ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9e16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475688.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
2gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
4dbj|AK070308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
5gb|AY108769.1| Zea mays PCO138266 mRNA sequence 54 6e-04
6dbj|AP006585.1| Synechocystis sp. PCC 6803 plasmid pSYSX DNA, co... 44 0.54
7ref|NM_191382.1| Oryza sativa (japonica cultivar-group), predic... 42 2.1
8dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 42 2.1
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
10dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
11dbj|AK103570.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
12dbj|AK061986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
13ref|NM_001036408.1| Arabidopsis thaliana GRL/NAP1/NAPP AT2G35110... 40 8.4
14ref|NM_001034422.1| Bos taurus chromosome 20 open reading frame ... 40 8.4
15gb|AY496700.1| Arabidopsis thaliana ARP2/3 regulatory protein su... 40 8.4
16ref|XM_459724.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.4
17gb|AC160465.3| Mus musculus chromosome 8, clone RP23-267N9, comp... 40 8.4
18emb|CR956649.3| Pig DNA sequence from clone PigE-92E11 on chromo... 40 8.4
19ref|XM_448887.1| Candida glabrata CBS138, CAGL0L02673g partial mRNA 40 8.4
20gb|AC121877.2| Mus musculus BAC clone RP24-127G8 from 7, complet... 40 8.4
21emb|CR730728.2|CNS0GQRX Tetraodon nigroviridis full-length cDNA 40 8.4
22emb|CR728494.2|CNS0GP1W Tetraodon nigroviridis full-length cDNA 40 8.4
23emb|CR726065.2|CNS0GN6F Tetraodon nigroviridis full-length cDNA 40 8.4
24emb|CR723782.2|CNS0GLF0 Tetraodon nigroviridis full-length cDNA 40 8.4
25emb|CR664258.2|CNS0FBIG Tetraodon nigroviridis full-length cDNA 40 8.4
26ref|NM_001008190.1| Xenopus tropicalis olig3 protein (olig3), mRNA 40 8.4
27gb|BC082516.1| Xenopus tropicalis olig3 protein, mRNA (cDNA clon... 40 8.4
28gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 40 8.4
29emb|Y14558.1|PSY14558 Pisum sativum mRNA for topoisomerase I 40 8.4
30emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 40 8.4
31emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 40 8.4
32emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se... 40 8.4
33emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segmen... 40 8.4
34emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4,... 40 8.4
35emb|AL034352.1|SPBC725 S.pombe chromosome II cosmid c725 40 8.4
36gb|AF016440.2| Caenorhabditis elegans cosmid F29G9, complete seq... 40 8.4
37ref|NM_176739.1| Drosophila melanogaster CG33173-PA (CG33173) mR... 40 8.4
38ref|NM_167387.1| Drosophila melanogaster CG32611-RB (CG32611), mRNA 40 8.4
39gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map... 40 8.4
40gb|AY835433.1| Caenorhabditis elegans bZIP transcription factor ... 40 8.4
41gb|AY835432.1| Caenorhabditis elegans bZIP transcription factor ... 40 8.4
42gb|AC016948.4| Homo sapiens chromosome 3 BAC clone RP11-93N14 (R... 40 8.4
43ref|NM_001021408.1| Schizosaccharomyces pombe 972h- RNA polymera... 40 8.4
44gb|AC092401.1|AC092401 Drosophila melanogaster, chromosome X, re... 40 8.4
45ref|NM_001038392.1| Caenorhabditis elegans FOS (B-Zip transcript... 40 8.4
46ref|NM_001038391.1| Caenorhabditis elegans FOS (B-Zip transcript... 40 8.4
47gb|AC013431.9|AC013431 Drosophila melanogaster, chromosome X, re... 40 8.4
48tpg|BK004072.1| TPA: TPA_exp: Arabidopsis thaliana NAPP (NAPP) g... 40 8.4
49gb|BT022126.1| Drosophila melanogaster IP08939 full insert cDNA 40 8.4
50dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
51gb|AC010705.15|AC010705 Drosophila melanogaster, chromosome X, r... 40 8.4
52gb|AC102574.9| Mus musculus chromosome 8, clone RP23-239K24, com... 40 8.4
53gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complet... 40 8.4
54ref|XM_222633.3| PREDICTED: Rattus norvegicus protein phosphatas... 40 8.4
55gb|BT021696.1| Bos taurus chromosome 20 open reading frame 28 (C... 40 8.4
56ref|XM_551630.1| Anopheles gambiae str. PEST ENSANGP00000027297 ... 40 8.4
57gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 ... 40 8.4
58gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 ... 40 8.4
59emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 8.4
60gb|AC151534.2| Mus musculus BAC clone RP23-446E13 from 7, comple... 40 8.4
61gb|AC164160.5| Mus musculus BAC clone RP23-343P15 from chromosom... 40 8.4
62gb|AC153844.3| Mus musculus 6 BAC RP23-376H18 (Roswell Park Canc... 40 8.4 
>ref|XM_475688.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 891

