ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9f04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1281 bits (646), Expect = 0.0 Identities = 687/694 (98%), Gaps = 5/694 (0%) Strand = Plus / Minus Query: 3 tatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1684 tatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 1625 Query: 63 -gtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1624 tgtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 1565 Query: 122 t-cgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 180 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1564 ttcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 1505 Query: 181 ca-cgggcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgg 239 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1504 catcgggcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgg 1445 Query: 240 gtgt-gtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 298 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1444 gtgttgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 1385 Query: 299 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1384 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 1325 Query: 359 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1324 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 1265 Query: 419 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 1205 Query: 479 cggtagagccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccg 538 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1204 cggtagagccgacccacttgcgcacctca-tcgtcgtacacccgagcacgcagagcaccg 1146 Query: 539 aaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactg 598 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1145 aaaaagtcaatggattgtcctgggaaggtgtcgacgatctttacgacagactcgtcacag 1086 Query: 599 acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 1026 Query: 659 cagtagaacttctccatacgaccatcacggatca 692 |||||||||||||||||||||||||||||||||| Sbjct: 1025 cagtagaacttctccatacgaccatcacggatca 992
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 1053 bits (531), Expect = 0.0 Identities = 651/687 (94%), Gaps = 8/687 (1%) Strand = Plus / Minus Query: 12 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 65 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 746 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 687 Query: 66 ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 125 | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 686 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 628 Query: 126 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 185 | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || | Sbjct: 627 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 568 Query: 186 gcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgt 245 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 567 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 508 Query: 246 atggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacc 305 ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 507 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 448 Query: 306 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 388 Query: 366 ctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 425 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 387 ctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaa 328 Query: 426 ggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtaga 485 |||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 327 ggtcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtaga 268 Query: 486 gccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagt 545 | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 267 ggtcacccacttgcgcacctc-gtcgtcgtacacccgagcacgcagagcaccgaaaaagt 209 Query: 546 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 605 | |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 208 cgatggattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgt 149 Query: 606 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 665 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 148 cggtctggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagtaga 89 Query: 666 acttctccatacgaccatcacggatca 692 ||||||||||||||||||||||||||| Sbjct: 88 acttctccatacgaccatcacggatca 62
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 1053 bits (531), Expect = 0.0 Identities = 651/687 (94%), Gaps = 8/687 (1%) Strand = Plus / Minus Query: 12 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 65 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537 Query: 66 ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 125 | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478 Query: 126 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 185 | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || | Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418 Query: 186 gcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgt 245 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1417 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 1358 Query: 246 atggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacc 305 ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1357 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 1298 Query: 306 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 1238 Query: 366 ctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 425 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1237 ctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaa 1178 Query: 426 ggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtaga 485 |||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1177 ggtcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtaga 1118 Query: 486 gccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagt 545 | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1117 ggtcacccacttgcgcacctc-gtcgtcgtacacccgagcacgcagagcaccgaaaaagt 1059 Query: 546 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 605 | |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1058 cgatggattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgt 999 Query: 606 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 665 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 998 cggtctggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagtaga 939 Query: 666 acttctccatacgaccatcacggatca 692 ||||||||||||||||||||||||||| Sbjct: 938 acttctccatacgaccatcacggatca 912
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 825 bits (416), Expect = 0.0 Identities = 429/432 (99%), Gaps = 1/432 (0%) Strand = Plus / Minus Query: 261 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1167 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1108 Query: 321 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1107 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1048 Query: 381 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1047 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 988 Query: 441 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 928 Query: 501 cacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctg 560 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 cacctca-tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctg 869 Query: 561 ggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatac 620 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 868 ggaaggtgtcgacgatctttacgacagactcgtcacagacattgtcggtctggaagatac 809 Query: 621 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 749 Query: 681 catcacggatca 692 |||||||||||| Sbjct: 748 catcacggatca 737 Score = 422 bits (213), Expect = e-115 Identities = 213/213 (100%) Strand = Plus / Minus Query: 1 tatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggactt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 tatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggactt 1318 Query: 61 aggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 aggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgcc 1258 Query: 121 gtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 gtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 1198 Query: 181 cacgggcaaagtaccttgctgtgctcctttacc 213 ||||||||||||||||||||||||||||||||| Sbjct: 1197 cacgggcaaagtaccttgctgtgctcctttacc 1165
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 805 bits (406), Expect = 0.0 Identities = 609/672 (90%), Gaps = 10/672 (1%) Strand = Plus / Minus Query: 26 catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 79 ||||||||||| ||||||| ||||||||||| |||||||| || |||||||||| Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534 Query: 80 -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 138 || | |||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474 Query: 139 tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 198 ||||||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||| Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414 Query: 199 ctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtatggagaattttc 258 |||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||| Sbjct: 1413 ttgtgctcctttacctcctcctatgcagcaagagatggtgggtgt--atgaagagtgttc 1356 Query: 259 taaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 318 |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| Sbjct: 1355 taaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctgg 1296 Query: 319 ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatg 378 |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1295 ctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatg 1236 Query: 379 tgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccg 438 || |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 1235 tggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccg 1176 Query: 439 tcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttg 498 |||||||||||||||||||||||||| |||||||| |||||||| || ||||||||| Sbjct: 1175 tcccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttg 1116 Query: 499 cgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcc 558 ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1115 cgcacctca-acgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcc 1057 Query: 559 tgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagat 618 |||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1056 tgggaangtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaagat 997 Query: 619 acccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacg 678 |||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 996 acccttgcagacgccgatacggtcctcgcgggtgggcgcccagtagaacttctccatacg 937 Query: 679 accatcacggat 690 ||| |||||||| Sbjct: 936 accgtcacggat 925
