Clone Information

BLAST Search Result

Clone Name	rbags9e03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TTC7A_MOUSE (Q8BGB2) Tetratricopeptide repeat protein 7A (TPR re...	50	3e-06
2	TTC7A_HUMAN (Q9ULT0) Tetratricopeptide repeat protein 7A (TPR re...	50	3e-06
3	SPY_ARATH (Q96301) Probable UDP-N-acetylglucosamine--peptide N-a...	50	3e-06
4	SPY_PETHY (O82039) Probable UDP-N-acetylglucosamine--peptide N-a...	44	2e-04
5	SPY_LYCES (Q8RVB2) Probable UDP-N-acetylglucosamine--peptide N-a...	43	4e-04
6	TTC7B_HUMAN (Q86TV6) Tetratricopeptide repeat protein 7B (Tetrat...	41	0.002
7	TTC5_HUMAN (Q8N0Z6) Tetratricopeptide repeat protein 5 (TPR repe...	40	0.003
8	TTC5_RAT (Q5BK48) Tetratricopeptide repeat protein 5 (TPR repeat...	39	0.007
9	SSN6_YEAST (P14922) Glucose repression mediator protein	38	0.012
10	TTC5_MOUSE (Q99LG4) Tetratricopeptide repeat protein 5 (TPR repe...	38	0.012
11	OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide N-acetylglu...	37	0.027
12	OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide N-acetylgluco...	37	0.027
13	SPY_EUSGR (Q8LP10) Probable UDP-N-acetylglucosamine--peptide N-a...	36	0.046
14	SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide N-a...	34	0.23
15	CYCH_RHIME (P45400) Cytochrome c-type biogenesis protein cycH	32	0.66
16	Y1345_METJA (Q58741) Hypothetical protein MJ1345	32	0.87
17	FRZF_MYXXA (P31759) Protein methyltransferase frzF (EC 2.1.1.80)	32	1.1
18	YG49_SCHPO (O60184) Protein C23E6.09 in chromosome II	31	1.9
19	UTY_HUMAN (O14607) Ubiquitously transcribed Y chromosome tetratr...	30	2.5
20	UTX_HUMAN (O15550) Ubiquitously transcribed X chromosome tetratr...	30	2.5
21	UTX_MOUSE (O70546) Ubiquitously transcribed X chromosome tetratr...	30	2.5
22	PAF49_HUMAN (O15446) RNA polymerase I-associated factor PAF49 (A...	30	2.5
23	TRPB_GLOVI (Q7NGX9) Tryptophan synthase beta chain (EC 4.2.1.20)	30	3.3
24	IL2RA_PIG (O02733) Interleukin-2 receptor alpha chain precursor ...	30	3.3
25	UTY_PANTR (Q6B4Z3) Ubiquitously transcribed Y chromosome tetratr...	30	3.3
26	RPGF2_MOUSE (Q8CHG7) Rap guanine nucleotide exchange factor 2 (N...	30	3.3
27	Y941_METJA (Q57711) Hypothetical protein MJ0941	30	3.3
28	CDC27_HUMAN (P30260) Cell division cycle protein 27 homolog (CDC...	30	3.3
29	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	30	4.3
30	BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc...	30	4.3
31	BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-assoc...	30	4.3
32	BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa...	30	4.3
33	NETR_SAGLB (Q5G265) Neurotrypsin precursor (EC 3.4.21.-)	29	5.6
34	DDB2_MOUSE (Q99J79) DNA damage-binding protein 2 (Damage-specifi...	29	7.3
35	VSR7_ARATH (Q8L7E3) Vacuolar sorting receptor 7 precursor (AtVSR...	29	7.3
36	UTY_MOUSE (P79457) Ubiquitously transcribed Y chromosome tetratr...	29	7.3
37	PAC2_PSES3 (P15558) Penicillin acylase 2 precursor (EC 3.5.1.11)...	29	7.3
38	CCMH_HAEIN (P46458) Cytochrome c-type biogenesis protein ccmH pr...	29	7.3
39	TRM10_YARLI (Q6C1W9) tRNA (guanine-N(1)-)-methyltransferase (EC ...	28	9.6
40	TBX2_HUMAN (Q13207) T-box transcription factor TBX2 (T-box prote...	28	9.6
41	TBX2_CANFA (Q863A2) T-box transcription factor TBX2 (T-box prote...	28	9.6
42	IL2RA_MACMU (Q5MNY4) Interleukin-2 receptor alpha chain precurso...	28	9.6
43	TTC6_HUMAN (Q86TZ1) Tetratricopeptide repeat protein 6 (TPR repe...	28	9.6
44	SKI3_YEAST (P17883) Superkiller 3 protein	28	9.6
45	DDB2_HUMAN (Q92466) DNA damage-binding protein 2 (Damage-specifi...	28	9.6
46	TRPB1_AQUAE (O66923) Tryptophan synthase beta chain 1 (EC 4.2.1.20)	28	9.6
47	Y572_METJA (Q57992) Hypothetical protein MJ0572	28	9.6

