ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9e24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EXOC5_ARATH (Q8RVQ5) Exocyst complex component 5 (Exocyst comple... 192 7e-49
2EXOC5_HUMAN (O00471) Exocyst complex component 5 (Exocyst comple... 70 4e-12
3EXOC5_RAT (P97878) Exocyst complex component 5 (Exocyst complex ... 69 8e-12
4EXOC5_DROME (Q9XTM1) Exocyst complex component 5 (Exocyst comple... 69 1e-11
5EXOC5_MOUSE (Q3TPX4) Exocyst complex component 5 (Exocyst comple... 68 2e-11
6SEC10_YEAST (Q06245) Exocyst complex component SEC10 59 9e-09
7EXOC5_CAEEL (Q18406) Probable exocyst complex component 5 (Exocy... 46 8e-05
8POF6_SCHPO (O74854) F-box protein pof6 41 0.003
9PUR5_ENTFA (Q833Z1) Phosphoribosylformylglycinamidine cyclo-liga... 31 2.5
10PDR5_ARATH (Q9ZUT8) Probable pleiotropic drug resistance protein 5 30 4.3
11SRA31_CAEEL (Q18881) Serpentine receptor class alpha-31 (Protein... 30 7.4
12S6A12_HUMAN (P48065) Sodium- and chloride-dependent betaine tran... 29 9.7

>EXOC5_ARATH (Q8RVQ5) Exocyst complex component 5 (Exocyst complex component|
            Sec10)
          Length = 829

 Score =  192 bits (488), Expect = 7e-49
 Identities = 94/122 (77%), Positives = 111/122 (90%)
 Frame = -1

Query: 617  VLEVAFSALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSF 438
            VLE AF+ALEGLNKQ+FLTELGNR+ K LL HWQKFTF+PSGGLRLKRD+ EY  FV+SF
Sbjct: 703  VLESAFTALEGLNKQAFLTELGNRLEKLLLTHWQKFTFNPSGGLRLKRDLNEYVGFVKSF 762

Query: 437  NAPSIDEKFELLGIMANVFIVAPESLASLFEGTPSIRKDALRFIQLRDDYKTAKIASMLN 258
             APS+DEKFELLGI+ANVFIVAP+SL +LFEG+PSIRKDA RFIQLR+DYK+AK+A+ L+
Sbjct: 763  GAPSVDEKFELLGIIANVFIVAPDSLPTLFEGSPSIRKDAQRFIQLREDYKSAKLATKLS 822

Query: 257  SI 252
            S+
Sbjct: 823  SL 824



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>EXOC5_HUMAN (O00471) Exocyst complex component 5 (Exocyst complex component|
           Sec10) (hSec10)
          Length = 708

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 36/113 (31%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
 Frame = -1

Query: 599 SALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSID 420
           ++++G N  + L ELG R H+ +  H Q++++S  GG+    D+ EY +  + F  P + 
Sbjct: 592 NSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPMVL 651

Query: 419 EKFELLGIMANVFIVAPESLASLFEG--TPSIRKDALR-FIQLRDDYKTAKIA 270
             F+ L  + N+ +VAP++L  +  G    ++ K+ L  F+QLR DY++A++A
Sbjct: 652 HLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLA 704



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>EXOC5_RAT (P97878) Exocyst complex component 5 (Exocyst complex component|
           Sec10) (71 kDa component of rsec6/8 secretory complex)
           (p71)
          Length = 708

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
 Frame = -1

Query: 599 SALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSID 420
           ++++G N  + L ELG R H+    H Q++++S  GG+    D+ EY +  + F  P + 
Sbjct: 592 NSMDGKNVDTVLMELGVRFHRLTYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPMVL 651

Query: 419 EKFELLGIMANVFIVAPESLASLFEG--TPSIRKDALR-FIQLRDDYKTAKIA 270
             F+ L  + N+ +VAP++L  +  G    ++ K+ L  F+QLR DY++A++A
Sbjct: 652 HLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLA 704



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>EXOC5_DROME (Q9XTM1) Exocyst complex component 5 (Exocyst complex component|
           Sec10)
          Length = 710

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
 Frame = -1

Query: 593 LEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEK 414
           ++G N Q+ LTE G R+H+ + +H Q   F+ +G +    D+ EY + +R  ++P + + 
Sbjct: 592 VDGENLQNVLTEFGTRLHRVIYDHLQTMQFNTAGAMCAICDVNEYRKCIRELDSPLVTQL 651

Query: 413 FELLGIMANVFIVAPESLASLFEGTP--SIRKDALR-FIQLRDDYKTAKIASMLNSIM 249
           F++L  + N+ +V P++L  +  G     + K  +R FIQLR D++  K  + L  I+
Sbjct: 652 FDILHALCNLLLVKPQNLQEVCTGDTLNYLDKSVVRQFIQLRTDFRIIKNTNYLKGII 709



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>EXOC5_MOUSE (Q3TPX4) Exocyst complex component 5 (Exocyst complex component|
           Sec10)
          Length = 708

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 35/113 (30%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
 Frame = -1

