ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9f11 |
|---|---|
| Clone Library Name | barley_pub |
>ANM6_HUMAN (Q96LA8) Protein arginine N-methyltransferase 6 (EC 2.1.1.-)| (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 6) Length = 375 Score = 45.4 bits (106), Expect = 2e-04 Identities = 22/61 (36%), Positives = 31/61 (50%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGSSASIGTAEC 534 WF F +KP+VLSTSPF THW Q + EP+ + +D V G + + + Sbjct: 291 WFQVTFPGGE-SEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDN 349 Query: 533 P 531 P Sbjct: 350 P 350
>ANM6_BOVIN (Q5E9L5) Protein arginine N-methyltransferase 6 (EC 2.1.1.-)| (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 6) Length = 375 Score = 45.4 bits (106), Expect = 2e-04 Identities = 22/50 (44%), Positives = 27/50 (54%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVG 564 WF F +KPVVLSTSPF THW Q + EP+ + +D V G Sbjct: 291 WFQVTFPGGD-SEKPVVLSTSPFHPVTHWKQALLYLNEPVQVEQDTDVSG 339
>ANM6_MOUSE (Q6NZB1) Protein arginine N-methyltransferase 6 (EC 2.1.1.-)| (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 6) Length = 378 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/61 (34%), Positives = 31/61 (50%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGSSASIGTAEC 534 WF F +KP+VLSTSPF THW Q + EP+ + +D + G + + + Sbjct: 294 WFQVTFPGGD-SEKPLVLSTSPFHPATHWKQALLYLNEPVPVEQDTDISGEITLLPSPDN 352 Query: 533 P 531 P Sbjct: 353 P 353
>ANM2_HUMAN (P55345) Protein arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 433 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/51 (41%), Positives = 26/51 (50%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGS 561 WF F S P VLST PF THW QT+F ++P+ + V GS Sbjct: 342 WFSVHFQSLQEGQPPQVLSTGPFHPTTHWKQTLFMMDDPVPVHTGDVVTGS 392
>ANM1_SCHPO (Q9URX7) Probable protein arginine N-methyltransferase (EC 2.1.1.-)| Length = 339 Score = 43.1 bits (100), Expect = 8e-04 Identities = 29/87 (33%), Positives = 39/87 (44%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGSSASIGTAEC 534 WFD F++ C KP+ ST PFS THW QT+F + + VK G + + + AE Sbjct: 253 WFDIEFSA--CH-KPIKFSTGPFSRYTHWKQTVFYTHKDLT-VKAGEYIRGTITCKPAE- 307 Query: 533 PAVTIRSRISIVRASEHRSIDISIETT 453 HR +DI I T Sbjct: 308 --------------GNHRELDIDISYT 320
>ANM3_HUMAN (O60678) Protein arginine N-methyltransferase 3 (EC 2.1.1.-)| (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 3) Length = 531 Score = 39.7 bits (91), Expect = 0.009 Identities = 22/55 (40%), Positives = 31/55 (56%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGSSASI 549 +FD F C ++ VV ST P ST THW QT+F E+P + VK G + ++ Sbjct: 454 YFDIYFEKN-CHNR-VVFSTGPQSTKTHWKQTVFLLEKPFS-VKAGEALKGKVTV 505
>ANM3_RAT (O70467) Protein arginine N-methyltransferase 3 (EC 2.1.1.-)| (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 3) Length = 528 Score = 38.9 bits (89), Expect = 0.016 Identities = 23/55 (41%), Positives = 30/55 (54%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGSSASI 549 +FD F C ++ VV ST P ST THW QTIF E+P VK G + ++ Sbjct: 451 YFDIYFEKN-CHNR-VVFSTGPQSTKTHWKQTIFLLEKPFP-VKAGEALKGKITV 502
>ANM3_MOUSE (Q922H1) Protein arginine N-methyltransferase 3 (EC 2.1.1.-)| (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 3) Length = 532 Score = 38.5 bits (88), Expect = 0.021 Identities = 22/55 (40%), Positives = 30/55 (54%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGSSASI 549 +FD F C ++ VV ST P ST THW QT+F E+P VK G + ++ Sbjct: 455 YFDIYFEKN-CHNR-VVFSTGPQSTKTHWKQTVFLLEKPFP-VKAGEALKGKITV 506
