Clone Information

BLAST Search Result

Clone Name	rbags9e19
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)	313	3e-85
2	RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)	292	7e-79
3	RS3A_HELAN (P49198) 40S ribosomal protein S3a	291	9e-79
4	RS3A_ARATH (Q42262) 40S ribosomal protein S3a	283	3e-76
5	RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific ...	273	3e-73
6	RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a	235	1e-61
7	RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a	218	2e-56
8	RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformat...	216	4e-56
9	RS3A_XENTR (Q642T2) 40S ribosomal protein S3a	216	7e-56
10	RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a	216	7e-56
11	RS3A_XENLA (Q801S3) 40S ribosomal protein S3a	215	1e-55
12	RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)	215	1e-55
13	RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a	214	1e-55
14	RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a	214	1e-55
15	RS3A_HUMAN (P61247) 40S ribosomal protein S3a	214	1e-55
16	RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a	214	1e-55
17	RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)	214	1e-55
18	RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformatio...	214	2e-55
19	RS3A_MOUSE (P97351) 40S ribosomal protein S3a	214	2e-55
20	RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a	213	3e-55
21	RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)	211	2e-54
22	RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich prote...	211	2e-54
23	RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)	210	4e-54
24	RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)	205	9e-53
25	RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)	199	6e-51
26	RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)	199	6e-51
27	RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)	188	1e-47
28	RS3A_CAEEL (P48154) 40S ribosomal protein S3a	186	6e-47
29	RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)	181	1e-45
30	RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae	79	1e-14
31	RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae	79	1e-14
32	RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae	78	3e-14
33	RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae	77	4e-14
34	RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae	77	5e-14
35	RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae	77	6e-14
36	RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae	76	1e-13
37	RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae	73	9e-13
38	RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae	71	3e-12
39	RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae	70	4e-12
40	RS3A_METTH (O27630) 30S ribosomal protein S3Ae	69	2e-11
41	RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae	67	6e-11
42	RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae	65	2e-10
43	RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae	64	5e-10
44	RS3A_METJA (P54059) 30S ribosomal protein S3Ae	59	1e-08
45	RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae	57	5e-08
46	RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae	56	9e-08
47	RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae	55	3e-07
48	RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae	45	2e-04
49	RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae	43	8e-04
50	RPOB_STRCO (Q9L0L0) DNA-directed RNA polymerase beta chain (EC 2...	30	8.7
51	PGK_MYCMS (P62415) Phosphoglycerate kinase (EC 2.7.2.3)	30	8.7
52	RPOB_STRAW (Q82DQ5) DNA-directed RNA polymerase beta chain (EC 2...	30	8.7

>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 261

 Score =  313 bits (802), Expect = 3e-85
 Identities = 160/181 (88%), Positives = 168/181 (92%), Gaps = 1/181 (0%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           KIRLRAE VQG NVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD YMLR+F IGF
Sbjct: 82  KIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TKRRPNQVKRTCYAQASQIRQIRRKMVEIM NQA+SCDLKELV+KFIPEVIGKEIEKATS
Sbjct: 142 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATS 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVAAA 137
           SIFPLQNV+VRKVKILKAPKFDLGKLMEVHGDY KED+G KLDRP  DE + G +EVAAA
Sbjct: 202 SIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEAMAG-QEVAAA 260

Query: 136 E 134
           E
Sbjct: 261 E 261

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>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 259

 Score =  292 bits (747), Expect = 7e-79
 Identities = 144/178 (80%), Positives = 157/178 (88%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           KIRLRAE +QG NVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y LRMF IGF
Sbjct: 82  KIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ KRTCYAQ+SQIRQIRRKM EIMVNQA SCDLK+LV KFIPE IG+EIEKATS
Sbjct: 142 TKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKATS 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAA 140
           SI+PLQNV++RKVKILKAPKFDLGKLMEVHGDY ED+G KLDRP  + V    E + A
Sbjct: 202 SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDIGTKLDRPAEEAVAEPTEVIGA 259

