ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9e22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK063960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 1e-79
2ref|NM_191138.1| Oryza sativa (japonica cultivar-group), predic... 299 6e-78
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
4dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
5gb|AY106336.1| Zea mays PCO109207 mRNA sequence 212 1e-51
6gb|DQ412569.1| Medicago sativa beta-1,3-glucanase gene, complete... 58 4e-05
7gb|DQ412568.1| Medicago sativa beta-1,3-glucanase mRNA, complete... 58 4e-05
8gb|BT012937.1| Lycopersicon esculentum clone 114105F, mRNA sequence 48 0.039
9ref|NM_126224.1| Arabidopsis thaliana hydrolase, hydrolyzing O-g... 44 0.61
10gb|AC006069.3| Arabidopsis thaliana chromosome 2 clone T8O11 map... 44 0.61
11emb|BX819636.1|CNS0AADX Arabidopsis thaliana Full-length cDNA Co... 44 0.61
12emb|BX819571.1|CNS0AAE3 Arabidopsis thaliana Full-length cDNA Co... 44 0.61
13gb|AY085500.1| Arabidopsis thaliana clone 154469 mRNA, complete ... 44 0.61
14gb|BT012815.1| Lycopersicon esculentum clone 113859R, mRNA sequence 42 2.4
15ref|XM_533156.2| PREDICTED: Canis familiaris similar to CD59 ant... 42 2.4
16gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete s... 42 2.4
17emb|AL450992.17| Human DNA sequence from clone RP11-139D23 on ch... 42 2.4
18gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete ... 42 2.4
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
20dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
21emb|AL772402.5| Mouse DNA sequence from clone RP23-65J9 on chrom... 42 2.4
22ref|NM_125194.3| Arabidopsis thaliana hydrolase, hydrolyzing O-g... 40 9.6
23gb|AC115844.7| Mus musculus chromosome 15, clone RP24-240I3, com... 40 9.6
24ref|XM_481631.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.6
25gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 9.6
26gb|AC005600.1| Homo sapiens chromosome 16, P1 clone 109-9G (LANL... 40 9.6
27gb|AC123735.6| Mus musculus chromosome 15, clone RP23-478A10, co... 40 9.6
28gb|AC113323.12| Mus musculus chromosome 15, clone RP23-451O9, co... 40 9.6
29gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, comp... 40 9.6
30ref|XM_870235.1| PREDICTED: Bos taurus similar to Mdm2, transfor... 40 9.6
31gb|AC123640.9| Mus musculus chromosome 15, clone RP23-11D17, com... 40 9.6
32gb|AC002410.2| Homo sapiens BAC clone CTA-264L19 from 7, complet... 40 9.6
33gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, com... 40 9.6
34emb|CR962127.1| Medicago truncatula chromosome 5 clone mth2-181n... 40 9.6
35gb|AC146856.8| Medicago truncatula clone mth2-16l23, complete se... 40 9.6
36emb|Z84466.2|HS230G1 Human DNA sequence from clone RP1-230G1 on ... 40 9.6
37emb|AL160033.21| Human DNA sequence from clone RP11-480K16 on ch... 40 9.6
38gb|BT000612.1| Arabidopsis thaliana beta-1,3 glucanase-like prot... 40 9.6
39emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 9.6
40gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, com... 40 9.6
41gb|AC158172.17| Medicago truncatula clone mth2-143b6, complete s... 40 9.6
42gb|AC006429.4| Arabidopsis thaliana chromosome 2 clone F15K19 ma... 40 9.6
43gb|AC090687.6| Homo sapiens chromosome 8, clone RP11-468A19, com... 40 9.6
44gb|AY058864.1| Arabidopsis thaliana AT5g58090/k21l19_70 mRNA, co... 40 9.6
45dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
46gb|AC154914.3| Pan troglodytes BAC clone RP43-172A19 from chromo... 40 9.6
47gb|AF039745.1|AF039745 Zalophus californianus transthyretin intr... 40 9.6
48gb|AF039744.1|AF039744 Callorhinus ursinus transthyretin intron ... 40 9.6
49gb|AF039743.1|AF039743 Odobenus rosmarus transthyretin intron 1,... 40 9.6
50gb|AF016298.2|AF016298 Rhodobacter sphaeroides autoinducer sythe... 40 9.6
51dbj|BS000169.1| Pan troglodytes chromosome 22 clone:RP43-042E01,... 40 9.6
52dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.6
53dbj|AP004637.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
54dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
55dbj|AK110152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.6
56dbj|AK109514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.6
57emb|CR678465.9| Zebrafish DNA sequence from clone DKEY-234P10 in... 40 9.6 
>dbj|AK063960.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-G07, full
            insert sequence
          Length = 1965