>ANM2_MOUSE (Q9R144) Protein arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 448 Score = 37.0 bits (84), Expect = 0.060 Identities = 19/49 (38%), Positives = 24/49 (48%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVV 567 WF F S V+ST P THW QT+F ++P+ V G VV Sbjct: 354 WFSVYFQSLEEGQPQQVVSTGPLHPTTHWKQTLFMMDDPVP-VHTGDVV 401
>HMT1_YEAST (P38074) HNRNP arginine N-methyltransferase (EC 2.1.1.-) (ODP1| protein) Length = 348 Score = 36.6 bits (83), Expect = 0.078 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPI 594 WFD F + K +PV ST P + THW QTIF F + + Sbjct: 257 WFDIVFPAPKGK-RPVEFSTGPHAPYTHWKQTIFYFPDDL 295
>CD008_HUMAN (P78312) Protein C4orf8 (Protein IT14)| Length = 1265 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/89 (23%), Positives = 39/89 (43%) Frame = -3 Query: 617 IFTFEEPIAMVKDGSVVGSSASIGTAECPAVTIRSRISIVRASEHRSIDISIETTGVSSD 438 ++ F++ M + V+ +S++ + C A T++S S R S R + G+S + Sbjct: 595 LYNFQDAF-MEANKVVMATSSATSSVSCTATTVQSSNSQFRVSSKRPPSVGDVFHGISKE 653 Query: 437 GRKRSWPAQIFNL*AMICPCDEILPVPFS 351 + S PA N + P + P S Sbjct: 654 DHRHSAPAAPRNSPTGLAPLPALSPAALS 682
>HUWE1_HUMAN (Q7Z6Z7) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (Mcl-1 ubiquitin ligase E3) (Mule) (ARF-binding protein 1) (ARF-BP1) Length = 4374 Score = 31.6 bits (70), Expect = 2.5 Identities = 29/130 (22%), Positives = 49/130 (37%) Frame = +1 Query: 274 SAQKVFNQIHQKIRRIAVGNQTAKTVEKGTGKISSQGQIIAQRLKI*AGQLRFRPSELTP 453 S QK F ++ Q I ++ + A K TG++ S G A ++ QL + Sbjct: 3718 STQKFFLRVLQVIIQLRDDTRRANKKAKQTGRLGSSGLGSASSIQAAVRQLEAEADAIIQ 3777 Query: 454 VVSIDMSMLRCSEALTMLMRDLIVTAGHSAVPIDADEPTTDPSFTIAMGSSKVKIVCDQ* 633 +V R +A T + P+D D+P+ T ++ S Sbjct: 3778 MVREGQRARRQQQAATSESSQSEASVRREESPMDVDQPSPSAQDTQSIASD--------- 3828 Query: 634 VGVEKGEVER 663 G +GE E+ Sbjct: 3829 -GTPQGEKEK 3837
>ANM8_MOUSE (Q6PAK3) Protein arginine N-methyltransferase 8 (EC 2.1.1.-)| (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 4) Length = 394 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -3 Query: 704 TGFTSRFCK-DKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGS 561 T F F K K + ST+P + THW QT+F E+ + + + + G+ Sbjct: 309 TYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGT 357
>ANM8_HUMAN (Q9NR22) Protein arginine N-methyltransferase 8 (EC 2.1.1.-)| (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 4) Length = 394 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -3 Query: 704 TGFTSRFCK-DKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGS 561 T F F K K + ST+P + THW QT+F E+ + + + + G+ Sbjct: 309 TYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGT 357
>ANM1_HUMAN (Q99873) Protein arginine N-methyltransferase 1 (EC 2.1.1.-)| (Interferon receptor 1-bound protein 4) Length = 361 Score = 30.8 bits (68), Expect = 4.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -3 Query: 659 STSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGS 561 STSP S THW QT+F E+ + + + G+ Sbjct: 292 STSPESPYTHWKQTVFYMEDYLTVKTGEEIFGT 324
>ANM1_RAT (Q63009) Protein arginine N-methyltransferase 1 (EC 2.1.1.-)| Length = 353 Score = 30.8 bits (68), Expect = 4.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -3 Query: 659 STSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGS 561 STSP S THW QT+F E+ + + + G+ Sbjct: 284 STSPESPYTHWKQTVFYMEDYLTVKTGEEIFGT 316
>ANM1_MOUSE (Q9JIF0) Protein arginine N-methyltransferase 1 (EC 2.1.1.-)| Length = 371 Score = 30.8 bits (68), Expect = 4.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -3 Query: 659 STSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGS 561 STSP S THW QT+F E+ + + + G+ Sbjct: 302 STSPESPYTHWKQTVFYMEDYLTVKTGEEIFGT 334