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>RS3A_HELAN (P49198) 40S ribosomal protein S3a|
          Length = 259

 Score =  291 bits (746), Expect = 9e-79
 Identities = 146/179 (81%), Positives = 159/179 (88%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           KIRLRAE VQG NVLTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ LRMF IGF
Sbjct: 82  KIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQVKRTCYAQ+SQI+QIRRKM EIMV QA +CDLKELV KFIPE IG+EIEKATS
Sbjct: 142 TKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKATS 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAAA 137
           SI+PLQNV++RKVKILKAPKFD+GKLMEVHGDY EDVGVKLDRP  +E  P A EV  A
Sbjct: 202 SIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRP-AEEAAPEATEVIGA 259

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>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score =  283 bits (724), Expect = 3e-76
 Identities = 142/180 (78%), Positives = 155/180 (86%), Gaps = 1/180 (0%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           KIRLRAE VQG NVLT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Y LRMF I F
Sbjct: 82  KIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TKRR NQVKRTCYAQ+SQIRQIRRKM EIMV +A+SCDLKELV KFIPE IG+EIEKAT 
Sbjct: 142 TKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVAAA 137
            I+PLQNV++RKVKILKAPKFDLGKLMEVHGDY  EDVGVK+DRP  + ++    E+  A
Sbjct: 202 GIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEIIGA 261

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>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score =  273 bits (698), Expect = 3e-73
 Identities = 141/181 (77%), Positives = 155/181 (85%), Gaps = 2/181 (1%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           KIRLRAE VQG NVLT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNY LR+F I F
Sbjct: 82  KIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCIAF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMV-NQAASCDLKELVNKFIPEVIGKEIEKAT 317
           TKRR NQVKRTCYAQ+SQIRQIR KM EIM+  +A+SCDLKELV KFIPE IGK+IEKAT
Sbjct: 142 TKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEKAT 201

Query: 316 SSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVAA 140
             I+PLQNV++RKVKILKAPKFDL KLMEVHGDY  EDVGVK+DRP  DEV+    E+  
Sbjct: 202 QGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRP-ADEVVEEPTEIIG 260

Query: 139 A 137
           A
Sbjct: 261 A 261

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>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a|
          Length = 247

 Score =  235 bits (599), Expect = 1e-61
 Identities = 120/162 (74%), Positives = 138/162 (85%), Gaps = 1/162 (0%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           KI+LRAE VQG NVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDNY +R+F I F
Sbjct: 81  KIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCIAF 140

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEK-AT 317
           TK+RPN   R  YAQ+SQI  IRRKM EIMV +A +CDLKELV KFIPEVIGKEI++  +
Sbjct: 141 TKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWRS 198

Query: 316 SSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 191
             I+PLQ+ ++RKVKILKAPKFDL KLMEVHGDY E+VG K+
Sbjct: 199 QGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 240

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>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a|
          Length = 265

 Score =  218 bits (554), Expect = 2e-56
 Identities = 107/177 (60%), Positives = 135/177 (76%), Gaps = 9/177 (5%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TKRR NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKRRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPDGDE 170
           SI+PL +VYVRKVK+LK PKF+LGKLME+HG+           +D G K++R DG E
Sbjct: 202 SIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKVERADGYE 258

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>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector|
           protein)
          Length = 265

 Score =  216 bits (551), Expect = 4e-56
 Identities = 106/177 (59%), Positives = 135/177 (76%), Gaps = 9/177 (5%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQV++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ +GK+IEKA  
Sbjct: 142 TKKRNNQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPDGDE 170
           SI+PL +VYVRKVK+LK PKF+LGKLME+HG+           +D G K++R DG E
Sbjct: 202 SIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVERADGYE 258

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>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a|
          Length = 263

