ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
2dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
3dbj|AK100596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
4dbj|AK066680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
5dbj|AK062235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
6ref|XM_464306.1| Oryza sativa (japonica cultivar-group), mRNA 131 3e-27
7gb|AY105805.1| Zea mays PCO075459 mRNA sequence 127 5e-26
8gb|AC123693.13| Mus musculus chromosome 3, clone RP23-326F23, co... 44 0.59
9emb|AL603789.3| Human DNA sequence from clone RP11-415G4 on chro... 44 0.59
10dbj|AB192877.1| Human enterovirus 90 genomic RNA, complete genome 44 0.59
11gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome 42 2.3
12gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome... 42 2.3
13gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, com... 42 2.3
14gb|AC097105.10| Homo sapiens 3 BAC RP11-119P22 (Roswell Park Can... 42 2.3
15gb|AC093830.3| Homo sapiens BAC clone RP11-401G24 from 4, comple... 42 2.3
16gb|AC019278.6|AC019278 Homo sapiens, clone RP11-12O16, complete ... 42 2.3
17gb|AC022309.16|AC022309 Homo sapiens chromosome 15 clone RP11-67... 42 2.3
18gb|AC004148.1|AC004148 Homo sapiens chromosome 17, clone HCIT524... 42 2.3
19gb|AC118598.8| Mus musculus chromosome 5, clone RP23-446M13, com... 42 2.3
20gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome... 42 2.3
21gb|AC141884.4| Mus musculus BAC clone RP24-129E6 from chromosome... 40 9.2
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.2
23gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosom... 40 9.2
24gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genom... 40 9.2
25emb|CR974575.8| Mouse DNA sequence from clone RP23-77K24 on chro... 40 9.2
26gb|AC010799.15| Homo sapiens chromosome 15, clone RP11-40J8, com... 40 9.2
27emb|AL161630.12| Human DNA sequence from clone RP11-500B12 on ch... 40 9.2
28gb|AC127486.3| Homo sapiens chromosome 15, clone CTD-2012K22, co... 40 9.2
29gb|AC134698.10| Homo sapiens chromosome 8, clone RP11-359P18, co... 40 9.2
30gb|AC008556.5| Homo sapiens chromosome 19 clone CTC-526N19, comp... 40 9.2
31gb|AC091565.10| Homo sapiens chromosome 15, clone RP11-228M15, c... 40 9.2
32gb|AC019322.8| Homo sapiens chromosome 15, clone RP11-382B18, co... 40 9.2
33dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
34gb|AC069235.23|AC069235 Homo sapiens 12 BAC RP11-173C20 (Roswell... 40 9.2
35gb|AF230636.7| Homo sapiens chromosome 8 clone RP4-801G19 map ce... 40 9.2
36gb|AC123768.8| Homo sapiens chromosome 15, clone RP11-1000B6, co... 40 9.2
37gb|AC026150.7| Homo sapiens chromosome 15, clone RP11-605N15, co... 40 9.2
38gb|AC022506.38| Homo sapiens 12 BAC RP11-181L23 (Roswell Park Ca... 40 9.2
39gb|AC135983.4| Homo sapiens chromosome 15, clone RP11-632K20, co... 40 9.2
40gb|BC035831.1| Homo sapiens, clone IMAGE:5581527, mRNA 40 9.2
41gb|AC137568.8| Homo sapiens chromosome 15, clone RP11-1217C12, c... 40 9.2
42gb|AC138649.2| Homo sapiens chromosome 15, clone RP11-1180F24, c... 40 9.2
43gb|AC126610.12| Homo sapiens chromosome 15, clone RP11-733O21, c... 40 9.2
44emb|BX649462.9| Mouse DNA sequence from clone RP23-324J22 on chr... 40 9.2
45gb|AC111164.6| Homo sapiens chromosome 15, clone RP11-1109N12, c... 40 9.2
46emb|BX276103.13| Zebrafish DNA sequence from clone DKEY-7B17, co... 40 9.2
47emb|BX005059.4| Zebrafish DNA sequence from clone CH211-138A6, c... 40 9.2
48gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, co... 40 9.2
49emb|CT571248.10| Mouse DNA sequence from clone RP24-355C16 on ch... 40 9.2
50dbj|AP000445.5| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.2
51dbj|AP001350.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.2
52emb|CT030704.5| Mouse DNA sequence from clone RP24-317K15 on chr... 40 9.2
53gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.2
54gb|AC124094.4| Homo sapiens chromosome 15, clone RP11-1203N1, co... 40 9.2 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 5e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                           
Query: 546     tgatcaagtccttttcctcagcctgcaccacaaaccgttctttgtgtgaatcgtcgcgcc 605
               |||||| |||||| ||||||  |||||||| || ||| |||| |||||||| || |||||
Sbjct: 4001725 tgatcaggtccttctcctcactctgcaccataacccgctcttcgtgtgaattgttgcgcc 4001666

