgctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaag 457 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21250633 gtgctgaggaagaggcccgtgctcatggtcttcatccccttggggcactcgcggaggaag 21250692 Query: 458 aagtcgagctgtccgatgtaggtgaaggcctcgccggcgccgac 501 ||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 21250693 aagtcgagctggcccatgtaggtgaacgcctcgccggcgccgac 21250736 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 cccttgttgaggtcgtcggcgatcca 324 ||||||||||||||||||| |||||| Sbjct: 767234 cccttgttgaggtcgtcggggatcca 767259
>dbj|AK105765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E01, full insert sequence Length = 2001 Score = 167 bits (84), Expect = 6e-38 Identities = 144/164 (87%) Strand = Plus / Minus Query: 338 ccggtgatcttgtgtacgacggtgacgagcgccgagctgacgaagaagccgagcgagagc 397 ||||||| |||||| |||| |||||||||| || ||||| ||||||||||| | | Sbjct: 1286 ccggtgaccttgtggacgatggtgacgagcagcgtgctgaagaagaagccgatggcgcag 1227 Query: 398 gtgctaaggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaag 457 ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1226 gtgctgaggaagaggcccgtgctcatggtcttcacccccttggggcactcgcggaggaag 1167 Query: 458 aagtcgagctgtccgatgtaggtgaaggcctcgccggcgccgac 501 ||| ||||||| || ||||||||||| ||||||||||||||||| Sbjct: 1166 aagccgagctggcccatgtaggtgaacgcctcgccggcgccgac 1123
>ref|NM_193465.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1701 Score = 101 bits (51), Expect = 3e-18 Identities = 110/127 (86%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 373 gctgacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcat 432 ||||| ||||||||||||||||||||| | |||||||||||||||||||| |||||||| Sbjct: 1482 gctgaagaagaagccgagcgagagcgtcgtcaggaagagccccgtgctcatcgtcttcat 1423 Query: 433 ccccttggg-gcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgc 491 ||||||||| | |||| || ||||||||| ||||| || ||||| |||| ||||||| Sbjct: 1422 ccccttgggcgacctcg-tgatgaagaagtccagctgccccgtgtagatgaacgcctcgc 1364 Query: 492 cggcgcc 498 ||||||| Sbjct: 1363 cggcgcc 1357 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Minus Query: 583 gaggcgcttgatctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagacc 642 ||||||||| ||||| ||||||||||| || |||| | ||||||||||| |||| || Sbjct: 1278 gaggcgcttcttctcgcagagcgcggcggcggccatgccgaggatggagagggcgaggcc 1219 Query: 643 gatgccgatc 652 |||||||||| Sbjct: 1218 gatgccgatc 1209
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 101 bits (51), Expect = 3e-18 Identities = 110/127 (86%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 373 gctgacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcat 432 ||||| ||||||||||||||||||||| | |||||||||||||||||||| |||||||| Sbjct: 21036712 gctgaagaagaagccgagcgagagcgtcgtcaggaagagccccgtgctcatcgtcttcat 21036653 Query: 433 ccccttggg-gcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgc 491 ||||||||| | |||| || ||||||||| ||||| || ||||| |||| ||||||| Sbjct: 21036652 ccccttgggcgacctcg-tgatgaagaagtccagctgccccgtgtagatgaacgcctcgc 21036594 Query: 492 cggcgcc 498 ||||||| Sbjct: 21036593 cggcgcc 21036587 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 208 cttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagacccc 267 ||||||| ||||||||| ||| || ||||||| || ||| |||||||| ||||| | | Sbjct: 39303545 cttgtacgtgtaccaccgtgcgatgaggaggtaggcggcgaagttggcgacgcagagcac 39303486 Query: 268 ggcgagcagccagtagaa 285 ||||||||||||| |||| Sbjct: 39303485 ggcgagcagccagaagaa 39303468 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Minus Query: 583 gaggcgcttgatctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagacc 642 ||||||||| ||||| ||||||||||| || |||| | ||||||||||| |||| || Sbjct: 21036508 gaggcgcttcttctcgcagagcgcggcggcggccatgccgaggatggagagggcgaggcc 21036449 Query: 643 gatgccgatc 652 |||||||||| Sbjct: 21036448 gatgccgatc 21036439 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Minus Query: 216 tgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagaccccggcgagca 275 ||||||| |||||| || |||||||||| ||| |||| ||||| || | ||||||||| Sbjct: 2296911 tgtaccagctggcgatgacgaggtagacgccgaagttgatgaggctgagcacggcgagca 2296852 Query: 276 gccagtagaa 285 ||||| |||| Sbjct: 2296851 gccagaagaa 2296842 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 625 gatggagagcacgagaccgatgccgatccgctg 657 ||||||||||||||| |||| ||||| |||||| Sbjct: 31351506 gatggagagcacgaggccgacgccgacccgctg 31351474 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 238 gtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||| |||||||||||||| || || | |||||| ||||||||||| Sbjct: 16209758 gtagaagacgaggttggcgatgccgatgcaggcgagaagccagtagaa 16209711
