Clone Name | rbags9f15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48) | 30 | 6.4 | 2 | PGK_METTH (O27121) Phosphoglycerate kinase (EC 2.7.2.3) | 29 | 8.3 |
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>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1748 Score = 29.6 bits (65), Expect = 6.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +2 Query: 56 TLNSKTGCTFSKPSRIHASHAASMVQP 136 T++S GCTFS P+ IH +++ P Sbjct: 1059 TISSSQGCTFSDPAFIHLDRNTALLSP 1085
>PGK_METTH (O27121) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 411 Score = 29.3 bits (64), Expect = 8.3 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = -2 Query: 544 RKMLPLLMPVTGQLFQASHSQQLTLTGAMLQVKQQAARNLPRLL 413 RK+ PLL F A+H Q +L G L+V A R + R L Sbjct: 146 RKLAPLLDYFINDAFAAAHRSQPSLVGFALRVPSAAGRVMEREL 189 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,228,527 Number of Sequences: 219361 Number of extensions: 1350092 Number of successful extensions: 3780 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3612 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3780 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)