 Score =  305 bits (154), Expect = 1e-79
 Identities = 326/382 (85%), Gaps = 1/382 (0%)
 Strand = Plus / Minus

                                                                        
Query: 311  tgaatttttggtgctaatcttgctgccagctgccatgtaaagacaagtgtcgtaacttgg 370
            ||||||| | ||||| ||||| || || || ||||| |||| ||||||||| ||||||||
Sbjct: 1603 tgaatttgttgtgctcatcttactcccggcagccatataaacacaagtgtcataacttgg 1544

                                                                        
Query: 371  atctttcgtcgtcctcattccagcaccaccaaatccacaagccacatcagtagctccatt 430
            |||||| || |||| || ||||| ||| |||||  ||||||| |||||  ||||||||||
Sbjct: 1543 atctttagttgtccgcactccagtaccgccaaagtcacaagctacatcgttagctccatt 1484

                                                                        
Query: 431  ttgctgataatagctgttgaatgcatatgaagcatgtgaaaccaatgtgtcgggctggta 490
            ||||||||||||||||||||| |||||||||||||||||  ||||||| || ||||||||
Sbjct: 1483 ttgctgataatagctgttgaaggcatatgaagcatgtgatgccaatgtatcaggctggta 1424

                                                                        
Query: 491  gcagggttggctttggttgaatagcagagcaatcgacattgcctggaccgcatgcccagt 550
            |||||| || ||  |||||||||||||||||||| ||||||||||| || |||||||| |
Sbjct: 1423 gcagggctgactc-ggttgaatagcagagcaatcaacattgcctggtccacatgcccaat 1365

                                                                        
Query: 551  tcaagccattctgcagagccgtctcggacacattggttgaagcaacacaccaagtaccat 610
            | || |||||||| ||| | ||||| ||| |||| |  ||||||||||||||||||||||
Sbjct: 1364 ttaaaccattctgtagatctgtctcagacgcattagcagaagcaacacaccaagtaccat 1305

                                                                        
Query: 611  ttgagctcgtaaggtttcctccagtcatgatgtccacatttcctcggccagtccaatcta 670
            |||   | |||| ||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1304 ttgcatttgtaatgtttcctccagtcatgatgtccacattgcctctgccagtccaatcta 1245

                                  
Query: 671  cgctgtagatggagctctggtc 692
              ||||| || ||||| |||||
Sbjct: 1244 gactgtatatagagctttggtc 1223
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>ref|NM_191138.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2295

 Score =  299 bits (151), Expect = 6e-78
 Identities = 302/351 (86%), Gaps = 1/351 (0%)
 Strand = Plus / Minus

                                                                        
Query: 342  gccatgtaaagacaagtgtcgtaacttggatctttcgtcgtcctcattccagcaccacca 401
            ||||| |||| ||||||||| |||||||||||||| || |||| || ||||| ||| |||
Sbjct: 1346 gccatataaacacaagtgtcataacttggatctttagttgtccgcactccagtaccgcca 1287

                                                                        
Query: 402  aatccacaagccacatcagtagctccattttgctgataatagctgttgaatgcatatgaa 461
            ||  ||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1286 aagtcacaagctacatcgttagctccattttgctgataatagctgttgaaggcatatgaa 1227