                                                                           
Query: 606     tgtcaccatctctacttcatcgggcgagcctcgcagctccacgtcaaacttttgcaatag 665
               |||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 4001665 tgtcaccatctccacttcatcgggtgatcctcgcagctccacatcaaacttttgcaatag 4001606

                    
Query: 666     caggg 670
               |||||
Sbjct: 4001605 caggg 4001601



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 127     ctgtgggcttcttgtttcctgcacagcatgcatcccaccgcaacacggcacaa 179
               ||||| |||||||||||||||||| ||||||||||| | ||  ||||||||||
Sbjct: 4002295 ctgtgtgcttcttgtttcctgcactgcatgcatcccgctgcggcacggcacaa 4002243



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 247     agatcaggtgatctgggttcacaagaaaccggacacct 284
               ||||||||| ||||| ||| | ||||||||||||||||
Sbjct: 4002059 agatcaggttatctgagtttagaagaaaccggacacct 4002022
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>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0073A21
          Length = 170051

 Score =  137 bits (69), Expect = 5e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                         
Query: 546   tgatcaagtccttttcctcagcctgcaccacaaaccgttctttgtgtgaatcgtcgcgcc 605
             |||||| |||||| ||||||  |||||||| || ||| |||| |||||||| || |||||
Sbjct: 48391 tgatcaggtccttctcctcactctgcaccataacccgctcttcgtgtgaattgttgcgcc 48332

                                                                         
Query: 606   tgtcaccatctctacttcatcgggcgagcctcgcagctccacgtcaaacttttgcaatag 665
             |||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 48331 tgtcaccatctccacttcatcgggtgatcctcgcagctccacatcaaacttttgcaatag 48272

                  
Query: 666   caggg 670
             |||||
Sbjct: 48271 caggg 48267



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 127   ctgtgggcttcttgtttcctgcacagcatgcatcccaccgcaacacggcacaa 179
             ||||| |||||||||||||||||| ||||||||||| | ||  ||||||||||
Sbjct: 48961 ctgtgtgcttcttgtttcctgcactgcatgcatcccgctgcggcacggcacaa 48909



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 247   agatcaggtgatctgggttcacaagaaaccggacacct 284
             ||||||||| ||||| ||| | ||||||||||||||||
Sbjct: 48725 agatcaggttatctgagtttagaagaaaccggacacct 48688
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>dbj|AK100596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106P10, full
            insert sequence
          Length = 2093

 Score =  137 bits (69), Expect = 5e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                        
Query: 546  tgatcaagtccttttcctcagcctgcaccacaaaccgttctttgtgtgaatcgtcgcgcc 605
            |||||| |||||| ||||||  |||||||| || ||| |||| |||||||| || |||||
Sbjct: 1652 tgatcaggtccttctcctcactctgcaccataacccgctcttcgtgtgaattgttgcgcc 1593

                                                                        
Query: 606  tgtcaccatctctacttcatcgggcgagcctcgcagctccacgtcaaacttttgcaatag 665
            |||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 1592 tgtcaccatctccacttcatcgggtgatcctcgcagctccacatcaaacttttgcaatag 1533

                 
Query: 666  caggg 670
            |||||
Sbjct: 1532 caggg 1528



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 127  ctgtgggcttcttgtttcctgcacagcatgcatcccaccgcaacacggcacaa 179
            ||||| |||||||||||||||||| ||||||||||| | ||  ||||||||||
Sbjct: 1732 ctgtgtgcttcttgtttcctgcactgcatgcatcccgctgcggcacggcacaa 1680
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>dbj|AK066680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071M18, full
            insert sequence
          Length = 2401

