ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9f05 |
|---|---|
| Clone Library Name | barley_pub |
>XPP1_RAT (O54975) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 166 bits (419), Expect(2) = 2e-43 Identities = 81/155 (52%), Positives = 106/155 (68%), Gaps = 4/155 (2%) Frame = -3 Query: 679 LLTFWQEPPLWKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPG 500 LL + LW SGLDY HGTGHG+GS+LNVHEGP IS++ + + PL+A M VTDEPG Sbjct: 467 LLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFS-DEPLEAGMIVTDEPG 525 Query: 499 YYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLINTALLTPAEIEWV 320 YYEDG FGIR+ENV++V A TK+NF +G L+FE +T P QTK+I+ LT E +W+ Sbjct: 526 YYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDALTDKECDWL 585 Query: 319 NVYHSDCQKILESYLNVQEK----EWLRKATEPIT 227 N YH C+ ++ L Q + EWL + TEPI+ Sbjct: 586 NSYHQTCRDVIGKELQTQGRQEALEWLLRETEPIS 620 Score = 30.4 bits (67), Expect(2) = 2e-43 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = -1 Query: 735 KGHIAXDAAVFPNGTTG 685 KGHIA AAVFP GT G Sbjct: 449 KGHIAVSAAVFPTGTKG 465
>XPP1_MOUSE (Q6P1B1) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 164 bits (414), Expect(2) = 7e-43 Identities = 80/155 (51%), Positives = 106/155 (68%), Gaps = 4/155 (2%) Frame = -3 Query: 679 LLTFWQEPPLWKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPG 500 LL + LW SGLDY HGTGHG+GS+LNVHEGP IS++ + + PL+A M VTDEPG Sbjct: 467 LLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFS-DEPLEAGMIVTDEPG 525 Query: 499 YYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLINTALLTPAEIEWV 320 YYEDG FGIR+ENV++V A TK+NF +G L+FE +T P QTK+I+ LT E +W+ Sbjct: 526 YYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVNALTDKECDWL 585 Query: 319 NVYHSDCQKILESYLNVQEK----EWLRKATEPIT 227 N YH C+ ++ L Q + EWL + TEP++ Sbjct: 586 NSYHQTCRDVVGKELQSQGRQEALEWLIRETEPVS 620 Score = 30.4 bits (67), Expect(2) = 7e-43 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = -1 Query: 735 KGHIAXDAAVFPNGTTG 685 KGHIA AAVFP GT G Sbjct: 449 KGHIAVSAAVFPTGTKG 465
>XPP1_HUMAN (Q9NQW7) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 622 Score = 160 bits (405), Expect(2) = 7e-42 Identities = 79/155 (50%), Positives = 105/155 (67%), Gaps = 4/155 (2%) Frame = -3 Query: 679 LLTFWQEPPLWKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPG 500 LL + LW SGLDY HGTGHG+GS+LNVHEGP IS++ + + PL+A M VTDEPG Sbjct: 466 LLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFS-DEPLEAGMIVTDEPG 524 Query: 499 YYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLINTALLTPAEIEWV 320 YYEDG FGIR+ENV++V TK+NF +G L+FE +T P QTK+I+ LT E +W+ Sbjct: 525 YYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL 584 Query: 319 NVYHSDCQKILESYLNVQEK----EWLRKATEPIT 227 N YH C+ ++ L Q + EWL + T+PI+ Sbjct: 585 NNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 619 Score = 30.4 bits (67), Expect(2) = 7e-42 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = -1 Query: 735 KGHIAXDAAVFPNGTTG 685 KGHIA AAVFP GT G Sbjct: 448 KGHIAVSAAVFPTGTKG 464
