ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9e22 |
|---|---|
| Clone Library Name | barley_pub |
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 67.8 bits (164), Expect(2) = 1e-20 Identities = 31/74 (41%), Positives = 43/74 (58%) Frame = -2 Query: 499 QPCYQPDTLVSHASYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLYMAAGSKIST 320 QPCY P+ + SHAS+AFN YYQ+ + C F G + TT+DPSY TC Y + + +T Sbjct: 396 QPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANAT 455 Query: 319 KNSTTSPARSGSSP 278 + A +SP Sbjct: 456 NGNFPPDALGPASP 469 Score = 52.0 bits (123), Expect(2) = 1e-20 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Frame = -1 Query: 695 PDQSSIYSVDWTGRGNVDIMTGGNLTSSNGTWCVASTNVSETALQNGLNWACGPGNVDCS 516 P+ +S+Y + +G + + G ++ +CVA + + L +GLNWACG G +C+ Sbjct: 337 PNGTSVYPLSLSGGSSSAALNGSSM------FCVAKADADDDKLVDGLNWACGQGRANCA 390 Query: 515 AIQP-KPTLLP 486 AIQP +P LP Sbjct: 391 AIQPGQPCYLP 401
>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 501 Score = 67.4 bits (163), Expect(2) = 2e-19 Identities = 32/82 (39%), Positives = 48/82 (58%) Frame = -2 Query: 505 QSQPCYQPDTLVSHASYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLYMAAGSKI 326 Q + CY+PD +V+H++YAFN+YYQ+ G +C F G TT DPS TC++ + Sbjct: 392 QGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFPGSAKSN 451 Query: 325 STKNSTTSPARSGSSPSLLAQC 260 T + TS A + S+ S + C Sbjct: 452 QTLGNNTS-ALAPSANSTTSGC 472 Score = 48.1 bits (113), Expect(2) = 2e-19 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = -1 Query: 617 SSNGTWCVASTNVSETALQNGLNWACGPGNVDCSAI 510 ++N T+C+A V LQ L+WACGPG VDCSA+ Sbjct: 355 TTNQTFCIAKEKVDRKMLQAALDWACGPGKVDCSAL 390
>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 402 Score = 66.6 bits (161), Expect(2) = 6e-19 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 4/80 (5%) Frame = -2 Query: 499 QPCYQPDTLVSHASYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLYMAA---GSK 329 + CYQP+ + HAS+AFNSYYQ+ G +C F G M TT DPS+ +C++ + G++ Sbjct: 306 ESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGNR 365 Query: 328 IST-KNSTTSPARSGSSPSL 272 T NST A +S SL Sbjct: 366 TQTVVNSTEVAAGEATSRSL 385 Score = 47.4 bits (111), Expect(2) = 6e-19 Identities = 19/38 (50%), Positives = 25/38 (65%) Frame = -1 Query: 617 SSNGTWCVASTNVSETALQNGLNWACGPGNVDCSAIQP 504 ++N T+C+A V LQ L+WACGPG +CS IQP Sbjct: 267 TTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQP 304
>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 461 Score = 67.4 bits (163), Expect(2) = 4e-17 Identities = 27/51 (52%), Positives = 37/51 (72%) Frame = -2 Query: 493 CYQPDTLVSHASYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLYMA 341 C+ P++L +HASY N+YYQ NG TD+AC F G G+ T+ DPSY C Y++ Sbjct: 411 CFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKYVS 461 Score = 40.4 bits (93), Expect(2) = 4e-17 Identities = 19/37 (51%), Positives = 22/37 (59%) Frame = -1 Query: 617 SSNGTWCVASTNVSETALQNGLNWACGPGNVDCSAIQ 507 S G WCVA + T LQN +N+AC G VDC IQ Sbjct: 372 SGGGKWCVAKDGANGTDLQNNINYAC--GFVDCKPIQ 406
>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Anther-specific protein A6) Length = 478 Score = 47.0 bits (110), Expect(2) = 4e-12 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -2 Query: 493 CYQPDTLVSHASYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLY 347 CY+P ++ HASYA NSY+ Q + C F G TT +P D C + Sbjct: 425 CYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNPGNDRCKF 473 Score = 43.9 bits (102), Expect(2) = 4e-12 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 8/72 (11%) Frame = -1 Query: 695 PDQSSIYSVDWTGRGNVDIMTG--------GNLTSSNGTWCVASTNVSETALQNGLNWAC 540 PD S IY VD+TG+ +TG N+ WCV +ET L+ L AC Sbjct: 353 PDGSPIYDVDFTGQTP---LTGFNPLPKPTNNVPYKGQVWCVPVEGANETELEETLRMAC 409 Query: 539 GPGNVDCSAIQP 504 N C+A+ P Sbjct: 410 AQSNTTCAALAP 421
