ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472569.1| Oryza sativa (japonica cultivar-group), predic... 262 1e-66
2dbj|AK101879.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 1e-66
3emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4,... 184 3e-43
4emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4,... 184 3e-43
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 184 3e-43
6gb|AY105923.1| Zea mays PCO122658 mRNA sequence 84 7e-13
7ref|NM_105867.2| Arabidopsis thaliana catalytic/ iron ion bindin... 78 4e-11
8gb|AF367274.1|AF367274 Arabidopsis thaliana At1g72090/F28P5_4 mR... 78 4e-11
9gb|BT002712.1| Arabidopsis thaliana At1g72090/F28P5_4 gene, comp... 78 4e-11
10gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28... 52 0.002
11gb|BT013138.1| Lycopersicon esculentum clone 114440F, mRNA sequence 48 0.039
12dbj|AK221306.1| Arabidopsis thaliana mRNA for hypothetical prote... 44 0.60
13gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 se... 44 0.60
14gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana... 44 0.60
15gb|AC135587.3| Homo sapiens 3 BAC RP11-309B5 (Roswell Park Cance... 44 0.60
16ref|XM_419622.1| PREDICTED: Gallus gallus similar to solute carr... 42 2.4
17ref|XM_467122.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.4
18gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 40 9.4
19gb|AF534640.1| Leptospira interrogans serovar pomona immunoglobu... 40 9.4
20gb|BC073249.1| Xenopus laevis MGC80594 protein, mRNA (cDNA clone... 40 9.4
21gb|AC125534.4| Mus musculus BAC clone RP23-460A22 from chromosom... 40 9.4
22gb|AF368236.1| Leptospira interrogans serovar pomona putative su... 40 9.4
23gb|AC087417.27| Mus musculus strain C57BL/6J chromosome 2 clone ... 40 9.4
24emb|AJ312486.1|ZMA312486 Zea mays Grande retrotransposon DNA, pa... 40 9.4
25gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 9.4
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
27dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
28emb|AL935130.10| Mouse DNA sequence from clone RP23-452B16 on ch... 40 9.4
29gb|AC061958.11|AC061958 Homo sapiens chromosome 3 clone RP11-6B7... 40 9.4
30dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
31dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
32dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
33dbj|AB098516.1| Leptospira interrogans serovar Manilae is2-2 gen... 40 9.4
34dbj|AK070096.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
35gb|AC110171.29| Mus musculus chromosome 12, clone RP23-400A5, co... 40 9.4
36emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 40 9.4
37gb|AC137692.4| Mus musculus BAC clone RP24-323P9 from 13, comple... 40 9.4
38emb|AL691503.6| Mouse DNA sequence from clone RP23-47N17 on chro... 40 9.4 
>ref|XM_472569.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1881

 Score =  262 bits (132), Expect = 1e-66
 Identities = 174/188 (92%)
 Strand = Plus / Minus

                                                                        
Query: 503  ttcctttactgcaatggttccttctatcacttcaccaaatacagaccatcttccgacaga 562
            ||||||| || ||| || ||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 1467 ttcctttgctacaacggatccttctatcacttcaccaaacacagaccatctcccaacaga 1408

                                                                        
Query: 563  tgtgatcttcgcatctgctgatgttcctagcatactatctggagcaatgacaagaacctg 622
            |||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| |||||
Sbjct: 1407 tgtgatcttcacatctgctgatgttcctaacatgctatcaggagcaatgacaagcacctg 1348

                                                                        
Query: 623  gatataccctttggtatgtccaaccagatgaacaccatcagtagctatttcagtgatcca 682
            |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1347 gatatatcctttggtatgtccaaccaaatgaacaccatcagtagctatttcagtgatcca 1288

                    
Query: 683  tatcctct 690
            ||||||||
Sbjct: 1287 tatcctct 1280



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 126  actgttgtggcaaaacttacggccaaaccacccca 160
            ||||| |||||||| || |||||||||||||||||
Sbjct: 1829 actgtcgtggcaaagctcacggccaaaccacccca 1795
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>dbj|AK101879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070J24, full
            insert sequence
          Length = 1961

 Score =  262 bits (132), Expect = 1e-66
 Identities = 174/188 (92%)
 Strand = Plus / Minus