>YAA1_SCHPO (Q09795) Probable peptidase C22G7.01c (EC 3.4.-.-)| Length = 598 Score = 147 bits (371), Expect(2) = 4e-37 Identities = 69/141 (48%), Positives = 95/141 (67%) Frame = -3 Query: 652 LWKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGI 473 LWK GLDY HGTGHG+GS+LNVHE P I R + PLQA M ++EPG+YEDG+FG Sbjct: 458 LWKYGLDYLHGTGHGVGSFLNVHELPVGIGSREVFNSAPLQAGMVTSNEPGFYEDGHFGY 517 Query: 472 RLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQK 293 R+EN + + E +T+ F + YL + +T AP+ KLI+ +LL+P E++++N YHS+ Sbjct: 518 RVENCVYITEVNTENRFAGRTYLGLKDLTLAPHCQKLIDPSLLSPEEVKYLNEYHSEVYT 577 Query: 292 ILESYLNVQEKEWLRKATEPI 230 L L+V K+WL K T PI Sbjct: 578 TLSPMLSVSAKKWLSKHTSPI 598 Score = 27.7 bits (60), Expect(2) = 4e-37 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -1 Query: 735 KGHIAXDAAVFPNGTTG 685 KGHIA VFP GTTG Sbjct: 431 KGHIALANIVFPKGTTG 447
>XPP_YEAST (Q07825) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9)| Length = 749 Score = 140 bits (354), Expect = 3e-33 Identities = 68/143 (47%), Positives = 94/143 (65%), Gaps = 2/143 (1%) Frame = -3 Query: 652 LWKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGI 473 LW GLDY+HGTGHGIGS+LNVHEGP + FRP N PL+A +++EPGYY+DG +GI Sbjct: 612 LWSRGLDYKHGTGHGIGSFLNVHEGPMGVGFRPHLMNFPLRAGNIISNEPGYYKDGEYGI 671 Query: 472 RLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQK 293 R+E+ +++K+A K NF L FE++T PY KLINT LL E +N YH+ + Sbjct: 672 RIESDMLIKKATEKGNF-----LKFENMTVVPYCRKLINTKLLNEEEKTQINEYHARVWR 726 Query: 292 ILESYLNVQ--EKEWLRKATEPI 230 + +L Q +WL++ T P+ Sbjct: 727 TIVHFLQPQSISYKWLKRETSPL 749
>XPP2_PIG (Q95333) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 673 Score = 120 bits (301), Expect = 4e-27 Identities = 63/147 (42%), Positives = 96/147 (65%), Gaps = 4/147 (2%) Frame = -3 Query: 652 LWKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGI 473 LW GL+Y HGTGHGIG++L VHE P + F+ N+P+ M + EPGYY+DG FGI Sbjct: 510 LWDVGLNYGHGTGHGIGNFLCVHEWP--VGFQYG--NIPMAEGMFTSIEPGYYQDGEFGI 565 Query: 472 RLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQK 293 RLE+V +V EA TK+ YL+FE ++ PY KLI+ +LL+P +++++N Y+ ++ Sbjct: 566 RLEDVALVVEAKTKY---PGTYLTFEVVSLVPYDRKLIDVSLLSPEQLQYLNRYYQAIRE 622 Query: 292 ILESYLN----VQEKEWLRKATEPITA 224 + L ++E WL++ TEP++A Sbjct: 623 KVGPELQRRGLLEELSWLQRHTEPLSA 649
>XPP2_HUMAN (O43895) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 674 Score = 120 bits (300), Expect = 6e-27 Identities = 62/147 (42%), Positives = 96/147 (65%), Gaps = 4/147 (2%) Frame = -3 Query: 652 LWKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGI 473 LW +GL+Y HGTGHGIG++L VHE P + F+ + N+ + M + EPGYY+DG FGI Sbjct: 511 LWDAGLNYGHGTGHGIGNFLCVHEWP--VGFQ--SNNIAMAKGMFTSIEPGYYKDGEFGI 566 Query: 472 RLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLINTALLTPAEIEWVNVYHSDCQK 293 RLE+V +V EA TK+ YL+FE +++ PY LI+ +LL+P ++++N Y+ ++ Sbjct: 567 RLEDVALVVEAKTKY---PGSYLTFEVVSFVPYDRNLIDVSLLSPEHLQYLNRYYQTIRE 623 Query: 292 ILESYLN----VQEKEWLRKATEPITA 224 + L ++E EWL++ TEP+ A Sbjct: 624 KVGPELQRRQLLEEFEWLQQHTEPLAA 650
