Clone Information

BLAST Search Result

Clone Name	rbags9f10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL11_THEMA (P29395) 50S ribosomal protein L11	32	0.29
2	RM11_MOUSE (Q9CQF0) 39S ribosomal protein L11, mitochondrial pre...	32	0.49
3	RM11_HUMAN (Q9Y3B7) 39S ribosomal protein L11, mitochondrial pre...	32	0.49
4	RL11_WIGBR (Q8D237) 50S ribosomal protein L11	32	0.49
5	RM19_YEAST (P53875) 60S ribosomal protein L19, mitochondrial pre...	31	0.64
6	RL11_THETH (P36238) 50S ribosomal protein L11	31	0.84
7	RL11_THET8 (Q5SLP6) 50S ribosomal protein L11	31	0.84
8	RL11_THET2 (P62442) 50S ribosomal protein L11	31	0.84
9	RM11_RECAM (O21234) Mitochondrial 60S ribosomal protein L11	30	1.1
10	RL11_GEOSL (P62434) 50S ribosomal protein L11	30	1.4
11	LIVK_SALTY (P0A1W6) Leucine-specific-binding protein precursor (...	30	1.4
12	LIVK_SALTI (P0A1W7) Leucine-specific-binding protein precursor (...	30	1.4
13	GSTT3_MUSDO (P46432) Glutathione S-transferase 3 (EC 2.5.1.18) (...	30	1.4
14	GSTT2_MUSDO (P46431) Glutathione S-transferase 2 (EC 2.5.1.18) (...	30	1.4
15	RL11_MYCPN (P75550) 50S ribosomal protein L11	30	1.9
16	RL11_BLOFL (Q7VRP3) 50S ribosomal protein L11	30	1.9
17	GLUC_PIG (P01274) Glucagon precursor [Contains: Glicentin; Glice...	29	2.4
18	RL11_CLOAB (Q97EG5) 50S ribosomal protein L11	29	2.4
19	GSTT4_MUSDO (P46433) Glutathione S-transferase 4 (EC 2.5.1.18) (...	29	2.4
20	RM11_CAEEL (P34264) Probable 39S ribosomal protein L11, mitochon...	29	3.2
21	RL11_WOLPM (P62444) 50S ribosomal protein L11	29	3.2
22	GLUC_BOVIN (P01272) Glucagon precursor [Contains: Glicentin; Gli...	28	4.2
23	YMF13_MARPO (P38457) Hypothetical 17.9 kDa protein in NAD1-COB i...	28	4.2
24	RL11_MYCMS (P62437) 50S ribosomal protein L11	28	4.2
25	RL11_COXBU (Q83ET4) 50S ribosomal protein L11	28	4.2
26	RL11_THETN (Q8R7U2) 50S ribosomal protein L11	28	4.2
27	RL11_DESVH (P62433) 50S ribosomal protein L11	28	4.2
28	GLUC_CAVPO (P05110) Glucagon precursor [Contains: Glicentin; Gli...	28	5.5
29	RL11_MYCGE (P47327) 50S ribosomal protein L11	28	5.5
30	LIVJ_SALTY (P17215) Leu/Ile/Val/Thr-binding protein precursor (L...	28	5.5
31	GLUC_SHEEP (Q8MJ25) Glucagon precursor [Contains: Glicentin; Gli...	28	7.1
32	RL11_SELRU (Q84IF5) 50S ribosomal protein L11	28	7.1
33	REP_BUCAP (O51889) ATP-dependent DNA helicase rep (EC 3.6.1.-)	28	7.1
34	LIVJ_ECOLI (P0AD96) Leu/Ile/Val-binding protein precursor (LIV-BP)	28	7.1
35	LIVJ_ECOL6 (P0AD97) Leu/Ile/Val-binding protein precursor (LIV-BP)	28	7.1
36	LIVJ_ECO57 (P0AD98) Leu/Ile/Val-binding protein precursor (LIV-BP)	28	7.1
37	RL11_AQUAE (O67758) 50S ribosomal protein L11	28	7.1
38	RL11_TREPA (O83265) 50S ribosomal protein L11	28	7.1
39	GLUC_OCTDE (P22890) Glucagon precursor [Contains: Glicentin; Gli...	27	9.3
40	RL11_LEGPL (Q5WZM3) 50S ribosomal protein L11	27	9.3
41	RL11_LEGPH (Q5ZYQ4) 50S ribosomal protein L11	27	9.3
42	RL11_LEGPA (Q5X870) 50S ribosomal protein L11	27	9.3
43	RL11_PARUW (Q6MDM5) 50S ribosomal protein L11	27	9.3
44	RL11_BUCAP (Q8KA66) 50S ribosomal protein L11	27	9.3

