>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 3e-24
 Identities = 88/97 (90%)
 Strand = Plus / Minus

                                                                           
Query: 337     tggtgggcgagccaaatctaagttttgcatctcactcgcaagcagagcccttctttcttt 396
               ||||||||||||||||| |||||||||||||||||| ||||| |  ||||| ||||||||
Sbjct: 5713976 tggtgggcgagccaaatttaagttttgcatctcacttgcaagaatcgccctcctttcttt 5713917

                                                    
Query: 397     caagaagttgagccggtttgtcagcttagctaatgca 433
               ||| || |||||||||||||||||||| |||||||||
Sbjct: 5713916 caaaaaattgagccggtttgtcagcttggctaatgca 5713880



 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                           
Query: 341     gggcgagccaaatctaagttttgcatctcactcgcaagcagagcccttctttctttcaag 400
               |||||||||||||||||||| ||||||||||| ||||| |  ||||||||||||||||||
Sbjct: 8265667 gggcgagccaaatctaagttctgcatctcacttgcaagaatcgcccttctttctttcaag 8265726

                                                       
Query: 401     aagttgagccggtttgtcagcttagctaatgcagttggtg 440
               || ||||| || ||||||||||| |||||||||| |||||
Sbjct: 8265727 aaattgagtcgatttgtcagcttggctaatgcagatggtg 8265766



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 486      gtccttgaagcctgtttaggctat 509
                |||||| |||||||||||||||||
Sbjct: 31008261 gtccttaaagcctgtttaggctat 31008284

>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score =  121 bits (61), Expect = 3e-24
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                          
Query: 337    tggtgggcgagccaaatctaagttttgcatctcactcgcaagcagagcccttctttcttt 396
              ||||||||||||||||| |||||||||||||||||| ||||| |  ||||| ||||||||
Sbjct: 117195 tggtgggcgagccaaatttaagttttgcatctcacttgcaagaatcgccctcctttcttt 117254

                                                   
Query: 397    caagaagttgagccggtttgtcagcttagctaatgca 433
              ||| || |||||||||||||||||||| |||||||||
Sbjct: 117255 caaaaaattgagccggtttgtcagcttggctaatgca 117291

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 3e-24
 Identities = 88/97 (90%)
 Strand = Plus / Minus

                                                                           
Query: 337     tggtgggcgagccaaatctaagttttgcatctcactcgcaagcagagcccttctttcttt 396
               ||||||||||||||||| |||||||||||||||||| ||||| |  ||||| ||||||||
Sbjct: 5713189 tggtgggcgagccaaatttaagttttgcatctcacttgcaagaatcgccctcctttcttt 5713130

                                                    
Query: 397     caagaagttgagccggtttgtcagcttagctaatgca 433
               ||| || |||||||||||||||||||| |||||||||
Sbjct: 5713129 caaaaaattgagccggtttgtcagcttggctaatgca 5713093



 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                           
Query: 341     gggcgagccaaatctaagttttgcatctcactcgcaagcagagcccttctttctttcaag 400
               |||||||||||||||||||| ||||||||||| ||||| |  ||||||||||||||||||
Sbjct: 8263502 gggcgagccaaatctaagttctgcatctcacttgcaagaatcgcccttctttctttcaag 8263561

                                                       
Query: 401     aagttgagccggtttgtcagcttagctaatgcagttggtg 440
               || ||||| || ||||||||||| |||||||||| |||||
Sbjct: 8263562 aaattgagtcgatttgtcagcttggctaatgcagatggtg 8263601



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 486      gtccttgaagcctgtttaggctat 509
                |||||| |||||||||||||||||
Sbjct: 31098784 gtccttaaagcctgtttaggctat 31098807

>dbj|AK100680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113J17, full
            insert sequence
          Length = 3348

 Score =  121 bits (61), Expect = 3e-24
 Identities = 88/97 (90%)
 Strand = Plus / Minus

                                                                        
Query: 337  tggtgggcgagccaaatctaagttttgcatctcactcgcaagcagagcccttctttcttt 396
            ||||||||||||||||| |||||||||||||||||| ||||| |  ||||| ||||||||
Sbjct: 2888 tggtgggcgagccaaatttaagttttgcatctcacttgcaagaatcgccctcctttcttt 2829