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 101 bits (51), Expect = 3e-18 Identities = 110/127 (86%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 373 gctgacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcat 432 ||||| ||||||||||||||||||||| | |||||||||||||||||||| |||||||| Sbjct: 4257 gctgaagaagaagccgagcgagagcgtcgtcaggaagagccccgtgctcatcgtcttcat 4198 Query: 433 ccccttggg-gcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgc 491 ||||||||| | |||| || ||||||||| ||||| || ||||| |||| ||||||| Sbjct: 4197 ccccttgggcgacctcg-tgatgaagaagtccagctgccccgtgtagatgaacgcctcgc 4139 Query: 492 cggcgcc 498 ||||||| Sbjct: 4138 cggcgcc 4132 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Minus Query: 583 gaggcgcttgatctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagacc 642 ||||||||| ||||| ||||||||||| || |||| | ||||||||||| |||| || Sbjct: 4053 gaggcgcttcttctcgcagagcgcggcggcggccatgccgaggatggagagggcgaggcc 3994 Query: 643 gatgccgatc 652 |||||||||| Sbjct: 3993 gatgccgatc 3984
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 101 bits (51), Expect = 3e-18 Identities = 110/127 (86%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 373 gctgacgaagaagccgagcgagagcgtgctaaggaagagccccgtgctcatggtcttcat 432 ||||| ||||||||||||||||||||| | |||||||||||||||||||| |||||||| Sbjct: 99914 gctgaagaagaagccgagcgagagcgtcgtcaggaagagccccgtgctcatcgtcttcat 99855 Query: 433 ccccttggg-gcactcgcggaggaagaagtcgagctgtccgatgtaggtgaaggcctcgc 491 ||||||||| | |||| || ||||||||| ||||| || ||||| |||| ||||||| Sbjct: 99854 ccccttgggcgacctcg-tgatgaagaagtccagctgccccgtgtagatgaacgcctcgc 99796 Query: 492 cggcgcc 498 ||||||| Sbjct: 99795 cggcgcc 99789 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Minus Query: 583 gaggcgcttgatctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagacc 642 ||||||||| ||||| ||||||||||| || |||| | ||||||||||| |||| || Sbjct: 99710 gaggcgcttcttctcgcagagcgcggcggcggccatgccgaggatggagagggcgaggcc 99651 Query: 643 gatgccgatc 652 |||||||||| Sbjct: 99650 gatgccgatc 99641
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 5e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 417 tgctcatggtcttcatccccttggggcactcgcggaggaagaagtcgagctgtccgatgt 476 |||||||||||||||| ||||||||||||||| | | ||||||||| ||||| ||||||| Sbjct: 5522486 tgctcatggtcttcatgcccttggggcactcgtgcaagaagaagtctagctg-ccgatgt 5522544 Query: 477 aggtgaaggcctcgcc 492 | |||||||||||||| Sbjct: 5522545 atgtgaaggcctcgcc 5522560 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 404 aggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcg 463 |||||||||||||||||||| | |||||||| || || |||||||| |||||| || Sbjct: 22389907 aggaagagccccgtgctcatcgacttcatccgctccggcgcctcgcggatgaagaactcc 22389966 Query: 464 agctgtccgatgtaggtgaaggcctcgccggcgcc 498 ||||| |||| ||| | ||| |||||||||||||| Sbjct: 22389967 agctgcccgacgtacgcgaacgcctcgccggcgcc 22390001 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 gcccttgttgaggtcgtcggcgatccac 325 ||||| |||||||||||||| ||||||| Sbjct: 28771121 gccctggttgaggtcgtcggagatccac 28771094
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 87.7 bits (44), Expect = 5e-14 Identities = 69/76 (90%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 417 tgctcatggtcttcatccccttggggcactcgcggaggaagaagtcgagctgtccgatgt 476 |||||||||||||||| ||||||||||||||| | | ||||||||| ||||| ||||||| Sbjct: 67221 tgctcatggtcttcatgcccttggggcactcgtgcaagaagaagtctagctg-ccgatgt 67279 Query: 477 aggtgaaggcctcgcc 492 | |||||||||||||| Sbjct: 67280 atgtgaaggcctcgcc 67295
>dbj|AB128925.1| Prunus persica PpNRT1 gene for nitrate transporter, partial cds Length = 3608 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 416 gtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcgagctgtccgatg 475 ||||||||||||||||||||||| |||||||| | |||||||||||| ||||| || || Sbjct: 3345 gtgctcatggtcttcatccccttagggcactccctgaggaagaagtcaagctgcccaata 3286 Query: 476 taggtgaaggcctcgccgg 494 || ||||||||||| |||| Sbjct: 3285 tatgtgaaggcctccccgg 3267
>dbj|AB089677.1| Prunus persica PpNRT1 mRNA for nitrate transporter, complete cds Length = 2093 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 416 gtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcgagctgtccgatg 475 ||||||||||||||||||||||| |||||||| | |||||||||||| ||||| || || Sbjct: 1606 gtgctcatggtcttcatccccttagggcactccctgaggaagaagtcaagctgcccaata 1547 Query: 476 taggtgaaggcctcgccgg 494 || ||||||||||| |||| Sbjct: 1546 tatgtgaaggcctccccgg 1528
>gb|AF420016.1| Narcissus pseudonarcissus putative low-affinity nitrate transporter mRNA, partial cds Length = 371 Score = 73.8 bits (37), Expect = 7e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 353 acgacggtgacgagcgccgagctgacgaagaagccgagcgagagcgtgctaaggaagagc 412 |||| ||| |||||||||||||| | |||||| || | || || |||||||| || | | Sbjct: 192 acgatggtcacgagcgccgagctaaggaagaaacctaaagatagtgtgctaagaaacatc 133 Query: 413 cccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcgagctgtccg 472 || |||||||| ||||||||||||||||||||||| | | |||||| || | ||||||| Sbjct: 132 ccggtgctcatagtcttcatccccttggggcactccctcaagaagaaatccaactgtccg 73 Query: 473 atgta 477 ||||| Sbjct: 72 atgta 68