>RL11_THEMA (P29395) 50S ribosomal protein L11|
          Length = 140

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 18/31 (58%), Positives = 19/31 (61%)
 Frame = -1

Query: 365 KQSXPFCKHMSLEALCKSIIGTAKSMGIEIV 273
           K   P     SLEA  K I GTAKSMGIE+V
Sbjct: 109 KTKMPDLNANSLEAAMKIIEGTAKSMGIEVV 139

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>RM11_MOUSE (Q9CQF0) 39S ribosomal protein L11, mitochondrial precursor (L11mt)|
           (MRP-L11)
          Length = 192

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 13/23 (56%), Positives = 20/23 (86%)
 Frame = -1

Query: 332 LEALCKSIIGTAKSMGIEIVKDL 264
           L ++ +SIIG+A+S+GI +VKDL
Sbjct: 137 LSSVVRSIIGSARSLGIRVVKDL 159

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>RM11_HUMAN (Q9Y3B7) 39S ribosomal protein L11, mitochondrial precursor (L11mt)|
           (MRP-L11)
          Length = 192

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 13/23 (56%), Positives = 20/23 (86%)
 Frame = -1

Query: 332 LEALCKSIIGTAKSMGIEIVKDL 264
           L ++ +SIIG+A+S+GI +VKDL
Sbjct: 137 LSSVVRSIIGSARSLGIRVVKDL 159

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>RL11_WIGBR (Q8D237) 50S ribosomal protein L11|
          Length = 142

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -1

Query: 365 KQSXPFCKHMSLEALCKSIIGTAKSMGIEI 276
           K+  P     +L ++ KSIIGTAKSMG+ I
Sbjct: 111 KKKSPDMTGSTLNSISKSIIGTAKSMGLSI 140

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>RM19_YEAST (P53875) 60S ribosomal protein L19, mitochondrial precursor (YmL19)|
          Length = 158

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -1

Query: 368 LKQSXPFCKHMSLEALCKSIIGTAKSMGIEIV 273
           +K+S      + +E + KSI+G AKSMGI++V
Sbjct: 126 IKKSDERHSLLEMEGIVKSIVGVAKSMGIKVV 157

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>RL11_THETH (P36238) 50S ribosomal protein L11|
          Length = 147

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 365 KQSXPFCKHMSLEALCKSIIGTAKSMGIEIV 273
           KQ  P      LEA  + I G+A+SMG+E+V
Sbjct: 109 KQKMPDLNTTDLEAAARMIAGSARSMGVEVV 139

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>RL11_THET8 (Q5SLP6) 50S ribosomal protein L11|
          Length = 147

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 365 KQSXPFCKHMSLEALCKSIIGTAKSMGIEIV 273
           KQ  P      LEA  + I G+A+SMG+E+V
Sbjct: 109 KQKMPDLNTTDLEAAARMIAGSARSMGVEVV 139

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>RL11_THET2 (P62442) 50S ribosomal protein L11|
          Length = 147

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 365 KQSXPFCKHMSLEALCKSIIGTAKSMGIEIV 273
           KQ  P      LEA  + I G+A+SMG+E+V
Sbjct: 109 KQKMPDLNTTDLEAAARMIAGSARSMGVEVV 139

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>RM11_RECAM (O21234) Mitochondrial 60S ribosomal protein L11|
          Length = 145

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 10/23 (43%), Positives = 20/23 (86%)
 Frame = -1

Query: 341 HMSLEALCKSIIGTAKSMGIEIV 273
           ++ ++++CKS+IG+ KSMGI+ +
Sbjct: 119 NLDIKSICKSLIGSVKSMGIKTI 141

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>RL11_GEOSL (P62434) 50S ribosomal protein L11|
          Length = 141

