Clone Name | rbags9d19 |
---|---|
Clone Library Name | barley_pub |
>gb|AY613901.1| Mesenchytraeus solifugus clone C162 troponin-like mRNA, partial sequence Length = 590 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gatgtcggcggccgagctgtt 185 ||||||||||||||||||||| Sbjct: 85 gatgtcggcggccgagctgtt 65
>ref|XM_458458.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C18909g) partial mRNA Length = 1872 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 ttccaccaactgctgcttcat 218 ||||||||||||||||||||| Sbjct: 348 ttccaccaactgctgcttcat 328
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 ttccaccaactgctgcttcat 218 ||||||||||||||||||||| Sbjct: 1561171 ttccaccaactgctgcttcat 1561151
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 cgtcgatgtcggcggccgagc 181 ||||||||||||||||||||| Sbjct: 157330 cgtcgatgtcggcggccgagc 157310
>emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 7/17 Length = 348813 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 ctgctgcttcatcttggccga 227 ||||||||||||||||||||| Sbjct: 28990 ctgctgcttcatcttggccga 29010
>gb|AC112031.4| Rattus norvegicus BAC CH230-99K18 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 242158 Score = 42.1 bits (21), Expect = 0.75 Identities = 24/25 (96%) Strand = Plus / Minus Query: 207 ctgctgcttcatcttggccgaggtg 231 ||||| ||||||||||||||||||| Sbjct: 108743 ctgcttcttcatcttggccgaggtg 108719
>gb|AE005135.1| Halobacterium sp. NRC-1 section 166 of 170 of the complete genome Length = 10922 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 gcttcgtcgtcgatgtcggcg 174 ||||||||||||||||||||| Sbjct: 4083 gcttcgtcgtcgatgtcggcg 4063
>ref|XM_365055.1| Magnaporthe grisea 70-15 hypothetical protein (MG09900.4) partial mRNA Length = 600 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tcgtcgtcgatgtcggcggccgag 180 |||||||| ||||||||||||||| Sbjct: 362 tcgtcgtcaatgtcggcggccgag 339
>gb|DQ334245.1| Drosophila miranda CG9279 gene, partial cds Length = 999 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ctgctgcttcatcttggccg 226 |||||||||||||||||||| Sbjct: 909 ctgctgcttcatcttggccg 890
>emb|AL158149.14| Human DNA sequence from clone RP11-208G24 on chromosome 9 Contains the GAS1 gene for growth arrest-specific 1, the 5' end of a novel gene and a CpG island, complete sequence Length = 102100 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 accaactgctgcttcatctt 221 |||||||||||||||||||| Sbjct: 2654 accaactgctgcttcatctt 2673
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tcgtcgtcgatgtcggcggc 176 |||||||||||||||||||| Sbjct: 1170793 tcgtcgtcgatgtcggcggc 1170774
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cgtcgatgtcggcggccgag 180 |||||||||||||||||||| Sbjct: 68315 cgtcgatgtcggcggccgag 68296 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,273,399 Number of Sequences: 3902068 Number of extensions: 1273399 Number of successful extensions: 22823 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 22724 Number of HSP's gapped (non-prelim): 99 length of query: 231 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 209 effective length of database: 17,147,199,772 effective search space: 3583764752348 effective search space used: 3583764752348 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)