                                                                        
Query: 503  ttcctttactgcaatggttccttctatcacttcaccaaatacagaccatcttccgacaga 562
            ||||||| || ||| || ||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 1452 ttcctttgctacaacggatccttctatcacttcaccaaacacagaccatctcccaacaga 1393

                                                                        
Query: 563  tgtgatcttcgcatctgctgatgttcctagcatactatctggagcaatgacaagaacctg 622
            |||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| |||||
Sbjct: 1392 tgtgatcttcacatctgctgatgttcctaacatgctatcaggagcaatgacaagcacctg 1333

                                                                        
Query: 623  gatataccctttggtatgtccaaccagatgaacaccatcagtagctatttcagtgatcca 682
            |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1332 gatatatcctttggtatgtccaaccaaatgaacaccatcagtagctatttcagtgatcca 1273

                    
Query: 683  tatcctct 690
            ||||||||
Sbjct: 1272 tatcctct 1265



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 126  actgttgtggcaaaacttacggccaaaccacccca 160
            ||||| |||||||| || |||||||||||||||||
Sbjct: 1814 actgtcgtggcaaagctcacggccaaaccacccca 1780
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>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13,
             complete sequence
          Length = 127952

 Score =  184 bits (93), Expect = 3e-43
 Identities = 132/145 (91%)
 Strand = Plus / Plus

                                                                         
Query: 503   ttcctttactgcaatggttccttctatcacttcaccaaatacagaccatcttccgacaga 562
             ||||||| || ||| || ||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 35187 ttcctttgctacaacggatccttctatcacttcaccaaacacagaccatctcccaacaga 35246

                                                                         
Query: 563   tgtgatcttcgcatctgctgatgttcctagcatactatctggagcaatgacaagaacctg 622
             |||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| |||||
Sbjct: 35247 tgtgatcttcacatctgctgatgttcctaacatgctatcaggagcaatgacaagcacctg 35306

                                      
Query: 623   gatataccctttggtatgtccaacc 647
             |||||| ||||||||||||||||||
Sbjct: 35307 gatatatcctttggtatgtccaacc 35331



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                           
Query: 645   accagatgaacaccatcagtagctatttcagtgatccatatcctct 690
             |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 35436 accaaatgaacaccatcagtagctatttcagtgatccatatcctct 35481



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 126   actgttgtggcaaaacttacggccaaaccacccca 160
             ||||| |||||||| || |||||||||||||||||
Sbjct: 34825 actgtcgtggcaaagctcacggccaaaccacccca 34859
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>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19,
              complete sequence
          Length = 156002

 Score =  184 bits (93), Expect = 3e-43
 Identities = 132/145 (91%)
 Strand = Plus / Plus

                                                                          
Query: 503    ttcctttactgcaatggttccttctatcacttcaccaaatacagaccatcttccgacaga 562
              ||||||| || ||| || ||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 122734 ttcctttgctacaacggatccttctatcacttcaccaaacacagaccatctcccaacaga 122793

                                                                          
Query: 563    tgtgatcttcgcatctgctgatgttcctagcatactatctggagcaatgacaagaacctg 622
              |||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| |||||
Sbjct: 122794 tgtgatcttcacatctgctgatgttcctaacatgctatcaggagcaatgacaagcacctg 122853

                                       
Query: 623    gatataccctttggtatgtccaacc 647
              |||||| ||||||||||||||||||
Sbjct: 122854 gatatatcctttggtatgtccaacc 122878



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                            
Query: 645    accagatgaacaccatcagtagctatttcagtgatccatatcctct 690
              |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122983 accaaatgaacaccatcagtagctatttcagtgatccatatcctct 123028



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 126    actgttgtggcaaaacttacggccaaaccacccca 160
              ||||| |||||||| || |||||||||||||||||
Sbjct: 122372 actgtcgtggcaaagctcacggccaaaccacccca 122406
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  184 bits (93), Expect = 3e-43
 Identities = 132/145 (91%)
 Strand = Plus / Plus

                                                                            
Query: 503      ttcctttactgcaatggttccttctatcacttcaccaaatacagaccatcttccgacaga 562
                ||||||| || ||| || ||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 21600645 ttcctttgctacaacggatccttctatcacttcaccaaacacagaccatctcccaacaga 21600704

                                                                            
Query: 563      tgtgatcttcgcatctgctgatgttcctagcatactatctggagcaatgacaagaacctg 622
                |||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| |||||
Sbjct: 21600705 tgtgatcttcacatctgctgatgttcctaacatgctatcaggagcaatgacaagcacctg 21600764