>TTC7A_MOUSE (Q8BGB2) Tetratricopeptide repeat protein 7A (TPR repeat protein 7)|
          Length = 858

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 34/89 (38%), Positives = 45/89 (50%)
 Frame = -2

Query: 471  QHALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYL 292
            + A   Y  AL+   D V    S+G +LS+ G K L  A+  L DA+  + T   AW  L
Sbjct: 762  EEAKQLYKEALTVNPDGVRIMHSLGLMLSQLGHKSL--AQKVLRDAVERQSTFHEAWQGL 819

Query: 291  GQVHKHDGRLADAADCFQAASMLEESDPV 205
            G+V +  G+   A DCF  A  LE S PV
Sbjct: 820  GEVLQDQGQNEAAVDCFLTALELEASSPV 848

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>TTC7A_HUMAN (Q9ULT0) Tetratricopeptide repeat protein 7A (TPR repeat protein 7)|
          Length = 858

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 34/89 (38%), Positives = 45/89 (50%)
 Frame = -2

Query: 471  QHALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYL 292
            + A   Y  AL+   D V    S+G +LS+ G K L  A+  L DA+  + T   AW  L
Sbjct: 762  EEAKQLYKEALTVNPDGVRIMHSLGLMLSRLGHKSL--AQKVLRDAVERQSTCHEAWQGL 819

Query: 291  GQVHKHDGRLADAADCFQAASMLEESDPV 205
            G+V +  G+   A DCF  A  LE S PV
Sbjct: 820  GEVLQAQGQNEAAVDCFLTALELEASSPV 848

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>SPY_ARATH (Q96301) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-)
          Length = 914

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQ 286
           ALA Y   L  +  +V + +  G  L  Q    L  A    S+A+RL+P N  A  + G 
Sbjct: 62  ALALYEAMLEKDSKNVEAHIGKGICLQTQNKGNL--AFDCFSEAIRLDPHNACALTHCGI 119

Query: 285 VHKHDGRLADAADCFQAASMLEES--DPVESLRLL*SSSGTDLR 160
           +HK +GRL +AA+ +Q A M + S     E L ++ +  GT L+
Sbjct: 120 LHKEEGRLVEAAESYQKALMADASYKPAAECLAIVLTDLGTSLK 163

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>SPY_PETHY (O82039) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-)
           (PhSPY)
          Length = 932

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQ 286
           ALA Y + L  +   + S +  G  L  Q    L  A    ++A++L+P N  A  + G 
Sbjct: 67  ALAIYESVLQKDSGSIESLIGKGICLQMQNMGRL--AFESFAEAIKLDPQNACALTHCGI 124

Query: 285 VHKHDGRLADAADCFQAASMLEES--DPVESLRLL*SSSGTDLR 160
           ++K +GRL +AA+ +Q A   + S     E L ++ +  GT L+
Sbjct: 125 LYKDEGRLVEAAESYQKALKADPSYKPAAECLAIVLTDIGTSLK 168

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>SPY_LYCES (Q8RVB2) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-)
           (LeSPY)
          Length = 931

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQ 286
           ALA Y + L  +   + S +  G  L  Q    L  A    S+A++++P N  A  + G 
Sbjct: 67  ALAIYESVLEKDSKSIESLIGKGICLQMQNTGRL--AFESFSEAIKVDPQNACALTHCGI 124

Query: 285 VHKHDGRLADAADCFQAASMLEES--DPVESLRLL*SSSGTDLR 160
           ++K +GRL +AA+ ++ A   + S     E L ++ +  GT L+
Sbjct: 125 LYKDEGRLVEAAESYEKALKADPSYTPAAECLAIVLTDIGTSLK 168

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>TTC7B_HUMAN (Q86TV6) Tetratricopeptide repeat protein 7B (Tetratricopeptide|
           repeat protein 7-like-1)
          Length = 741

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 28/82 (34%), Positives = 38/82 (46%)
 Frame = -2

Query: 453 YLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQVHKH 274
           Y  AL+    HV S   +  +L + G   L  A   L DA+++  T    W  LG+V + 
Sbjct: 651 YEEALAISPTHVKSMQRLALILHQLGRYSL--AEKILRDAVQVNSTAHEVWNGLGEVLQA 708

Query: 273 DGRLADAADCFQAASMLEESDP 208
            G  A A +CF  A  LE S P
Sbjct: 709 QGNDAAATECFLTALELEASSP 730

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>TTC5_HUMAN (Q8N0Z6) Tetratricopeptide repeat protein 5 (TPR repeat protein 5)|
          Length = 440