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 650 bits (328), Expect = 0.0 Identities = 335/336 (99%), Gaps = 1/336 (0%) Strand = Plus / Minus Query: 211 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7355 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 7296 Query: 271 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7295 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 7236 Query: 331 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7235 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 7176 Query: 391 agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7175 agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 7116 Query: 451 accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcattc 510 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 7115 accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctca-tc 7057 Query: 511 gtcgtacacccgagcacgcagagcaccgaaaaagtc 546 |||||||||||||||||||||||||||||||||||| Sbjct: 7056 gtcgtacacccgagcacgcagagcaccgaaaaagtc 7021 Score = 426 bits (215), Expect = e-116 Identities = 215/215 (100%) Strand = Plus / Minus Query: 1 tatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggactt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7737 tatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggactt 7678 Query: 61 aggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7677 aggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgcc 7618 Query: 121 gtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7617 gtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 7558 Query: 181 cacgggcaaagtaccttgctgtgctcctttacctc 215 ||||||||||||||||||||||||||||||||||| Sbjct: 7557 cacgggcaaagtaccttgctgtgctcctttacctc 7523 Score = 291 bits (147), Expect = 2e-75 Identities = 147/147 (100%) Strand = Plus / Minus Query: 546 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6880 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 6821 Query: 606 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6820 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 6761 Query: 666 acttctccatacgaccatcacggatca 692 ||||||||||||||||||||||||||| Sbjct: 6760 acttctccatacgaccatcacggatca 6734 Score = 125 bits (63), Expect = 2e-25 Identities = 172/207 (83%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 486 gccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagt 545 ||||||||||||||||||||| | ||||||||||||| || ||||| || ||||| |||| Sbjct: 3812 gccgacccacttgcgcacctcgt-cgtcgtacacccgtgcccgcagcgcgccgaagaagt 3754 Query: 546 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 605 | ||||| || || ||||||||||| || | | | || || | |||||| ||| |||| Sbjct: 3753 cgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgt 3694 Query: 606 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 665 |||| ||||||| |||||||| || ||||| ||||| || |||||||| |||||||||| Sbjct: 3693 cggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtaga 3634 Query: 666 acttctccatacgaccatcacggatca 692 |||||||||| || || |||||||||| Sbjct: 3633 acttctccatgcgcccgtcacggatca 3607 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 337 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 396 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902 Query: 397 ttctcgactgtcatctttggctgctcgaa 425 ||||| | |||||||| ||||| ||||| Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 565 bits (285), Expect = e-158 Identities = 388/421 (92%), Gaps = 1/421 (0%) Strand = Plus / Minus Query: 261 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 320 |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| Sbjct: 1363 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1304 Query: 321 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 380 |||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1303 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1244 Query: 381 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 440 |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| ||||| Sbjct: 1243 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1184 Query: 441 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 500 |||||||||||||||||||||||| |||||||| |||||||| || ||||||||||| Sbjct: 1183 ccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttgcg 1124 Query: 501 cacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctg 560 |||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 1123 cacctc-gtcgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcctg 1065 Query: 561 ggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatac 620 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 1064 ggaaggtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaagatac 1005 Query: 621 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 680 |||||||||| ||||||||||| || |||||||| |||||||| |||||||||||||||| Sbjct: 1004 ccttgcagacgccgatacggtcctcgcgggtgggcgcccagtaaaacttctccatacgac 945 Query: 681 c 681 | Sbjct: 944 c 944 Score = 176 bits (89), Expect = 6e-41 Identities = 119/129 (92%) Strand = Plus / Minus Query: 85 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 144 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430 Query: 145 gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 204 | |||||||||||| ||||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370 Query: 205 tcctttacc 213 ||||||||| Sbjct: 1369 tcctttacc 1361
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 507 bits (256), Expect = e-140 Identities = 296/308 (96%), Gaps = 1/308 (0%) Strand = Plus / Minus Query: 239 ggtgtgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 298 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 ggtgtgtatggagaatgttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 249 Query: 299 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 189 Query: 359 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 129 Query: 419 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 478 |||| |||||||| || ||||||||||||||||| ||| ||||||||||||||||||| | Sbjct: 128 gctcaaaggtcactggtccgtcccgcgagttcacaagcttcttgccaatgttctcgatac 69 Query: 479 cggtagagccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccg 538 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 68 cggtagaggtcacccacttgcgcacctc-gtcgtcgtacacccgagcacgcagagcaccg 10 Query: 539 aaaaagtc 546 |||||||| Sbjct: 9 aaaaagtc 2
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 1086 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1028 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1027 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 968 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 967 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 908 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 907 ctccatacgcccgtcacggat 887 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||||||||||||||||||| |||| Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 260 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 319 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1316 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1257 Query: 320 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 379 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1256 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1197 Query: 380 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 439 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1196 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1137 Query: 440 cccgcgagttcaccagcctcttgccaatgttctc 473 ||| |||||||||||||||||||||||||||||| Sbjct: 1136 ccctcgagttcaccagcctcttgccaatgttctc 1103
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 1081 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1023 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1022 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 963 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 962 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 903 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 902 ctccatacgcccgtcacggat 882 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||||||||||||||||||| |||| Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Minus Query: 262 ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 321 ||||||||||||||||||||||| || || |||||| ||||| ||||| |||| |||| Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250 Query: 322 atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 381 | ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190 Query: 382 ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 441 |||||||| | ||||| |||| |||||||| ||||||||||| | || || ||| Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130 Query: 442 cgcgagttcaccagcctcttgccaatgttctc 473 | |||||||||||||||||||||||||||||| Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctc 1098