 Score =  137 bits (69), Expect = 5e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                        
Query: 546  tgatcaagtccttttcctcagcctgcaccacaaaccgttctttgtgtgaatcgtcgcgcc 605
            |||||| |||||| ||||||  |||||||| || ||| |||| |||||||| || |||||
Sbjct: 1995 tgatcaggtccttctcctcactctgcaccataacccgctcttcgtgtgaattgttgcgcc 1936

                                                                        
Query: 606  tgtcaccatctctacttcatcgggcgagcctcgcagctccacgtcaaacttttgcaatag 665
            |||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 1935 tgtcaccatctccacttcatcgggtgatcctcgcagctccacatcaaacttttgcaatag 1876

                 
Query: 666  caggg 670
            |||||
Sbjct: 1875 caggg 1871



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 127  ctgtgggcttcttgtttcctgcacagcatgcatcccaccgcaacacggcacaa 179
            ||||| |||||||||||||||||| ||||||||||| | ||  ||||||||||
Sbjct: 2075 ctgtgtgcttcttgtttcctgcactgcatgcatcccgctgcggcacggcacaa 2023
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>dbj|AK062235.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D12, full
            insert sequence
          Length = 1498

 Score =  137 bits (69), Expect = 5e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                        
Query: 546  tgatcaagtccttttcctcagcctgcaccacaaaccgttctttgtgtgaatcgtcgcgcc 605
            |||||| |||||| ||||||  |||||||| || ||| |||| |||||||| || |||||
Sbjct: 1021 tgatcaggtccttctcctcactctgcaccataacccgctcttcgtgtgaattgttgcgcc 962

                                                                        
Query: 606  tgtcaccatctctacttcatcgggcgagcctcgcagctccacgtcaaacttttgcaatag 665
            |||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 961  tgtcaccatctccacttcatcgggtgatcctcgcagctccacatcaaacttttgcaatag 902

                 
Query: 666  caggg 670
            |||||
Sbjct: 901  caggg 897



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 127  ctgtgggcttcttgtttcctgcacagcatgcatcccaccgcaacacggcacaa 179
            ||||| |||||||||||||||||| ||||||||||| | ||  ||||||||||
Sbjct: 1101 ctgtgtgcttcttgtttcctgcactgcatgcatcccgctgcggcacggcacaa 1049
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>ref|XM_464306.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1716

 Score =  131 bits (66), Expect = 3e-27
 Identities = 105/118 (88%)
 Strand = Plus / Minus

                                                                        
Query: 553  gtccttttcctcagcctgcaccacaaaccgttctttgtgtgaatcgtcgcgcctgtcacc 612
            |||||| ||||||  |||||||| || ||| |||| |||||||| || ||||||||||||
Sbjct: 1712 gtccttctcctcactctgcaccataacccgctcttcgtgtgaattgttgcgcctgtcacc 1653

                                                                      
Query: 613  atctctacttcatcgggcgagcctcgcagctccacgtcaaacttttgcaatagcaggg 670
            ||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||
Sbjct: 1652 atctccacttcatcgggtgatcctcgcagctccacatcaaacttttgcaatagcaggg 1595
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>gb|AY105805.1| Zea mays PCO075459 mRNA sequence
          Length = 793

 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                       
Query: 549 tcaagtccttttcctcagcctgcaccacaaaccgttctttgtgtgaatcgtcgcgcctgt 608
           |||||||||| ||||||||||||||||||  |||||||| ||||| ||||| ||||||||
Sbjct: 611 tcaagtccttctcctcagcctgcaccacagcccgttcttcgtgtggatcgtggcgcctgt 552

                                                           
Query: 609 caccatctctacttcatcgggcgagcctcgcagctccacgtcaaactt 656
           ||||||||| ||||| |||||||| |||| |||||||||||| |||||
Sbjct: 551 caccatctccacttcgtcgggcgaccctctcagctccacgtcgaactt 504
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>gb|AC123693.13| Mus musculus chromosome 3, clone RP23-326F23, complete sequence
          Length = 225242

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 344    tctgtttagatgcatgcatgca 365
              ||||||||||||||||||||||
Sbjct: 155143 tctgtttagatgcatgcatgca 155122
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>emb|AL603789.3| Human DNA sequence from clone RP11-415G4 on chromosome 13, complete
              sequence
          Length = 129361