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = -1

Query: 335 SLEALCKSIIGTAKSMGIEIV 273
           SLEA  +++ GTA+SMG+EIV
Sbjct: 120 SLEAAMRTVEGTARSMGVEIV 140

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>LIVK_SALTY (P0A1W6) Leucine-specific-binding protein precursor (LS-BP) (L-BP)|
          Length = 369

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 228 KYA*ELVQPDRSEILHDFNAHGLGRA---DDGLAQG 326
           KY  E V+P R  I+HD   +G G A    DGL QG
Sbjct: 153 KYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKQG 188

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>LIVK_SALTI (P0A1W7) Leucine-specific-binding protein precursor (LS-BP) (L-BP)|
          Length = 369

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 228 KYA*ELVQPDRSEILHDFNAHGLGRA---DDGLAQG 326
           KY  E V+P R  I+HD   +G G A    DGL QG
Sbjct: 153 KYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKQG 188

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>GSTT3_MUSDO (P46432) Glutathione S-transferase 3 (EC 2.5.1.18) (GST|
           class-theta)
          Length = 210

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -1

Query: 341 HMSLEALCKSIIGTAKSMGIEIVKDL 264
           ++ L A C+S+I TAK++GIE+ K L
Sbjct: 5   YLPLSAPCRSVIMTAKALGIELNKKL 30

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>GSTT2_MUSDO (P46431) Glutathione S-transferase 2 (EC 2.5.1.18) (GST|
           class-theta)
          Length = 210

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -1

Query: 341 HMSLEALCKSIIGTAKSMGIEIVKDL 264
           ++ L A C+S+I TAK++GIE+ K L
Sbjct: 5   YLPLSAPCRSVIMTAKALGIELNKKL 30

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>RL11_MYCPN (P75550) 50S ribosomal protein L11|
          Length = 136

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -1

Query: 335 SLEALCKSIIGTAKSMGIEIVK 270
           ++EA  K ++GTAK MGIE+++
Sbjct: 115 TVEAALKMVLGTAKQMGIEVIE 136

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>RL11_BLOFL (Q7VRP3) 50S ribosomal protein L11|
          Length = 146

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/25 (48%), Positives = 21/25 (84%)
 Frame = -1

Query: 338 MSLEALCKSIIGTAKSMGIEIVKDL 264
           ++LE+  KSI+GTA+S+G+E+  +L
Sbjct: 122 LNLESASKSIMGTARSIGLEVEDNL 146

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>GLUC_PIG (P01274) Glucagon precursor [Contains: Glicentin; Glicentin-related|
           polypeptide (GRPP); Oxyntomodulin (OXY) (OXM); Glucagon;
           Glucagon-like peptide 1 (GLP-1); Glucagon-like peptide
           1(7-37) (GLP-1(7-37)); Glucagon-like peptide 1(7-36)
           (GLP-1(7-36)
          Length = 180

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
 Frame = +3

Query: 30  WNRGSSRGRQKLTTRPPPNGYTXEXCHMIQTDHQDGRRQISTDKSHPYLSFKSDETRLAV 209
           W R      +K  + P P           QTD  D   Q++ DK H   +F SD ++  +
Sbjct: 19  WQRSLQNTEEKSRSFPAP-----------QTDPLDDPDQMTEDKRHSQGTFTSDYSKY-L 66

Query: 210 DEHKIKKYA*ELVQPDRSE----ILHD-FNAHGLGRADDGLAQGLEGHVLAE 350
           D  + + +   L+   R++      HD F  H  G     ++  LEG    E
Sbjct: 67  DSRRAQDFVQWLMNTKRNKNNIAKRHDEFERHAEGTFTSDVSSYLEGQAAKE 118

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>RL11_CLOAB (Q97EG5) 50S ribosomal protein L11|
          Length = 141

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -1

Query: 335 SLEALCKSIIGTAKSMGIEIV 273
           SLEA    I GTA+SMG+E+V
Sbjct: 120 SLEAAMSMIAGTARSMGVEVV 140

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>GSTT4_MUSDO (P46433) Glutathione S-transferase 4 (EC 2.5.1.18) (GST|
           class-theta)
          Length = 210