Query: 599 SALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSID 420
           ++++G N  + L ELG R H+ +  H Q++++S  G +    D+ EY +  + F  P + 
Sbjct: 592 NSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGDMLAICDVAEYRKCAKDFKIPMVL 651

Query: 419 EKFELLGIMANVFIVAPESLASLFEG--TPSIRKDALR-FIQLRDDYKTAKIA 270
             F+ L  + N+ +VAP++L  +  G    ++ K+ L  F+QLR DY++A++A
Sbjct: 652 HLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYRSARLA 704



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>SEC10_YEAST (Q06245) Exocyst complex component SEC10|
          Length = 871

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
 Frame = -1

Query: 617  VLEVAFSALEGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSF 438
            + E +   L+G N Q+FLT +G  ++  LL+H+  F  +  GG+ + +DI  Y   +  +
Sbjct: 745  IFEQSSKFLKGKNLQTFLTLIGEELYGLLLSHYSHFQVNSIGGVVVTKDIIGYQTAIEDW 804

Query: 437  NAPSIDEKFELLGIMANVFIVAPESLASLF-EG-TPSIRKDALR-FIQLRDDY 288
               S+ +KF  L  +AN+F V PE L SL  EG    I +D ++ +I  R+D+
Sbjct: 805  GVASLIDKFATLRELANLFTVQPELLESLTKEGHLADIGRDIIQSYISNREDF 857



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>EXOC5_CAEEL (Q18406) Probable exocyst complex component 5 (Exocyst complex|
           component Sec10)
          Length = 659

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
 Frame = -1

Query: 590 EGLNKQSFLTELGNRMHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKF 411
           +G N ++  ++L  R+ K +L H Q+FT++ +G + L  D+ E    V  +   +   ++
Sbjct: 548 DGENLEALQSDLATRLFKFMLTHIQQFTYNSTGAVLLLCDVGELRTLVSKWRVQNALTQW 607

Query: 410 ELLGIMANVFIVAPESL-----ASLFEGTPSIRKDALRFIQLRDDYKTAK 276
           E L  + N+  V P+ +     +SL E     R+    F++LR D+++ K
Sbjct: 608 ESLQALTNLLAVLPDQVNETAHSSLLENVD--RQLIHDFVRLRTDFRSIK 655



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>POF6_SCHPO (O74854) F-box protein pof6|
          Length = 872

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = -1

Query: 569 FLTELGNRMHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMA 390
           F  E+G R+   L  + +   FS  GGL+L  D   Y EF+ S +  S+   F+ L  +A
Sbjct: 752 FYKEVGMRLFDSLTRYIKSHKFSVDGGLKLLSDCNLYYEFIHSLHQSSLLPYFKTLKEIA 811

Query: 389 NVFIV 375
           ++FI+
Sbjct: 812 HLFII 816



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>PUR5_ENTFA (Q833Z1) Phosphoribosylformylglycinamidine cyclo-ligase (EC|
           6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole
           synthetase) (AIR synthase)
          Length = 343

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +3

Query: 438 EATDKLPILSNVTFQP*PTTRTK---RELLPMIKKALVHAVSQFSQKG 572
           + TDKLP L+  T      T TK   +ELLP++K  LVH  +  +  G
Sbjct: 205 KTTDKLPELAPKTLGEELLTPTKIYVKELLPLLKAGLVHGAAHITGGG 252



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>PDR5_ARATH (Q9ZUT8) Probable pleiotropic drug resistance protein 5|
          Length = 1413

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = -1

Query: 431 PSIDEKFELLGIMANVFIVAPESLASLFEGTPSIRKDALRFIQLRDDYKTAKIASMLNSI 252
           PSI+ ++E LG+ A   +V  ++L +L+     +  D L+   +R +    KI + ++ I
Sbjct: 102 PSIEVRYEHLGVEAACEVVEGKALPTLWNSLKHVFLDLLKLSGVRTNEANIKILTDVSGI 161

Query: 251 MS 246
           +S
Sbjct: 162 IS 163



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>SRA31_CAEEL (Q18881) Serpentine receptor class alpha-31 (Protein sra-31)|
          Length = 338

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -1

Query: 173 SILTISVACIIE--LHYYVNSFGSLCFSVSNFF 81
           SIL  S  C+IE  L+YY N F SLC  +S FF
Sbjct: 94  SILFQSSECLIESNLYYYTNLFSSLC-CISLFF 125



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>S6A12_HUMAN (P48065) Sodium- and chloride-dependent betaine transporter|
           (Na+/Cl-betaine/GABA transporter) (BGT-1)
          Length = 614

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 12/51 (23%), Positives = 29/51 (56%)
 Frame = -1

Query: 170 ILTISVACIIELHYYVNSFGSLCFSVSNFFLACWILVVHVWVYEILVANWI 18
           ILTI+V C +   + V   G   F + +++ +  I ++ + ++E++  +W+
Sbjct: 425 ILTIAVMCYLIGLFLVTEGGMYIFQLFDYYASSGICLLFLSLFEVVCISWV 475


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,406,754
Number of Sequences: 219361
Number of extensions: 1635421
Number of successful extensions: 3563
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3560
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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