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 98     tctgcatcgattttgttttgaa 119
              ||||||||||||||||||||||
Sbjct: 106900 tctgcatcgattttgttttgaa 106921
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>dbj|AB192877.1| Human enterovirus 90 genomic RNA, complete genome
          Length = 7425

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 321  ggcatggagtgtactactgtaa 342
            ||||||||||||||||||||||
Sbjct: 3514 ggcatggagtgtactactgtaa 3535
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>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 89      caatcgctatctgcatcgattttgt 113
               |||||||| ||||||||||||||||
Sbjct: 1915300 caatcgctttctgcatcgattttgt 1915324
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>gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome 14, complete
            sequence
          Length = 181842

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 346  tgtttagatgcatgcatgcac 366
            |||||||||||||||||||||
Sbjct: 6264 tgtttagatgcatgcatgcac 6284
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>gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, complete sequence
          Length = 216377

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 345    ctgtttagatgcatgcatgca 365
              |||||||||||||||||||||
Sbjct: 152039 ctgtttagatgcatgcatgca 152059
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>gb|AC097105.10| Homo sapiens 3 BAC RP11-119P22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111122

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 513   aagcaaagccttttggtgcaaaatt 537
             ||||||| |||||||||||||||||
Sbjct: 73110 aagcaaatccttttggtgcaaaatt 73086
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>gb|AC093830.3| Homo sapiens BAC clone RP11-401G24 from 4, complete sequence
          Length = 153887

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 550    caagtccttttcctcagcctg 570
              |||||||||||||||||||||
Sbjct: 101348 caagtccttttcctcagcctg 101368
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>gb|AC019278.6|AC019278 Homo sapiens, clone RP11-12O16, complete sequence
          Length = 168658

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 299    atcacaataatctggtcaatc 319
              |||||||||||||||||||||
Sbjct: 103312 atcacaataatctggtcaatc 103332
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>gb|AC022309.16|AC022309 Homo sapiens chromosome 15 clone RP11-67O17, complete sequence
          Length = 172482

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 299   atcacaataatctggtcaatc 319
             |||||||||||||||||||||
Sbjct: 28743 atcacaataatctggtcaatc 28723
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>gb|AC004148.1|AC004148 Homo sapiens chromosome 17, clone HCIT524C5, complete sequence
          Length = 118276

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   tcgattttgttttgaatttaa 124
             |||||||||||||||||||||
Sbjct: 48023 tcgattttgttttgaatttaa 48043
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>gb|AC118598.8| Mus musculus chromosome 5, clone RP23-446M13, complete sequence
          Length = 186276

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 345    ctgtttagatgcatgcatgca 365
              |||||||||||||||||||||
Sbjct: 129755 ctgtttagatgcatgcatgca 129775
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>gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome 14, complete sequence
          Length = 224638

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 346    tgtttagatgcatgcatgcac 366
              |||||||||||||||||||||
Sbjct: 109391 tgtttagatgcatgcatgcac 109411
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>gb|AC141884.4| Mus musculus BAC clone RP24-129E6 from chromosome 14, complete sequence
          Length = 174973

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 12     atgataacaaaatgcagaatagta 35
              |||||| |||||||||||||||||
Sbjct: 116898 atgatatcaaaatgcagaatagta 116875
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 354      tgcatgcatgcacgcagcac 373
                ||||||||||||||||||||
Sbjct: 15527713 tgcatgcatgcacgcagcac 15527694



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     atgcatgcatgcacgcagca 372
               ||||||||||||||||||||
Sbjct: 7737780 atgcatgcatgcacgcagca 7737799
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>gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosome 14, complete
             sequence
          Length = 217754

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    atgataacaaaatgcagaatagta 35
             |||||| |||||||||||||||||
Sbjct: 59451 atgatatcaaaatgcagaatagta 59428
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>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete
             sequence
          Length = 115079

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   tgcatgcatgcacgcagcac 373
             ||||||||||||||||||||
Sbjct: 27264 tgcatgcatgcacgcagcac 27245
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>emb|CR974575.8| Mouse DNA sequence from clone RP23-77K24 on chromosome 12, complete
             sequence
          Length = 221107

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   tgttttgaatttaattctgt 130
             ||||||||||||||||||||
Sbjct: 62334 tgttttgaatttaattctgt 62353
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>gb|AC010799.15| Homo sapiens chromosome 15, clone RP11-40J8, complete sequence
          Length = 179508