                                         
Query: 623      gatataccctttggtatgtccaacc 647
                |||||| ||||||||||||||||||
Sbjct: 21600765 gatatatcctttggtatgtccaacc 21600789



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                              
Query: 645      accagatgaacaccatcagtagctatttcagtgatccatatcctct 690
                |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 21600894 accaaatgaacaccatcagtagctatttcagtgatccatatcctct 21600939



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 126      actgttgtggcaaaacttacggccaaaccacccca 160
                ||||| |||||||| || |||||||||||||||||
Sbjct: 21600283 actgtcgtggcaaagctcacggccaaaccacccca 21600317
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>gb|AY105923.1| Zea mays PCO122658 mRNA sequence
          Length = 985

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 114/138 (82%)
 Strand = Plus / Minus

                                                                       
Query: 521 tccttctatcacttcaccaaatacagaccatcttccgacagatgtgatcttcgcatctgc 580
           |||||||| |||| |||| || || ||||||| ||||||||| ||||||||||| || ||
Sbjct: 629 tccttctaccactacaccgaagacggaccatcgtccgacagacgtgatcttcgcgtccgc 570

                                                                       
Query: 581 tgatgttcctagcatactatctggagcaatgacaagaacctggatataccctttggtatg 640
            || ||||| | ||| ||||| |||||| | || || |||||||| || || ||||||||
Sbjct: 569 ggacgttcccaacatgctatcaggagcagttaccagcacctggatgtatcccttggtatg 510

                             
Query: 641 tccaaccagatgaacacc 658
           ||| ||||| ||||||||
Sbjct: 509 tccgaccaggtgaacacc 492
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>ref|NM_105867.2| Arabidopsis thaliana catalytic/ iron ion binding AT1G72090 mRNA,
            complete cds
          Length = 1976

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 132/163 (80%)
 Strand = Plus / Minus

                                                                        
Query: 528  atcacttcaccaaatacagaccatcttccgacagatgtgatcttcgcatctgctgatgtt 587
            |||||||| |||||||| |||||||| || |||||||| ||| ||||    ||||| || 
Sbjct: 1502 atcacttccccaaatactgaccatctccccacagatgttatcctcgccatagctgaagtc 1443

                                                                        
Query: 588  cctagcatactatctggagcaatgacaagaacctggatataccctttggtatgtccaacc 647
            || |||||||| |||||  || | || |  ||||| | ||| || || ||||||||||||
Sbjct: 1442 ccaagcatactttctggtccagtaactaagacctgtacatatcccttcgtatgtccaacc 1383

                                                       
Query: 648  agatgaacaccatcagtagctatttcagtgatccatatcctct 690
            | |||||  ||||||||||||| |||||| |||||||||||||
Sbjct: 1382 aaatgaattccatcagtagctacttcagttatccatatcctct 1340
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>gb|AF367274.1|AF367274 Arabidopsis thaliana At1g72090/F28P5_4 mRNA, complete cds
          Length = 1977

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 132/163 (80%)
 Strand = Plus / Minus

                                                                        
Query: 528  atcacttcaccaaatacagaccatcttccgacagatgtgatcttcgcatctgctgatgtt 587
            |||||||| |||||||| |||||||| || |||||||| ||| ||||    ||||| || 
Sbjct: 1502 atcacttccccaaatactgaccatctccccacagatgttatcctcgccatagctgaagtc 1443

                                                                        
Query: 588  cctagcatactatctggagcaatgacaagaacctggatataccctttggtatgtccaacc 647
            || |||||||| |||||  || | || |  ||||| | ||| || || ||||||||||||
Sbjct: 1442 ccaagcatactttctggtccagtaactaagacctgtacatatcccttcgtatgtccaacc 1383

                                                       
Query: 648  agatgaacaccatcagtagctatttcagtgatccatatcctct 690
            | |||||  ||||||||||||| |||||| |||||||||||||
Sbjct: 1382 aaatgaattccatcagtagctacttcagttatccatatcctct 1340
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>gb|BT002712.1| Arabidopsis thaliana At1g72090/F28P5_4 gene, complete cds
          Length = 1806

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 132/163 (80%)
 Strand = Plus / Minus