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 404 aggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcg 463 |||||||||||||||||||| | |||||||| || || |||||||| |||||| || Sbjct: 148551 aggaagagccccgtgctcatcgacttcatccgctccggcgcctcgcggatgaagaactcc 148610 Query: 464 agctgtccgatgtaggtgaaggcctcgccggcgcc 498 ||||| |||| ||| | ||| |||||||||||||| Sbjct: 148611 agctgcccgacgtacgcgaacgcctcgccggcgcc 148645
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 404 aggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcg 463 |||||||||||||||||||| | |||||||| || || |||||||| |||||| || Sbjct: 46126 aggaagagccccgtgctcatcgacttcatccgctccggcgcctcgcggatgaagaactcc 46185 Query: 464 agctgtccgatgtaggtgaaggcctcgccggcgcc 498 ||||| |||| ||| | ||| |||||||||||||| Sbjct: 46186 agctgcccgacgtacgcgaacgcctcgccggcgcc 46220
>dbj|AK120486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113P19, full insert sequence Length = 2206 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 404 aggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcg 463 |||||||||||||||||||| | |||||||| || || |||||||| |||||| || Sbjct: 1622 aggaagagccccgtgctcatcgacttcatccgctccggcgcctcgcggatgaagaactcc 1563 Query: 464 agctgtccgatgtaggtgaaggcctcgccggcgcc 498 ||||| |||| ||| | ||| |||||||||||||| Sbjct: 1562 agctgcccgacgtacgcgaacgcctcgccggcgcc 1528
>dbj|AK072036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106D24, full insert sequence Length = 1500 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 404 aggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcg 463 |||||||||||||||||||| | |||||||| || || |||||||| |||||| || Sbjct: 971 aggaagagccccgtgctcatcgacttcatccgctccggcgcctcgcggatgaagaactcc 912 Query: 464 agctgtccgatgtaggtgaaggcctcgccggcgcc 498 ||||| |||| ||| | ||| |||||||||||||| Sbjct: 911 agctgcccgacgtacgcgaacgcctcgccggcgcc 877
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 595 ctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagaccgatgccgatccg 654 |||||||||||||||| | |||||| | |||||||||||| | |||| ||||||||| Sbjct: 7261311 ctcgacgagcgcggcgaccgccatggcgacgatggagagcaccatcccgacgccgatccg 7261252 Query: 655 ctggagc 661 ||||||| Sbjct: 7261251 ctggagc 7261245 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 595 ctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagaccgatgccgatccg 654 ||||||||||||||| | |||||| | |||||||||||| | |||| ||||||||| Sbjct: 7242776 ctcgacgagcgcggctaccgccatggcgacgatggagagcaccatcccgacgccgatccg 7242835 Query: 655 ctggagc 661 ||||||| Sbjct: 7242836 ctggagc 7242842 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 gcccttgttgaggtcgtcggcgatccac 325 ||||| |||||||||||||| ||||||| Sbjct: 29310489 gccctcgttgaggtcgtcggggatccac 29310462
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 595 ctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagaccgatgccgatccg 654 |||||||||||||||| | |||||| | |||||||||||| | |||| ||||||||| Sbjct: 138722 ctcgacgagcgcggcgaccgccatggcgacgatggagagcaccatcccgacgccgatccg 138663 Query: 655 ctggagc 661 ||||||| Sbjct: 138662 ctggagc 138656 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 595 ctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagaccgatgccgatccg 654 ||||||||||||||| | |||||| | |||||||||||| | |||| ||||||||| Sbjct: 120187 ctcgacgagcgcggctaccgccatggcgacgatggagagcaccatcccgacgccgatccg 120246 Query: 655 ctggagc 661 ||||||| Sbjct: 120247 ctggagc 120253
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 595 ctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagaccgatgccgatccg 654 |||||||||||||||| | |||||| | |||||||||||| | |||| ||||||||| Sbjct: 96315 ctcgacgagcgcggcgaccgccatggcgacgatggagagcaccatcccgacgccgatccg 96256 Query: 655 ctggagc 661 ||||||| Sbjct: 96255 ctggagc 96249 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 595 ctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagaccgatgccgatccg 654 ||||||||||||||| | |||||| | |||||||||||| | |||| ||||||||| Sbjct: 77780 ctcgacgagcgcggctaccgccatggcgacgatggagagcaccatcccgacgccgatccg 77839 Query: 655 ctggagc 661 ||||||| Sbjct: 77840 ctggagc 77846
>dbj|AK064959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A13, full insert sequence Length = 1765 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 595 ctcgacgagcgcggcggaggtcatggcaaggatggagagcacgagaccgatgccgatccg 654 |||||||||||||||| | |||||| | |||||||||||| | |||| ||||||||| Sbjct: 1261 ctcgacgagcgcggcgaccgccatggcgacgatggagagcaccatcccgacgccgatccg 1202 Query: 655 ctggagc 661 ||||||| Sbjct: 1201 ctggagc 1195
>ref|NM_190326.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1674 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 208 cttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagacccc 267 ||||||| ||||||||| ||| || ||||||| || ||| |||||||| ||||| | | Sbjct: 1659 cttgtacgtgtaccaccgtgcgatgaggaggtaggcggcgaagttggcgacgcagagcac 1600 Query: 268 ggcgagcagccagtagaa 285 ||||||||||||| |||| Sbjct: 1599 ggcgagcagccagaagaa 1582