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 110    ttgttttgaatttaattctgtgggcttc 137
              ||||||||||||||||||| || |||||
Sbjct: 178086 ttgttttgaatttaattctttgtgcttc 178113
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>emb|AL161630.12| Human DNA sequence from clone RP11-500B12 on chromosome 9 Contains a
             novel gene, a ribosomal protein L35a (RPL35A) and a CpG
             island. pseudogene, complete sequence
          Length = 200970

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   tgcatgcatgcacgcagcac 373
             ||||||||||||||||||||
Sbjct: 74780 tgcatgcatgcacgcagcac 74799
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>gb|AC127486.3| Homo sapiens chromosome 15, clone CTD-2012K22, complete sequence
          Length = 89716

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 110   ttgttttgaatttaattctgtgggcttc 137
             ||||||||||||||||||| || |||||
Sbjct: 72582 ttgttttgaatttaattctttgtgcttc 72555
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>gb|AC134698.10| Homo sapiens chromosome 8, clone RP11-359P18, complete sequence
          Length = 173305

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 606   tgtcaccatctctacttcat 625
             ||||||||||||||||||||
Sbjct: 34648 tgtcaccatctctacttcat 34667
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>gb|AC008556.5| Homo sapiens chromosome 19 clone CTC-526N19, complete sequence
          Length = 142515

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   tttgttttgaatttaattct 128
             ||||||||||||||||||||
Sbjct: 66401 tttgttttgaatttaattct 66420
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>gb|AC091565.10| Homo sapiens chromosome 15, clone RP11-228M15, complete sequence
          Length = 180741

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 110   ttgttttgaatttaattctgtgggcttc 137
             ||||||||||||||||||| || |||||
Sbjct: 66914 ttgttttgaatttaattctttgtgcttc 66887
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>gb|AC019322.8| Homo sapiens chromosome 15, clone RP11-382B18, complete sequence
          Length = 175205

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 110    ttgttttgaatttaattctgtgggcttc 137
              ||||||||||||||||||| || |||||
Sbjct: 129054 ttgttttgaatttaattctttgtgcttc 129081
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 354      tgcatgcatgcacgcagcac 373
                ||||||||||||||||||||
Sbjct: 15522247 tgcatgcatgcacgcagcac 15522228



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     atgcatgcatgcacgcagca 372
               ||||||||||||||||||||
Sbjct: 7735615 atgcatgcatgcacgcagca 7735634
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>gb|AC069235.23|AC069235 Homo sapiens 12 BAC RP11-173C20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 90500

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   ttgaatttaattctgtgggc 134
             ||||||||||||||||||||
Sbjct: 26248 ttgaatttaattctgtgggc 26229
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>gb|AF230636.7| Homo sapiens chromosome 8 clone RP4-801G19 map cen, complete sequence
          Length = 100712

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 606   tgtcaccatctctacttcat 625
             ||||||||||||||||||||
Sbjct: 18200 tgtcaccatctctacttcat 18219
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>gb|AC123768.8| Homo sapiens chromosome 15, clone RP11-1000B6, complete sequence
          Length = 186455

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 110   ttgttttgaatttaattctgtgggcttc 137
             ||||||||||||||||||| || |||||
Sbjct: 64286 ttgttttgaatttaattctttgtgcttc 64259
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>gb|AC026150.7| Homo sapiens chromosome 15, clone RP11-605N15, complete sequence
          Length = 116894

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 110   ttgttttgaatttaattctgtgggcttc 137
             ||||||||||||||||||| || |||||
Sbjct: 34945 ttgttttgaatttaattctttgtgcttc 34918
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>gb|AC022506.38| Homo sapiens 12 BAC RP11-181L23 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 172136

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 555  ccttttcctcagcctgcacc 574
            ||||||||||||||||||||
Sbjct: 3358 ccttttcctcagcctgcacc 3339
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>gb|AC135983.4| Homo sapiens chromosome 15, clone RP11-632K20, complete sequence
          Length = 173389

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 110   ttgttttgaatttaattctgtgggcttc 137
             ||||||||||||||||||| || |||||
Sbjct: 71773 ttgttttgaatttaattctttgtgcttc 71800
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>gb|BC035831.1| Homo sapiens, clone IMAGE:5581527, mRNA
          Length = 1342

