>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  167 bits (424), Expect(3) = 1e-92
 Identities = 82/83 (98%), Positives = 83/83 (100%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD
Sbjct: 345 DEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 404

Query: 329 TYMSQAALGDANQDAMKTGSFYG 261
           TYMSQAALGDANQDAMKTGSFYG
Sbjct: 405 TYMSQAALGDANQDAMKTGSFYG 427



 Score =  128 bits (321), Expect(3) = 1e-92
 Identities = 60/61 (98%), Positives = 61/61 (100%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD
Sbjct: 285 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 344

Query: 510 E 508
           +
Sbjct: 345 D 345



 Score = 86.3 bits (212), Expect(3) = 1e-92
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -3

Query: 213 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 100
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  130 bits (327), Expect(3) = 2e-72
 Identities = 60/83 (72%), Positives = 73/83 (87%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD
Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLAD 414

Query: 329 TYMSQAALGDANQDAMKTGSFYG 261
            YMS+AALGDAN DA+K G+FYG
Sbjct: 415 KYMSEAALGDANNDAIKRGTFYG 437



 Score =  117 bits (293), Expect(3) = 2e-72
 Identities = 52/61 (85%), Positives = 59/61 (96%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY 
Sbjct: 295 IRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYH 354

Query: 510 E 508
           +
Sbjct: 355 D 355



 Score = 66.6 bits (161), Expect(3) = 2e-72
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -3

Query: 216 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 100
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  127 bits (318), Expect(3) = 1e-70
 Identities = 61/83 (73%), Positives = 73/83 (87%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+
Sbjct: 355 DEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAE 414

Query: 329 TYMSQAALGDANQDAMKTGSFYG 261
           TY+SQAALGDAN DA+  G+FYG
Sbjct: 415 TYLSQAALGDANADAIGRGTFYG 437



 Score =  113 bits (283), Expect(3) = 1e-70
 Identities = 50/61 (81%), Positives = 56/61 (91%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYD
Sbjct: 295 IRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYD 354

Query: 510 E 508
           +
Sbjct: 355 D 355



 Score = 67.8 bits (164), Expect(3) = 1e-70
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 213 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 100
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  131 bits (330), Expect(3) = 3e-69
 Identities = 59/83 (71%), Positives = 75/83 (90%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD
Sbjct: 353 DEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLAD 412

Query: 329 TYMSQAALGDANQDAMKTGSFYG 261
            YMS AALGDAN+DA+  G+F+G
Sbjct: 413 QYMSSAALGDANKDAIDRGTFFG 435



 Score =  108 bits (269), Expect(3) = 3e-69
 Identities = 50/61 (81%), Positives = 54/61 (88%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY 
Sbjct: 293 IRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYH 352

Query: 510 E 508
           +
Sbjct: 353 D 353



 Score = 63.9 bits (154), Expect(3) = 3e-69
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -3

Query: 213 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 106
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  142 bits (359), Expect(2) = 1e-63
 Identities = 66/83 (79%), Positives = 77/83 (92%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+
Sbjct: 345 DEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAE 404

Query: 329 TYMSQAALGDANQDAMKTGSFYG 261
            Y+S+AALGDAN DAMKTGSFYG
Sbjct: 405 QYLSEAALGDANSDAMKTGSFYG 427



 Score =  120 bits (302), Expect(2) = 1e-63
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYD
Sbjct: 285 IRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYD 344

Query: 510 E 508
           +
Sbjct: 345 D 345

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  143 bits (361), Expect(2) = 1e-63
 Identities = 66/83 (79%), Positives = 76/83 (91%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD
Sbjct: 342 DEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLAD 401

Query: 329 TYMSQAALGDANQDAMKTGSFYG 261
            Y+S+AALG AN DAMKTG+FYG
Sbjct: 402 KYLSEAALGQANDDAMKTGAFYG 424



 Score =  120 bits (300), Expect(2) = 1e-63
 Identities = 54/61 (88%), Positives = 60/61 (98%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYD
Sbjct: 282 IRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYD 341

Query: 510 E 508
           +
Sbjct: 342 D 342

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  137 bits (344), Expect(2) = 7e-60
 Identities = 62/83 (74%), Positives = 76/83 (91%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD
Sbjct: 355 DEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 414

Query: 329 TYMSQAALGDANQDAMKTGSFYG 261
            Y+S+AALGDAN DAM TG+FYG
Sbjct: 415 KYLSEAALGDANSDAMNTGTFYG 437



 Score =  114 bits (284), Expect(2) = 7e-60
 Identities = 51/61 (83%), Positives = 58/61 (95%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYD
Sbjct: 295 IRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYD 354