>Y806_METJA (Q58216) Hypothetical peptidase MJ0806 (EC 3.4.-.-)| Length = 347 Score = 50.4 bits (119), Expect = 6e-06 Identities = 25/61 (40%), Positives = 36/61 (59%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVK 446 H GHG+G L VHE P L + ++ L+ M VT EPG Y FG+R+E++ +VK Sbjct: 275 HSLGHGVG--LEVHEEPRLSNKLKDDEDIILKEGMVVTIEPGLYLKDKFGVRIEDLYLVK 332 Query: 445 E 443 + Sbjct: 333 K 333
>PEPE_MYCTU (P65810) Probable dipeptidase pepE (EC 3.4.13.-)| Length = 375 Score = 46.2 bits (108), Expect = 1e-04 Identities = 25/61 (40%), Positives = 37/61 (60%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVK 446 H TGHGIG L VHE P++++ ++ L M + EPG Y G +G R+E+++IV Sbjct: 302 HRTGHGIG--LCVHEEPYIVA----GNDLVLVPGMAFSIEPGIYFPGRWGARIEDIVIVT 355 Query: 445 E 443 E Sbjct: 356 E 356
>PEPE_MYCBO (P65811) Probable dipeptidase pepE (EC 3.4.13.-)| Length = 375 Score = 46.2 bits (108), Expect = 1e-04 Identities = 25/61 (40%), Positives = 37/61 (60%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVK 446 H TGHGIG L VHE P++++ ++ L M + EPG Y G +G R+E+++IV Sbjct: 302 HRTGHGIG--LCVHEEPYIVA----GNDLVLVPGMAFSIEPGIYFPGRWGARIEDIVIVT 355 Query: 445 E 443 E Sbjct: 356 E 356
>YQHT_BACSU (P54518) Putative peptidase yqhT (EC 3.4.-.-)| Length = 353 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/63 (42%), Positives = 37/63 (58%) Frame = -3 Query: 631 YRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLI 452 + H TGHG+G + VHE P L S R SA L+ M VT EPG Y G+R+E+ ++ Sbjct: 281 FGHSTGHGLG--MEVHESPGL-SVRSSAI---LEPGMVVTVEPGIYIPETGGVRIEDDIV 334 Query: 451 VKE 443 + E Sbjct: 335 ITE 337
>YPDF_ECOLI (P76524) Aminopeptidase ypdF (EC 3.4.11.-)| Length = 361 Score = 44.3 bits (103), Expect = 4e-04 Identities = 26/61 (42%), Positives = 34/61 (55%) Frame = -3 Query: 631 YRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLI 452 + H TGH IG + VHE P F P LQ M +T EPG Y G G+R+E+V++ Sbjct: 286 FGHNTGHAIG--IEVHEDPR---FSPRDTTT-LQPGMLLTVEPGIYLPGQGGVRIEDVVL 339 Query: 451 V 449 V Sbjct: 340 V 340
>AMPP_MYCPN (P75313) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P) (APP) (Aminoacylproline aminopeptidase) Length = 354 Score = 42.4 bits (98), Expect = 0.002 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVK 446 H TGHG+G L++HE P++ ++ N L + +T EPG Y GIR+E++++VK Sbjct: 286 HSTGHGVG--LDIHEMPNV----STSYNKLLCENAVITIEPGIYIPSVGGIRIEDMVLVK 339 Query: 445 E 443 + Sbjct: 340 D 340
>PEPQ_PYRHO (O58885) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 351 Score = 41.2 bits (95), Expect = 0.003 Identities = 21/67 (31%), Positives = 36/67 (53%) Frame = -3 Query: 631 YRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLI 452 + H GHG+G L VHE P + + + L+ M +T EPG Y G+R+E+ ++ Sbjct: 281 FNHSLGHGVG--LEVHEWPRVSQYDETV----LREGMVITIEPGIYIPKIGGVRIEDTIL 334 Query: 451 VKEADTK 431 + + +K Sbjct: 335 ITKNGSK 341