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 555 ccttttcctcagcctgcacc 574
           ||||||||||||||||||||
Sbjct: 101 ccttttcctcagcctgcacc 120
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>gb|AC137568.8| Homo sapiens chromosome 15, clone RP11-1217C12, complete sequence
          Length = 199045

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 110   ttgttttgaatttaattctgtgggcttc 137
             ||||||||||||||||||| || |||||
Sbjct: 55190 ttgttttgaatttaattctttgtgcttc 55163
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>gb|AC138649.2| Homo sapiens chromosome 15, clone RP11-1180F24, complete sequence
          Length = 151800

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 110  ttgttttgaatttaattctgtgggcttc 137
            ||||||||||||||||||| || |||||
Sbjct: 6481 ttgttttgaatttaattctttgtgcttc 6508
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>gb|AC126610.12| Homo sapiens chromosome 15, clone RP11-733O21, complete sequence
          Length = 170362

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 110   ttgttttgaatttaattctgtgggcttc 137
             ||||||||||||||||||| || |||||
Sbjct: 90189 ttgttttgaatttaattctttgtgcttc 90216
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>emb|BX649462.9| Mouse DNA sequence from clone RP23-324J22 on chromosome 7, complete
             sequence
          Length = 157941

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   tttgttttgaatttaattct 128
             ||||||||||||||||||||
Sbjct: 75566 tttgttttgaatttaattct 75585
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>gb|AC111164.6| Homo sapiens chromosome 15, clone RP11-1109N12, complete sequence
          Length = 144563

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 110   ttgttttgaatttaattctgtgggcttc 137
             ||||||||||||||||||| || |||||
Sbjct: 66224 ttgttttgaatttaattctttgtgcttc 66251
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>emb|BX276103.13| Zebrafish DNA sequence from clone DKEY-7B17, complete sequence
          Length = 189322

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   attttgttttgaatttaatt 126
             ||||||||||||||||||||
Sbjct: 54133 attttgttttgaatttaatt 54152
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>emb|BX005059.4| Zebrafish DNA sequence from clone CH211-138A6, complete sequence
          Length = 194603

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    attttgttttgaatttaatt 126
              ||||||||||||||||||||
Sbjct: 179963 attttgttttgaatttaatt 179944
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>gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, complete sequence
          Length = 218103

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ataacaaaatgcagaatagt 34
              ||||||||||||||||||||
Sbjct: 156776 ataacaaaatgcagaatagt 156795
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>emb|CT571248.10| Mouse DNA sequence from clone RP24-355C16 on chromosome 16, complete
             sequence
          Length = 136128

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 248   gatcaggtgatctgggttcacaag 271
             ||||||||||||||||||| ||||
Sbjct: 54611 gatcaggtgatctgggttctcaag 54634
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>dbj|AP000445.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-78H16, complete
             sequences
          Length = 125356

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   attttgttttgaatttaatt 126
             ||||||||||||||||||||
Sbjct: 27894 attttgttttgaatttaatt 27875
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>dbj|AP001350.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-55A18, complete
              sequences
          Length = 142604

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    attttgttttgaatttaatt 126
              ||||||||||||||||||||
Sbjct: 108320 attttgttttgaatttaatt 108301
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>emb|CT030704.5| Mouse DNA sequence from clone RP24-317K15 on chromosome 14, complete
            sequence
          Length = 161533

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 12   atgataacaaaatgcagaatagta 35
            |||||| |||||||||||||||||
Sbjct: 5777 atgatatcaaaatgcagaatagta 5800
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>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0078P24, from chromosome 3, complete sequence
          Length = 146930

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 353    atgcatgcatgcacgcagca 372
              ||||||||||||||||||||
Sbjct: 115014 atgcatgcatgcacgcagca 114995
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>gb|AC124094.4| Homo sapiens chromosome 15, clone RP11-1203N1, complete sequence
          Length = 139165

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 110    ttgttttgaatttaattctgtgggcttc 137
              ||||||||||||||||||| || |||||
Sbjct: 121592 ttgttttgaatttaattctttgtgcttc 121619


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,446,943
Number of Sequences: 3902068
Number of extensions: 6446943
Number of successful extensions: 122538
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122152
Number of HSP's gapped (non-prelim): 386
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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