                                                 
Query: 397  caagaagttgagccggtttgtcagcttagctaatgca 433
            ||| || |||||||||||||||||||| |||||||||
Sbjct: 2828 caaaaaattgagccggtttgtcagcttggctaatgca 2792

>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11,
            complete sequence
          Length = 126040

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                        
Query: 341  gggcgagccaaatctaagttttgcatctcactcgcaagcagagcccttctttctttcaag 400
            |||||||||||||||||||| ||||||||||| ||||| |  ||||||||||||||||||
Sbjct: 2923 gggcgagccaaatctaagttctgcatctcacttgcaagaatcgcccttctttctttcaag 2982

                                                    
Query: 401  aagttgagccggtttgtcagcttagctaatgcagttggtg 440
            || ||||| || ||||||||||| |||||||||| |||||
Sbjct: 2983 aaattgagtcgatttgtcagcttggctaatgcagatggtg 3022

>gb|AC121978.2| Mus musculus BAC clone RP24-289K21 from 14, complete sequence
          Length = 168968

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 447   ccccaggttcctctgttctaat 468
             ||||||||||||||||||||||
Sbjct: 90666 ccccaggttcctctgttctaat 90687

>ref|XM_422489.1| PREDICTED: Gallus gallus similar to hypothetical protein MGC8974
           (LOC424655), mRNA
          Length = 1503

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 385 ccttctttctttcaagaagttgagc 409
           |||||||| ||||||||||||||||
Sbjct: 828 ccttctttgtttcaagaagttgagc 852

>gb|AC073115.5| Homo sapiens BAC clone RP11-571N3 from 7, complete sequence
          Length = 167331

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 284    cagtgtcaaattcccagtcct 304
              |||||||||||||||||||||
Sbjct: 117642 cagtgtcaaattcccagtcct 117622

>emb|CR353675.1| Gallus gallus finished cDNA, clone ChEST919f1
          Length = 1094

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 385 ccttctttctttcaagaagttgagc 409
           |||||||| ||||||||||||||||
Sbjct: 666 ccttctttgtttcaagaagttgagc 690

>emb|AL732486.9| Mouse DNA sequence from clone RP23-90B3 on chromosome X, complete
              sequence
          Length = 252977

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      aatgtcattatgaaaacacaa 22
              |||||||||||||||||||||
Sbjct: 229440 aatgtcattatgaaaacacaa 229460

>gb|AC150415.3| Branchiostoma floridae clone CH302-62D14, complete sequence
          Length = 147823

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   tagtccctgtggcgttgtca 218
             ||||||||||||||||||||
Sbjct: 87886 tagtccctgtggcgttgtca 87905

>gb|AC161363.7| Mus musculus BAC clone RP24-554L15 from chromosome 6, complete sequence
          Length = 209193

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ttatcatatgcatctccacc 189
             ||||||||||||||||||||
Sbjct: 98634 ttatcatatgcatctccacc 98615

>gb|AC150391.2| Branchiostoma floridae clone CH302-119J21, complete sequence
          Length = 157607

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 635    agcccaacagctgatgatcc 654
              ||||||||||||||||||||
Sbjct: 114193 agcccaacagctgatgatcc 114212

>gb|AC092560.1| Ciona savignyi, clone XX-1P8, complete sequence
          Length = 49391

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tcattatgaaaacacaataa 25
             ||||||||||||||||||||
Sbjct: 33544 tcattatgaaaacacaataa 33563

>gb|AC158138.13| Mus musculus chromosome 7, clone RP23-26C21, complete sequence
          Length = 232699

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    tttccaatgaaaatacatgt 131
              ||||||||||||||||||||
Sbjct: 140540 tttccaatgaaaatacatgt 140521

>emb|CR450685.13| Zebrafish DNA sequence from clone DKEY-83K24 in linkage group 8,
             complete sequence
          Length = 195473

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     gtcattatgaaaacacaata 24
             ||||||||||||||||||||
Sbjct: 11098 gtcattatgaaaacacaata 11079

>gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome 7, complete sequence
          Length = 211478

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    cccttctttctttcaagaag 403
              ||||||||||||||||||||
Sbjct: 171450 cccttctttctttcaagaag 171431

>ref|XM_644351.1| Entamoeba histolytica HM-1:IMSS protein kinase (302.t00003)
           partial mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 attatcatatgcatctccac 188
           ||||||||||||||||||||
Sbjct: 132 attatcatatgcatctccac 113