 Score =  216 bits (549), Expect = 7e-56
 Identities = 105/175 (60%), Positives = 135/175 (77%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 170
           SI+PL +VYVRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERADGYE 256

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>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a|
          Length = 266

 Score =  216 bits (549), Expect = 7e-56
 Identities = 105/178 (58%), Positives = 135/178 (75%), Gaps = 10/178 (5%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ +GK+IEKA  
Sbjct: 142 TKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD----------YKEDVGVKLDRPDGDE 170
           SI+PL +VYVRKVK+LK PKF+LGKLME+HG+           + D G K++R DG E
Sbjct: 202 SIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERADGYE 259

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>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a|
          Length = 263

 Score =  215 bits (547), Expect = 1e-55
 Identities = 105/175 (60%), Positives = 134/175 (76%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKKRNNQIRKTSYAQHQQVRQIRKKMFEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 170
           SI+PL +VYVRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVERADGYE 256

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>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)|
          Length = 263

 Score =  215 bits (547), Expect = 1e-55
 Identities = 105/175 (60%), Positives = 135/175 (77%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTGEFQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 170
           SI+PL +VYVRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVERADGYE 256

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>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a|
          Length = 263

 Score =  214 bits (546), Expect = 1e-55
 Identities = 104/175 (59%), Positives = 134/175 (76%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KMVEIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 170
           SI+PL +VYVRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVERADGYE 256

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>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a|
          Length = 263

 Score =  214 bits (546), Expect = 1e-55
 Identities = 104/175 (59%), Positives = 135/175 (77%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 170
           SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256

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>RS3A_HUMAN (P61247) 40S ribosomal protein S3a|
          Length = 263

 Score =  214 bits (546), Expect = 1e-55
 Identities = 104/175 (59%), Positives = 135/175 (77%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 170
           SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256

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>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a|
          Length = 263

 Score =  214 bits (546), Expect = 1e-55
 Identities = 104/175 (59%), Positives = 135/175 (77%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 170
           SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256

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>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)|
          Length = 260

 Score =  214 bits (546), Expect = 1e-55
 Identities = 104/175 (59%), Positives = 135/175 (77%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 79  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 138

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 139 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 198

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 170
           SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 199 SIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 253

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>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector|
           protein) [Contains: 40S ribosomal protein S3b]
          Length = 263

 Score =  214 bits (545), Expect = 2e-55
 Identities = 104/175 (59%), Positives = 135/175 (77%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 170
           SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYE 256

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>RS3A_MOUSE (P97351) 40S ribosomal protein S3a|
          Length = 263

 Score =  214 bits (545), Expect = 2e-55
 Identities = 104/175 (59%), Positives = 135/175 (77%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  
Sbjct: 142 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 170
           SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYE 256

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>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a|
          Length = 263

 Score =  213 bits (543), Expect = 3e-55
 Identities = 103/175 (58%), Positives = 135/175 (77%), Gaps = 7/175 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L  E VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GF
Sbjct: 82  KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK++EKA  
Sbjct: 142 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDMEKACQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 170
           SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 202 SIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256

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>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)|
          Length = 255

 Score =  211 bits (537), Expect = 2e-54
 Identities = 101/171 (59%), Positives = 139/171 (81%), Gaps = 1/171 (0%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           KI+LR + VQG N+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR+FAI F
Sbjct: 82  KIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TKR+PNQ+K T YAQ+S++R+ R+KM+EI+  + ++C L +L +K IPEVIG+EIEK+T 
Sbjct: 142 TKRQPNQIKETTYAQSSKLREARKKMIEIIEREVSNCTLAQLTSKLIPEVIGREIEKSTQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-YKEDVGVKLDRPDGDEVI 164
           +IFPLQNV++RKVK+LK PKFD G L+ +HG+   E+ G K+     D V+
Sbjct: 202 TIFPLQNVHIRKVKLLKQPKFDWGSLLALHGEGSTEEKGKKVSSGFKDVVL 252