                                                                        
Query: 462  gcatgtgaaaccaatgtgtcgggctggtagcagggttggctttggttgaatagcagagca 521
            ||||||||  ||||||| || |||||||||||||| || ||  |||||||||||||||||
Sbjct: 1226 gcatgtgatgccaatgtatcaggctggtagcagggctgactc-ggttgaatagcagagca 1168

                                                                        
Query: 522  atcgacattgcctggaccgcatgcccagttcaagccattctgcagagccgtctcggacac 581
            ||| ||||||||||| || |||||||| || || |||||||| ||| | ||||| ||| |
Sbjct: 1167 atcaacattgcctggtccacatgcccaatttaaaccattctgtagatctgtctcagacgc 1108

                                                                        
Query: 582  attggttgaagcaacacaccaagtaccatttgagctcgtaaggtttcctccagtcatgat 641
            ||| |  |||||||||||||||||||||||||   | |||| ||||||||||||||||||
Sbjct: 1107 attagcagaagcaacacaccaagtaccatttgcatttgtaatgtttcctccagtcatgat 1048

                                                               
Query: 642  gtccacatttcctcggccagtccaatctacgctgtagatggagctctggtc 692
            ||||||||| |||| ||||||||||||||  ||||| || ||||| |||||
Sbjct: 1047 gtccacattgcctctgccagtccaatctagactgtatatagagctttggtc 997
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  278 bits (140), Expect = 2e-71
 Identities = 282/328 (85%), Gaps = 1/328 (0%)
 Strand = Plus / Minus

                                                                            
Query: 365      acttggatctttcgtcgtcctcattccagcaccaccaaatccacaagccacatcagtagc 424
                |||||||||||| || |||| || ||||| ||| |||||  ||||||| |||||  ||||
Sbjct: 30892900 acttggatctttagttgtccgcactccagtaccgccaaagtcacaagctacatcgttagc 30892841

                                                                            
Query: 425      tccattttgctgataatagctgttgaatgcatatgaagcatgtgaaaccaatgtgtcggg 484
                ||||||||||||||||||||||||||| |||||||||||||||||  ||||||| || ||
Sbjct: 30892840 tccattttgctgataatagctgttgaaggcatatgaagcatgtgatgccaatgtatcagg 30892781

                                                                            
Query: 485      ctggtagcagggttggctttggttgaatagcagagcaatcgacattgcctggaccgcatg 544
                |||||||||||| || ||  |||||||||||||||||||| ||||||||||| || ||||
Sbjct: 30892780 ctggtagcagggctgactc-ggttgaatagcagagcaatcaacattgcctggtccacatg 30892722

                                                                            
Query: 545      cccagttcaagccattctgcagagccgtctcggacacattggttgaagcaacacaccaag 604
                |||| || || |||||||| ||| | ||||| ||| |||| |  ||||||||||||||||
Sbjct: 30892721 cccaatttaaaccattctgtagatctgtctcagacgcattagcagaagcaacacaccaag 30892662

                                                                            
Query: 605      taccatttgagctcgtaaggtttcctccagtcatgatgtccacatttcctcggccagtcc 664
                |||||||||   | |||| ||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 30892661 taccatttgcatttgtaatgtttcctccagtcatgatgtccacattgcctctgccagtcc 30892602

                                            
Query: 665      aatctacgctgtagatggagctctggtc 692
                ||||||  ||||| || ||||| |||||
Sbjct: 30892601 aatctagactgtatatagagctttggtc 30892574
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>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0638D12
          Length = 161277

 Score =  278 bits (140), Expect = 2e-71
 Identities = 282/328 (85%), Gaps = 1/328 (0%)
 Strand = Plus / Minus

                                                                         
Query: 365   acttggatctttcgtcgtcctcattccagcaccaccaaatccacaagccacatcagtagc 424
             |||||||||||| || |||| || ||||| ||| |||||  ||||||| |||||  ||||
Sbjct: 93267 acttggatctttagttgtccgcactccagtaccgccaaagtcacaagctacatcgttagc 93208