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = -2

Query: 450 LNALSTEVDHVPSKVSIGALLSKQ---GPKYLPVARSYLSDALRLEPTNRMAWFYLGQVH 280
           L  +   V  V  K  +  L  K     P Y P A   LS A++LEP    AW  LG+V+
Sbjct: 54  LQQMEEVVGSVQGKAQVLMLTGKALNVTPDYSPKAEELLSKAVKLEPELVEAWNQLGEVY 113

Query: 279 KHDGRLADAADCFQAA 232
              G +A A  CF  A
Sbjct: 114 WKKGDVAAAHTCFSGA 129

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>TTC5_RAT (Q5BK48) Tetratricopeptide repeat protein 5 (TPR repeat protein 5)|
          Length = 440

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 21/48 (43%), Positives = 26/48 (54%)
 Frame = -2

Query: 375 PKYLPVARSYLSDALRLEPTNRMAWFYLGQVHKHDGRLADAADCFQAA 232
           P Y P A   LS A++LEP    AW  LG+V+   G +A A  CF  A
Sbjct: 82  PDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGA 129

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>SSN6_YEAST (P14922) Glucose repression mediator protein|
          Length = 966

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = -2

Query: 471 QHALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARS--YLSDALRLEPTNRMAWF 298
           Q A  AY + L+    H      +G L      ++    ++  YL  +L  +P++   W+
Sbjct: 241 QGAKEAYEHVLAQNQHHAKVLQQLGCLYGMSNVQFYDPQKALDYLLKSLEADPSDATTWY 300

Query: 297 YLGQVHKHDGRLADAADCFQAASMLEESDPV 205
           +LG+VH        A D FQ A   +  +P+
Sbjct: 301 HLGRVHMIRTDYTAAYDAFQQAVNRDSRNPI 331



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = -2

Query: 480 EQTQHALAAYLNALSTEVDHVPSKV--SIGALLSKQGPKYLPVARSYLSDALRLEPTNRM 307
           +  Q A  AY  AL    +    K+   IG L  + G   L  A    +  L L+P    
Sbjct: 128 DDLQRAYNAYQQALYHLSNPNVPKLWHGIGILYDRYGS--LDYAEEAFAKVLELDPHFEK 185

Query: 306 A---WFYLGQVHKHDGRLADAADCFQ 238
           A   +F LG ++KH G+ + A +CF+
Sbjct: 186 ANEIYFRLGIIYKHQGKWSQALECFR 211

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>TTC5_MOUSE (Q99LG4) Tetratricopeptide repeat protein 5 (TPR repeat protein 5)|
          Length = 440

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -2

Query: 375 PKYLPVARSYLSDALRLEPTNRMAWFYLGQVHKHDGRLADAADCFQAA 232
           P Y P A   LS A++LEP    AW  LG+V+   G +  A  CF  A
Sbjct: 82  PDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGA 129

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>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1046

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 25/81 (30%), Positives = 39/81 (48%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQ 286
           A+AAYL ALS   +H     ++  +  +QG   + +A      A+ L+P    A+  L  
Sbjct: 244 AVAAYLRALSLSPNHAVVHGNLACVYYEQG--LIDLAIDTYRRAIELQPHFPDAYCNLAN 301

Query: 285 VHKHDGRLADAADCFQAASML 223
             K  G +A+A DC+  A  L
Sbjct: 302 ALKEKGSVAEAEDCYNTALRL 322



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/80 (23%), Positives = 36/80 (45%)
 Frame = -2

Query: 471 QHALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYL 292
           + A+  Y  AL    +   +  ++ ++L +QG   L  A  +  +A+R+ PT   A+  +
Sbjct: 344 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK--LQEALMHYKEAIRISPTFADAYSNM 401

Query: 291 GQVHKHDGRLADAADCFQAA 232
           G   K    +  A  C+  A
Sbjct: 402 GNTLKEMQDVQGALQCYTRA 421

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>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1036

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 25/81 (30%), Positives = 39/81 (48%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQ 286
           A+AAYL ALS   +H     ++  +  +QG   + +A      A+ L+P    A+  L  
Sbjct: 234 AVAAYLRALSLSPNHAVVHGNLACVYYEQG--LIDLAIDTYRRAIELQPHFPDAYCNLAN 291

Query: 285 VHKHDGRLADAADCFQAASML 223
             K  G +A+A DC+  A  L
Sbjct: 292 ALKEKGSVAEAEDCYNTALRL 312



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/80 (23%), Positives = 36/80 (45%)
 Frame = -2