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>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)|
          Length = 264

 Score =  211 bits (537), Expect = 2e-54
 Identities = 106/176 (60%), Positives = 135/176 (76%), Gaps = 8/176 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L AE VQG NVLTNF GM  T DKL S+V+KWQTLIEA+VDVKTTD Y+LR+FAIGF
Sbjct: 82  KFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAIGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+R NQVK+TCYAQ +Q++ IR+KMVEI+  + +S D+KE+VNK IP+ IGK+IEK+  
Sbjct: 142 TKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSCQ 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 170
            I+PL +V + KVK+LK PKFD+GKLME+HG+           + G K+DR DG E
Sbjct: 202 GIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDRVDGYE 257

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>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)|
          Length = 251

 Score =  210 bits (534), Expect = 4e-54
 Identities = 103/161 (63%), Positives = 130/161 (80%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K++LR E +QG + LT+F G+  T+DKLRSLVRKWQT IEA   +KTTD Y+ R+F IGF
Sbjct: 82  KVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVIGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T+RR NQVK+T YAQ+SQIR IR+KM +++ NQ +SC ++ELV K IPEVIG+EIE+AT 
Sbjct: 142 TRRRANQVKKTTYAQSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEVIGREIERATG 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 191
           SIFPLQNV VRKVKILKAPK D  KL+E+HG+  +DVG K+
Sbjct: 202 SIFPLQNVLVRKVKILKAPKHDAQKLLELHGE-SQDVGTKV 241

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>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)|
          Length = 251

 Score =  205 bits (522), Expect = 9e-53
 Identities = 101/161 (62%), Positives = 129/161 (80%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K++LR E +QG + LT+F G D T+DKLRSLVRKWQ+ IEA+  +KTTD Y+ R+F IGF
Sbjct: 82  KVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVIGF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T RR NQVK+T YAQ+SQIR I +KM +++ NQA  C +KELV K IPEVIG+ IEKAT+
Sbjct: 142 TSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKATN 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 191
           +I+PLQNV+VRKVKILKAPK D  KL+E+HG+  +DVG K+
Sbjct: 202 NIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 241

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>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)|
          Length = 254

 Score =  199 bits (506), Expect = 6e-51
 Identities = 96/152 (63%), Positives = 123/152 (80%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K++LR + VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI F
Sbjct: 82  KVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T+++ NQVKR  YAQ+S IR IR+ + EI+  +  +  L +L +K IPEVI KEIE AT 
Sbjct: 142 TRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATK 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 218
            IFPLQN++VRKVK+LK PKFD+G LM +HG+
Sbjct: 202 DIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233

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>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)|
          Length = 254

 Score =  199 bits (506), Expect = 6e-51
 Identities = 97/152 (63%), Positives = 122/152 (80%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           KI+LR + VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI F
Sbjct: 82  KIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAF 141

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T+++ NQVKR  YAQ+S IR IR+ + EI+  +     L +L +K IPEVI KEIE AT 
Sbjct: 142 TRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATK 201

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 218
            IFPLQN++VRKVK+LK PKFD+G LM +HG+
Sbjct: 202 DIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233

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>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)|
          Length = 267

 Score =  188 bits (477), Expect = 1e-47
 Identities = 93/176 (52%), Positives = 122/176 (69%), Gaps = 8/176 (4%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K RL AE VQ  NVL NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+LR+F IGF
Sbjct: 85  KFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGF 144

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T +     ++TCYAQ SQ+R+IR +M +I+ N+ +  DLK+LVNK   + I K+IEK+  
Sbjct: 145 TAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQ 204

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 170
            I+PL +VY+RKVK+LK P+FD+ KL+E+HGD             G  +DRP+G E
Sbjct: 205 RIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 260

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>RS3A_CAEEL (P48154) 40S ribosomal protein S3a|
          Length = 256