                                                                         
Query: 425   tccattttgctgataatagctgttgaatgcatatgaagcatgtgaaaccaatgtgtcggg 484
             ||||||||||||||||||||||||||| |||||||||||||||||  ||||||| || ||
Sbjct: 93207 tccattttgctgataatagctgttgaaggcatatgaagcatgtgatgccaatgtatcagg 93148

                                                                         
Query: 485   ctggtagcagggttggctttggttgaatagcagagcaatcgacattgcctggaccgcatg 544
             |||||||||||| || ||  |||||||||||||||||||| ||||||||||| || ||||
Sbjct: 93147 ctggtagcagggctgactc-ggttgaatagcagagcaatcaacattgcctggtccacatg 93089

                                                                         
Query: 545   cccagttcaagccattctgcagagccgtctcggacacattggttgaagcaacacaccaag 604
             |||| || || |||||||| ||| | ||||| ||| |||| |  ||||||||||||||||
Sbjct: 93088 cccaatttaaaccattctgtagatctgtctcagacgcattagcagaagcaacacaccaag 93029

                                                                         
Query: 605   taccatttgagctcgtaaggtttcctccagtcatgatgtccacatttcctcggccagtcc 664
             |||||||||   | |||| ||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 93028 taccatttgcatttgtaatgtttcctccagtcatgatgtccacattgcctctgccagtcc 92969

                                         
Query: 665   aatctacgctgtagatggagctctggtc 692
             ||||||  ||||| || ||||| |||||
Sbjct: 92968 aatctagactgtatatagagctttggtc 92941
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>gb|AY106336.1| Zea mays PCO109207 mRNA sequence
          Length = 735

 Score =  212 bits (107), Expect = 1e-51
 Identities = 279/335 (83%), Gaps = 1/335 (0%)
 Strand = Plus / Minus

                                                                       
Query: 354 caagtgtcgtaacttggatctttcgtcgtcctcattccagcaccaccaaatccacaagcc 413
           |||||||| |||||||||||||||||||| |  ||||| ||||| |||||  |||| |||
Sbjct: 358 caagtgtcataacttggatctttcgtcgttcgtattccggcacctccaaagtcacaggcc 299

                                                                       
Query: 414 acatcagtagctccattttgctgataatagctgttgaatgcatatgaagcatgtgaaacc 473
           ||| |  | |||||||||||||| || ||||| |||||||||||||||||||| |||   
Sbjct: 298 acaacgttggctccattttgctggtagtagctattgaatgcatatgaagcatgggaagtt 239

                                                                       
Query: 474 aatgtgtcgggctggtagcagggttggctttggttgaatagcagagcaatcgacattgcc 533
           || ||||| ||||||||||||||||||| |||| || || ||||| ||||| || |||||
Sbjct: 238 aaagtgtccggctggtagcagggttggc-ttggctgtatggcagaacaatctacgttgcc 180

                                                                       
Query: 534 tggaccgcatgcccagttcaagccattctgcagagccgtctcggacacattggttgaagc 593
           |||||| ||||||||||| | | ||||||||||| | || || ||  |||| ||||||||
Sbjct: 179 tggaccacatgcccagttgagggcattctgcagatcagtttctgatgcattagttgaagc 120

                                                                       
Query: 594 aacacaccaagtaccatttgagctcgtaaggtttcctccagtcatgatgtccacatttcc 653
           || |||||| |||||||| |  || |||| |||| |||||||||| |  |||||||| ||
Sbjct: 119 aatacaccaggtaccattagcacttgtaatgtttgctccagtcataacatccacattgcc 60

                                              
Query: 654 tcggccagtccaatctacgctgtagatggagctct 688
           |||||| |||||||| | ||||||||| |||||||
Sbjct: 59  tcggcccgtccaatcaaggctgtagatagagctct 25
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>gb|DQ412569.1| Medicago sativa beta-1,3-glucanase gene, complete cds
          Length = 3706