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 208 cttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagacccc 267 ||||||| ||||||||| ||| || ||||||| || ||| |||||||| ||||| | | Sbjct: 105251 cttgtacgtgtaccaccgtgcgatgaggaggtaggcggcgaagttggcgacgcagagcac 105192 Query: 268 ggcgagcagccagtagaa 285 ||||||||||||| |||| Sbjct: 105191 ggcgagcagccagaagaa 105174
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Minus Query: 208 cttgtacttgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagacccc 267 ||||||| ||||||||| ||| || ||||||| || ||| |||||||| ||||| | | Sbjct: 84791 cttgtacgtgtaccaccgtgcgatgaggaggtaggcggcgaagttggcgacgcagagcac 84732 Query: 268 ggcgagcagccagtagaa 285 ||||||||||||| |||| Sbjct: 84731 ggcgagcagccagaagaa 84714
>emb|AJ495773.1|HVU495773 Hordeum vulgare partial mRNA for putative peptide transporter protein Length = 411 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 298 gcccttgttgaggtcgtcggcgatccac 325 |||||||||||||||||||| ||||||| Sbjct: 76 gcccttgttgaggtcgtcggagatccac 49
>ref|XM_472779.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1779 Score = 46.1 bits (23), Expect = 0.16 Identities = 77/95 (81%) Strand = Plus / Minus Query: 404 aggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcg 463 ||||| || ||||||||||||| |||||||| || |||| ||| | || |||||| || Sbjct: 1499 aggaacaggcccgtgctcatggacttcatccgctcgggggcctccctgatgaagaactcc 1440 Query: 464 agctgtccgatgtaggtgaaggcctcgccggcgcc 498 ||||| || | ||| | ||| |||||||||||||| Sbjct: 1439 agctgccccacgtacgcgaacgcctcgccggcgcc 1405
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 46.1 bits (23), Expect = 0.16 Identities = 77/95 (81%) Strand = Plus / Plus Query: 404 aggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcg 463 ||||| || ||||||||||||| |||||||| || |||| ||| | || |||||| || Sbjct: 43786 aggaacaggcccgtgctcatggacttcatccgctcgggggcctccctgatgaagaactcc 43845 Query: 464 agctgtccgatgtaggtgaaggcctcgccggcgcc 498 ||||| || | ||| | ||| |||||||||||||| Sbjct: 43846 agctgccccacgtacgcgaacgcctcgccggcgcc 43880
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.16 Identities = 77/95 (81%) Strand = Plus / Plus Query: 404 aggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcg 463 ||||| || ||||||||||||| |||||||| || |||| ||| | || |||||| || Sbjct: 23153594 aggaacaggcccgtgctcatggacttcatccgctcgggggcctccctgatgaagaactcc 23153653 Query: 464 agctgtccgatgtaggtgaaggcctcgccggcgcc 498 ||||| || | ||| | ||| |||||||||||||| Sbjct: 23153654 agctgccccacgtacgcgaacgcctcgccggcgcc 23153688 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ccggcgagcagccagtagaa 285 |||||||||||||||||||| Sbjct: 35398350 ccggcgagcagccagtagaa 35398331
>dbj|AK111143.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E04, full insert sequence Length = 1039 Score = 46.1 bits (23), Expect = 0.16 Identities = 77/95 (81%) Strand = Plus / Plus Query: 404 aggaagagccccgtgctcatggtcttcatccccttggggcactcgcggaggaagaagtcg 463 ||||| || ||||||||||||| |||||||| || |||| ||| | || |||||| || Sbjct: 346 aggaacaggcccgtgctcatggacttcatccgctcgggggcctccctgatgaagaactcc 405 Query: 464 agctgtccgatgtaggtgaaggcctcgccggcgcc 498 ||||| || | ||| | ||| |||||||||||||| Sbjct: 406 agctgccccacgtacgcgaacgcctcgccggcgcc 440
>gb|AY112123.1| Zea mays CL32673_1 mRNA sequence Length = 611 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 259 gcagaccccggcgagcagccagtagaa 285 ||||| ||||||||||||||||||||| Sbjct: 301 gcagagcccggcgagcagccagtagaa 327
>ref|NM_194571.1| Oryza sativa (japonica cultivar-group) putative LeOPT1 - oligopeptide transporter (OSJNBb0012A20.8), mRNA Length = 1737 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 299 cccttgttgaggtcgtcggcgatcca 324 ||||||||||||||||||| |||||| Sbjct: 1631 cccttgttgaggtcgtcggggatcca 1606
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 cccttgttgaggtcgtcggcgatcca 324 ||||||||||||||||||| |||||| Sbjct: 48094 cccttgttgaggtcgtcggggatcca 48119
>ref|XM_773982.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_49_97404_97033) partial mRNA Length = 372 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 280 gtagaacttgtagagctcgcccttgt 305 ||||||||||||||||||| |||||| Sbjct: 85 gtagaacttgtagagctcggccttgt 110
>ref|XM_773983.1| Giardia lamblia ATCC 50803 splicing factor (GLP_49_97129_97710) partial mRNA Length = 582 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 280 gtagaacttgtagagctcgcccttgt 305 ||||||||||||||||||| |||||| Sbjct: 192 gtagaacttgtagagctcggccttgt 167
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 cccttgttgaggtcgtcggcgatcca 324 ||||||||||||||||||| |||||| Sbjct: 767237 cccttgttgaggtcgtcggggatcca 767262
>ref|NM_184319.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1984 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Minus Query: 216 tgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagaccccggcgagca 275 ||||||| |||||| || |||||||||| ||| |||| ||||| || | ||||||||| Sbjct: 1787 tgtaccagctggcgatgacgaggtagacgccgaagttgatgaggctgagcacggcgagca 1728 Query: 276 gccagtagaa 285 ||||| |||| Sbjct: 1727 gccagaagaa 1718