 Score =  186 bits (472), Expect = 6e-47
 Identities = 95/170 (55%), Positives = 121/170 (71%), Gaps = 2/170 (1%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L AE VQG NVLTNF  M  T DKL S+V+KW TLIEA+  VKTTD Y LR+F I F
Sbjct: 80  KFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAF 139

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           TK+  NQVK+T Y + S+IR+IR +M+  +  +   CDLKE+V+K IP+ IGK+IEK  S
Sbjct: 140 TKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCS 199

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--YKEDVGVKLDRPDGDE 170
            ++PLQ VY+RKVKI+K PK DLG+L ++HGD       G K+DRPD  E
Sbjct: 200 KLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGDSITVGADGEKVDRPDDYE 249

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>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)|
          Length = 268

 Score =  181 bits (460), Expect = 1e-45
 Identities = 89/152 (58%), Positives = 111/152 (73%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K +L AE V G +VLTNF GM  TTDKLRS+V KWQTLIE  VDVKTTD +MLR+F IGF
Sbjct: 85  KFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCIGF 144

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T +     ++TCYAQ SQI+ IR KM  I+  +  S DLK +V K +P+ I K+IEKA  
Sbjct: 145 TIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQ 204

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 218
            ++PL +VY+RKVK+LK P+FDL  LME+HGD
Sbjct: 205 VVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 236

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>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 47/140 (33%), Positives = 71/140 (50%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+  +   V+G N  T F GM      +RSLVR+  T I+   ++ T D Y LR+ A+  
Sbjct: 65  KLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAI 124

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
             RR          Q SQ R IR+ M EI+  +A   + K+ V + +   I  EI K   
Sbjct: 125 AMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEAK 175

Query: 313 SIFPLQNVYVRKVKILKAPK 254
            I+PL+   +RK+K+L+ P+
Sbjct: 176 KIYPLRKAEIRKIKVLEEPQ 195

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>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 40/139 (28%), Positives = 75/139 (53%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K++ +   V+G+  LT F G++ T D +RSLVRK  + + A  +VKT D  ++R+  +G 
Sbjct: 74  KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T  R    +++          +R+KM+E +V +AA  D  + + + +   +  ++     
Sbjct: 134 TTHRIGTAQKSA---------MRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAK 184

Query: 313 SIFPLQNVYVRKVKILKAP 257
            I P++ V + K+K+LK P
Sbjct: 185 KIAPMRKVEIAKIKVLKYP 203

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>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae|
          Length = 203

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 47/139 (33%), Positives = 77/139 (55%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+ LR   V G    T+  G + TTD +RS+V++  + I+A+VDVKT D Y++R+    F
Sbjct: 65  KVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPTCF 124

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T +R         A++SQ++ IR  MVEI+  +AA  D +  + + I   +   I +   
Sbjct: 125 TIKR---------ARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAK 175

Query: 313 SIFPLQNVYVRKVKILKAP 257
            I+PL+ V +RK ++   P
Sbjct: 176 FIYPLRRVEIRKTEVETIP 194

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>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 77.4 bits (189), Expect = 4e-14
 Identities = 47/140 (33%), Positives = 70/140 (50%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+  +   V+G N  T F GM      +RSLVR+  T I+   ++ T D Y LR+ A+  
Sbjct: 67  KLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAMAI 126

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
             RR          Q SQ R IR+ M EI+  +A   + K+ V + +   I  EI K   
Sbjct: 127 AMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEGK 177

Query: 313 SIFPLQNVYVRKVKILKAPK 254
            I+PL+   +RK+K+L  P+
Sbjct: 178 KIYPLKKAEIRKIKVLGEPE 197

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>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 77.0 bits (188), Expect = 5e-14
 Identities = 47/140 (33%), Positives = 70/140 (50%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+  +   V+G N  T F GM      +RSLVR+  T I+   ++ T D Y LR+ A+  
Sbjct: 66  KLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVI 125