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 335 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 277 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 276 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 217 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 216 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 157 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 156 ctccatacgcccgtcacggat 136 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 260 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 319 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 565 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 506 Query: 320 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 379 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 505 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 446 Query: 380 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 439 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 445 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 386 Query: 440 cccgcgagttcaccagcctcttgccaatgttctc 473 ||| |||||||||||||||||||||||||||||| Sbjct: 385 ccctcgagttcaccagcctcttgccaatgttctc 352
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 1129 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1071 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1070 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 1011 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 1010 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 951 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 950 ctccatacgcccgtcacggat 930 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 260 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 319 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1359 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1300 Query: 320 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 379 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1299 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1240 Query: 380 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 439 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1239 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1180 Query: 440 cccgcgagttcaccagcctcttgccaatgttctc 473 ||| |||||||||||||||||||||||||||||| Sbjct: 1179 ccctcgagttcaccagcctcttgccaatgttctc 1146 Score = 119 bits (60), Expect = 1e-23 Identities = 114/130 (87%), Gaps = 4/130 (3%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||| Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504 Query: 154 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 210 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1444 Query: 211 acctcctcct 220 ||||||||| Sbjct: 1443 ccctcctcct 1434
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 1080 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1022 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1021 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 962 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 961 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 902 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 901 ctccatacgcccgtcacggat 881 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455 Query: 154 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 210 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1395 Query: 211 acctcctcct 220 ||||||||| Sbjct: 1394 ccctcctcct 1385 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 260 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 319 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1310 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1251 Query: 320 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 379 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1250 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1191 Query: 380 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 439 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1190 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1131 Query: 440 cccgcgagttcaccagcctcttgccaatgttctc 473 ||| |||||||||||||||||||||||||||||| Sbjct: 1130 ccctcgagttcaccagcctcttgccaatgttctc 1097
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 1118 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1060 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1059 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 1000 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 999 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 940 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 939 ctccatacgcccgtcacggat 919 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493 Query: 154 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 210 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1433 Query: 211 acctcctcct 220 ||||||||| Sbjct: 1432 ccctcctcct 1423 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 260 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 319 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1348 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1289 Query: 320 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 379 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1288 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1229 Query: 380 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 439 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1228 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1169 Query: 440 cccgcgagttcaccagcctcttgccaatgttctc 473 ||| |||||||||||||||||||||||||||||| Sbjct: 1168 ccctcgagttcaccagcctcttgccaatgttctc 1135
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 1117 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1059 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1058 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 999 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 998 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 939 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 938 ctccatacgcccgtcacggat 918 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492 Query: 154 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 210 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1432 Query: 211 acctcctcct 220 ||||||||| Sbjct: 1431 ccctcctcct 1422 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 260 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 319 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1347 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1288 Query: 320 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 379 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1287 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1228 Query: 380 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 439 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1227 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1168 Query: 440 cccgcgagttcaccagcctcttgccaatgttctc 473 ||| |||||||||||||||||||||||||||||| Sbjct: 1167 ccctcgagttcaccagcctcttgccaatgttctc 1134
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 901 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 843 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 842 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 783 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 782 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 723 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 722 ctccatacgcccgtcacggat 702 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276 Query: 154 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 210 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1216 Query: 211 acctcctcct 220 ||||||||| Sbjct: 1215 ccctcctcct 1206 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 260 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 319 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1131 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1072 Query: 320 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 379 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1071 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1012 Query: 380 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 439 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1011 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 952 Query: 440 cccgcgagttcaccagcctcttgccaatgttctc 473 ||| |||||||||||||||||||||||||||||| Sbjct: 951 ccctcgagttcaccagcctcttgccaatgttctc 918
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 1122 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1064 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1063 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 1004 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 1003 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 944 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 943 ctccatacgcccgtcacggat 923 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497 Query: 154 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 210 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1437 Query: 211 acctcctcct 220 ||||||||| Sbjct: 1436 ccctcctcct 1427 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 260 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 319 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1352 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1293 Query: 320 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 379 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1292 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1233 Query: 380 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 439 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1232 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1173 Query: 440 cccgcgagttcaccagcctcttgccaatgttctc 473 ||| |||||||||||||||||||||||||||||| Sbjct: 1172 ccctcgagttcaccagcctcttgccaatgttctc 1139