>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
             genomic sequence, complete sequence
          Length = 168759

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 486   gtccttgaagcctgtttaggctat 509
             |||||| |||||||||||||||||
Sbjct: 87803 gtccttaaagcctgtttaggctat 87780

>gb|AC138263.8| Mus musculus chromosome 6, clone RP23-291O5, complete sequence
          Length = 206016

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ttatcatatgcatctccacc 189
             ||||||||||||||||||||
Sbjct: 33921 ttatcatatgcatctccacc 33902

>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 451     aggttcctctgttctaatac 470
               ||||||||||||||||||||
Sbjct: 1079330 aggttcctctgttctaatac 1079349

>emb|AL807740.6| Human DNA sequence from clone RP11-203E14 on chromosome X, complete
             sequence
          Length = 166548

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   cccttctttctttcaagaag 403
             ||||||||||||||||||||
Sbjct: 18185 cccttctttctttcaagaag 18204

>gb|AC055822.10| Homo sapiens chromosome 8, clone RP11-707M3, complete sequence
          Length = 202033

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    cttagctaatgcagttggtg 440
              ||||||||||||||||||||
Sbjct: 171502 cttagctaatgcagttggtg 171483

>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 597     ccatgcctgcattgggtaac 616
               ||||||||||||||||||||
Sbjct: 4021681 ccatgcctgcattgggtaac 4021700

>emb|BX294379.5| Zebrafish DNA sequence from clone DKEY-7A20 in linkage group 1, complete
              sequence
          Length = 214290

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     gattttggtgaacactacca 100
              ||||||||||||||||||||
Sbjct: 140191 gattttggtgaacactacca 140210

>emb|AL606727.3| Zebrafish DNA sequence from clone BUSM1-79F24 in linkage group 1,
             complete sequence
          Length = 97210

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gattttggtgaacactacca 100
             ||||||||||||||||||||
Sbjct: 44545 gattttggtgaacactacca 44564

>emb|CT025857.10| Mouse DNA sequence from clone RP24-315F22 on chromosome 14, complete
             sequence
          Length = 107710

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 554   gaattctgtgcagcttgcct 573
             ||||||||||||||||||||
Sbjct: 29511 gaattctgtgcagcttgcct 29492

>dbj|AP003061.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-100P11, complete
              sequence
          Length = 176129

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    cagagcccttctttctttca 398
              ||||||||||||||||||||
Sbjct: 110377 cagagcccttctttctttca 110396

>dbj|AP003069.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-417F7, complete
             sequence
          Length = 171976

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   cagagcccttctttctttca 398
             ||||||||||||||||||||
Sbjct: 10582 cagagcccttctttctttca 10601

>gb|AC173289.2| Medicago truncatula chromosome 2 BAC clone mth2-33e9, complete sequence
          Length = 127190

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 413   tttgtcagcttagctaatgcagtt 436
             ||||||||| ||||||||||||||
Sbjct: 20943 tttgtcagcatagctaatgcagtt 20920

>emb|AL049548.6|HSDJ398G3 Human DNA sequence from clone RP3-398G3 on chromosome 6q25.1-25.3
             Contains the 3' part of the gene for a novel protein
             containing CH domains (contains KIAA1756, FLJ30878 and the
             likely ortholog of rat CPG2), four novel genes and the 5'
             part of a novel gene, complete sequence
          Length = 86478

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   cctgttgaagaagatgaatt 558
             ||||||||||||||||||||
Sbjct: 80873 cctgttgaagaagatgaatt 80892

>gb|AC123806.4| Mus musculus BAC clone RP24-152B7 from 10, complete sequence
          Length = 160167

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    tctgttctaatacttgaaaa 477
              ||||||||||||||||||||
Sbjct: 128524 tctgttctaatacttgaaaa 128505

>gb|AC122318.4| Mus musculus BAC clone RP23-306H2 from 16, complete sequence
          Length = 207909

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 558    tctgtgcagcttgccttctc 577
              ||||||||||||||||||||
Sbjct: 114244 tctgtgcagcttgccttctc 114263


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,542,524
Number of Sequences: 3902068
Number of extensions: 7542524
Number of successful extensions: 118225
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117952
Number of HSP's gapped (non-prelim): 273
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)