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 414  acatcagtagctccattttgctgataatagctgttgaatgcatatgaagcatg 466
            ||||||| ||| ||||||||||| |||||||| || || ||||||||||||||
Sbjct: 2730 acatcagaagcaccattttgctggtaatagctattaaaagcatatgaagcatg 2678
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>gb|DQ412568.1| Medicago sativa beta-1,3-glucanase mRNA, complete cds
          Length = 2103

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 414  acatcagtagctccattttgctgataatagctgttgaatgcatatgaagcatg 466
            ||||||| ||| ||||||||||| |||||||| || || ||||||||||||||
Sbjct: 1466 acatcagaagcaccattttgctggtaatagctattaaaagcatatgaagcatg 1414
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>gb|BT012937.1| Lycopersicon esculentum clone 114105F, mRNA sequence
          Length = 1831

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 433  gctgataatagctgttgaatgcatatga 460
            ||||||| ||||||||||||||||||||
Sbjct: 1471 gctgatagtagctgttgaatgcatatga 1444
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>ref|NM_126224.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
            AT2G01630 mRNA, complete cds
          Length = 1931

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 517  gagcaatcgacattgcctggaccgcatgcccagt 550
            ||||||||||| || ||||||||||| |||||||
Sbjct: 1331 gagcaatcgaccttccctggaccgcaagcccagt 1298
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>gb|AC006069.3| Arabidopsis thaliana chromosome 2 clone T8O11 map rga, complete
             sequence
          Length = 89138

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 517   gagcaatcgacattgcctggaccgcatgcccagt 550
             ||||||||||| || ||||||||||| |||||||
Sbjct: 79361 gagcaatcgaccttccctggaccgcaagcccagt 79328
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>emb|BX819636.1|CNS0AADX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB9ZF11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1777

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 517  gagcaatcgacattgcctggaccgcatgcccagt 550
            ||||||||||| || ||||||||||| |||||||
Sbjct: 1306 gagcaatcgaccttccctggaccgcaagcccagt 1273
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>emb|BX819571.1|CNS0AAE3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB90ZD08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1628

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 517  gagcaatcgacattgcctggaccgcatgcccagt 550
            ||||||||||| || ||||||||||| |||||||
Sbjct: 1245 gagcaatcgaccttccctggaccgcaagcccagt 1212
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>gb|AY085500.1| Arabidopsis thaliana clone 154469 mRNA, complete sequence
          Length = 1931

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 517  gagcaatcgacattgcctggaccgcatgcccagt 550
            ||||||||||| || ||||||||||| |||||||
Sbjct: 1331 gagcaatcgaccttccctggaccgcaagcccagt 1298
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>gb|BT012815.1| Lycopersicon esculentum clone 113859R, mRNA sequence
          Length = 1831

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 434  ctgataatagctgttgaatgcatatgaagcatg 466
            |||||||||||| |  |||||||||||||||||
Sbjct: 1357 ctgataatagctatcaaatgcatatgaagcatg 1325
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>ref|XM_533156.2| PREDICTED: Canis familiaris similar to CD59 antigen p18-20
           (LOC475945), mRNA
          Length = 1795

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 220 ggacaatcacaatgggaagca 240
           |||||||||||||||||||||
Sbjct: 157 ggacaatcacaatgggaagca 177
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>gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete sequence
          Length = 92189

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 434   ctgataatagctgttgaatgcatatgaagcatg 466
             |||||||||||| ||||| ||||| ||||||||
Sbjct: 64469 ctgataatagctattgaaagcataggaagcatg 64501
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>emb|AL450992.17| Human DNA sequence from clone RP11-139D23 on chromosome 1 Contains two
              novel genes (FLJ37964), the gene for C-terminal modulator
              protein (CTMP), a keratin 8 (KRT8) pseudogene, the S100A10
              gene for S100 calcium binding protein A10 (annexin II
              ligand, calpactin I, light polypeptide (p11)), the 5' end
              of a novel gene, a novel pseudogene and a CpG island,
              complete sequence
          Length = 185447

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 428    attttgctgataatagctgtt 448
              |||||||||||||||||||||
Sbjct: 115435 attttgctgataatagctgtt 115415
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>gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete sequence
          Length = 94766