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = -1

Query: 341 HMSLEALCKSIIGTAKSMGIEIVKDL 264
           ++ L A C+S++ TAK++GIE+ K L
Sbjct: 5   YLPLSAPCRSVLMTAKALGIELNKKL 30

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>RM11_CAEEL (P34264) Probable 39S ribosomal protein L11, mitochondrial|
           precursor
          Length = 195

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -1

Query: 368 LKQSXPFCKHMSLEALCKSIIGTAKSMGIEI-VKDL*PVWL 249
           +K      +H+ LE +C+ +I T +++GI++   DL PV L
Sbjct: 125 IKSRDKALQHVPLEQICRMLIKTCRTLGIDVQYHDLDPVEL 165

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>RL11_WOLPM (P62444) 50S ribosomal protein L11|
          Length = 146

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = -1

Query: 329 EALCKSIIGTAKSMGIEIVK 270
           ++  K ++GTAKSMGIE+V+
Sbjct: 126 DSAVKMVVGTAKSMGIEVVE 145

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>GLUC_BOVIN (P01272) Glucagon precursor [Contains: Glicentin; Glicentin-related|
           polypeptide (GRPP); Oxyntomodulin (OXY) (OXM); Glucagon;
           Glucagon-like peptide 1 (GLP-1); Glucagon-like peptide
           1(7-37) (GLP-1(7-37)); Glucagon-like peptide 1(7-36)
           (GLP-1(7-3
          Length = 180

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
 Frame = +3

Query: 30  WNRGSSRGRQKLTTRPPPNGYTXEXCHMIQTDHQDGRRQISTDKSHPYLSFKSDETRLAV 209
           W R      +K ++ P P           QTD      QI+ DK H   +F SD ++  +
Sbjct: 19  WQRSLQNTEEKSSSFPAP-----------QTDPLGDPDQINEDKRHSQGTFTSDYSKY-L 66

Query: 210 DEHKIKKYA*ELVQPDRSE----ILHD-FNAHGLGRADDGLAQGLEGHVLAE 350
           D  + + +   L+   R++      HD F  H  G     ++  LEG    E
Sbjct: 67  DSRRAQDFVQWLMNTKRNKNNIAKRHDEFERHAEGTFTSDVSSYLEGQAAKE 118

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>YMF13_MARPO (P38457) Hypothetical 17.9 kDa protein in NAD1-COB intergenic|
           region (ORF 154)
          Length = 154

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 57  QKLTTRPPPNGYTXEXCHMIQTDHQDGRRQI 149
           + LT+  P + YT E  + + TD+ DGR+++
Sbjct: 91  RNLTSEDPNSTYTKEKIYELITDYHDGRQEL 121

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>RL11_MYCMS (P62437) 50S ribosomal protein L11|
          Length = 142

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = -1

Query: 335 SLEALCKSIIGTAKSMGIEI 276
           ++EA  K +IGTAK+MGI++
Sbjct: 116 TIEAAMKQVIGTAKNMGIKV 135

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>RL11_COXBU (Q83ET4) 50S ribosomal protein L11|
          Length = 145

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 365 KQSXPFCKHMSLEALCKSIIGTAKSMGIEI 276
           K   P      LEA  ++I GTA+SMGI++
Sbjct: 112 KMKTPDLTAADLEAAIRTIAGTARSMGIDV 141

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>RL11_THETN (Q8R7U2) 50S ribosomal protein L11|
          Length = 140

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -1

Query: 332 LEALCKSIIGTAKSMGIEIV 273
           +EA  + I GTA+SMGIEIV
Sbjct: 121 IEAAMRMIAGTARSMGIEIV 140

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>RL11_DESVH (P62433) 50S ribosomal protein L11|
          Length = 140