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 176 bits (89), Expect = 6e-41 Identities = 174/201 (86%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 490 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 549 ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || || Sbjct: 1116 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1058 Query: 550 ggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggt 609 |||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1057 ggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggt 998 Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 997 gcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaactt 938 Query: 670 ctccatacgaccatcacggat 690 ||||||||| || |||||||| Sbjct: 937 ctccatacgcccgtcacggat 917 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||||||||||||||||||| |||| Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Minus Query: 262 ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 321 ||||||||||||||||||||||| || || |||||| ||||| ||||| |||| |||| Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285 Query: 322 atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 381 | ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225 Query: 382 ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 441 |||||||| | ||||| |||| |||||||| ||||||||||| | || || ||| Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165 Query: 442 cgcgagttcaccagcctcttgccaatgttctc 473 | |||||||||||||||||||||||||||||| Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctc 1133
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 157 bits (79), Expect = 6e-35 Identities = 275/339 (81%), Gaps = 1/339 (0%) Strand = Plus / Minus Query: 337 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 396 |||||||| ||||| || || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183 Query: 397 ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 456 ||||||| |||||||| ||||| ||||| ||| ||||| |||| ||||| || ||| Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagc 1123 Query: 457 ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcattcgtcgta 516 | |||| |||||||||| ||| | ||||||||||||||||||||| | ||||||| Sbjct: 1122 cgcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgt-cgtcgta 1064 Query: 517 cacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgat 576 |||||| || ||||| || ||||| ||||| ||||| || || ||||||||||| || | Sbjct: 1063 cacccgcgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccag 1004 Query: 577 cttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgat 636 | | || || | |||||| ||| |||||||| ||||||| |||||||| || ||||| Sbjct: 1003 cctcaccacggcctcgtcggggacgttgtcggtgcggaagatgcccttgcacacgccgat 944 Query: 637 acggtcgtcacgggtgggagcccagtagaacttctccat 675 ||||| || |||||||| |||||||||||||||||||| Sbjct: 943 gcggtcctcccgggtgggcgcccagtagaacttctccat 905
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Plus Query: 548 atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 607 |||||||| ||||||||| |||||||||||||||||| |||||| ||| |||||| Sbjct: 108688 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 108747 Query: 608 gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 667 || ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 108748 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 108807 Query: 668 ttctccatacgaccatcacggat 690 ||||||||||| || |||||||| Sbjct: 108808 ttctccatacgcccgtcacggat 108830 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||||||||||||||||||| |||| Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Plus Query: 257 tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 316 |||||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| Sbjct: 108306 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 108365 Query: 317 ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 376 ||||| ||| ||||| ||||||||||||||||| || |||||||||| || |||| Sbjct: 108366 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 108425 Query: 377 tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 436 ||| |||||||| | ||||| |||| |||||||| ||||||||||| | || | Sbjct: 108426 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 108485 Query: 437 cgtcccgcgagttcaccagcctcttgccaatgttctc 473 | |||| |||||||||||||||||||||||||||||| Sbjct: 108486 cctccctcgagttcaccagcctcttgccaatgttctc 108522 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| | Sbjct: 112456 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 112515 Query: 672 ccat 675 |||| Sbjct: 112516 ccat 112519 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 112 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 171 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112 Query: 172 accttccggcacggg 186 || |||||||||| Sbjct: 112113 tcccgccggcacggg 112127 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 445 gagttcaccagcctcttgccaatgttctc 473 ||||||||||||||| |||| |||||||| Sbjct: 112324 gagttcaccagcctcctgccgatgttctc 112352
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Plus Query: 548 atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 607 |||||||| ||||||||| |||||||||||||||||| |||||| ||| |||||| Sbjct: 30565 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 30624 Query: 608 gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 667 || ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 30625 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 30684 Query: 668 ttctccatacgaccatcacggat 690 ||||||||||| || |||||||| Sbjct: 30685 ttctccatacgcccgtcacggat 30707 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||||||||||||||||||| |||| Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Plus Query: 257 tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 316 |||||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| Sbjct: 30183 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 30242 Query: 317 ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 376 ||||| ||| ||||| ||||||||||||||||| || |||||||||| || |||| Sbjct: 30243 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 30302 Query: 377 tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 436 ||| |||||||| | ||||| |||| |||||||| ||||||||||| | || | Sbjct: 30303 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 30362 Query: 437 cgtcccgcgagttcaccagcctcttgccaatgttctc 473 | |||| |||||||||||||||||||||||||||||| Sbjct: 30363 cctccctcgagttcaccagcctcttgccaatgttctc 30399 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| | Sbjct: 34333 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 34392 Query: 672 ccat 675 |||| Sbjct: 34393 ccat 34396 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 112 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 171 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989 Query: 172 accttccggcacggg 186 || |||||||||| Sbjct: 33990 tcccgccggcacggg 34004 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 445 gagttcaccagcctcttgccaatgttctc 473 ||||||||||||||| |||| |||||||| Sbjct: 34201 gagttcaccagcctcctgccgatgttctc 34229
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Plus Query: 548 atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 607 |||||||| ||||||||| |||||||||||||||||| |||||| ||| |||||| Sbjct: 28303827 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28303886 Query: 608 gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 667 || ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 28303887 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28303946 Query: 668 ttctccatacgaccatcacggat 690 ||||||||||| || |||||||| Sbjct: 28303947 ttctccatacgcccgtcacggat 28303969 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||||||||||||||||||| |||| Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Plus Query: 257 tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 316 |||||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| Sbjct: 28303445 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28303504 Query: 317 ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 376 ||||| ||| ||||| ||||||||||||||||| || |||||||||| || |||| Sbjct: 28303505 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28303564 Query: 377 tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 436 ||| |||||||| | ||||| |||| |||||||| ||||||||||| | || | Sbjct: 28303565 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28303624 Query: 437 cgtcccgcgagttcaccagcctcttgccaatgttctc 473 | |||| |||||||||||||||||||||||||||||| Sbjct: 28303625 cctccctcgagttcaccagcctcttgccaatgttctc 28303661 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| | Sbjct: 28307595 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28307654 Query: 672 ccat 675 |||| Sbjct: 28307655 ccat 28307658 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 112 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 171 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251 Query: 172 accttccggcacggg 186 || |||||||||| Sbjct: 28307252 tcccgccggcacggg 28307266 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 445 gagttcaccagcctcttgccaatgttctc 473 ||||||||||||||| |||| |||||||| Sbjct: 28307463 gagttcaccagcctcctgccgatgttctc 28307491
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Plus Query: 548 atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 607 |||||||| ||||||||| |||||||||||||||||| |||||| ||| |||||| Sbjct: 28286276 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28286335 Query: 608 gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 667 || ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 28286336 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28286395 Query: 668 ttctccatacgaccatcacggat 690 ||||||||||| || |||||||| Sbjct: 28286396 ttctccatacgcccgtcacggat 28286418 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||||||||||||||||||| |||| Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Plus Query: 257 tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 316 |||||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| Sbjct: 28285894 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28285953 Query: 317 ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 376 ||||| ||| ||||| ||||||||||||||||| || |||||||||| || |||| Sbjct: 28285954 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28286013 Query: 377 tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 436 ||| |||||||| | ||||| |||| |||||||| ||||||||||| | || | Sbjct: 28286014 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28286073 Query: 437 cgtcccgcgagttcaccagcctcttgccaatgttctc 473 | |||| |||||||||||||||||||||||||||||| Sbjct: 28286074 cctccctcgagttcaccagcctcttgccaatgttctc 28286110 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| | Sbjct: 28290044 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28290103 Query: 672 ccat 675 |||| Sbjct: 28290104 ccat 28290107 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 112 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 171 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700 Query: 172 accttccggcacggg 186 || |||||||||| Sbjct: 28289701 tcccgccggcacggg 28289715 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 445 gagttcaccagcctcttgccaatgttctc 473 ||||||||||||||| |||| |||||||| Sbjct: 28289912 gagttcaccagcctcctgccgatgttctc 28289940