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 341 tcatcgtcatcctccagatcgctgaatgacacatcttcgtcctg 384
           |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 863 tcatcgtcatcctccagatcactgaacgatacatcttcctcctg 820
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>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11,
             complete sequence
          Length = 162772

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 341   tcatcgtcatcctccagatcgctgaatgacacatcttcgtcctg 384
             |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 41056 tcatcgtcatcctccagatcactgaacgatacatcttcctcctg 41013
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 341      tcatcgtcatcctccagatcgctgaatgacacatcttcgtcctg 384
                |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 25098401 tcatcgtcatcctccagatcactgaacgatacatcttcctcctg 25098358
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>dbj|AK070308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049A10, full
            insert sequence
          Length = 1506

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 341  tcatcgtcatcctccagatcgctgaatgacacatcttcgtcctg 384
            |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 1168 tcatcgtcatcctccagatcactgaacgatacatcttcctcctg 1125
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>gb|AY108769.1| Zea mays PCO138266 mRNA sequence
          Length = 1388

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 524 caccagctcttcttcgattacagacttgtcaactatttc 562
           ||||| ||||||||  |||||||||||||||||||||||
Sbjct: 785 caccaactcttcttgaattacagacttgtcaactatttc 747
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>dbj|AP006585.1| Synechocystis sp. PCC 6803 plasmid pSYSX DNA, complete sequence
          Length = 106004

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 337   atcatcatcgtcatcctccaga 358
             ||||||||||||||||||||||
Sbjct: 90362 atcatcatcgtcatcctccaga 90341
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>ref|NM_191382.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1575

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 576  tgaaatgggatgcttgtcagcctca 600
            |||||| ||||||||||||||||||
Sbjct: 1326 tgaaatcggatgcttgtcagcctca 1302



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 336  aatcatcatcgtcatcctccagatcgctgaatgacacatcttcgtcctgccc 387
            ||||||| || |||||||||||||| ||||| || |  ||||| ||||||||
Sbjct: 1573 aatcatcctcttcatcctccagatcactgaaggatatgtcttcctcctgccc 1522
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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 119     acacgggcggctagtgtttct 139
               |||||||||||||||||||||
Sbjct: 1701514 acacgggcggctagtgtttct 1701494
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 576      tgaaatgggatgcttgtcagcctca 600
                |||||| ||||||||||||||||||
Sbjct: 32295710 tgaaatcggatgcttgtcagcctca 32295686



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 336      aatcatcatcgtcatcctccagatcgctgaatgacacatcttcgtcctgccc 387
                ||||||| || |||||||||||||| ||||| || |  ||||| ||||||||
Sbjct: 32295957 aatcatcctcttcatcctccagatcactgaaggatatgtcttcctcctgccc 32295906
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>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0053G03
          Length = 101901

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 576   tgaaatgggatgcttgtcagcctca 600
             |||||| ||||||||||||||||||
Sbjct: 27995 tgaaatcggatgcttgtcagcctca 27971



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 336   aatcatcatcgtcatcctccagatcgctgaatgacacatcttcgtcctgccc 387
             ||||||| || |||||||||||||| ||||| || |  ||||| ||||||||
Sbjct: 28242 aatcatcctcttcatcctccagatcactgaaggatatgtcttcctcctgccc 28191
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>dbj|AK103570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132M15, full
            insert sequence
          Length = 1621

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 576  tgaaatgggatgcttgtcagcctca 600
            |||||| ||||||||||||||||||
Sbjct: 1038 tgaaatcggatgcttgtcagcctca 1014



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 336  aatcatcatcgtcatcctccagatcgctgaatgacacatcttcgtcctgccc 387
            ||||||| || |||||||||||||| ||||| || |  ||||| ||||||||
Sbjct: 1285 aatcatcctcttcatcctccagatcactgaaggatatgtcttcctcctgccc 1234
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>dbj|AK061986.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B06, full
            insert sequence
          Length = 1590

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 576  tgaaatgggatgcttgtcagcctca 600
            |||||| ||||||||||||||||||
Sbjct: 1018 tgaaatcggatgcttgtcagcctca 994