Query: 471 QHALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYL 292
           + A+  Y  AL    +   +  ++ ++L +QG   L  A  +  +A+R+ PT   A+  +
Sbjct: 334 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK--LQEALMHYKEAIRISPTFADAYSNM 391

Query: 291 GQVHKHDGRLADAADCFQAA 232
           G   K    +  A  C+  A
Sbjct: 392 GNTLKEMQDVQGALQCYTRA 411

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>SPY_EUSGR (Q8LP10) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-)
           (EgSPY)
          Length = 918

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQ 286
           ALA Y   L  +  +V + +  G  L  Q    L  A    S+A+RL+P N  A  + G 
Sbjct: 53  ALAIY--ELEKDSKNVEAHIGKGICLQTQNKGNL--AFDCFSEAIRLDPHNACALTHCGI 108

Query: 285 VHKHDGRLADAADCFQAASMLEES--DPVESLRLL*SSSGTDLR 160
           ++K +GRL +AA  +Q A   + S     E L  + +  GT L+
Sbjct: 109 LYKDEGRLVEAAS-YQKALQADPSYKPAAECLATVLNDLGTSLK 151

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>SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SEC (EC 2.4.1.-)
           (Protein SECRET AGENT)
          Length = 977

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 23/78 (29%), Positives = 38/78 (48%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQ 286
           A + YL A+  +     +  ++  L  + G   L  A  Y  +A++L+P    A+  LG 
Sbjct: 208 AYSCYLEAVRIQPTFAIAWSNLAGLFMESGD--LNRALQYYKEAVKLKPAFPDAYLNLGN 265

Query: 285 VHKHDGRLADAADCFQAA 232
           V+K  GR  +A  C+Q A
Sbjct: 266 VYKALGRPTEAIMCYQHA 283



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 25/85 (29%), Positives = 40/85 (47%)
 Frame = -2

Query: 444 ALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQVHKHDGR 265
           ALS     V +  ++G L+  QG   +  A S   +A+R++PT  +AW  L  +    G 
Sbjct: 181 ALSLNPLLVDAHSNLGNLMKAQG--LIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGD 238

Query: 264 LADAADCFQAASMLEESDPVESLRL 190
           L  A   ++ A  L+ + P   L L
Sbjct: 239 LNRALQYYKEAVKLKPAFPDAYLNL 263



 Score = 30.0 bits (66), Expect = 3.3
 Identities = 22/86 (25%), Positives = 39/86 (45%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQ 286
           A+  Y +AL    +   +  +I ++  +QG   L +A  +   AL  +P    A+  LG 
Sbjct: 276 AIMCYQHALQMRPNSAMAFGNIASIYYEQGQ--LDLAIRHYKQALSRDPRFLEAYNNLGN 333

Query: 285 VHKHDGRLADAADCFQAASMLEESDP 208
             K  GR+ +A  C+     L+ + P
Sbjct: 334 ALKDIGRVDEAVRCYNQCLALQPNHP 359



 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 348 YLSDALRLEPTNRMAWFYLGQVHKHDGRLADAADCFQAASML 223
           Y   A+ L P    AW  L   +   GRL++A  C Q A  L
Sbjct: 143 YYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALSL 184

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>CYCH_RHIME (P45400) Cytochrome c-type biogenesis protein cycH|
          Length = 381

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVS--IGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYL 292
           A+AAY  A+   +   P+++     AL+++ G      A++ L  AL L+P +  + FYL
Sbjct: 173 AVAAYDRAIRL-LGPTPARMGGYAEALVAQAGGLVTAEAQNALQKALALDPDDPRSAFYL 231

Query: 291 GQVHKHDGRLADAADCFQAASMLEESDPVES 199
               K +G+ A+A   F+    L ES P ++
Sbjct: 232 ALGLKQEGKHAEALAAFR---KLAESSPADA 259

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>Y1345_METJA (Q58741) Hypothetical protein MJ1345|
          Length = 314

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 20/87 (22%), Positives = 35/87 (40%)
 Frame = -2

Query: 471 QHALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYL 292
           + A   +L     E   +P K     +L K G      A   +   L+  P + +AW   
Sbjct: 96  EEAKEVFLKLCRLEKSDLPVKYVTAFILKKLGE--YDYALKIIDKILKKYPKSAIAWAEK 153

Query: 291 GQVHKHDGRLADAADCFQAASMLEESD 211
           G++   +G+L  + +CF  A  +   D
Sbjct: 154 GEILYREGKLKKSLECFDNALKINPKD 180



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 357 ARSYLSDALRLEPTNRMAWFYLGQVHKHDGRLADAADCFQAASMLEESD 211
           A  Y   AL+L+P   +A F  G +    G+L +A + F     LE+SD
Sbjct: 64  ALEYFDKALKLKPKYILANFLKGALLVSLGKLEEAKEVFLKLCRLEKSD 112