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 533 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 592 |||||||| || ||||| ||||| || |||||||||||||||| |||||| || || Sbjct: 1164 gcaccgaagaaatcaatagattggccagggaaggtgtcgacgagcttgacaacgtggtcc 1105 Query: 593 tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 652 ||| |||||||||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 1104 tcaggaacattgtcggtcctgaagataccggtggcaacaccgatacggtcctcacgggtg 1045 Query: 653 ggagcccagtagaacttctccatacgaccatcacggat 690 |||||||||||||||||||||||||||||||||||||| Sbjct: 1044 ggagcccagtagaacttctccatacgaccatcacggat 1007
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 125 bits (63), Expect = 2e-25 Identities = 171/207 (82%) Strand = Plus / Minus Query: 258 ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 317 |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| Sbjct: 1007 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 948 Query: 318 gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 377 ||||| ||| |||| || |||||||| | ||| || || ||||||||||| || ||||| Sbjct: 947 gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcat 888 Query: 378 gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 437 || |||||||| |||||||| || | |||||||| |||||| |||| ||| ||||| Sbjct: 887 gttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 828 Query: 438 gtcccgcgagttcaccagcctcttgcc 464 ||| |||||||||||||||||||||| Sbjct: 827 ctccagcgagttcaccagcctcttgcc 801 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 533 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 592 |||||||| |||||||||||||| || |||||||||||||||| ||||| |||| ||| Sbjct: 733 gcaccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctcc 674 Query: 593 tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 652 | ||| ||||||| | ||||||||| ||||||| |||| ||||| || | |||| Sbjct: 673 ttggggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtg 614 Query: 653 ggagcccagtagaacttctccatacgaccatcacggat 690 ||||||||||||||||||||||||||||| |||||||| Sbjct: 613 ggagcccagtagaacttctccatacgaccgtcacggat 576 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 104 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 163 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090 Query: 164 tcggtgcaaccttc 177 ||||| |||||||| Sbjct: 1089 tcggtacaaccttc 1076
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 125 bits (63), Expect = 2e-25 Identities = 172/207 (83%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 486 gccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagt 545 ||||||||||||||||||||| | ||||||||||||| || ||||| || ||||| |||| Sbjct: 1243 gccgacccacttgcgcacctcgt-cgtcgtacacccgtgcccgcagcgcgccgaagaagt 1185 Query: 546 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 605 | ||||| || || ||||||||||| || | | | || || | |||||| ||| |||| Sbjct: 1184 cgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgt 1125 Query: 606 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 665 |||| ||||||| |||||||| || ||||| ||||| || |||||||| |||||||||| Sbjct: 1124 cggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtaga 1065 Query: 666 acttctccatacgaccatcacggatca 692 |||||||||| || || |||||||||| Sbjct: 1064 acttctccatgcgcccgtcacggatca 1038 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 337 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 396 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333 Query: 397 ttctcgactgtcatctttggctgctcgaa 425 ||||| | |||||||| ||||| ||||| Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 1074 catacgtccatcacggat 1057
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 1074 catacgtccatcacggat 1057
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 1103 catacgtccatcacggat 1086
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 985 catacgtccatcacggat 968
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 960 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 901 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 900 catacgtccatcacggat 883
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 14154 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 14213 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 14214 catacgtccatcacggat 14231
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 988 catacgtccatcacggat 971
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1037 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 978 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 977 catacgtccatcacggat 960
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 985 catacgtccatcacggat 968
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 988 catacgtccatcacggat 971
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 1103 catacgtccatcacggat 1086
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 3129 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 3070 Query: 673 catacgaccatcacggat 690 |||||| ||||||||||| Sbjct: 3069 catacgtccatcacggat 3052
>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small isoform precursor, mRNA, partial cds; nuclear gene for chloroplast product Length = 93 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 100 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 159 ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 93 aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34 Query: 160 ttggtcggtgcaaccttccggcacgggca 188 |||||||||||||||||||||| |||| Sbjct: 33 agggtcggtgcaaccttccggcacaggca 5
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Minus Query: 265 tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 324 |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| | Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135 Query: 325 taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 384 || |||| || |||||||| | ||| || || ||||||||||| || ||||||| ||| Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075 Query: 385 tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 444 ||||| |||||||| || | |||||||| |||||| |||| ||| ||||| ||| || Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015 Query: 445 gagttcaccagcctcttgcc 464 |||||||||||||||||||| Sbjct: 1014 gagttcaccagcctcttgcc 995 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 533 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 592 |||||||| |||||||||||||| || |||||||||||||||| ||||| |||| ||| Sbjct: 927 gcaccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctcc 868 Query: 593 tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 652 | ||| ||||||| | ||||||||| ||||||| |||| ||||| || | |||| Sbjct: 867 ttggggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtg 808 Query: 653 ggagcccagtagaacttctccatacgaccatcacggat 690 ||||||||||||||||||||||||||||| |||||||| Sbjct: 807 ggagcccagtagaacttctccatacgaccgtcacggat 770 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 104 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 163 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246 Query: 164 tcggtgcaaccttc 177 ||||| |||||||| Sbjct: 1245 tcggtacaaccttc 1232
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 533 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 592 |||||||| |||||||||||||| || |||||||||||||||| ||||| |||| ||| Sbjct: 1034 gcaccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctcc 975 Query: 593 tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 652 | ||| ||||||| | ||||||||| ||||||| |||| ||||| || | |||| Sbjct: 974 ttggggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtg 915 Query: 653 ggagcccagtagaacttctccatacgaccatcacggat 690 ||||||||||||||||||||||||||||| |||||||| Sbjct: 914 ggagcccagtagaacttctccatacgaccgtcacggat 877 Score = 103 bits (52), Expect = 8e-19 Identities = 166/204 (81%) Strand = Plus / Minus Query: 258 ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 317 |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| Sbjct: 1308 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 1249 Query: 318 gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 377 ||||| ||| |||| || |||||||| | ||| || || ||||| ||||| || ||||| Sbjct: 1248 gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcat 1189 Query: 378 gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 437 | |||||||| |||||||| || | |||||||| |||||| |||| ||| ||||| Sbjct: 1188 attgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 1129 Query: 438 gtcccgcgagttcaccagcctctt 461 ||| ||||||||||||||||||| Sbjct: 1128 ctccagcgagttcaccagcctctt 1105 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 104 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 163 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391 Query: 164 tcggtgcaaccttc 177 ||||| |||||||| Sbjct: 1390 tcggtacaaccttc 1377