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 336  aatcatcatcgtcatcctccagatcgctgaatgacacatcttcgtcctgccc 387
            ||||||| || |||||||||||||| ||||| || |  ||||| ||||||||
Sbjct: 1265 aatcatcctcttcatcctccagatcactgaaggatatgtcttcctcctgccc 1214
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>ref|NM_001036408.1| Arabidopsis thaliana GRL/NAP1/NAPP AT2G35110 (GRL/NAP1/NAPP)
           transcript variant AT2G35110.2 mRNA, complete cds
          Length = 4636

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tctttgtcgtcgtcatcatc 472
           ||||||||||||||||||||
Sbjct: 46  tctttgtcgtcgtcatcatc 65
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>ref|NM_001034422.1| Bos taurus chromosome 20 open reading frame 28 (C20orf28), mRNA
          Length = 1412

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 347 tcatcctccagatcgctgaa 366
           ||||||||||||||||||||
Sbjct: 694 tcatcctccagatcgctgaa 713
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>gb|AY496700.1| Arabidopsis thaliana ARP2/3 regulatory protein subunit NAPP mRNA,
           complete cds
          Length = 4570

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tctttgtcgtcgtcatcatc 472
           ||||||||||||||||||||
Sbjct: 46  tctttgtcgtcgtcatcatc 65
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>ref|XM_459724.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E10131g)
           partial mRNA
          Length = 681

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 taatcatcatcgtcatcctc 354
           ||||||||||||||||||||
Sbjct: 608 taatcatcatcgtcatcctc 589
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>gb|AC160465.3| Mus musculus chromosome 8, clone RP23-267N9, complete sequence
          Length = 224985

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    catgatggcacacaagtaaa 169
              ||||||||||||||||||||
Sbjct: 141936 catgatggcacacaagtaaa 141955
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>emb|CR956649.3| Pig DNA sequence from clone PigE-92E11 on chromosome 6, complete
            sequence
          Length = 127453

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 337  atcatcatcgtcatcctcca 356
            ||||||||||||||||||||
Sbjct: 6597 atcatcatcgtcatcctcca 6616
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>ref|XM_448887.1| Candida glabrata CBS138, CAGL0L02673g partial mRNA
          Length = 2565

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 338 tcatcatcgtcatcctccagatcg 361
           |||||||||||||| |||||||||
Sbjct: 104 tcatcatcgtcatcatccagatcg 81
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>gb|AC121877.2| Mus musculus BAC clone RP24-127G8 from 7, complete sequence
          Length = 130451

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   tatcaggcactgggttttgg 313
             ||||||||||||||||||||
Sbjct: 63611 tatcaggcactgggttttgg 63630
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>emb|CR730728.2|CNS0GQRX Tetraodon nigroviridis full-length cDNA
          Length = 1206

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 537  tcgattacagacttgtcaac 556
            ||||||||||||||||||||
Sbjct: 1149 tcgattacagacttgtcaac 1130
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>emb|CR728494.2|CNS0GP1W Tetraodon nigroviridis full-length cDNA
          Length = 1553

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 537  tcgattacagacttgtcaac 556
            ||||||||||||||||||||
Sbjct: 1468 tcgattacagacttgtcaac 1449
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>emb|CR726065.2|CNS0GN6F Tetraodon nigroviridis full-length cDNA
          Length = 1239

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 537  tcgattacagacttgtcaac 556
            ||||||||||||||||||||
Sbjct: 1154 tcgattacagacttgtcaac 1135
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>emb|CR723782.2|CNS0GLF0 Tetraodon nigroviridis full-length cDNA
          Length = 1553

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 537  tcgattacagacttgtcaac 556
            ||||||||||||||||||||
Sbjct: 1467 tcgattacagacttgtcaac 1448
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>emb|CR664258.2|CNS0FBIG Tetraodon nigroviridis full-length cDNA
          Length = 387

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 537 tcgattacagacttgtcaac 556
           ||||||||||||||||||||
Sbjct: 302 tcgattacagacttgtcaac 283
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>ref|NM_001008190.1| Xenopus tropicalis olig3 protein (olig3), mRNA
          Length = 1847

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 tttcagttatgaccaccagc 530
           ||||||||||||||||||||
Sbjct: 867 tttcagttatgaccaccagc 886
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>gb|BC082516.1| Xenopus tropicalis olig3 protein, mRNA (cDNA clone MGC:89336
           IMAGE:6987669), complete cds
          Length = 1847