>CARM1_MOUSE (Q9WVG6) Histone-arginine methyltransferase CARM1 (EC 2.1.1.125)| (EC 2.1.1.-) (Protein arginine N-methyltransferase 4) (Coactivator-associated arginine methyltransferase 1) Length = 608 Score = 30.0 bits (66), Expect = 7.3 Identities = 27/97 (27%), Positives = 37/97 (38%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGSSASIGTAEC 534 WFD F V LST+P THW Q F+ P+ K G + + Sbjct: 391 WFDVAFIGSIMT---VWLSTAPTEPLTHWYQVRCLFQSPL-FAKAGDTLSGTC------- 439 Query: 533 PAVTIRSRISIVRASEHRSIDISIETTGVSSDGRKRS 423 ++ A++ +S DISI V G K S Sbjct: 440 ----------LLIANKRQSYDISI-VAQVDQTGSKSS 465
>CARM1_HUMAN (Q86X55) Histone-arginine methyltransferase CARM1 (EC 2.1.1.125)| (EC 2.1.1.-) (Protein arginine N-methyltransferase 4) (Coactivator-associated arginine methyltransferase 1) Length = 585 Score = 30.0 bits (66), Expect = 7.3 Identities = 27/97 (27%), Positives = 37/97 (38%) Frame = -3 Query: 713 WFDTGFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAMVKDGSVVGSSASIGTAEC 534 WFD F V LST+P THW Q F+ P+ K G + + Sbjct: 390 WFDVAFIGSIMT---VWLSTAPTEPLTHWYQVRCLFQSPL-FAKAGDTLSGTC------- 438 Query: 533 PAVTIRSRISIVRASEHRSIDISIETTGVSSDGRKRS 423 ++ A++ +S DISI V G K S Sbjct: 439 ----------LLIANKRQSYDISI-VAQVDQTGSKSS 464
>LAX1_BOVIN (Q58CT8) Lymphocyte transmembrane adapter 1 (Membrane-associated| adapter protein LAX) Length = 387 Score = 30.0 bits (66), Expect = 7.3 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = -2 Query: 642 HANSLVADNLHLRRAHRDGKGWVGRWLIGIYWHG*MPS-CDDQVPHQHREGLRA 484 H S D LH+ RAH G+ +GIY + P C + P H +RA Sbjct: 131 HVPSRAGDALHMHRAHTHAMGYA----VGIYDNAMRPQMCGNLAPSPHYVNVRA 180
>YMI3_YEAST (Q04526) Hypothetical 47.3 kDa protein in TUB1-CPR3 intergenic| region Length = 418 Score = 29.6 bits (65), Expect = 9.6 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -3 Query: 701 GFTSRFCKDKPVVLSTSPFSTPTHWSQTIFTFEEPIAM 588 G++S C P++ S S +TP HWSQ + T P+A+ Sbjct: 44 GYSSPRCLPTPILPSMST-NTPVHWSQQVVTI--PVAV 78
>TRMD_NOCFA (Q5YS38) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 231 Score = 29.6 bits (65), Expect = 9.6 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = +3 Query: 594 DGLFEGEDCLRPVSWRG 644 DGL EG RPVSWRG Sbjct: 173 DGLLEGPSYTRPVSWRG 189
>DDL_PROMM (Q7V8L9) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 353 Score = 29.6 bits (65), Expect = 9.6 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -3 Query: 548 GTAECPAVTIRSRISIVRASEHRSIDISIETTGVSSDGRKRSWPAQI 408 G +E AV+IRS I++V A + E + D R R WPA + Sbjct: 14 GASEEHAVSIRSAITVVGALRSEVNNNRFEVIAIYIDQRGRWWPAGV 60
>ARGJ_METKA (Q8TX15) Arginine biosynthesis bifunctional protein argJ [Includes:| Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (Ornithine transacetylase) (OATase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate syn Length = 387 Score = 29.6 bits (65), Expect = 9.6 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +1 Query: 496 LTMLMRDLIVTAGHSAVPIDADEPTTDPSFTIAMGSSKVKIVCD 627 L M +RD +V + + +D DE T D +A GSS +K+ D Sbjct: 189 LQMWLRD-VVNDTFNMITVDGDESTNDSVVLLANGSSNLKVGSD 231 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,657,096 Number of Sequences: 219361 Number of extensions: 2042479 Number of successful extensions: 5875 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 5673 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5872 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