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 533 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 592 |||||||| |||||||||||||| || |||||||||||||||| ||||| |||| ||| Sbjct: 897 gcaccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctcc 838 Query: 593 tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 652 | ||| ||||||| | ||||||||| ||||||| |||| ||||| || | |||| Sbjct: 837 ttggggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtg 778 Query: 653 ggagcccagtagaacttctccatacgaccatcacggat 690 ||||||||||||||||||||||||||||| |||||||| Sbjct: 777 ggagcccagtagaacttctccatacgaccgtcacggat 740 Score = 97.6 bits (49), Expect = 5e-17 Identities = 160/197 (81%) Strand = Plus / Minus Query: 265 tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 324 |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| | Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105 Query: 325 taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 384 || |||| || |||||||| | ||| || || ||||| ||||| || ||||| | ||| Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045 Query: 385 tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 444 ||||| |||||||| || | |||||||| |||||| |||| ||| ||||| ||| || Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985 Query: 445 gagttcaccagcctctt 461 ||||||||||||||||| Sbjct: 984 gagttcaccagcctctt 968 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 104 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 163 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216 Query: 164 tcggtgcaaccttc 177 ||||| |||||||| Sbjct: 1215 tcggtacaaccttc 1202
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 113 bits (57), Expect = 8e-22 Identities = 63/65 (96%) Strand = Plus / Minus Query: 626 cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 685 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2813 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 2754 Query: 686 cggat 690 ||||| Sbjct: 2753 cggat 2749
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 113 bits (57), Expect = 8e-22 Identities = 63/65 (96%) Strand = Plus / Minus Query: 626 cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 685 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1185 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 1126 Query: 686 cggat 690 ||||| Sbjct: 1125 cggat 1121 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 536 ccgaaaaagtcaatggattgtcctgggaaggtgtcgacga 575 ||||||||||| || |||||||| ||||||| ||| |||| Sbjct: 1275 ccgaaaaagtcgatagattgtccagggaaggcgtcaacga 1236
>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic sequence Length = 234 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 |||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||| |||||||||||||| |||| Sbjct: 75 ggcaacagggtcgggtcaaccttccggcacaggca 41
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 598 gacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagc 657 ||||||||| ||| ||||||||| |||| ||||| |||||||| ||||| ||||| || Sbjct: 248 gacattgtcagtcctgaagataccagtgcaaacaccaatacggtcctcacgagtgggtgc 189 Query: 658 ccagtagaacttctccatacgaccatcacggat 690 ||||||||| ||||||||||||||||||||||| Sbjct: 188 ccagtagaatttctccatacgaccatcacggat 156
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 599 acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 658 |||||||| ||| ||| ||||||||||||||||| |||||||| || | ||| |||||| Sbjct: 1043 acattgtcagtcctgaaaatacccttgcagacaccaatacggtcttccctggtaggagcc 984 Query: 659 cagtagaacttctccatacgaccatcacggat 690 |||||||| || |||||||||||||||||||| Sbjct: 983 cagtagaatttttccatacgaccatcacggat 952 Score = 44.1 bits (22), Expect = 0.61 Identities = 43/50 (86%) Strand = Plus / Minus Query: 286 gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 335 |||||||||||||||||||| || || |||| |||||||| ||||||| Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 266 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 325 ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | || Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860 Query: 326 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 385 | ||||||||||||||||||||||||| || ||||||||| || |||||||| |||| Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800 Query: 386 actctagcagcttctcgactgtcatctttggctgctcgaa 425 |||| | |||||||||| || ||||| ||||||||||| Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760 Score = 93.7 bits (47), Expect = 7e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 509 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 568 |||||||| ||||| |||||||| || ||||| ||||| ||||| || || ||||||||| Sbjct: 677 tcgtcgtagacccgggcacgcagcgcgccgaagaagtcgatggactggccagggaaggtg 618 Query: 569 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 628 ||||| | || |||||| ||| || ||| |||||| ||||||| ||||||||| Sbjct: 617 tcgaccagctggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcag 558 Query: 629 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 675 || ||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 557 acgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccat 511
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 266 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 325 ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | || Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255 Query: 326 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 385 | ||||||||||||||||||||||||| || ||||||||| || |||||||| |||| Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195 Query: 386 actctagcagcttctcgactgtcatctttggctgctcgaa 425 |||| | |||||||||| || ||||| ||||||||||| Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155 Score = 85.7 bits (43), Expect = 2e-13 Identities = 136/167 (81%) Strand = Plus / Minus Query: 509 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 568 |||||||| ||||| |||||||| || ||||| || || ||||| || || ||||||||| Sbjct: 1072 tcgtcgtagacccgggcacgcagcgcgccgaagaaatcgatggactggccagggaaggtg 1013 Query: 569 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 628 ||||| | || |||||| ||| || ||| |||||| ||||||| ||||||||| Sbjct: 1012 tcgaccagctggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcag 953 Query: 629 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 675 || ||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 952 acgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccat 906
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 266 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 325 ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | || Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255 Query: 326 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 385 | ||||||||||||||||||||||||| || ||||||||| || |||||||| |||| Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195 Query: 386 actctagcagcttctcgactgtcatctttggctgctcgaa 425 |||| | |||||||||| || ||||| ||||||||||| Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| ||||||||||| ||||| ||||| || |||||||| |||||||||||||||| Sbjct: 969 ggaagatgcccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 910 Query: 672 ccat 675 |||| Sbjct: 909 ccat 906
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 624 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 683 |||||||||| ||||| ||||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 143 tgcagacaccaatacgatcgtcgcgggttggtgcccagtagaatttctccatacgaccat 84 Query: 684 cacggat 690 ||||||| Sbjct: 83 cacggat 77
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 85.7 bits (43), Expect = 2e-13 Identities = 136/167 (81%) Strand = Plus / Minus Query: 509 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 568 |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| | Sbjct: 618 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 559 Query: 569 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 628 ||||||| || |||||| |||||| ||| |||||| ||||||| |||||||| Sbjct: 558 tcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgcac 499 Query: 629 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 675 || ||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 498 acgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccat 452
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 624 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 683 ||||||| || ||||| || || ||||||||||||||||||||||||||||||||||| | Sbjct: 1034 tgcagactccaatacgatcttcgcgggtgggagcccagtagaacttctccatacgaccgt 975 Query: 684 cacggat 690 ||||||| Sbjct: 974 cacggat 968 Score = 56.0 bits (28), Expect = 2e-04 Identities = 106/132 (80%) Strand = Plus / Minus Query: 294 gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 353 |||||||||||| ||||| |||| ||||| ||| | ||||| | || || | ||| || Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304 Query: 354 attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 413 ||| || ||||| ||||| ||||||| |||||||| || ||||| |||| |||||||| Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244 Query: 414 tggctgctcgaa 425 ||||||||||| Sbjct: 1243 cggctgctcgaa 1232
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 83.8 bits (42), Expect = 7e-13 Identities = 132/162 (81%) Strand = Plus / Minus Query: 529 cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacaga 588 ||||||||| || |||||||| |||||||| |||||||| ||||| ||||| || |||| Sbjct: 435 cagagcaccaaagaagtcaatagattgtccagggaaggtatcgacaatctttacaacagc 376 Query: 589 ctcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacg 648 || ||| || ||||||||| ||| ||||||||||| ||||| || | || || | Sbjct: 375 ttcctcaggcacgttgtcggtcctgaaaatacccttgcaaacaccaattctatcttccct 316 Query: 649 ggtgggagcccagtagaacttctccatacgaccatcacggat 690 || || ||||| ||||||||||||||||||||||||||||| Sbjct: 315 agttggtgcccaatagaacttctccatacgaccatcacggat 274
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 623 ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacca 682 ||||||||||| |||||||| || | |||||| ||||||||||| ||||||||||| ||| Sbjct: 1019 ttgcagacaccaatacggtcctccctggtgggtgcccagtagaatttctccatacggcca 960 Query: 683 tcacggat 690 |||||||| Sbjct: 959 tcacggat 952 Score = 40.1 bits (20), Expect = 9.5 Identities = 68/84 (80%) Strand = Plus / Minus Query: 295 ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 354 ||||||||||| ||||| |||| | |||||| ||||||| | || || | |||||| Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287 Query: 355 ttgtcctgctcctggacgagcatg 378 || |||||||||||||| |||||| Sbjct: 1286 ttctcctgctcctggacaagcatg 1263