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 147 acggctcggcgtcggccatctcgacg 172 ||||||||||||| |||||||||||| Sbjct: 826709 acggctcggcgtctgccatctcgacg 826734
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Minus Query: 216 tgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagaccccggcgagca 275 ||||||| |||||| || |||||||||| ||| |||| ||||| || | ||||||||| Sbjct: 25961 tgtaccagctggcgatgacgaggtagacgccgaagttgatgaggctgagcacggcgagca 25902 Query: 276 gccagtagaa 285 ||||| |||| Sbjct: 25901 gccagaagaa 25892
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Minus Query: 216 tgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagaccccggcgagca 275 ||||||| |||||| || |||||||||| ||| |||| ||||| || | ||||||||| Sbjct: 80495 tgtaccagctggcgatgacgaggtagacgccgaagttgatgaggctgagcacggcgagca 80436 Query: 276 gccagtagaa 285 ||||| |||| Sbjct: 80435 gccagaagaa 80426
>dbj|AK102216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L04, full insert sequence Length = 3090 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Minus Query: 216 tgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagaccccggcgagca 275 ||||||| |||||| || |||||||||| ||| |||| ||||| || | ||||||||| Sbjct: 2906 tgtaccagctggcgatgacgaggtagacgccgaagttgatgaggctgagcacggcgagca 2847 Query: 276 gccagtagaa 285 ||||| |||| Sbjct: 2846 gccagaagaa 2837
>ref|NM_210314.1| Eremothecium gossypii AER100Cp (AER100C), mRNA Length = 465 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 147 acggctcggcgtcggccatctcgacg 172 ||||||||||||| |||||||||||| Sbjct: 445 acggctcggcgtctgccatctcgacg 420
>dbj|AK070036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E09, full insert sequence Length = 2307 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Minus Query: 216 tgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagaccccggcgagca 275 ||||||| |||||| || |||||||||| ||| |||| ||||| || | ||||||||| Sbjct: 1889 tgtaccagctggcgatgacgaggtagacgccgaagttgatgaggctgagcacggcgagca 1830 Query: 276 gccagtagaa 285 ||||| |||| Sbjct: 1829 gccagaagaa 1820
>dbj|AK068679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160C22, full insert sequence Length = 1879 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 299 cccttgttgaggtcgtcggcgatcca 324 ||||||||||||||||||| |||||| Sbjct: 1559 cccttgttgaggtcgtcggggatcca 1534
>dbj|AK058745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H02, full insert sequence Length = 1984 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Minus Query: 216 tgtaccacctggcggcgaagaggtagacgacgaggttggcgaggcagaccccggcgagca 275 ||||||| |||||| || |||||||||| ||| |||| ||||| || | ||||||||| Sbjct: 1787 tgtaccagctggcgatgacgaggtagacgccgaagttgatgaggctgagcacggcgagca 1728 Query: 276 gccagtagaa 285 ||||| |||| Sbjct: 1727 gccagaagaa 1718
>gb|AF023472.1|AF023472 Hordeum vulgare peptide transporter (ptr1) mRNA, complete cds Length = 2260 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Minus Query: 236 aggtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||||||| ||| |||| |||||| || | |||||||||||||| |||| Sbjct: 1936 aggtagacggcgaagttgacgaggctgagcgcggcgagcagccagaagaa 1887
>gb|DQ275145.1| Petromyzon marinus sodium channel 2 mRNA, partial cds Length = 1911 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cgctgccgtcggcgccggggcggccg 205 ||||||||||||||||||||| |||| Sbjct: 220 cgctgccgtcggcgccggggccgccg 195
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 tactagtagtatgtatgtatg 70 ||||||||||||||||||||| Sbjct: 139219 tactagtagtatgtatgtatg 139199
>ref|NM_191215.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1845 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 625 gatggagagcacgagaccgatgccgatccgctg 657 ||||||||||||||| |||| ||||| |||||| Sbjct: 1359 gatggagagcacgaggccgacgccgacccgctg 1327
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 641 ccgatgccgatccgctggagc 661 ||||||||||||||||||||| Sbjct: 6178563 ccgatgccgatccgctggagc 6178583
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 tactagtagtatgtatgtatg 70 ||||||||||||||||||||| Sbjct: 108720 tactagtagtatgtatgtatg 108740
>ref|XM_741225.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g01395) partial mRNA Length = 1227 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 gcacgggggcgccctccgggacggc 564 |||||||||||||||||||| |||| Sbjct: 808 gcacgggggcgccctccgggtcggc 784
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 625 gatggagagcacgagaccgatgccgatccgctg 657 ||||||||||||||| |||| ||||| |||||| Sbjct: 105789 gatggagagcacgaggccgacgccgacccgctg 105757
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 547 ggcgccctccgggacggcgga 567 ||||||||||||||||||||| Sbjct: 7076782 ggcgccctccgggacggcgga 7076762
>gb|AY110608.1| Zea mays CL7462_1 mRNA sequence Length = 1000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 162 ccatctcgacgccgttgacgctgcc 186 ||||||||||||||| ||||||||| Sbjct: 133 ccatctcgacgccgtcgacgctgcc 109