Query: 510 E 508
           +
Sbjct: 355 D 355

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  134 bits (338), Expect(2) = 1e-59
 Identities = 60/82 (73%), Positives = 76/82 (92%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD
Sbjct: 351 DEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLAD 410

Query: 329 TYMSQAALGDANQDAMKTGSFY 264
            Y+++AALG+AN+DAMKTGSF+
Sbjct: 411 KYLNEAALGEANEDAMKTGSFF 432



 Score =  115 bits (288), Expect(2) = 1e-59
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYD
Sbjct: 291 IRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYD 350

Query: 510 E 508
           +
Sbjct: 351 D 351

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  129 bits (324), Expect(2) = 2e-59
 Identities = 62/81 (76%), Positives = 72/81 (88%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+
Sbjct: 359 DEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAE 418

Query: 329 TYMSQAALGDANQDAMKTGSF 267
           TY+ +AALGDAN DA+ TG+F
Sbjct: 419 TYLKEAALGDANADAINTGNF 439



 Score =  120 bits (300), Expect(2) = 2e-59
 Identities = 54/61 (88%), Positives = 60/61 (98%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYD
Sbjct: 299 IRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYD 358

Query: 510 E 508
           +
Sbjct: 359 D 359

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  129 bits (323), Expect(2) = 6e-59
 Identities = 61/79 (77%), Positives = 72/79 (91%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+
Sbjct: 354 DEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAE 413

Query: 329 TYMSQAALGDANQDAMKTG 273
           TY+ +AALGDAN DA+ TG
Sbjct: 414 TYLKEAALGDANADAINTG 432



 Score =  119 bits (297), Expect(2) = 6e-59
 Identities = 54/61 (88%), Positives = 60/61 (98%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYD
Sbjct: 294 IRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYD 353

Query: 510 E 508
           +
Sbjct: 354 D 354

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  130 bits (327), Expect(2) = 8e-59
 Identities = 59/81 (72%), Positives = 74/81 (91%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD
Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLAD 414

Query: 329 TYMSQAALGDANQDAMKTGSF 267
            YMS+AALGDANQDA+K G+F
Sbjct: 415 KYMSEAALGDANQDAIKRGTF 435



 Score =  117 bits (292), Expect(2) = 8e-59
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYD
Sbjct: 295 IRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYD 354

Query: 510 E 508
           +
Sbjct: 355 D 355

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  129 bits (324), Expect(2) = 1e-57
 Identities = 61/82 (74%), Positives = 71/82 (86%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD
Sbjct: 359 DEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 418

Query: 329 TYMSQAALGDANQDAMKTGSFY 264
            Y+ +AALGDAN DA+  GSF+
Sbjct: 419 KYLKEAALGDANADAINNGSFF 440



 Score =  114 bits (285), Expect(2) = 1e-57
 Identities = 53/61 (86%), Positives = 56/61 (91%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYD
Sbjct: 299 IRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYD 358

Query: 510 E 508
           +
Sbjct: 359 D 359

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  122 bits (307), Expect(2) = 3e-56
 Identities = 53/82 (64%), Positives = 75/82 (91%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD
Sbjct: 357 DEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLAD 416

Query: 329 TYMSQAALGDANQDAMKTGSFY 264
            Y+++AALG+AN+DA+K+GSF+
Sbjct: 417 KYLNEAALGNANEDAIKSGSFF 438



 Score =  116 bits (290), Expect(2) = 3e-56
 Identities = 51/61 (83%), Positives = 57/61 (93%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYD
Sbjct: 297 IRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYD 356

Query: 510 E 508
           +
Sbjct: 357 D 357

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  122 bits (305), Expect(2) = 1e-53
 Identities = 53/82 (64%), Positives = 74/82 (90%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 330
           +EVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD
Sbjct: 359 DEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLAD 418

Query: 329 TYMSQAALGDANQDAMKTGSFY 264
            Y+++AALG+AN+DA+K+GSF+
Sbjct: 419 QYLNEAALGNANEDAIKSGSFF 440



 Score =  108 bits (270), Expect(2) = 1e-53
 Identities = 48/61 (78%), Positives = 56/61 (91%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYD
Sbjct: 299 IRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYD 358

Query: 510 E 508
           +
Sbjct: 359 D 359

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  105 bits (262), Expect(2) = 3e-36
 Identities = 48/61 (78%), Positives = 52/61 (85%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYD
Sbjct: 268 IRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYD 327

Query: 510 E 508
           +
Sbjct: 328 D 328



 Score = 66.6 bits (161), Expect(2) = 3e-36
 Identities = 33/66 (50%), Positives = 46/66 (69%)
 Frame = -1