>PEPQ_PYRFU (P81535) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 348 Score = 40.8 bits (94), Expect = 0.004 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVK 446 H GHG+G L +HE P + + + L+ M +T EPG Y G+R+E+ +++ Sbjct: 280 HSLGHGVG--LEIHEWPRISQYDETV----LKEGMVITIEPGIYIPKLGGVRIEDTVLIT 333 Query: 445 EADTK 431 E K Sbjct: 334 ENGAK 338
>AMPP_MYCGE (P47566) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P) (APP) (Aminoacylproline aminopeptidase) Length = 354 Score = 40.4 bits (93), Expect = 0.006 Identities = 23/61 (37%), Positives = 37/61 (60%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVK 446 H TGHG+G +++HE P++ + N L + VT EPG Y GIR+E++++VK Sbjct: 286 HSTGHGVG--IDIHEMPNV----SQSYNKLLCENGVVTIEPGIYIPNLGGIRIEDMVLVK 339 Query: 445 E 443 + Sbjct: 340 K 340
>YOD1_SCHPO (Q9UUD8) Probable peptidase C18A7.01 (EC 3.4.-.-)| Length = 451 Score = 39.3 bits (90), Expect = 0.013 Identities = 21/61 (34%), Positives = 31/61 (50%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVK 446 H GHG+G L HE +L P+ + P+Q T EPG Y GIR+E+ ++ Sbjct: 380 HRLGHGLG--LEEHEQTYL---NPANKGTPVQKGNVFTVEPGIYIPDEIGIRIEDAVLAS 434 Query: 445 E 443 + Sbjct: 435 D 435
>PEPQ_LACHE (O84913) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 368 Score = 39.3 bits (90), Expect = 0.013 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENV-LIV 449 H GHGIG NVHE P ++ ++ L+ M + EPG Y G G+R+E+ ++ Sbjct: 294 HRLGHGIGK--NVHEYPSIVQ----GNDLVLEEGMCFSIEPGIYIPGFAGVRIEDCGVVT 347 Query: 448 KEADTKFNFGEK 413 K+ F +K Sbjct: 348 KDGFKTFTHTDK 359
>PEPQ_LACDE (Q9S6S1) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 368 Score = 37.7 bits (86), Expect = 0.037 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENV-LIV 449 H GHGIG + VHE P + + +V L+ M + EPG Y G G+R+E+ ++ Sbjct: 294 HRLGHGIG--MEVHEFPSIAN----GNDVVLEEGMCFSIEPGIYIPGFAGVRIEDCGVLT 347 Query: 448 KEADTKFNFGEK 413 KE F K Sbjct: 348 KEGFKPFTHTSK 359
>PEPQ_LACDL (P46545) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 368 Score = 36.6 bits (83), Expect = 0.083 Identities = 21/55 (38%), Positives = 30/55 (54%) Frame = -3 Query: 625 HGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLEN 461 H GHGIG + VHE P + + +V L+ M + EPG Y G G+R+E+ Sbjct: 294 HRLGHGIG--MEVHEFPSIAN----GNDVVLEEGMCFSIEPGIYIPGFAGVRIED 342
>AMPM_BUCAI (P57324) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 264 Score = 34.7 bits (78), Expect = 0.31 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = -3 Query: 616 GHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEP 503 GHGIG N HE PH++ ++ N+ L+ M T EP Sbjct: 170 GHGIGR--NFHEEPHVLHYKNKKNNIILKKGMIFTIEP 205