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 tttcagttatgaccaccagc 530
           ||||||||||||||||||||
Sbjct: 867 tttcagttatgaccaccagc 886
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    taatcatcatcgtcatcctc 354
              ||||||||||||||||||||
Sbjct: 967997 taatcatcatcgtcatcctc 968016
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>emb|Y14558.1|PSY14558 Pisum sativum mRNA for topoisomerase I
          Length = 3055

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 atcatcatcgtcatcctcca 356
           ||||||||||||||||||||
Sbjct: 570 atcatcatcgtcatcctcca 551
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
              hansenii
          Length = 2037969

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    taatcatcatcgtcatcctc 354
              ||||||||||||||||||||
Sbjct: 758677 taatcatcatcgtcatcctc 758658
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>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 338    tcatcatcgtcatcctccagatcg 361
              |||||||||||||| |||||||||
Sbjct: 315623 tcatcatcgtcatcatccagatcg 315646
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>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tttgcttgaacttaaccgtt 22
              ||||||||||||||||||||
Sbjct: 285661 tttgcttgaacttaaccgtt 285642
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>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7
          Length = 349652

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 593    cagcctcagccgctggcaga 612
              ||||||||||||||||||||
Sbjct: 185169 cagcctcagccgctggcaga 185150
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>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21,
              complete sequence
          Length = 166475

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    tctttgtcgtcgtcatcatc 472
              ||||||||||||||||||||
Sbjct: 155695 tctttgtcgtcgtcatcatc 155676
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>emb|AL034352.1|SPBC725 S.pombe chromosome II cosmid c725
          Length = 37949

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    ctacaatcagaatcctgcat 92
             ||||||||||||||||||||
Sbjct: 35832 ctacaatcagaatcctgcat 35813
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>gb|AF016440.2| Caenorhabditis elegans cosmid F29G9, complete sequence
          Length = 42751

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   atcatcatcgtcatcctcca 356
             ||||||||||||||||||||
Sbjct: 13037 atcatcatcgtcatcctcca 13018
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>ref|NM_176739.1| Drosophila melanogaster CG33173-PA (CG33173) mRNA, complete cds
          Length = 5504

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  tgtttctatgtacagaccat 152
            ||||||||||||||||||||
Sbjct: 1191 tgtttctatgtacagaccat 1210
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>ref|NM_167387.1| Drosophila melanogaster CG32611-RB (CG32611), mRNA
          Length = 3313

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  tcatcgtcatcctccagatc 360
            ||||||||||||||||||||
Sbjct: 1589 tcatcgtcatcctccagatc 1570
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>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete
             sequence
          Length = 91863

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   tctttgtcgtcgtcatcatc 472
             ||||||||||||||||||||
Sbjct: 65669 tctttgtcgtcgtcatcatc 65688
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>gb|AY835433.1| Caenorhabditis elegans bZIP transcription factor FOS-1b (fos-1)
           mRNA, complete cds
          Length = 1219

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 atcatcatcgtcatcctcca 356
           ||||||||||||||||||||
Sbjct: 304 atcatcatcgtcatcctcca 285
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>gb|AY835432.1| Caenorhabditis elegans bZIP transcription factor FOS-1a (fos-1)
           mRNA, complete cds
          Length = 1414

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 atcatcatcgtcatcctcca 356
           ||||||||||||||||||||
Sbjct: 499 atcatcatcgtcatcctcca 480
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>gb|AC016948.4| Homo sapiens chromosome 3 BAC clone RP11-93N14 (Rosewell Park Cancer
             Institute Human Bac Library) complete sequence
          Length = 154350

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   atcctctagccaatcctcca 450
             ||||||||||||||||||||
Sbjct: 45984 atcctctagccaatcctcca 46003
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>ref|NM_001021408.1| Schizosaccharomyces pombe 972h- RNA polymerase I protein
           (SPBC725.17c), partial mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  ctacaatcagaatcctgcat 92
           ||||||||||||||||||||
Sbjct: 456 ctacaatcagaatcctgcat 475
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>gb|AC092401.1|AC092401 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone
             BACR25C18, complete sequence
          Length = 185200

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   tgtttctatgtacagaccat 152
             ||||||||||||||||||||
Sbjct: 86090 tgtttctatgtacagaccat 86109
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>ref|NM_001038392.1| Caenorhabditis elegans FOS (B-Zip transcription factor) homolog
           family member (fos-1) (fos-1) mRNA, complete cds
          Length = 1404

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 atcatcatcgtcatcctcca 356
           ||||||||||||||||||||
Sbjct: 492 atcatcatcgtcatcctcca 473
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>ref|NM_001038391.1| Caenorhabditis elegans FOS (B-Zip transcription factor) homolog
           family member (fos-1) (fos-1) mRNA, complete cds
          Length = 1187