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 425   tccattttgctgataatagctgttgaatgcatatgaagcatgtgaaaccaatgtgtc 481
             |||||||  |||||||||||| ||||| ||| | |||||||| |||| || ||||||
Sbjct: 16158 tccatttgtctgataatagctattgaaagcaaaagaagcatgagaaagcagtgtgtc 16214
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 446      gttgaatgcatatgaagcatgtgaaaccaatgtgtcgggctggta 490
                |||||||||||| || |||||||  ||||||||||  ||||||||
Sbjct: 21159721 gttgaatgcataagacgcatgtgcgaccaatgtgtttggctggta 21159765
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>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0696F12
          Length = 165227

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 446   gttgaatgcatatgaagcatgtgaaaccaatgtgtcgggctggta 490
             |||||||||||| || |||||||  ||||||||||  ||||||||
Sbjct: 81082 gttgaatgcataagacgcatgtgcgaccaatgtgtttggctggta 81126
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>emb|AL772402.5| Mouse DNA sequence from clone RP23-65J9 on chromosome 11, complete
             sequence
          Length = 242502

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 388   ttccagcaccaccaaatccac 408
             |||||||||||||||||||||
Sbjct: 31855 ttccagcaccaccaaatccac 31835
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>ref|NM_125194.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
            AT5G58090 mRNA, complete cds
          Length = 1719

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 434  ctgataatagctgttgaatgcata 457
            ||||||||| ||||||||||||||
Sbjct: 1343 ctgataataactgttgaatgcata 1320
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>gb|AC115844.7| Mus musculus chromosome 15, clone RP24-240I3, complete sequence
          Length = 164109

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    gaatagcatactgcataata 93
             ||||||||||||||||||||
Sbjct: 53526 gaatagcatactgcataata 53545
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>ref|XM_481631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 433  gctgataatagctgttgaatgcatatga 460
            ||||||| ||||||||||| ||||||||
Sbjct: 1497 gctgatagtagctgttgaaagcatatga 1470
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 279     ggactggagccgcttcgagc 298
               ||||||||||||||||||||
Sbjct: 1836711 ggactggagccgcttcgagc 1836730
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>gb|AC005600.1| Homo sapiens chromosome 16, P1 clone 109-9G (LANL), complete sequence
          Length = 79586

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   cccagttcaagccattctgc 564
             ||||||||||||||||||||
Sbjct: 36110 cccagttcaagccattctgc 36129
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>gb|AC123735.6| Mus musculus chromosome 15, clone RP23-478A10, complete sequence
          Length = 171298

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 107    acctttcatcactcatcagaacat 130
              |||||||||| |||||||||||||
Sbjct: 129406 acctttcatccctcatcagaacat 129383
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>gb|AC113323.12| Mus musculus chromosome 15, clone RP23-451O9, complete sequence
          Length = 175138

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     gaatagcatactgcataata 93
              ||||||||||||||||||||
Sbjct: 135271 gaatagcatactgcataata 135290
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>gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, complete sequence
          Length = 176410

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 620    taaggtttcctccagtcatg 639
              ||||||||||||||||||||
Sbjct: 109452 taaggtttcctccagtcatg 109433
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>ref|XM_870235.1| PREDICTED: Bos taurus similar to Mdm2, transformed 3T3 cell double
            minute 2, p53 binding protein binding protein
            (LOC617904), mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  agaaagcctaggacaatcac 229
            ||||||||||||||||||||
Sbjct: 1141 agaaagcctaggacaatcac 1160
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>gb|AC123640.9| Mus musculus chromosome 15, clone RP23-11D17, complete sequence
          Length = 219106

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 107    acctttcatcactcatcagaacat 130
              |||||||||| |||||||||||||
Sbjct: 164163 acctttcatccctcatcagaacat 164186
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>gb|AC002410.2| Homo sapiens BAC clone CTA-264L19 from 7, complete sequence
          Length = 96217