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = -1

Query: 332 LEALCKSIIGTAKSMGIEI 276
           LEA  ++I+GTA+SMGIE+
Sbjct: 121 LEAAKRNILGTARSMGIEV 139

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>GLUC_CAVPO (P05110) Glucagon precursor [Contains: Glicentin; Glicentin-related|
           polypeptide (GRPP); Oxyntomodulin (OXY) (OXM); Glucagon;
           Glucagon-like peptide 1 (GLP-1); Glucagon-like peptide
           1(7-37) (GLP-1(7-37)); Glucagon-like peptide 1(7-36)
           (GLP-1(7-3
          Length = 180

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
 Frame = +3

Query: 117 QTDHQDGRRQISTDKSHPYLSFKSDETRLAVDEHKIKKYA*EL--VQPDRSEIL--HD-F 281
           QTD  D   Q++ DK H   +F SD ++  +D  + +++   L  V+ +R+ I   HD F
Sbjct: 37  QTDMLDDPDQMNEDKRHSQGTFTSDYSKY-LDSRRAQQFLKWLLNVKRNRNNIAKRHDEF 95

Query: 282 NAHGLGRADDGLAQGLEGHVLAE 350
             H  G     ++  LEG    E
Sbjct: 96  ERHAEGTFTSDVSSYLEGQAAKE 118

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>RL11_MYCGE (P47327) 50S ribosomal protein L11|
          Length = 136

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 335 SLEALCKSIIGTAKSMGIEI 276
           ++EA  K ++GTAK MGIE+
Sbjct: 115 TVEAALKMVLGTAKQMGIEV 134

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>LIVJ_SALTY (P17215) Leu/Ile/Val/Thr-binding protein precursor (LIVT-BP)|
          Length = 365

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 228 KYA*ELVQPDRSEILHDFNAHGLGRA---DDGLAQG 326
           KY  E V+P R  I+HD   +G G A    DGL +G
Sbjct: 151 KYILEKVKPQRIAIIHDKQQYGEGLARAVQDGLKKG 186

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>GLUC_SHEEP (Q8MJ25) Glucagon precursor [Contains: Glicentin; Glicentin-related|
           polypeptide (GRPP); Oxyntomodulin (OXY) (OXM); Glucagon;
           Glucagon-like peptide 1 (GLP-1); Glucagon-like peptide
           1(7-37) (GLP-1(7-37)); Glucagon-like peptide 1(7-36)
           (GLP-1(7-3
          Length = 176

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
 Frame = +3

Query: 30  WNRGSSRGRQKLTTRPPPNGYTXEXCHMIQTDHQDGRRQISTDKSHPYLSFKSDETRLAV 209
           W        +K ++ P P           QTD      QIS DK H   +F SD ++  +
Sbjct: 19  WQHSLQNTEEKSSSFPAP-----------QTDPLGDPDQISEDKRHSQGTFTSDYSKY-L 66

Query: 210 DEHKIKKYA*ELVQPDRSE----ILHD-FNAHGLGRADDGLAQGLEGHVLAE 350
           D  + + +   L+   R++      HD F  H  G     ++  LEG    E
Sbjct: 67  DSRRAQDFVQWLMNTKRNKNNIAKRHDEFERHAEGTFTSDVSSYLEGQAAKE 118

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>RL11_SELRU (Q84IF5) 50S ribosomal protein L11|
          Length = 141

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -1

Query: 332 LEALCKSIIGTAKSMGIEIV 273
           +EA  + I GTA+SMGIEIV
Sbjct: 121 IEAATRMIEGTARSMGIEIV 140

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>REP_BUCAP (O51889) ATP-dependent DNA helicase rep (EC 3.6.1.-)|
          Length = 658

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -1

Query: 344 KHMSLEALCKSIIGTAKSMGIEIVK 270
           KH++L  + K II T  S+G+EI+K
Sbjct: 69  KHLNLLQIKKMIISTFHSLGLEIIK 93

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>LIVJ_ECOLI (P0AD96) Leu/Ile/Val-binding protein precursor (LIV-BP)|
          Length = 367

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 228 KYA*ELVQPDRSEILHDFNAHGLGRA---DDGLAQG 326
           KY  E V+P R  I+HD   +G G A    DGL +G
Sbjct: 153 KYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKKG 188

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>LIVJ_ECOL6 (P0AD97) Leu/Ile/Val-binding protein precursor (LIV-BP)|
          Length = 367