>ref|NM_106099.2| Arabidopsis thaliana exonuclease AT1G74390 mRNA, complete cds Length = 1765 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 actcgcggaggaagaagtcgagct 467 ||||| |||||||||||||||||| Sbjct: 708 actcgaggaggaagaagtcgagct 685
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cgtcggccatctcgacgccg 175 |||||||||||||||||||| Sbjct: 2168052 cgtcggccatctcgacgccg 2168071
>ref|XM_483444.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1530 Score = 40.1 bits (20), Expect = 9.7 Identities = 50/60 (83%) Strand = Plus / Minus Query: 266 ccggcgagcagccagtagaacttgtagagctcgcccttgttgaggtcgtcggcgatccac 325 |||||||||||||||||||| | || ||| | ||| || |||||||||||||| |||| Sbjct: 1415 ccggcgagcagccagtagaagtagtcgaggtggccgcggtcgaggtcgtcggcgaaccac 1356
>ref|XM_474472.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1533 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ccggcgagcagccagtagaa 285 |||||||||||||||||||| Sbjct: 1394 ccggcgagcagccagtagaa 1375
>ref|NM_185156.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1758 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 238 gtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||| |||||||||||||| || || | |||||| ||||||||||| Sbjct: 1644 gtagaagacgaggttggcgacgccgatgcaggcgagaagccagtagaa 1597
>ref|XM_467305.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1934 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 gcccttgttgaggtcgtcggcgatccac 325 ||||| |||||||||||||| ||||||| Sbjct: 1767 gccctggttgaggtcgtcggagatccac 1740
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 gcttgatctcgacgagcgcg 607 |||||||||||||||||||| Sbjct: 2241304 gcttgatctcgacgagcgcg 2241285
>ref|NM_184563.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 238 gtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||| |||||||||||||| || || | |||||| ||||||||||| Sbjct: 696 gtagaagacgaggttggcgatgccgatgcaggcgagaagccagtagaa 649
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 641 ccgatgccgatccgctggag 660 |||||||||||||||||||| Sbjct: 136015 ccgatgccgatccgctggag 135996
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 gcttgatctcgacgagcgcg 607 |||||||||||||||||||| Sbjct: 1482180 gcttgatctcgacgagcgcg 1482161
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atctcgacgccgttgacgct 183 |||||||||||||||||||| Sbjct: 145982 atctcgacgccgttgacgct 146001
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 gcttgatctcgacgagcgcg 607 |||||||||||||||||||| Sbjct: 2712703 gcttgatctcgacgagcgcg 2712684
>gb|AE009268.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 38 of 187 of the complete sequence Length = 11208 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 585 ggcgcttgatctcgacgagc 604 |||||||||||||||||||| Sbjct: 737 ggcgcttgatctcgacgagc 718
>gb|AE008344.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 148 of 187 of the complete sequence Length = 12819 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 585 ggcgcttgatctcgacgagc 604 |||||||||||||||||||| Sbjct: 10473 ggcgcttgatctcgacgagc 10492
>gb|AY456034.1| Gibberella moniliformis putative histidine kinase HHK1p (HHK1) gene, complete cds Length = 7240 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gctcgcccttgttgaggtcg 313 |||||||||||||||||||| Sbjct: 5225 gctcgcccttgttgaggtcg 5206
>ref|XM_810113.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510747.130) partial mRNA Length = 3426 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gctgccgtcggcgccggggc 200 |||||||||||||||||||| Sbjct: 2294 gctgccgtcggcgccggggc 2275
>gb|AC133002.6| Oryza sativa chromosome 11 BAC OJ1123_D06 genomic sequence, complete sequence Length = 88378 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 641 ccgatgccgatccgctggag 660 |||||||||||||||||||| Sbjct: 4826 ccgatgccgatccgctggag 4807
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 cttgatctcgacgagcgcgg 608 |||||||||||||||||||| Sbjct: 2359661 cttgatctcgacgagcgcgg 2359680
>ref|XM_965770.1| PREDICTED: Tribolium castaneum similar to CG11033-PA (LOC659466), mRNA Length = 3027 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 gcgggatgagccagaagacc 532 |||||||||||||||||||| Sbjct: 730 gcgggatgagccagaagacc 711
>gb|BT000288.1| Arabidopsis thaliana putative exonuclease (At1g74390) mRNA, complete cds Length = 1725 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 actcgcggaggaagaagtcgagct 467 ||||| |||||||||||||||||| Sbjct: 687 actcgaggaggaagaagtcgagct 664
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gacgctgccgtcggcgccgg 197 |||||||||||||||||||| Sbjct: 292383 gacgctgccgtcggcgccgg 292364
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gacgctgccgtcggcgccgg 197 |||||||||||||||||||| Sbjct: 17450 gacgctgccgtcggcgccgg 17431
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atctcgacgccgttgacgct 183 |||||||||||||||||||| Sbjct: 1541574 atctcgacgccgttgacgct 1541593
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 gcttgatctcgacgagcgcg 607 |||||||||||||||||||| Sbjct: 1670766 gcttgatctcgacgagcgcg 1670785