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
             RR          Q SQ R IR+ M EI+  +A   + K+ V + +   I  EI K   
Sbjct: 126 AARR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAK 176

Query: 313 SIFPLQNVYVRKVKILKAPK 254
            I+PL+   +RK+K+L  P+
Sbjct: 177 KIYPLKKAEIRKIKVLGEPE 196

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>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 46/139 (33%), Positives = 73/139 (52%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+  +   V G N  T FW  + T + L SL R+  + IE  VDV T D Y LR+ ++ F
Sbjct: 68  KLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVF 127

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T RR          + SQ R IR  M +I+V +A+S +  + + + +   +  EI K   
Sbjct: 128 TVRR---------CKTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAK 178

Query: 313 SIFPLQNVYVRKVKILKAP 257
            I+P++ V +RK+++L  P
Sbjct: 179 KIYPIRRVEIRKIELLAEP 197

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>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+  R   V+G    + F G     D +RSLVR+  + I+  +DV T D Y +R+  + F
Sbjct: 58  KVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAF 117

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PEVIGKEIE 326
           T RR         A+ SQ R IR++M +++   A  CD  E + + +     E I ++I+
Sbjct: 118 TTRR---------AKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIK 168

Query: 325 KATSSIFPLQNVYVRKVKILKAP 257
           +A   I+P++   +RK ++L+ P
Sbjct: 169 EAGRKIYPIRQAEIRKTEVLEEP 191

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>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae|
          Length = 204

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 43/139 (30%), Positives = 77/139 (55%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+ LR   V G    T+  G + TTD +RS+V++  + I+A+VDV+T D +++R+    F
Sbjct: 65  KVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCF 124

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T +R         A++SQ++ IR  MV+I+  +A+  D +  + + I   +   I +   
Sbjct: 125 TIKR---------ARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAK 175

Query: 313 SIFPLQNVYVRKVKILKAP 257
            I+PL+ V +RK ++   P
Sbjct: 176 FIYPLRRVEIRKTQVEAMP 194

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>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae|
          Length = 193

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 45/135 (33%), Positives = 69/135 (51%)
 Frame = -3

Query: 661 RAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 482
           R   V+G  +LT F G + + D +RSLVR+  + I+A  DV T D Y+LR+  +  T  R
Sbjct: 67  RVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLALTTYR 126

Query: 481 PNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFP 302
                    A  SQ  +IR+ +  I+  +A+     E V   +   +  +I +    I+P
Sbjct: 127 ---------AHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQAKKIYP 177

Query: 301 LQNVYVRKVKILKAP 257
           L+ V V K K+LKAP
Sbjct: 178 LRKVEVEKTKLLKAP 192

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>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae|
          Length = 197

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 45/132 (34%), Positives = 67/132 (50%)
 Frame = -3

Query: 649 VQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 470
           + G  + T F+G + + D +RSLVR+  + I A VDV T D YMLR+  +  T  R    
Sbjct: 74  ISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLTTYR---- 129

Query: 469 KRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNV 290
                A  SQ   IR+ + +I   +A   D  + V   I   +  +I +    I+PL+ V
Sbjct: 130 -----AHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRKV 184

Query: 289 YVRKVKILKAPK 254
            + K K+LKAPK
Sbjct: 185 EIEKTKLLKAPK 196

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>RS3A_METTH (O27630) 30S ribosomal protein S3Ae|
          Length = 195

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 41/139 (29%), Positives = 72/139 (51%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K++ + + V G    T F G   TTD +RS++R+  + ++A V V+T D Y L++  +  
Sbjct: 65  KLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLAI 124

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T RR         A++SQ + +R+ + E +   A+    +ELV   +   I  EI     
Sbjct: 125 TIRR---------AKSSQQKYMRQSIEEHLREIASEKTFEELVEGIVTGKIASEIYHQAK 175