>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase Length = 2472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 283 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 342 |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59 Query: 343 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 398 || | ||| |||||||||||||||||||| ||||||| || |||||||||||||| Sbjct: 58 actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 624 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 683 |||||||||| ||||| || || | || ||||||||||||||||||||||||||||||| Sbjct: 456 tgcagacaccaatacgatcttctctagtaggagcccagtagaacttctccatacgaccat 397 Query: 684 cacggat 690 ||||||| Sbjct: 396 cacggat 390 Score = 44.1 bits (22), Expect = 0.61 Identities = 43/50 (86%) Strand = Plus / Minus Query: 533 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 582 |||||||| || || |||||||| || ||||||||||| || |||||||| Sbjct: 547 gcaccgaagaaatcgatggattggccagggaaggtgtcaacaatcttgac 498
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470 Query: 672 ccatacgaccatcacggat 690 |||| || || |||||||| Sbjct: 469 ccatgcgcccgtcacggat 451
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 672 ccatacgaccatcacggat 690 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476 Query: 672 ccatacgaccatcacggat 690 |||| || || |||||||| Sbjct: 475 ccatgcgcccgtcacggat 457
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 672 ccatacgaccatcacggat 690 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Minus Query: 509 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 568 |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| | Sbjct: 626 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 567 Query: 569 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 628 ||||||| || |||||| |||||| ||| |||||| ||||||| |||||||| Sbjct: 566 tcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgcac 507 Query: 629 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 675 || ||||| ||||| || |||||||| |||||||||||||| ||||| Sbjct: 506 acgccgatgcggtcctcccgggtgggcgcccagtagaacttgtccat 460
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 672 ccatacgaccatcacggat 690 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 672 ccatacgaccatcacggat 690 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 672 ccatacgaccatcacggat 690 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474 Query: 672 ccatacgaccatcacggat 690 |||| || || |||||||| Sbjct: 473 ccatgcgcccgtcacggat 455
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 |||||| ||||||||||||||| ||| ||||| |||| | ||||||||||| |||| || Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||||||||||||||||||| |||| Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 94 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 153 |||||| ||||||||||||||| ||| ||||| |||| | ||||||||||| |||| || Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728 Query: 154 ggcattttggtcggtgcaaccttccggcacgggca 188 |||| |||||||||||||||||||||| |||| Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 ||||||||| |||||||||| || ||||| || | |||||| ||||||||||| ||||| Sbjct: 872 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 813 Query: 673 catacgaccatcacg 687 ||||||||||||||| Sbjct: 812 catacgaccatcacg 798
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 613 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 672 ||||||||| |||||||||| || ||||| || | |||||| ||||||||||| ||||| Sbjct: 1045 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 986 Query: 673 catacgaccatcacg 687 ||||||||||||||| Sbjct: 985 catacgaccatcacg 971
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 605 tcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtag 664 |||||| |||| || |||||||| ||||| || ||||| || | || || ||||||||| Sbjct: 1042 tcggtccggaaaattcccttgcaaacaccaatgcggtcttcccttgttggtgcccagtag 983 Query: 665 aacttctccatacgaccatcacggat 690 |||||||||||||||||||||||||| Sbjct: 982 aacttctccatacgaccatcacggat 957
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474 Query: 672 ccat 675 |||| Sbjct: 473 ccat 470
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 672 ccat 675 |||| Sbjct: 471 ccat 468
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470 Query: 672 ccat 675 |||| Sbjct: 469 ccat 466
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470 Query: 672 ccat 675 |||| Sbjct: 469 ccat 466
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 672 ccat 675 |||| Sbjct: 471 ccat 468
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 612 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 671 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476 Query: 672 ccat 675 |||| Sbjct: 475 ccat 472
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 656 gcccagtagaacttctccatacgaccatcacggat 690 ||||||||||||||||||||||||||||||||||| Sbjct: 222 gcccagtagaacttctccatacgaccatcacggat 188 Score = 44.1 bits (22), Expect = 0.61 Identities = 43/50 (86%) Strand = Plus / Minus Query: 533 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 582 |||||||||||||| || |||||||| |||||| | || || |||||||| Sbjct: 345 gcaccgaaaaagtcgatagattgtccagggaagttatcaacaatcttgac 296
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 604 gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 663 ||||||| ||| ||||| ||||| ||||||||||||||||| | || || |||||||| Sbjct: 853 gtcggtcctgaaaatacctttgcaaacaccgatacggtcgtccctagttggtgcccagta 794 Query: 664 gaacttctccatacgaccatcacggat 690 || |||||||||||||| |||||||| Sbjct: 793 aaatttctccatacgaccgtcacggat 767 Score = 48.1 bits (24), Expect = 0.039 Identities = 54/64 (84%) Strand = Plus / Minus Query: 512 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 571 ||||| |||||||| | || |||||||| || || |||||||| || |||||||||||| Sbjct: 945 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 886 Query: 572 acga 575 |||| Sbjct: 885 acga 882
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 656 gcccagtagaacttctccatacgaccatcacggat 690 ||||||||||||||||||||||||||||||||||| Sbjct: 963 gcccagtagaacttctccatacgaccatcacggat 929
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 656 gcccagtagaacttctccatacgaccatcacggat 690 ||||||||||||||||||||||||||||||||||| Sbjct: 982 gcccagtagaacttctccatacgaccatcacggat 948
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 529 cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtc 570 ||||||||||||||||||||||||||| || ||||||||||| Sbjct: 1113 cagagcaccgaaaaagtcaatggattggcccgggaaggtgtc 1072 Score = 63.9 bits (32), Expect = 7e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 599 acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 658 |||||||||||| ||| ||||| |||| |||||||| | || || | |||||| ||| Sbjct: 1043 acattgtcggtcctgaaaatacctgtgcaaacaccgatcctatcttccctggtgggtgcc 984 Query: 659 cagtagaacttctccatacgaccatcacggat 690 ||||| ||||||||||||||||| |||||||| Sbjct: 983 cagtaaaacttctccatacgaccgtcacggat 952
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 67.9 bits (34), Expect = 4e-08 Identities = 130/162 (80%) Strand = Plus / Minus Query: 529 cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacaga 588 ||||||||| || |||||||| |||||||| |||||||| ||||| ||||| | || | Sbjct: 1079 cagagcaccaaagaagtcaatagattgtccagggaaggtatcgacaatctttataacggc 1020 Query: 589 ctcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacg 648 || ||| || ||||||||| ||| ||||||||||| ||||| || | || || | Sbjct: 1019 ttcctcaggcacgttgtcggtcctgaaaatacccttgcaaacaccaattctatcttccct 960 Query: 649 ggtgggagcccagtagaacttctccatacgaccatcacggat 690 || || ||||| ||||||||||||||||||||||||||||| Sbjct: 959 agttggtgcccaatagaacttctccatacgaccatcacggat 918
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 610 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 669 ||||||||| ||| ||||||| ||||| ||||| ||||||||||| ||||||| |||| Sbjct: 1861 ctggaagattcccatgcagacgccgatgcggtcctcacgggtggggttccagtagtactt 1802 Query: 670 ctccatacgaccatcacggat 690 |||||| || || |||||||| Sbjct: 1801 ctccatgcggccgtcacggat 1781 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 337 agctgcacacgcttgacattgtcctgctc 365 |||||||| ||||||||||| |||||||| Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 61.9 bits (31), Expect = 3e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 604 gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 663 ||||||| ||| ||||| ||||| ||||||| ||||||||| | || || |||||||| Sbjct: 852 gtcggtcctgaaaatacctttgcaaacaccgacacggtcgtccctagttggtgcccagta 793 Query: 664 gaacttctccatacgaccatcacggat 690 || |||||||||||||| |||||||| Sbjct: 792 aaatttctccatacgaccgtcacggat 766 Score = 48.1 bits (24), Expect = 0.039 Identities = 54/64 (84%) Strand = Plus / Minus Query: 512 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 571 ||||| |||||||| | || |||||||| || || |||||||| || |||||||||||| Sbjct: 944 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 885 Query: 572 acga 575 |||| Sbjct: 884 acga 881
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 656 gcccagtagaacttctccatacgaccatcacggat 690 ||||||||||| ||||||||||||||||||||||| Sbjct: 999 gcccagtagaatttctccatacgaccatcacggat 965 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 529 cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 582 |||||||||||| || ||||| |||||||| |||||| | |||||||||||||| Sbjct: 1126 cagagcaccgaagaaatcaatagattgtccagggaagctatcgacgatcttgac 1073
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 509 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 568 ||||||||||| || |||||||| || ||||| ||||||||||| || || ||||||||| Sbjct: 2723 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 2664 Query: 569 tc 570 || Sbjct: 2663 tc 2662
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 653 ggagcccagtagaacttctccatacgaccatcacggat 690 ||||||||||||||||| |||||||||||||| ||||| Sbjct: 419 ggagcccagtagaacttttccatacgaccatcgcggat 382
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 509 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 568 ||||||||||| || |||||||| || ||||| ||||||||||| || || ||||||||| Sbjct: 1033 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 974 Query: 569 tc 570 || Sbjct: 973 tc 972