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>FRZF_MYXXA (P31759) Protein methyltransferase frzF (EC 2.1.1.80)|
          Length = 593

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 24/63 (38%), Positives = 32/63 (50%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQ 286
           A  A+  A+  E   V ++V  G    + G   L  ARS LS AL LEPT  +  + L Q
Sbjct: 476 AREAFAQAIQREPLCVEARVFGGVAALQAGE--LSEARSELSKALFLEPTLAIGHYLLAQ 533

Query: 285 VHK 277
           VH+
Sbjct: 534 VHE 536

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>YG49_SCHPO (O60184) Protein C23E6.09 in chromosome II|
          Length = 1102

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = -2

Query: 465 ALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYL--PVARSYLSDALRLEPTNRMAWFYL 292
           A  AY   L+   +H      +G L  +Q   +    +A  YL+ +L  + T+  +W+ +
Sbjct: 531 AKEAYERVLAETPNHAKVLQQLGWLCHQQSSSFTNQDLAIQYLTKSLEADDTDAQSWYLI 590

Query: 291 GQVHKHDGRLADAADCFQAASMLEESDP 208
           G+ +    +   A + +Q A   +  +P
Sbjct: 591 GRCYVAQQKYNKAYEAYQQAVYRDGRNP 618

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>UTY_HUMAN (O14607) Ubiquitously transcribed Y chromosome tetratricopeptide|
           repeat protein (Ubiquitously transcribed TPR protein on
           the Y chromosome)
          Length = 1347

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 357 ARSYLSDALRLEPTNRMAWFYLGQVHKHDGRLADA 253
           A  YL  +L  +P +  +W++LG+ +   G++ DA
Sbjct: 266 AIQYLQKSLEADPNSGQSWYFLGRCYSSIGKVQDA 300

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>UTX_HUMAN (O15550) Ubiquitously transcribed X chromosome tetratricopeptide|
           repeat protein (Ubiquitously transcribed TPR protein on
           the X chromosome)
          Length = 1401

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 357 ARSYLSDALRLEPTNRMAWFYLGQVHKHDGRLADA 253
           A  YL  +L  +P +  +W++LG+ +   G++ DA
Sbjct: 269 AIQYLQKSLEADPNSGQSWYFLGRCYSSIGKVQDA 303

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>UTX_MOUSE (O70546) Ubiquitously transcribed X chromosome tetratricopeptide|
           repeat protein (Ubiquitously transcribed TPR protein on
           the X chromosome) (Fragment)
          Length = 1333

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 357 ARSYLSDALRLEPTNRMAWFYLGQVHKHDGRLADA 253
           A  YL  +L  +P +  +W++LG+ +   G++ DA
Sbjct: 203 AIQYLQKSLEADPNSGQSWYFLGRCYSSIGKVQDA 237

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>PAF49_HUMAN (O15446) RNA polymerase I-associated factor PAF49 (Anti-sense to|
           ERCC-1 protein) (ASE-1) (CD3-epsilon-associated protein)
           (CD3E-associated protein) (CAST)
          Length = 510

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = +3

Query: 66  QDTGSQPQISAQLCTPKKEEEKENWPTKKKETSSQFRMTIRAVGDFLPGPIPRASRPPES 245
           Q  G++PQ  A L  PKK+ +KE      K+  +        VG  LP  +   + P  +
Sbjct: 368 QPEGAKPQAQAALAAPKKKTKKE------KQQDATVEPETEVVGPELPDDLEPQAAPTST 421

Query: 246 NRRHQLASR 272
            ++ +   R
Sbjct: 422 KKKKKKKER 430

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>TRPB_GLOVI (Q7NGX9) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 414

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +1

Query: 223 EHRGRLKAIGGIS*PPVMLVDLS*VEPGHPVRRLEP*GIREIAPRHREILG---PLFRQE 393
           + RGR    GG   P  ++  L+ +E      R +P  + E A   R+ +G   PL+  E
Sbjct: 21  DSRGRFGRFGGQYVPETLMSALAQLEAAFNQYRHDPQFLAEFAGHLRDFVGRPTPLYFAE 80

Query: 394 STDGYLGWYMIYLRRE 441
               + G   I+L+RE
Sbjct: 81  RLTAHWGGGRIFLKRE 96

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>IL2RA_PIG (O02733) Interleukin-2 receptor alpha chain precursor (IL-2|
           receptor alpha subunit) (IL-2-RA) (IL2-RA) (CD25
           antigen)
          Length = 270