>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 484 Score = 47.4 bits (111), Expect = 4e-05 Identities = 25/60 (41%), Positives = 33/60 (55%) Frame = -2 Query: 475 LVSHASYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLYMAAGSKISTKNSTTSPA 296 L + SYAFNSYYQ + D AC F G + +T+DPS +C + KI K+ S A Sbjct: 406 LAQNVSYAFNSYYQVSNQLDSACKFPGLSIVSTRDPSVGSCKF-----KIMIKSEDASEA 460
>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)| Length = 546 Score = 40.4 bits (93), Expect = 0.005 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 10/84 (11%) Frame = -2 Query: 496 PCYQPDTLVSHASYAFNSYYQQNGATDVACGFGG-AGMRTTKDPSYDTCLYMAAGSK--- 329 PC+ D L S+ N YY+QN + AC FGG A +++ K S + +AGS Sbjct: 421 PCHSKDKL----SFVMNLYYEQNKESKSACDFGGSASLQSAKTASSCSAYLSSAGSSGLG 476 Query: 328 -----ISTKNS-TTSPARSGSSPS 275 + T S +TS + SGSS S Sbjct: 477 TVSGTVRTDTSQSTSDSGSGSSSS 500
>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 477 Score = 39.7 bits (91), Expect = 0.009 Identities = 19/38 (50%), Positives = 20/38 (52%) Frame = -2 Query: 460 SYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLY 347 SYAFNSYYQ D AC F T DPS TC + Sbjct: 408 SYAFNSYYQIQDQLDTACKFPNISEVTKTDPSTGTCRF 445
>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)| Length = 548 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%) Frame = -2 Query: 460 SYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLYM-------AAGSKISTKNSTTS 302 SY N YY AC F G+ +K + +C + A+ S S+K+ ++S Sbjct: 439 SYVLNQYYLDQDKKSSACDFKGSASINSKASASGSCKAVSGVATGKASSSGGSSKSGSSS 498 Query: 301 PARSGSSPS 275 + SGSS S Sbjct: 499 ASASGSSSS 507
>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal| development 2) Length = 549 Score = 30.8 bits (68), Expect = 4.1 Identities = 19/62 (30%), Positives = 24/62 (38%) Frame = -2 Query: 460 SYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLYMAAGSKISTKNSTTSPARSGSS 281 SY N YY AC F G+ + +C AAG + +S R GSS Sbjct: 439 SYVLNQYYHDQNERADACDFAGSASINDNASASTSC--SAAGGRGLQSGRRSSTTRGGSS 496 Query: 280 PS 275 S Sbjct: 497 SS 498
>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal| development 1) Length = 549 Score = 30.4 bits (67), Expect = 5.4 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 10/84 (11%) Frame = -2 Query: 496 PCYQPDTLVSHASYAFNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLYMAA------- 338 PC D L S+ N YY++ + AC F G+ + + Y+++ Sbjct: 419 PCGAKDKL----SFVLNLYYEEQNESKSACDFSGSASLQSASTASSCAAYLSSAGVSGLG 474 Query: 337 ---GSKISTKNSTTSPARSGSSPS 275 GS + + T+ + SGSS S Sbjct: 475 TVQGSVRTDTSEATTDSGSGSSNS 498
>TRPD_BACSU (P03947) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 338 Score = 29.6 bits (65), Expect = 9.2 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = -2 Query: 430 NGATDVA--CGFGGAGMRTTKDPSYDTCLYMAAGSKISTKNSTTSPARSGSSPSL 272 +G D+ CG GG G+ T + + AAG+KI+ + + ++SGS+ L Sbjct: 68 DGLPDIVDTCGTGGDGISTFNISTASAIVASAAGAKIAKHGNRSVSSKSGSADVL 122
>TCF20_MOUSE (Q9EPQ8) Transcription factor 20 (Stromelysin 1 PDGF-responsive| element-binding protein) (SPRE-binding protein) (Nuclear factor SPBP) Length = 1983 Score = 29.6 bits (65), Expect = 9.2 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 5/67 (7%) Frame = -2 Query: 499 QPCYQPDTLVSHASYA-----FNSYYQQNGATDVACGFGGAGMRTTKDPSYDTCLYMAAG 335 QP +P TL S A Y F +YQ + ++ + F + SYD + AG Sbjct: 222 QPMQRPSTLPSSAGYQLRVGQFGQHYQSSASSSSSSSFPSPQRFSQSGQSYDGSYSVNAG 281 Query: 334 SKISTKN 314 S+ N Sbjct: 282 SQYEGHN 288 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 110,688,516 Number of Sequences: 219361 Number of extensions: 2413778 Number of successful extensions: 7121 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 6748 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7119 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