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 atcatcatcgtcatcctcca 356
           ||||||||||||||||||||
Sbjct: 275 atcatcatcgtcatcctcca 256
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>gb|AC013431.9|AC013431 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone
             BACR22H11, complete sequence
          Length = 191558

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   tgtttctatgtacagaccat 152
             ||||||||||||||||||||
Sbjct: 64820 tgtttctatgtacagaccat 64839
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>tpg|BK004072.1| TPA: TPA_exp: Arabidopsis thaliana NAPP (NAPP) gene, complete cds
          Length = 8133

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 tctttgtcgtcgtcatcatc 472
           ||||||||||||||||||||
Sbjct: 46  tctttgtcgtcgtcatcatc 65
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>gb|BT022126.1| Drosophila melanogaster IP08939 full insert cDNA
          Length = 3001

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  tcatcgtcatcctccagatc 360
            ||||||||||||||||||||
Sbjct: 2078 tcatcgtcatcctccagatc 2059
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 453     tctttgtcgtcgtcatcatc 472
               ||||||||||||||||||||
Sbjct: 7134504 tctttgtcgtcgtcatcatc 7134485
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>gb|AC010705.15|AC010705 Drosophila melanogaster, chromosome X, region 12D-12E, BAC clone
             BACR28F21, complete sequence
          Length = 163958

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   tcatcgtcatcctccagatc 360
             ||||||||||||||||||||
Sbjct: 56726 tcatcgtcatcctccagatc 56745
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>gb|AC102574.9| Mus musculus chromosome 8, clone RP23-239K24, complete sequence
          Length = 193168

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   catgatggcacacaagtaaa 169
             ||||||||||||||||||||
Sbjct: 51233 catgatggcacacaagtaaa 51214
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>gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complete sequence
          Length = 151297

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   atgtacagaccatgatggca 159
             ||||||||||||||||||||
Sbjct: 82266 atgtacagaccatgatggca 82247
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>ref|XM_222633.3| PREDICTED: Rattus norvegicus protein phosphatase 1, regulatory
           (inhibitor) subunit 15b (predicted)
           (Ppp1r15b_predicted), mRNA
          Length = 2358

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 584 gatgcttgtcagcctcagccgctg 607
           ||||||||||| ||||||||||||
Sbjct: 772 gatgcttgtcaccctcagccgctg 795
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>gb|BT021696.1| Bos taurus chromosome 20 open reading frame 28 (C20orf28), mRNA,
           complete cds
          Length = 1412

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 347 tcatcctccagatcgctgaa 366
           ||||||||||||||||||||
Sbjct: 694 tcatcctccagatcgctgaa 713
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>ref|XM_551630.1| Anopheles gambiae str. PEST ENSANGP00000027297
           (ENSANGG00000023714), partial mRNA
          Length = 576

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 tcatcatcgtcatcctccag 357
           ||||||||||||||||||||
Sbjct: 479 tcatcatcgtcatcctccag 460
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>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete
             sequence
          Length = 303344

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   tgtttctatgtacagaccat 152
             ||||||||||||||||||||
Sbjct: 68810 tgtttctatgtacagaccat 68829
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>gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 of 74 of the complete
             sequence
          Length = 310498

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   tcatcgtcatcctccagatc 360
             ||||||||||||||||||||
Sbjct: 20914 tcatcgtcatcctccagatc 20933
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    cgtcgtcatcatccggagtg 479
              ||||||||||||||||||||
Sbjct: 144207 cgtcgtcatcatccggagtg 144226
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>gb|AC151534.2| Mus musculus BAC clone RP23-446E13 from 7, complete sequence
          Length = 184053

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    tatcaggcactgggttttgg 313
              ||||||||||||||||||||
Sbjct: 147957 tatcaggcactgggttttgg 147938
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>gb|AC164160.5| Mus musculus BAC clone RP23-343P15 from chromosome 7, complete sequence
          Length = 235030

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    tatcaggcactgggttttgg 313
              ||||||||||||||||||||
Sbjct: 159420 tatcaggcactgggttttgg 159439
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>gb|AC153844.3| Mus musculus 6 BAC RP23-376H18 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 192895

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   tctttgtcgtcgtcatcatc 472
             ||||||||||||||||||||
Sbjct: 88986 tctttgtcgtcgtcatcatc 89005


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,475,648
Number of Sequences: 3902068
Number of extensions: 4475648
Number of successful extensions: 90124
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89852
Number of HSP's gapped (non-prelim): 272
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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