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +3

Query: 9   SNHYSICR-QQQHAQWLLRIQDTG-SQPQISAQLCTPKKEEEKENWPTKKKETSSQFR 176
           S  Y ICR    H+ W  + Q    S P+I  +  TP+ EE+KE    K  ET  Q +
Sbjct: 61  SGPYMICRGNSSHSFWENKCQCMPTSSPRIPVKQVTPRPEEQKER---KTTETQGQMQ 115

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>UTY_PANTR (Q6B4Z3) Ubiquitously transcribed Y chromosome tetratricopeptide|
           repeat protein (Ubiquitously transcribed TPR protein on
           the Y chromosome)
          Length = 1079

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 348 YLSDALRLEPTNRMAWFYLGQVHKHDGRLADA 253
           YL  +L  +P +  +W++LG+ +   G++ DA
Sbjct: 269 YLQKSLEADPNSGQSWYFLGRCYSSIGKVQDA 300

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>RPGF2_MOUSE (Q8CHG7) Rap guanine nucleotide exchange factor 2 (Neural RAP guanine|
            nucleotide exchange protein) (nRap GEP) (PDZ
            domain-containing guanine nucleotide exchange factor 1)
            (PDZ-GEF1) (Fragment)
          Length = 1138

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +3

Query: 192  VGDFLPGPIPRASRPPESN---RRHQLASRHACGPVLGRTRPSGS*ARALGHPRDSSSPQ 362
            + DF  GP   A +PP+ N   +R ++ +R    P  G+T P      A    R  S PQ
Sbjct: 1052 IADFPEGPCHPARKPPDYNVALQRSRMVARPTEAPAPGQTPP------AAAASRPGSKPQ 1105

Query: 363  GDTWALVSTGEHRWIPW 413
               W   S  + R  P+
Sbjct: 1106 ---WHKPSDADPRLAPF 1119

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>Y941_METJA (Q57711) Hypothetical protein MJ0941|
          Length = 338

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = -2

Query: 444 ALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQVHKHDGR 265
           AL  E D   +    G  LS +G   +  A +   + L  E  N + W ++GQ++   G 
Sbjct: 55  ALELEPDFYLALFLKGLALSAKGE--IKEAITTFEELLSYESKNPITWVFVGQLYGMSGN 112

Query: 264 LADAADCFQAASMLE 220
             +A  C+  A  +E
Sbjct: 113 CDEALKCYNKALGIE 127



 Score = 29.6 bits (65), Expect = 4.3
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -2

Query: 462 LAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAWFYLGQV 283
           L  Y   L+   + VP  V    +L K G +Y   A   L+ AL L+P ++ A +  G +
Sbjct: 151 LKCYNEVLTYTPNFVPMWVKKAEILRKLG-RYED-ALLCLNRALELKPHDKNALYLKGVL 208

Query: 282 HKHDGRLADAADCFQ 238
            K  G+  +A +CF+
Sbjct: 209 LKRMGKFREALECFK 223



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/46 (21%), Positives = 25/46 (54%)
 Frame = -2

Query: 357 ARSYLSDALRLEPTNRMAWFYLGQVHKHDGRLADAADCFQAASMLE 220
           A  Y++  L +   +   W++ G++++  G+L +A  C++    L+
Sbjct: 253 AERYINIGLEIRKDDVALWYFKGELYERLGKLDEALKCYEKVIELQ 298

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>CDC27_HUMAN (P30260) Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC)|
          Length = 824

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 20/92 (21%), Positives = 40/92 (43%)
 Frame = -2

Query: 480 EQTQHALAAYLNALSTEVDHVPSKVSIGALLSKQGPKYLPVARSYLSDALRLEPTNRMAW 301
           E+   ALA + NA+     H  +   +G +  KQ  +   +A  +   AL + P + +  
Sbjct: 615 EELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQ--EKFSLAEMHFQKALDINPQSSVLL 672

Query: 300 FYLGQVHKHDGRLADAADCFQAASMLEESDPV 205
            ++G V     +   A D    A +++  +P+
Sbjct: 673 CHIGVVQHALKKSEKALDTLNKAIVIDPKNPL 704

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2157

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
 Frame = +3

Query: 75  GSQPQISAQLCTPKK-EEEKENWPTKKKETSSQFRMTIRAVGDFLPGPIPRASRPPESNR 251
           G  P      C P   E+E E W  ++K++SS+  + +               R  E  R
Sbjct: 427 GDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERA----------RRRREEEER 476

Query: 252 RHQLASRHACGPVLGR 299
           R Q   R AC   L R
Sbjct: 477 RMQEERRAACAEKLKR 492

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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2160

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
 Frame = +3

Query: 75  GSQPQISAQLCTPKK-EEEKENWPTKKKETSSQFRMTIRAVGDFLPGPIPRASRPPESNR 251
           G  P      C P   E+E E W  ++K++SS+  + +               R  E  R
Sbjct: 427 GDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERA----------RRRREEEER 476