>emb|AL807369.1|NCG15D1 Neurospora crassa DNA linkage group V cosmid contig G15D1 Length = 62178 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 agaggtagacgacgaggttg 253 |||||||||||||||||||| Sbjct: 60214 agaggtagacgacgaggttg 60233
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ccggcgagcagccagtagaa 285 |||||||||||||||||||| Sbjct: 23153 ccggcgagcagccagtagaa 23134
>emb|AL451022.1|NC2E4 Neurospora crassa DNA linkage group V Cosmid contig 2E4 Length = 62070 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 agaggtagacgacgaggttg 253 |||||||||||||||||||| Sbjct: 14096 agaggtagacgacgaggttg 14115
>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8 Length = 98192 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 599 acgagcgcggcggaggtcat 618 |||||||||||||||||||| Sbjct: 83208 acgagcgcggcggaggtcat 83189
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gaaggcctcgccggcgccga 500 |||||||||||||||||||| Sbjct: 377250 gaaggcctcgccggcgccga 377269
>gb|AY099717.1| Arabidopsis thaliana putative exonuclease (At1g74390) mRNA, complete cds Length = 1765 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 actcgcggaggaagaagtcgagct 467 ||||| |||||||||||||||||| Sbjct: 708 actcgaggaggaagaagtcgagct 685
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gctgccgtcggcgccggggc 200 |||||||||||||||||||| Sbjct: 90348 gctgccgtcggcgccggggc 90329
>ref|XM_623385.1| PREDICTED: Apis mellifera similar to CG5701-PA (LOC413034), mRNA Length = 2225 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 cccgtgctcatggtcttcat 432 |||||||||||||||||||| Sbjct: 2113 cccgtgctcatggtcttcat 2132
>ref|XM_396485.2| PREDICTED: Apis mellifera similar to ENSANGP00000013437 (LOC413034), mRNA Length = 3152 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 cccgtgctcatggtcttcat 432 |||||||||||||||||||| Sbjct: 3040 cccgtgctcatggtcttcat 3059
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atactagtagtatgtatgta 68 |||||||||||||||||||| Sbjct: 24175339 atactagtagtatgtatgta 24175358 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cggcgagcagccagtagaac 286 |||||||||||||||||||| Sbjct: 7169503 cggcgagcagccagtagaac 7169484
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 641 ccgatgccgatccgctggag 660 |||||||||||||||||||| Sbjct: 10042234 ccgatgccgatccgctggag 10042215
>emb|BX816736.1|CNS0ADE2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1680 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 actcgcggaggaagaagtcgagct 467 ||||| |||||||||||||||||| Sbjct: 672 actcgaggaggaagaagtcgagct 649
>gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BAC F1M20 genomic sequence, complete sequence Length = 134402 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 actcgcggaggaagaagtcgagct 467 ||||| |||||||||||||||||| Sbjct: 19007 actcgaggaggaagaagtcgagct 19030
>gb|AC007391.3| Homo sapiens BAC clone RP11-429J10 from 2, complete sequence Length = 183991 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 cggaggaagaagtcgagctg 468 |||||||||||||||||||| Sbjct: 139102 cggaggaagaagtcgagctg 139083
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 238 gtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||| |||||||||||||| || || | |||||| ||||||||||| Sbjct: 64217 gtagaagacgaggttggcgacgccgatgcaggcgagaagccagtagaa 64170
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 ggtgaaggcctcgccggcgccgac 501 ||||||||| |||||||||||||| Sbjct: 75547 ggtgaaggcgtcgccggcgccgac 75524
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 gcccttgttgaggtcgtcggcgatccac 325 ||||| |||||||||||||| ||||||| Sbjct: 87694 gccctggttgaggtcgtcggagatccac 87667
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 gcccttgttgaggtcgtcggcgatccac 325 ||||| |||||||||||||| ||||||| Sbjct: 21370 gccctcgttgaggtcgtcggggatccac 21343
>dbj|AP004821.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0676G08 Length = 153154 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 238 gtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||| |||||||||||||| || || | |||||| ||||||||||| Sbjct: 86165 gtagaagacgaggttggcgatgccgatgcaggcgagaagccagtagaa 86118
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 gcccttgttgaggtcgtcggcgatccac 325 ||||| |||||||||||||| ||||||| Sbjct: 73287 gccctcgttgaggtcgtcggggatccac 73260
>gb|AE004976.1| Halobacterium sp. NRC-1 section 7 of 170 of the complete genome Length = 11723 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 cgttgacgctgccgtcggcgccgg 197 ||||||||||||||||| |||||| Sbjct: 5717 cgttgacgctgccgtcgtcgccgg 5694
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E06 Length = 112241 Score = 40.1 bits (20), Expect = 9.7 Identities = 50/60 (83%) Strand = Plus / Plus Query: 266 ccggcgagcagccagtagaacttgtagagctcgcccttgttgaggtcgtcggcgatccac 325 |||||||||||||||||||| | || ||| | ||| || |||||||||||||| |||| Sbjct: 95373 ccggcgagcagccagtagaagtagtcgaggtggccgcggtcgaggtcgtcggcgaaccac 95432