                                                                        
Query: 528  atcacttcaccaaatacagaccatcttccgacagatgtgatcttcgcatctgctgatgtt 587
            |||||||| |||||||| |||||||| || |||||||| ||| ||||    ||||| || 
Sbjct: 1460 atcacttccccaaatactgaccatctccccacagatgttatcctcgccatagctgaagtc 1401

                                                                        
Query: 588  cctagcatactatctggagcaatgacaagaacctggatataccctttggtatgtccaacc 647
            || |||||||| |||||  || | || |  ||||| | ||| || || ||||||||||||
Sbjct: 1400 ccaagcatactttctggtccagtaactaagacctgtacatatcccttcgtatgtccaacc 1341

                                                       
Query: 648  agatgaacaccatcagtagctatttcagtgatccatatcctct 690
            | |||||  ||||||||||||| |||||| |||||||||||||
Sbjct: 1340 aaatgaattccatcagtagctacttcagttatccatatcctct 1298
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>gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28P5 genomic sequence, complete
             sequence
          Length = 38629

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 657   ccatcagtagctatttcagtgatccatatcctct 690
             ||||||||||||| |||||| |||||||||||||
Sbjct: 15217 ccatcagtagctacttcagttatccatatcctct 15250
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>gb|BT013138.1| Lycopersicon esculentum clone 114440F, mRNA sequence
          Length = 2084

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 639  tgtccaaccagatgaacaccatcagtagctatttcagtgatccatatcctct 690
            |||||||||| |||||| ||||| | |||||  ||||| |||||||||||||
Sbjct: 1371 tgtccaaccaaatgaaccccatctgaagctacgtcagtaatccatatcctct 1320
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>dbj|AK221306.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
           clone: RAFL25-02-C21
          Length = 506

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 46  aaacaaaaaattacagttacaa 67
           ||||||||||||||||||||||
Sbjct: 456 aaacaaaaaattacagttacaa 435
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>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence
          Length = 96183

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 46    aaacaaaaaattacagttacaa 67
             ||||||||||||||||||||||
Sbjct: 15930 aaacaaaaaattacagttacaa 15909
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>gb|AC009243.3|AC009243 Genomic sequence for Arabidopsis thaliana BAC F28K19 from chromosome I,
             complete sequence
          Length = 110565

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 46    aaacaaaaaattacagttacaa 67
             ||||||||||||||||||||||
Sbjct: 85733 aaacaaaaaattacagttacaa 85754
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>gb|AC135587.3| Homo sapiens 3 BAC RP11-309B5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 71577

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 619   cctggatataccctttggtatg 640
             ||||||||||||||||||||||
Sbjct: 12371 cctggatataccctttggtatg 12392
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>ref|XM_419622.1| PREDICTED: Gallus gallus similar to solute carrier family 22 member
           2; solute carrier family 22, member 2 (LOC421584), mRNA
          Length = 1735

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 ggcaaaacttacggccaaacc 154
           |||||||||||||||||||||
Sbjct: 535 ggcaaaacttacggccaaacc 515
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>ref|XM_467122.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2701

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 481  cagaattttgttgaagcgctgctt 504
            ||||||||||||||||| ||||||
Sbjct: 1837 cagaattttgttgaagctctgctt 1860
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 52      aaaattacagttacaaccac 71
               ||||||||||||||||||||
Sbjct: 1657566 aaaattacagttacaaccac 1657547
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>gb|AF534640.1| Leptospira interrogans serovar pomona immunoglobulin-like B protein
           gene, complete cds
          Length = 6014

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  aacaaaaaattacagttaca 66
           ||||||||||||||||||||
Sbjct: 622 aacaaaaaattacagttaca 641
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>gb|BC073249.1| Xenopus laevis MGC80594 protein, mRNA (cDNA clone MGC:80594
           IMAGE:5505839), complete cds
          Length = 1294

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 496 gcgctgcttcctttactgcaatgg 519
           ||||||||||||||| ||||||||
Sbjct: 390 gcgctgcttcctttattgcaatgg 413
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>gb|AC125534.4| Mus musculus BAC clone RP23-460A22 from chromosome 13, complete
             sequence
          Length = 181040

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 32    aatcaccatagtggaaacaaaaaa 55
             ||||||||||||||||| ||||||
Sbjct: 48093 aatcaccatagtggaaaaaaaaaa 48070
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>gb|AF368236.1| Leptospira interrogans serovar pomona putative surface protein
           gene, complete cds
          Length = 3993