Query: 252 RHQLASRHACGPVLGR 299
           R Q   R AC   L R
Sbjct: 477 RMQEERRAACAEKLKR 492

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>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2158

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
 Frame = +3

Query: 75  GSQPQISAQLCTPKK-EEEKENWPTKKKETSSQFRMTIRAVGDFLPGPIPRASRPPESNR 251
           G  P      C P   E+E E W  ++K++SS+  + +               R  E  R
Sbjct: 425 GDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERA----------RRRREEEER 474

Query: 252 RHQLASRHACGPVLGR 299
           R Q   R AC   L R
Sbjct: 475 RMQEERRAACAEKLKR 490

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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2161

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
 Frame = +3

Query: 75  GSQPQISAQLCTPKK-EEEKENWPTKKKETSSQFRMTIRAVGDFLPGPIPRASRPPESNR 251
           G  P      C P   E+E E W  ++K++SS+  + +               R  E  R
Sbjct: 426 GDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERA----------RRRREEEER 475

Query: 252 RHQLASRHACGPVLGR 299
           R Q   R AC   L R
Sbjct: 476 RMQEERRAACAEKLKR 491

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>NETR_SAGLB (Q5G265) Neurotrypsin precursor (EC 3.4.21.-)|
          Length = 875

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
 Frame = +3

Query: 207 PGPIPRASRPPE---SNRRHQLASRHACGPVLGRTRPSGS*ARALGHPRDSSSPQGDTWA 377
           P P+PR  RPP    + R H L + H   P                HPR    P G+ W 
Sbjct: 59  PPPLPRFPRPPRALPALRPHALQAGHTPEP----------------HPR--GCPAGEPWV 100

Query: 378 LVSTGEHRWIPWMVHDLPPSRVHSS 452
            V+      + W   ++PPS   SS
Sbjct: 101 SVTDFGAPCLRWA--EVPPSLERSS 123

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>DDB2_MOUSE (Q99J79) DNA damage-binding protein 2 (Damage-specific DNA-binding|
           protein 2)
          Length = 432

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 425 IMYHPRYPSVLSCRNKGPSISLWRGAISRMP 333
           + +HP +PS L+  +KG  I +W   I   P
Sbjct: 117 LAWHPTHPSTLAVGSKGGDIMIWNFGIKDKP 147

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>VSR7_ARATH (Q8L7E3) Vacuolar sorting receptor 7 precursor (AtVSR7) (Epidermal|
           growth factor receptor-like protein 3) (AtELP3)
           (BP80-like protein f) (AtBP80f)
          Length = 625

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 8/53 (15%)
 Frame = -1

Query: 436 DGGRSCTIQGIHRC--------SPVETRAQVSPCGEELSLGCPKARAYEPDGL 302
           DG  SCT  G  RC        S        S C + +S GC     ++ DGL
Sbjct: 458 DGYTSCTPYGPARCTMNNGGCWSDTRNGLTFSACSDSVSTGCKCPEGFQGDGL 510

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>UTY_MOUSE (P79457) Ubiquitously transcribed Y chromosome tetratricopeptide|
           repeat protein (Ubiquitously transcribed TPR protein ON
           the Y chromosome) (Male-specific histocompatibility
           antigen H-YDB)
          Length = 1212

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 357 ARSYLSDALRLEPTNRMAWFYLGQVHKHDGRLADA 253
           A  YL  +L  +P +  +W++LG+ +   G++ DA
Sbjct: 264 AIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDA 298

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>PAC2_PSES3 (P15558) Penicillin acylase 2 precursor (EC 3.5.1.11) (Penicillin|
           acylase II) (Penicillin amidase II) (Cephalosporin
           acylase II) [Contains: Penicillin acylase 2 small
           subunit (Penicillin acylase II small subunit);
           Penicillin acylase 2 large su
          Length = 773

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +3

Query: 309 SGS*ARALGH---PRDSSSPQGDTWALVS--TGEHRWIPWMVHDLPP 434
           +G  A ++GH    R  S P+ + W  V   +GEH W  W+ H+  P
Sbjct: 420 AGDVAGSIGHLVRARVPSRPRENGWLPVPGWSGEHEWRGWIPHEAMP 466

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>CCMH_HAEIN (P46458) Cytochrome c-type biogenesis protein ccmH precursor|
          Length = 459

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -2

Query: 342 SDALRLE----PTNRMAWFYLGQVHKHDGRLADAADCFQAASMLE 220
           S ALR++    PT+   W+ LGQ+  + G    A D +Q A+ LE
Sbjct: 308 STALRIDLQKNPTDAKKWWMLGQIGMNLGDARLAFDSYQKANKLE 352