Query: 503 VRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 324
           VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y
Sbjct: 330 VRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAY 388

Query: 323 MSQAAL 306
           +S A L
Sbjct: 389 LSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 90.1 bits (222), Expect(2) = 2e-27
 Identities = 39/61 (63%), Positives = 48/61 (78%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD
Sbjct: 168 IRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYD 227

Query: 510 E 508
           E
Sbjct: 228 E 228



 Score = 52.4 bits (124), Expect(2) = 2e-27
 Identities = 22/61 (36%), Positives = 37/61 (60%)
 Frame = -1

Query: 506 EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADT 327
           ++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D 
Sbjct: 229 QIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDE 288

Query: 326 Y 324
           Y
Sbjct: 289 Y 289

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  111 bits (277), Expect = 2e-24
 Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 6/85 (7%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYD
Sbjct: 292 IRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYD 351

Query: 510 E------*GAQVGRLYRNREHWQEA 454
           +       G  V R+ RN  + +E+
Sbjct: 352 DEVRKWAVGVGVERIGRNLVNSKES 376



 Score = 87.4 bits (215), Expect = 4e-17
 Identities = 39/58 (67%), Positives = 49/58 (84%)
 Frame = -1

Query: 509 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 336
           +EVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 352 DEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 89.4 bits (220), Expect = 1e-17
 Identities = 38/60 (63%), Positives = 47/60 (78%)
 Frame = -3

Query: 690 IRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYD 511
           IRDGRMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD
Sbjct: 168 IRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYD 227

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 37.7 bits (86), Expect(2) = 2e-05
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = -3

Query: 576 IVDTFPGQSIDFFGALR 526
           +VDTFPGQSIDFFGALR
Sbjct: 1   LVDTFPGQSIDFFGALR 17



 Score = 30.8 bits (68), Expect(2) = 2e-05
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 443 RDGPVTFEQPKMTVEK 396
           R+GP TFEQP MT+EK
Sbjct: 17  REGPPTFEQPAMTIEK 32

>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (eIF3g)
          Length = 320

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 26/100 (26%), Positives = 39/100 (39%)
 Frame = +1

Query: 337 SCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVTGPSREFTSLLPMFSIPVEPTHLRTSFVV 516
           SC R+     WT+ CPY  +   +    ++  G S      LP    PV+ T  +T   V
Sbjct: 156 SC-RICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYV 214

Query: 517 HPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLEDTLADTD 636
            PS +      G S +     DD     +  L +   +TD
Sbjct: 215 PPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETD 254

>Y778_AQUAE (O66974) Hypothetical UPF0052 protein aq_778|
          Length = 328

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +1

Query: 427 VTGPSREFTSLLPMFSIP-----VEPTHLRTSFVVHPSTQSTEKVNGLSWEGVD 573
           + GP   FTS+LP F +P     V+ +     FVV+  TQ  E  N  +W+ +D
Sbjct: 188 IIGPGSLFTSILPNFLVPQIREAVKESRALKVFVVNVMTQPGETDNFTAWDHID 241

>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (Eif3p42) (eIF3g)
          Length = 320

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 25/100 (25%), Positives = 38/100 (38%)
 Frame = +1

Query: 337 SCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVTGPSREFTSLLPMFSIPVEPTHLRTSFVV 516
           SC R+     WT+ CPY  +   +    ++  G S      LP    PV+    +T   V
Sbjct: 156 SC-RICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQAAQSKTGKYV 214

Query: 517 HPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLEDTLADTD 636
            PS +      G S +     DD     +  L +   +TD
Sbjct: 215 PPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETD 254

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -1

Query: 431 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 276
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 275 GSFYG*KILHTHPPSLAA 222
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
 Frame = -1

Query: 539 SVLCVLGCTTNEVR-----KWVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 387
           S L VL  T N  R      W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 202 SSLQVLRLTENPWRCDCALHWLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 328 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 432
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>TAL_AQUAE (O66520) Probable transaldolase (EC 2.2.1.2)|
          Length = 217

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -1

Query: 521 GCTTNEVRKWVGSTG--IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 351
           G TTN     +  TG   + + K ++   DGPV+ E   +  E ++  G ML +  +NV
Sbjct: 24  GVTTNPTL--ISKTGRPFKEVVKEILELVDGPVSLETVSLDAEGMIREGRMLAELGENV 80

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -1

Query: 431 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 276
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 275 GSFYG*KILHTHPPSLAA 222
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,085,911
Number of Sequences: 219361
Number of extensions: 2023150
Number of successful extensions: 6278
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6275
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)