Query: 313 SIFPLQNVYVRKVKILKAP 257
            I+PL+ V + K ++L+ P
Sbjct: 176 KIYPLKRVEIIKSRVLEEP 194

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>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae|
          Length = 200

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 41/139 (29%), Positives = 66/139 (47%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+  +   V+G N  T F G       +RSLVR+  T ++   ++ T D Y LR+  +  
Sbjct: 69  KLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVI 128

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
             RR          Q SQ R IR+ + +I+  +A   +  + V + +   I  EI K   
Sbjct: 129 AYRR---------IQTSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEAR 179

Query: 313 SIFPLQNVYVRKVKILKAP 257
            I+P++   VRK+K+L  P
Sbjct: 180 KIYPIKRAEVRKIKVLAEP 198

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>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae|
          Length = 213

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 44/167 (26%), Positives = 80/167 (47%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+  +   V   +  T F   + T D LRSLVR+  + +EA++ V TTD+Y +++  +  
Sbjct: 62  KLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAV 121

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T ++         A ASQ + IRR M++++   A     ++L++  +   +   I     
Sbjct: 122 TTKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAK 172

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGD 173
            I+PL+ V ++K  +   P+       EV  +  E+  V +D  D D
Sbjct: 173 DIYPLRRVEIKKTTLEARPE-------EVAAE--EETAVDVDEEDVD 210

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>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae|
          Length = 208

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 39/139 (28%), Positives = 73/139 (52%)
 Frame = -3

Query: 646 QGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVK 467
           +G  ++T F G + + D LRSL+R+  + I +  DV T D Y++R+  +  T  + +Q +
Sbjct: 73  EGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKGLVLTTYKCHQSQ 132

Query: 466 RTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVY 287
           +T          IR+ + E +  +A+     +   + +   +  EI +A   I+PL+   
Sbjct: 133 KTA---------IRKIINETVSKKASELSFDDFTQEVVFGRLANEIFEAAKKIYPLRKAE 183

Query: 286 VRKVKILKAPKFDLGKLME 230
           + K K+LK P+ +LGK +E
Sbjct: 184 IEKTKVLKVPE-NLGKQVE 201

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>RS3A_METJA (P54059) 30S ribosomal protein S3Ae|
          Length = 222

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 36/132 (27%), Positives = 67/132 (50%)
 Frame = -3

Query: 649 VQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 470
           V G   +  ++G D T + ++S +R+ ++ I+A +DVKT D + +R  A+  T  R N  
Sbjct: 80  VTGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDGHKIRTKAMVLTAYRANTK 139

Query: 469 KRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNV 290
           +++          IR+KM EI+   A      + V   +   + ++I+     IFP++NV
Sbjct: 140 QKS---------DIRKKMEEIIKAMAKEKTFPQYVQAMLFGEMAEKIKNECKKIFPIKNV 190

Query: 289 YVRKVKILKAPK 254
            + K ++L   K
Sbjct: 191 IIYKSEVLSLAK 202

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>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae|
          Length = 206

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 37/140 (26%), Positives = 66/140 (47%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+  + + V   +  T F   + T D  RSLVR+  + +   V V TTD+Y +R+  + +
Sbjct: 61  KLTFQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAY 120

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T ++ +Q         SQ   IRR M++++         + L+N  I   +   I    +
Sbjct: 121 TTKQADQ---------SQQHAIRRTMIDLVEEAGEERTFEALLNSIIEGRLSSAIYDEAN 171

Query: 313 SIFPLQNVYVRKVKILKAPK 254
           +I+PL+ V V K  +   P+
Sbjct: 172 TIYPLRRVEVEKATLEAHPE 191

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>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K+  +   V+G    T F G +   D +R L R+  + +    +V T D Y LR+ A+ F
Sbjct: 69  KMYFQVVRVEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAF 128