>YEQ8_YEAST (P40051) Hypothetical 58.0 kDa peptidase in PTP3-ILV1 intergenic| region (EC 3.4.-.-) Length = 511 Score = 34.3 bits (77), Expect = 0.41 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%) Frame = -3 Query: 649 WKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDG----- 485 W Y H GH +G L+VH+ P + +R PL+ +T EPG Y Sbjct: 405 WNVEKLYPHYIGHNLG--LDVHDVPKV------SRYEPLKVGQVITIEPGLYIPNEESFP 456 Query: 484 ----NFGIRLENVLIVKEADTKFN 425 N GIR+E+ + + E DT N Sbjct: 457 SYFRNVGIRIEDDIAIGE-DTYTN 479
>TRI56_MOUSE (Q80VI1) Tripartite motif protein 56| Length = 734 Score = 33.1 bits (74), Expect = 0.91 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -2 Query: 365 TYKHRLVDPCGDRMGKRVPLRLPENLGVLPKCSGEGMAEEGH*TYNCEQLSQLLHGYCCC 186 T+KHR+VD G R G P+ GE + + C+ SQLL C Sbjct: 141 THKHRVVDLVGYRAGWYDEEARERQASQCPQHPGEALC------FLCQPCSQLLCKDCRL 194 Query: 185 APNIDR-CLP 159 P+ID CLP Sbjct: 195 GPHIDHPCLP 204
>FET3_CANAL (P78591) Iron transport multicopper oxidase FET3 precursor (EC| 1.-.-.-) Length = 624 Score = 31.6 bits (70), Expect = 2.7 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 8/89 (8%) Frame = -3 Query: 643 SGLDYRHGTGHGIGSYL---NVHEGPHLISFRPSARNVPLQASMTVTDEPGYY-----ED 488 +G D + T H G ++ N +GP +++ P + TVTD+ G Y Sbjct: 71 NGFDNLNTTLHFHGLFVRGANQMDGPEMVTQCPIPPGETYLYNFTVTDQVGTYWYHSHTG 130 Query: 487 GNFGIRLENVLIVKEADTKFNFGEKGYLS 401 G +G + V I+++ D +++ E+ L+ Sbjct: 131 GQYGDGMRGVFIIEDDDFPYHYDEEVVLT 159
>YFH6_YEAST (P43590) Hypothetical 61.8 kDa peptidase in MPR1-GCN20 intergenic| region (EC 3.4.-.-) Length = 535 Score = 31.2 bits (69), Expect = 3.5 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 7/53 (13%) Frame = -3 Query: 631 YRHGTGHGIGSYLNVHE---GPHLISFRPSARNV----PLQASMTVTDEPGYY 494 Y HG GH +G L+VH+ P+ P R + PL+ +M +T+EPG Y Sbjct: 406 YPHGLGHMLG--LDVHDVGGNPNYDDPDPMFRYLRIRRPLKENMVITNEPGCY 456
>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) Length = 915 Score = 31.2 bits (69), Expect = 3.5 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +1 Query: 247 SSAIPSPEHLGKTPRFSGSRSGTRLPIRSPQG 342 SSA PS + L P FSG+R+G P+ P G Sbjct: 341 SSAKPSSDLLDLQPDFSGARAGAAAPVPPPTG 372
>DXR_AGRT5 (Q8UC86) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 397 Score = 30.0 bits (66), Expect = 7.7 Identities = 22/92 (23%), Positives = 37/92 (40%) Frame = -3 Query: 655 PLWKSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYEDGNFG 476 P W GL G+ L + E +L RP +V + + G Y DG++ Sbjct: 206 PNWSMGLKVSIGSASMFNKGLEMIEAKYLFDLRPDQVDVIVHPQSIIHSMVG-YTDGSYI 264 Query: 475 IRLENVLIVKEADTKFNFGEKGYLSFEHITWA 380 +L + + + E+G LS E + +A Sbjct: 265 AQLGSPDMRTAISYALTYPERGNLSVERLDFA 296 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 110,517,781 Number of Sequences: 219361 Number of extensions: 2408806 Number of successful extensions: 5644 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 5409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5622 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7649585595 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