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  aacaaaaaattacagttaca 66
           ||||||||||||||||||||
Sbjct: 475 aacaaaaaattacagttaca 494
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>gb|AC087417.27| Mus musculus strain C57BL/6J chromosome 2 clone rp23-382b13, complete
             sequence
          Length = 225248

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   tcaccaaatacagaccatct 553
             ||||||||||||||||||||
Sbjct: 96886 tcaccaaatacagaccatct 96905
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>emb|AJ312486.1|ZMA312486 Zea mays Grande retrotransposon DNA, partial LTR, clone W20
          Length = 449

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gctctcctggtaaccacatt 202
           ||||||||||||||||||||
Sbjct: 394 gctctcctggtaaccacatt 413
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 47      aacaaaaaattacagttaca 66
               ||||||||||||||||||||
Sbjct: 3742309 aacaaaaaattacagttaca 3742328
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 481      cagaattttgttgaagcgctgctt 504
                ||||||||||||||||| ||||||
Sbjct: 27875807 cagaattttgttgaagctctgctt 27875830
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 481      cagaattttgttgaagcgctgctt 504
                ||||||||||||||||| ||||||
Sbjct: 26532820 cagaattttgttgaagctctgctt 26532843
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>emb|AL935130.10| Mouse DNA sequence from clone RP23-452B16 on chromosome 2, complete
             sequence
          Length = 149810

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 534   tcaccaaatacagaccatct 553
             ||||||||||||||||||||
Sbjct: 23958 tcaccaaatacagaccatct 23939
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>gb|AC061958.11|AC061958 Homo sapiens chromosome 3 clone RP11-6B7, complete sequence
          Length = 177717

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    tcctgtcaatgtttagtgct 185
              ||||||||||||||||||||
Sbjct: 152523 tcctgtcaatgtttagtgct 152542
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>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0519E06
          Length = 170634

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 481   cagaattttgttgaagcgctgctt 504
             ||||||||||||||||| ||||||
Sbjct: 75201 cagaattttgttgaagctctgctt 75224
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>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0710B08
          Length = 186991

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 481    cagaattttgttgaagcgctgctt 504
              ||||||||||||||||| ||||||
Sbjct: 178316 cagaattttgttgaagctctgctt 178339
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>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0003H08
          Length = 142068

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 481   cagaattttgttgaagcgctgctt 504
             ||||||||||||||||| ||||||
Sbjct: 29730 cagaattttgttgaagctctgctt 29753
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>dbj|AB098516.1| Leptospira interrogans serovar Manilae is2-2 gene for bacterial
           immunogloblin, complete cds
          Length = 4573

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  aacaaaaaattacagttaca 66
           ||||||||||||||||||||
Sbjct: 677 aacaaaaaattacagttaca 696
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>dbj|AK070096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041N04, full
            insert sequence
          Length = 2720

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 481  cagaattttgttgaagcgctgctt 504
            ||||||||||||||||| ||||||
Sbjct: 1856 cagaattttgttgaagctctgctt 1879
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>gb|AC110171.29| Mus musculus chromosome 12, clone RP23-400A5, complete sequence
          Length = 188590

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   cactttcacttgttttccct 257
             ||||||||||||||||||||
Sbjct: 74479 cactttcacttgttttccct 74498
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 481    cagaattttgttgaagcgctgctt 504
              ||||||||||||||||| ||||||
Sbjct: 238474 cagaattttgttgaagctctgctt 238497
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>gb|AC137692.4| Mus musculus BAC clone RP24-323P9 from 13, complete sequence
          Length = 180677

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    aatcaccatagtggaaacaaaaaa 55
             ||||||||||||||||| ||||||
Sbjct: 28897 aatcaccatagtggaaaaaaaaaa 28920
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>emb|AL691503.6| Mouse DNA sequence from clone RP23-47N17 on chromosome X, complete
             sequence
          Length = 219711

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 31    aaatcaccatagtggaaacaaaaa 54
             |||||| |||||||||||||||||
Sbjct: 37904 aaatcaacatagtggaaacaaaaa 37881


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,949,374
Number of Sequences: 3902068
Number of extensions: 5949374
Number of successful extensions: 99014
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98831
Number of HSP's gapped (non-prelim): 183
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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