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   cagggttggctttggttgaa 511
             ||||||||||||||||||||
Sbjct: 92806 cagggttggctttggttgaa 92787
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>gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, complete sequence
          Length = 72483

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   cccagttcaagccattctgc 564
             ||||||||||||||||||||
Sbjct: 31667 cccagttcaagccattctgc 31648
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>emb|CR962127.1| Medicago truncatula chromosome 5 clone mth2-181n9, COMPLETE SEQUENCE
          Length = 119528

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 447   ttgaatgcatatgaagcatgtgaaaccaatgt 478
             ||||||||||| |||||||| | |||||||||
Sbjct: 99733 ttgaatgcataagaagcatgagcaaccaatgt 99764
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>gb|AC146856.8| Medicago truncatula clone mth2-16l23, complete sequence
          Length = 145382

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 447   ttgaatgcatatgaagcatgtgaaaccaatgt 478
             ||||||||||| |||||||| | |||||||||
Sbjct: 23180 ttgaatgcataagaagcatgagcaaccaatgt 23211
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>emb|Z84466.2|HS230G1 Human DNA sequence from clone RP1-230G1 on chromosome Xp11.3 Contains
             5'UTR of the ZNF41 gene for zinc finger protein 41, a
             novel gene (LOC203414), a chromosome 6 open reading frame
             68 pseudogene (LOC286402), the ARAF1 gene for v-raf murine
             sarcoma 3611 viral oncogene homolog 1, the 3' end of the
             SYN1 gene for synapsin I, the TIMP1 gene for tissue
             inhibitor of metalloproteinase 1 (erythroid potentiating
             activity, collagenase inhibitor) and five CpG islands,
             complete sequence
          Length = 125517

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   cccagttcaagccattctgc 564
             ||||||||||||||||||||
Sbjct: 96055 cccagttcaagccattctgc 96036
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>emb|AL160033.21| Human DNA sequence from clone RP11-480K16 on chromosome 13 Contains the
             5' end of a novel gene, a novel gene, the 3' end of the
             TUBGCP3 gene for tubulin gamma complex associated protein
             3 and two CpG islands, complete sequence
          Length = 182362

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   gctggagaggtggttgaatt 316
             ||||||||||||||||||||
Sbjct: 52380 gctggagaggtggttgaatt 52361
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>gb|BT000612.1| Arabidopsis thaliana beta-1,3 glucanase-like protein
            (At5g58090/k21l19_70) mRNA, complete cds
          Length = 1434

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 434  ctgataatagctgttgaatgcata 457
            ||||||||| ||||||||||||||
Sbjct: 1248 ctgataataactgttgaatgcata 1225
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 247   gcagcagggtgcggcactgggccagcag 274
             |||||||||||||||  |||||||||||
Sbjct: 52651 gcagcagggtgcggccgtgggccagcag 52624
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>gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, complete sequence
          Length = 124497

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 501    ctttggttgaatagcagagc 520
              ||||||||||||||||||||
Sbjct: 114162 ctttggttgaatagcagagc 114181
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>gb|AC158172.17| Medicago truncatula clone mth2-143b6, complete sequence
          Length = 117641

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   gagaggtggttgaatttttggtgc 324
             ||||| ||||||||||||||||||
Sbjct: 71487 gagagttggttgaatttttggtgc 71464
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>gb|AC006429.4| Arabidopsis thaliana chromosome 2 clone F15K19 map mi421, complete
             sequence
          Length = 94875

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gtggttgaatttttggtgct 325
             ||||||||||||||||||||
Sbjct: 73777 gtggttgaatttttggtgct 73758
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>gb|AC090687.6| Homo sapiens chromosome 8, clone RP11-468A19, complete sequence
          Length = 150735

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 501    ctttggttgaatagcagagc 520
              ||||||||||||||||||||
Sbjct: 149026 ctttggttgaatagcagagc 149007
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>gb|AY058864.1| Arabidopsis thaliana AT5g58090/k21l19_70 mRNA, complete cds
          Length = 1589