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>TRM10_YARLI (Q6C1W9) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31) (tRNA|
           methyltransferase 10)
          Length = 371

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
 Frame = +3

Query: 114 KKEEEKENWPTKK---------KETSSQFRMTIRAVGDFLPGPIPRASRPPES 245
           KK ++K  W +KK         K+ +++ R  +      +P PIP+  RPP++
Sbjct: 62  KKAQKKAIWESKKDEIAAVKKEKKKAARKRKQLAISRGEIPAPIPQDERPPQT 114

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>TBX2_HUMAN (Q13207) T-box transcription factor TBX2 (T-box protein 2)|
          Length = 702

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 343 LGCPKARAYEPDGLVLPRTGPQA*REAS*CRRLLSGGLDARGIGPGRKSP 194
           +G P   A  P G     +  +A  E    +RL+SG    R + PGR+SP
Sbjct: 657 VGAPSRGALSPSG-----SAKEAANELQSIQRLVSGLESQRALSPGRESP 701

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>TBX2_CANFA (Q863A2) T-box transcription factor TBX2 (T-box protein 2)|
          Length = 702

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -1

Query: 343 LGCPKARAYEPDGLVLPRTGPQA*REAS*CRRLLSGGLDARGIGPGRKSP 194
           +G P   A  P G     +  +A  E    +RL+SG  + R + PGR+SP
Sbjct: 657 VGAPSRGALSPSG-----SAKEAASELQSIQRLVSGLENQRALSPGRESP 701

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>IL2RA_MACMU (Q5MNY4) Interleukin-2 receptor alpha chain precursor (IL-2|
           receptor alpha subunit) (IL-2-RA) (IL2-RA) (CD25
           antigen)
          Length = 272

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 18  YSICR-QQQHAQWLLRIQDTGSQPQISAQLCTPKKEEEKENWPTKKKETSSQFRM 179
           Y +C     H+ W  + Q T S  + + +  TP+ EE+KE    K  E  SQ ++
Sbjct: 64  YMLCTGNSSHSSWDNQCQCTSSAARNTTKQVTPQPEEQKER---KTTEMQSQMQL 115

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>TTC6_HUMAN (Q86TZ1) Tetratricopeptide repeat protein 6 (TPR repeat protein 6)|
          Length = 520

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 339 DALRLEPTNRMAWFYLGQVHKHDGRLADAADCFQAA 232
           DA+ L P   +A+F  G ++ H  + + A+D F  A
Sbjct: 373 DAITLNPKYSLAYFNAGNIYFHHRQFSQASDYFSKA 408

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>SKI3_YEAST (P17883) Superkiller 3 protein|
          Length = 1432

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 348 YLSDALRLEPTNRMAWFYLGQVHKHDGRLADAADCFQAASMLEES 214
           +   ALR++P +  +W  LGQ +   GR+  +   F  A  L  S
Sbjct: 724 WFQSALRVDPNDVESWVGLGQAYHACGRIEASIKVFDKAIQLRPS 768

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>DDB2_HUMAN (Q92466) DNA damage-binding protein 2 (Damage-specific DNA-binding|
           protein 2) (DDB p48 subunit) (DDBb) (UV-damaged
           DNA-binding protein 2) (UV-DDB 2)
          Length = 427

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 425 IMYHPRYPSVLSCRNKGPSISLWRGAISRMP 333
           + +HP +PS ++  +KG  I LW   I   P
Sbjct: 117 LAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP 147

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>TRPB1_AQUAE (O66923) Tryptophan synthase beta chain 1 (EC 4.2.1.20)|
          Length = 397

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = +1

Query: 223 EHRGRLKAIGGIS*PPVMLVDLS*VEPGHPVRRLEP*GIREIAPRHREILG---PLFRQE 393
           + RG     GG   P  ++  L  +E  +   + +P   +E+    RE  G   PL+  E
Sbjct: 6   DERGYFGPFGGKFVPETLMYALEELEEKYRELKSDPEFQKELDYYLREYAGRPTPLYFAE 65

Query: 394 STDGYLGWYMIYLRRE 441
               Y+G   IYL+RE
Sbjct: 66  KLTKYVGGAKIYLKRE 81

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>Y572_METJA (Q57992) Hypothetical protein MJ0572|
          Length = 86

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 357 ARSYLSDALRLEPTNRMAWFYLGQVHKHDGRLADAADCF 241
           A  Y + A+ L P  R AWF      +  GR  +A +CF
Sbjct: 27  ALEYFNKAIELNPFYRDAWFNKALALRILGRYEEARECF 65


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,522,124
Number of Sequences: 219361
Number of extensions: 1424046
Number of successful extensions: 4711
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 4458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4701
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result