ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-) 70 4e-12
2C97B3_ARATH (O23365) Cytochrome P450 97B3 (EC 1.14.-.-) 66 8e-11
3GPA8_CAEEL (Q20907) Guanine nucleotide-binding protein alpha-8 s... 30 6.6

>C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-)|
          Length = 576

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 29/39 (74%), Positives = 37/39 (94%)
 Frame = -3

Query: 668 LLLQKFDVELRGSPDEVEMVTGATIHTKNGLWCRLRKRT 552
           +LLQ FDVEL+G+P+ VE+VTGATIHTKNG+WCRL+KR+
Sbjct: 535 MLLQNFDVELKGTPESVELVTGATIHTKNGMWCRLKKRS 573



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>C97B3_ARATH (O23365) Cytochrome P450 97B3 (EC 1.14.-.-)|
          Length = 580

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 26/39 (66%), Positives = 36/39 (92%)
 Frame = -3

Query: 668 LLLQKFDVELRGSPDEVEMVTGATIHTKNGLWCRLRKRT 552
           +L QKFDVELRG+P+ VE+V+GATIH KNG+WC+L++R+
Sbjct: 541 MLFQKFDVELRGTPESVELVSGATIHAKNGMWCKLKRRS 579



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>GPA8_CAEEL (Q20907) Guanine nucleotide-binding protein alpha-8 subunit|
          Length = 364

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = -3

Query: 566 LRKRT*SAGIILHQKALLIVDFSRRLHALAGYKAGSCTWLHLFGALGASILCTTI 402
           L+ R  ++G+I  Q  +++ +F+ R+  + G +A    WLH+F  + A +  T++
Sbjct: 186 LKSRVPTSGVI--QYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFITSL 238


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,246,552
Number of Sequences: 219361
Number of extensions: 1925159
Number of successful extensions: 3994
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3993
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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