>dbj|AK120737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003I19, full insert sequence Length = 2281 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cggcgagcagccagtagaac 286 |||||||||||||||||||| Sbjct: 1744 cggcgagcagccagtagaac 1725
>dbj|AK119527.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B05, full insert sequence Length = 1762 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 gcccttgttgaggtcgtcggcgatccac 325 ||||| |||||||||||||| ||||||| Sbjct: 1654 gccctcgttgaggtcgtcggggatccac 1627
>dbj|AK111563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066M24, full insert sequence Length = 1789 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atactagtagtatgtatgta 68 |||||||||||||||||||| Sbjct: 1725 atactagtagtatgtatgta 1744
>dbj|AK109931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-B06, full insert sequence Length = 1934 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 gcccttgttgaggtcgtcggcgatccac 325 ||||| |||||||||||||| ||||||| Sbjct: 1767 gccctggttgaggtcgtcggagatccac 1740
>dbj|AK105635.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-D11, full insert sequence Length = 1996 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 641 ccgatgccgatccgctggag 660 |||||||||||||||||||| Sbjct: 1322 ccgatgccgatccgctggag 1303
>dbj|AK101066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023F23, full insert sequence Length = 1935 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 641 ccgatgccgatccgctggag 660 |||||||||||||||||||| Sbjct: 1335 ccgatgccgatccgctggag 1316
>dbj|AK099193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109G05, full insert sequence Length = 2088 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 238 gtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||| |||||||||||||| || || | |||||| ||||||||||| Sbjct: 1798 gtagaagacgaggttggcgacgccgatgcaggcgagaagccagtagaa 1751
>dbj|AK073739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065N21, full insert sequence Length = 950 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atactagtagtatgtatgta 68 |||||||||||||||||||| Sbjct: 883 atactagtagtatgtatgta 902
>dbj|AK060866.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H02, full insert sequence Length = 1035 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atactagtagtatgtatgta 68 |||||||||||||||||||| Sbjct: 994 atactagtagtatgtatgta 1013
>dbj|AK058972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D02, full insert sequence Length = 2129 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 238 gtagacgacgaggttggcgaggcagaccccggcgagcagccagtagaa 285 ||||| |||||||||||||| || || | |||||| ||||||||||| Sbjct: 1797 gtagaagacgaggttggcgacgccgatgcaggcgagaagccagtagaa 1750
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ccggcgagcagccagtagaa 285 |||||||||||||||||||| Sbjct: 30060 ccggcgagcagccagtagaa 30041
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 gcttgatctcgacgagcgcg 607 |||||||||||||||||||| Sbjct: 2430711 gcttgatctcgacgagcgcg 2430730 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 143 aggcacggctcggcgtcggccatctcga 170 |||||||||||||||||| |||||||| Sbjct: 2045673 aggcacggctcggcgtcgctcatctcga 2045646 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 640 accgatgccgatccgctgga 659 |||||||||||||||||||| Sbjct: 1764804 accgatgccgatccgctgga 1764785
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 641 ccgatgccgatccgctggag 660 |||||||||||||||||||| Sbjct: 10113931 ccgatgccgatccgctggag 10113912
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atactagtagtatgtatgta 68 |||||||||||||||||||| Sbjct: 24103545 atactagtagtatgtatgta 24103564 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cggcgagcagccagtagaac 286 |||||||||||||||||||| Sbjct: 7169382 cggcgagcagccagtagaac 7169363
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cggcgagcagccagtagaac 286 |||||||||||||||||||| Sbjct: 86612 cggcgagcagccagtagaac 86631
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atactagtagtatgtatgta 68 |||||||||||||||||||| Sbjct: 60030 atactagtagtatgtatgta 60049
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cggcgagcagccagtagaac 286 |||||||||||||||||||| Sbjct: 25816 cggcgagcagccagtagaac 25797
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 cgtcggcgccggggcggccggcct 209 |||||||||||| ||||||||||| Sbjct: 740826 cgtcggcgccggagcggccggcct 740849 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,415,833 Number of Sequences: 3902068 Number of extensions: 4415833 Number of successful extensions: 88318 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83673 Number of HSP's gapped (non-prelim): 4635 length of query: 705 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 682 effective length of database: 17,143,297,704 effective search space: 11691729034128 effective search space used: 11691729034128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