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 434  ctgataatagctgttgaatgcata 457
            ||||||||| ||||||||||||||
Sbjct: 1327 ctgataataactgttgaatgcata 1304
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 433      gctgataatagctgttgaatgcatatga 460
                ||||||| ||||||||||| ||||||||
Sbjct: 14346725 gctgatagtagctgttgaaagcatatga 14346698
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>gb|AC154914.3| Pan troglodytes BAC clone RP43-172A19 from chromosome 7, complete
             sequence
          Length = 154883

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   cagggttggctttggttgaa 511
             ||||||||||||||||||||
Sbjct: 25503 cagggttggctttggttgaa 25484
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>gb|AF039745.1|AF039745 Zalophus californianus transthyretin intron 1, partial sequence
          Length = 1034

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 aagcacagggagcagcaggg 255
           ||||||||||||||||||||
Sbjct: 943 aagcacagggagcagcaggg 924
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>gb|AF039744.1|AF039744 Callorhinus ursinus transthyretin intron 1, partial sequence
          Length = 1040

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 aagcacagggagcagcaggg 255
           ||||||||||||||||||||
Sbjct: 949 aagcacagggagcagcaggg 930
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>gb|AF039743.1|AF039743 Odobenus rosmarus transthyretin intron 1, partial sequence
          Length = 1038

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 aagcacagggagcagcaggg 255
           ||||||||||||||||||||
Sbjct: 948 aagcacagggagcagcaggg 929
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>gb|AF016298.2|AF016298 Rhodobacter sphaeroides autoinducer sythesis regulator (cerR),
           autoinducer synthase (cerI), OpgG, and OpgC genes,
           complete cds; and unknown genes
          Length = 7950

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 279 ggactggagccgcttcgagc 298
           ||||||||||||||||||||
Sbjct: 959 ggactggagccgcttcgagc 978
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>dbj|BS000169.1| Pan troglodytes chromosome 22 clone:RP43-042E01, map 22, complete
              sequences
          Length = 228269

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 545    cccagttcaagccattctgc 564
              ||||||||||||||||||||
Sbjct: 137343 cccagttcaagccattctgc 137324
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>dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L19
          Length = 41087

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   ctgataatagctgttgaatgcata 457
             ||||||||| ||||||||||||||
Sbjct: 19957 ctgataataactgttgaatgcata 19980
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>dbj|AP004637.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0703C03
          Length = 162620

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 433    gctgataatagctgttgaatgcatatga 460
              ||||||| ||||||||||| ||||||||
Sbjct: 162281 gctgatagtagctgttgaaagcatatga 162254
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>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1136_A10
          Length = 101249

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 433   gctgataatagctgttgaatgcatatga 460
             ||||||| ||||||||||| ||||||||
Sbjct: 49805 gctgatagtagctgttgaaagcatatga 49778
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>dbj|AK110152.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-E06, full
            insert sequence
          Length = 3155

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 230  aatgggaagcacagggagcagcagggtgcggc 261
            |||||||||||| | ||||||||| |||||||
Sbjct: 2581 aatgggaagcacggcgagcagcagcgtgcggc 2612
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>dbj|AK109514.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A05, full
            insert sequence
          Length = 2110

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 433  gctgataatagctgttgaatgcatatga 460
            ||||||| ||||||||||| ||||||||
Sbjct: 1497 gctgatagtagctgttgaaagcatatga 1470
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>emb|CR678465.9| Zebrafish DNA sequence from clone DKEY-234P10 in linkage group 19,
             complete sequence
          Length = 82040

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 226   tcacaatgggaagcacagggagcagcag 253
             |||||||||||||||  |||||||||||
Sbjct: 57819 tcacaatgggaagcagcgggagcagcag 57846


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,015,602
Number of Sequences: 3902068
Number of extensions: 6015602
Number of successful extensions: 109552
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109351
Number of HSP's gapped (non-prelim): 196
length of query: 698
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 675
effective length of database: 17,143,297,704
effective search space: 11571725950200
effective search space used: 11571725950200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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