Clone Name | rbags9e21 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FOXO1_HUMAN (Q12778) Forkhead box protein O1A (Forkhead in rhabd... | 31 | 1.8 | 2 | FOXO1_MOUSE (Q9R1E0) Forkhead box protein O1A (Forkhead in rhabd... | 29 | 5.2 | 3 | YAET_PHOLL (Q7N8N9) Outer membrane protein assembly factor yaeT ... | 29 | 5.2 | 4 | CLD1_MOUSE (O88551) Claudin-1 | 28 | 8.9 |
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>FOXO1_HUMAN (Q12778) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)| Length = 655 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = +2 Query: 32 PSIKQTALHHIKMLSSPTSLIISCISRLGTAVQTSFTSRSAEPN 163 P + L ++ +LSSPTSL +S S GT +Q + A PN Sbjct: 368 PENMENLLDNLNLLSSPTSLTVSTQSSPGTMMQQTPCYSFAPPN 411
>FOXO1_MOUSE (Q9R1E0) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)| Length = 652 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 32 PSIKQTALHHIKMLSSPTSLIISCISRLGTAVQTSFTSRSAEPN 163 P + L ++ +LSSPTSL +S S G+ +Q + A PN Sbjct: 365 PENMENLLDNLNLLSSPTSLTVSTQSSPGSMMQQTPCYSFAPPN 408
>YAET_PHOLL (Q7N8N9) Outer membrane protein assembly factor yaeT precursor| Length = 797 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 231 IGDVFDKNIIRPLGRSTELIHYKLGSALLEVKLVWTAVPRREI 103 IG+ D+ ++ + R E +Y +G VK V T +PR + Sbjct: 121 IGEALDRTMLSNIERGLEDFYYSVGKYNASVKAVVTPLPRNRV 163
>CLD1_MOUSE (O88551) Claudin-1| Length = 211 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = -1 Query: 414 DRVVSQELSPLLPKN--YEYGMELYNGW 337 +R+V + PL P N YE+G L+ GW Sbjct: 142 NRIVQEFYDPLTPINARYEFGQALFTGW 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,334,516 Number of Sequences: 219361 Number of extensions: 1344848 Number of successful extensions: 3495 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3430 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3491 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)