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 656 gcccagtagaacttctccatacgaccatcacg 687 ||||||||||||||||||||||| |||||||| Sbjct: 995 gcccagtagaacttctccatacgcccatcacg 964
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 658 ccagtagaacttctccatacgaccatcacggatca 692 ||||||||||||||||||||| |||||||| |||| Sbjct: 678 ccagtagaacttctccatacgcccatcacgaatca 644
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 635 atacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatcacg 687 ||||| || ||||| || |||||||||||||| || ||||| ||||||||||| Sbjct: 1018 atacgatcttcacgagttggagcccagtagaatttatccatccgaccatcacg 966 Score = 44.1 bits (22), Expect = 0.61 Identities = 37/42 (88%) Strand = Plus / Minus Query: 532 agcaccgaaaaagtcaatggattgtcctgggaaggtgtcgac 573 |||||| || ||||| || || |||||||||||||||||||| Sbjct: 1121 agcaccaaagaagtctattgactgtcctgggaaggtgtcgac 1080
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 50.1 bits (25), Expect = 0.010 Identities = 58/67 (86%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 626 cagacaccgatacggtcgtcacgggtgggagcccagt--agaacttctccatacgaccat 683 ||||||||||||||||| |||||||| | | ||||| |||||||||||||||| |||| Sbjct: 1016 cagacaccgatacggtcttcacgggtcg--ggccagtcaagaacttctccatacgtccat 959 Query: 684 cacggat 690 || |||| Sbjct: 958 caaggat 952
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 641 tcgtcacgggtgggagcccagtagaacttctccatacgaccatcacg 687 |||||||| || || ||||||||||| || |||||||| |||||||| Sbjct: 6892 tcgtcacgagtaggtgcccagtagaatttttccatacgtccatcacg 6938
>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence Length = 119249 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 catcacccagagctgcctggct 320 |||||||||||||||||||||| Sbjct: 51275 catcacccagagctgcctggct 51254
>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence Length = 177245 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tatatttagagatatattaac 21 ||||||||||||||||||||| Sbjct: 12315 tatatttagagatatattaac 12335
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 gggaaggtgtcgacgatcttg 580 ||||||||||||||||||||| Sbjct: 3653 gggaaggtgtcgacgatcttg 3673
>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence Length = 98660 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 tatatttagagatatattaac 21 ||||||||||||||||||||| Sbjct: 66387 tatatttagagatatattaac 66367
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 aaacatcagatattaaaagtg 90 ||||||||||||||||||||| Sbjct: 3040440 aaacatcagatattaaaagtg 3040420
>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence Length = 75381 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 atgcagcaagagatggtgggt 241 ||||||||||||||||||||| Sbjct: 63530 atgcagcaagagatggtgggt 63550
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 aaacatcagatattaaaagtg 90 ||||||||||||||||||||| Sbjct: 3040385 aaacatcagatattaaaagtg 3040365
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 aaacatcagatattaaaagtg 90 ||||||||||||||||||||| Sbjct: 114403 aaacatcagatattaaaagtg 114423
>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence Length = 105452 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 tatatttagagatatattaac 21 ||||||||||||||||||||| Sbjct: 6217 tatatttagagatatattaac 6197
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 610 ctggaagatacccttgcagacacc 633 ||||| |||||||||||||||||| Sbjct: 67288 ctggatgatacccttgcagacacc 67265
>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 262062 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cctttacctcctcctatgca 225 |||||||||||||||||||| Sbjct: 46359 cctttacctcctcctatgca 46378
>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel alpha subunit mRNA, partial cds Length = 3448 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 catcacccagagctgcctggctca 322 |||| ||||||||||||||||||| Sbjct: 1542 catcgcccagagctgcctggctca 1565
>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18, and complete cds Length = 16432 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cctttacctcctcctatgca 225 |||||||||||||||||||| Sbjct: 1637 cctttacctcctcctatgca 1656
>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence Length = 202128 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cctttacctcctcctatgca 225 |||||||||||||||||||| Sbjct: 32945 cctttacctcctcctatgca 32964
>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA Length = 531 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 gtcagcaagctgcacacgct 349 |||||||||||||||||||| Sbjct: 242 gtcagcaagctgcacacgct 223
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 ttgacgacagactcgtcact 597 |||||||||||||||||||| Sbjct: 289 ttgacgacagactcgtcact 308
>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence Length = 177402 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tcagatattaaaagtggcat 94 |||||||||||||||||||| Sbjct: 141058 tcagatattaaaagtggcat 141077
>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence Length = 163782 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tcagatattaaaagtggcat 94 |||||||||||||||||||| Sbjct: 142564 tcagatattaaaagtggcat 142583
>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence Length = 204813 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 tcagatattaaaagtggcat 94 |||||||||||||||||||| Sbjct: 95930 tcagatattaaaagtggcat 95911
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 656 gcccagtagaacttctccatacgaccatcacg 687 ||||| ||||| |||||||||||||| ||||| Sbjct: 103825 gcccaatagaatttctccatacgaccgtcacg 103856
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 656 gcccagtagaacttctccatacgaccatcacg 687 ||||| ||||| |||||||||||||| ||||| Sbjct: 82850 gcccaatagaatttctccatacgaccgtcacg 82881
>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA, complete cds Length = 3459 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 catcacccagagctgcctggctca 322 |||| ||||||||||||||||||| Sbjct: 1596 catcgcccagagctgcctggctca 1619
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence Length = 161308 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ttgacattgtcctgctcctg 368 |||||||||||||||||||| Sbjct: 126438 ttgacattgtcctgctcctg 126419
>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), mRNA Length = 6183 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 catcacccagagctgcctggctca 322 |||| ||||||||||||||||||| Sbjct: 1912 catcgcccagagctgcctggctca 1935
>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, section 128 of 469 of the complete genome Length = 11388 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 103 ggtgtaaaggcagctgccgtcgtcgctc 130 |||||| |||| |||||||||||||||| Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133
>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 Length = 504369 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 aaacatgcccagcaatcgcttgga 46 |||||||||||||||||| ||||| Sbjct: 41692 aaacatgcccagcaatcgattgga 41715
>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 176974 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cctttacctcctcctatgca 225 |||||||||||||||||||| Sbjct: 34662 cctttacctcctcctatgca 34681
>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds, alternatively spliced Length = 3430 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 catcacccagagctgcctggctca 322 |||| ||||||||||||||||||| Sbjct: 1636 catcgcccagagctgcctggctca 1659
>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds, alternatively spliced Length = 4490 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 catcacccagagctgcctggctca 322 |||| ||||||||||||||||||| Sbjct: 2003 catcgcccagagctgcctggctca 2026
>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds, alternatively spliced Length = 6183 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 catcacccagagctgcctggctca 322 |||| ||||||||||||||||||| Sbjct: 1912 catcgcccagagctgcctggctca 1935
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tggcatgcttaaaaggtgta 108 |||||||||||||||||||| Sbjct: 78235 tggcatgcttaaaaggtgta 78254
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 acaccgatacggtcgtcacg 648 |||||||||||||||||||| Sbjct: 3056308 acaccgatacggtcgtcacg 3056327
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence Length = 125424 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttgacattgtcctgctcctg 368 |||||||||||||||||||| Sbjct: 106960 ttgacattgtcctgctcctg 106979
>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit (KCNMA1), mRNA Length = 3459 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 catcacccagagctgcctggctca 322 |||| ||||||||||||||||||| Sbjct: 1596 catcgcccagagctgcctggctca 1619
>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle) (predicted) (Lmod1_predicted), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 cttgctgtgctcctttacctcctc 218 ||||||| |||||||||||||||| Sbjct: 648 cttgctgggctcctttacctcctc 625
>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence Length = 158595 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cctttacctcctcctatgca 225 |||||||||||||||||||| Sbjct: 27755 cctttacctcctcctatgca 27736
>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence Length = 153155 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tatatttagagatatattaa 20 |||||||||||||||||||| Sbjct: 67944 tatatttagagatatattaa 67963
>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete sequence Length = 230848 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 atcagatattaaaagtggcatgct 97 ||||||||||||||||| |||||| Sbjct: 127875 atcagatattaaaagtgccatgct 127852 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,611,993 Number of Sequences: 3902068 Number of extensions: 4611993 Number of successful extensions: 85959 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85425 Number of HSP's gapped (non-prelim): 446 length of query: 692 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 669 effective length of database: 17,143,297,704 effective search space: 11468866163976 effective search space used: 11468866163976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