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PEVIGKEIE 326
           T++R          + SQ   IR+ M EI+  +A    L EL+   +       +   I+
Sbjct: 129 TRQR---------CKTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLID 179

Query: 325 KATSSIFPLQNVYVRKVKILKAP 257
           ++   I+PL+ V + K K+L  P
Sbjct: 180 ESARKIYPLRKVEIAKSKLLWVP 202

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>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 40/150 (26%), Positives = 69/150 (46%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K   R    +G    T F G     D +R LVR+ +  I+   DVKT+DN ++ +  +  
Sbjct: 66  KALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVV 125

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           T  +    K+          QIR+ + + ++N+  S    E V   I + I  ++  AT 
Sbjct: 126 TDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATK 176

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVH 224
            I+PL+ + VRK +++      L  + E+H
Sbjct: 177 DIYPLKKIEVRKSELV-----SLSGISEIH 201

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>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 38/177 (21%), Positives = 75/177 (42%)
 Frame = -3

Query: 673 KIRLRAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 494
           K   R    +G    T F G     D +R LVR+ +  I+   DVKT+D  ++ +  +  
Sbjct: 66  KALFRITGCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSIITVKIVVV 125

Query: 493 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 314
           +  +    K++         +IR+ +   +V++ +     + V   I +    ++ +AT 
Sbjct: 126 SDGKLTNTKKS---------EIRKALTSFIVSKGSQLSYADFVRYLIGDDSYNDMVEATK 176

Query: 313 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVA 143
           +I+PL+ + +RK            +L+ + G         +  P  +E  PG E +A
Sbjct: 177 NIYPLRKIEIRK-----------SELVSLSG---------MQEPQKNEPAPGGEAIA 213

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>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 29/132 (21%), Positives = 58/132 (43%)
 Frame = -3

Query: 661 RAEXVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 482
           R +   G    T F G   + D +R +VR+ +  I+  +  KT D Y L +  +  +  +
Sbjct: 69  RVKECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRLVIKIVLVSDSK 128

Query: 481 PNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFP 302
               KR          ++R K++  +  +  S  L EL    I + +  +I      ++P
Sbjct: 129 LTANKRG---------EVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYP 179

Query: 301 LQNVYVRKVKIL 266
           ++ + +RK ++L
Sbjct: 180 IKKIEIRKSEVL 191

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>RPOB_STRCO (Q9L0L0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1161

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -3

Query: 346 VIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL-DRPDGDE 170
           ++GK   K  + + P + + +R +   KA +     L   HG+  + +GV++ DR +GDE
Sbjct: 788 LVGKVTPKGETELTPEERL-LRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDE 846

Query: 169 VIPGAEEV 146
           + PG  ++
Sbjct: 847 LPPGVNQL 854

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>PGK_MYCMS (P62415) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 404

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
 Frame = -3

Query: 541 VKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVN 362
           V T DN ++  F         N  K   ++  S+I+    K+ + +   A    L+EL+N
Sbjct: 33  VITDDNRIIAAFPT-INYLLENDAKIVLFSHLSRIKSKEDKLKKSLAPVAKR--LEELLN 89

Query: 361 K---FIPEVIGKEIEKATSSIFPLQNVYVRKVK 272
           K   FI +  G+E+EKA SS+   + + V   +
Sbjct: 90  KQVKFINQTRGQELEKAISSLQSKEIILVENTR 122

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>RPOB_STRAW (Q82DQ5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1181

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -3

Query: 346  VIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL-DRPDGDE 170
            ++GK   K  + + P + + +R +   KA +     L   HG+  + +GV++ DR +GDE
Sbjct: 808  LVGKVTPKGETELTPEERL-LRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDE 866

Query: 169  VIPGAEEV 146
            + PG  ++
Sbjct: 867  LPPGVNQL 874


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,579,312
Number of Sequences: 219361
Number of extensions: 1626472
Number of successful extensions: 4665
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 4504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4642
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result