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 228 KYA*ELVQPDRSEILHDFNAHGLGRA---DDGLAQG 326
           KY  E V+P R  I+HD   +G G A    DGL +G
Sbjct: 153 KYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKKG 188

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>LIVJ_ECO57 (P0AD98) Leu/Ile/Val-binding protein precursor (LIV-BP)|
          Length = 367

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 228 KYA*ELVQPDRSEILHDFNAHGLGRA---DDGLAQG 326
           KY  E V+P R  I+HD   +G G A    DGL +G
Sbjct: 153 KYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKKG 188

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>RL11_AQUAE (O67758) 50S ribosomal protein L11|
          Length = 145

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -1

Query: 332 LEALCKSIIGTAKSMGIEI 276
           L+A  +++ GTAKSMGIEI
Sbjct: 122 LKAAMRTVAGTAKSMGIEI 140

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>RL11_TREPA (O83265) 50S ribosomal protein L11|
          Length = 146

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 353 PFCKHMSLEALCKSIIGTAKSMGIEIVKDL 264
           P    ++L+A  + I GTA+SMG+E+ + L
Sbjct: 117 PDMSALTLDAAKRIIAGTARSMGVEVERSL 146

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>GLUC_OCTDE (P22890) Glucagon precursor [Contains: Glicentin; Glicentin-related|
           polypeptide (GRPP); Oxyntomodulin (OXY) (OXM); Glucagon;
           Glucagon-like peptide 1 (GLP-1); Glucagon-like peptide
           1(7-37) (GLP-1(7-37)); Glucagon-like peptide 1(7-36)
           (GLP-1(7-3
          Length = 180

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
 Frame = +3

Query: 117 QTDHQDGRRQISTDKSHPYLSFKSDETRLAVDEHKIKKYA*EL--VQPDRSEIL--HD-F 281
           QTD  D   Q++ DK H   +F SD ++  +D  + + +   L   + +R+EI   HD F
Sbjct: 37  QTDLLDDPDQMNEDKRHSQGTFTSDYSKF-LDTRRAQDFLDWLKNTKRNRNEIAKRHDEF 95

Query: 282 NAHGLGRADDGLAQGLEGHVLAE 350
             H  G     ++  LEG    E
Sbjct: 96  ERHAEGTFTSDVSSYLEGQAAKE 118

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>RL11_LEGPL (Q5WZM3) 50S ribosomal protein L11|
          Length = 144

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 365 KQSXPFCKHMSLEALCKSIIGTAKSMGIEI 276
           K   P      L A  +SI GTA+SMGIE+
Sbjct: 111 KVKKPDLTAADLAAAVRSIAGTARSMGIEV 140

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>RL11_LEGPH (Q5ZYQ4) 50S ribosomal protein L11|
          Length = 144

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 365 KQSXPFCKHMSLEALCKSIIGTAKSMGIEI 276
           K   P      L A  +SI GTA+SMGIE+
Sbjct: 111 KVKKPDLTAADLAAAVRSIAGTARSMGIEV 140

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>RL11_LEGPA (Q5X870) 50S ribosomal protein L11|
          Length = 144

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 365 KQSXPFCKHMSLEALCKSIIGTAKSMGIEI 276
           K   P      L A  +SI GTA+SMGIE+
Sbjct: 111 KVKKPDLTAADLAAAVRSIAGTARSMGIEV 140

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>RL11_PARUW (Q6MDM5) 50S ribosomal protein L11|
          Length = 142

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -1

Query: 332 LEALCKSIIGTAKSMGIEIVKD 267
           LE     ++GTA+SMGI+++K+
Sbjct: 121 LEMATNIVLGTARSMGIDLIKE 142

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>RL11_BUCAP (Q8KA66) 50S ribosomal protein L11|
          Length = 142

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/24 (54%), Positives = 21/24 (87%)
 Frame = -1

Query: 338 MSLEALCKSIIGTAKSMGIEIVKD 267
           +++E++ +SI GTAKSMG+ IV+D
Sbjct: 120 LNIESMMRSIEGTAKSMGL-IVED 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,812,558
Number of Sequences: 219361
Number of extensions: 907102
Number of successful extensions: 2474
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2473
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result