ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9d17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MAN1_YEAST (P22855) Alpha-mannosidase (EC 3.2.1.24) (Alpha-D-man... 30 7.2

>MAN1_YEAST (P22855) Alpha-mannosidase (EC 3.2.1.24) (Alpha-D-mannoside|
           mannohydrolase)
          Length = 1083

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -2

Query: 230 LYSFSSLKYVSGPFTVPVLSYTVSKCA---NFVICKQCIITTVMS 105
           LYS +  KYV+ P  V V   T  KCA    F I ++C I +V+S
Sbjct: 769 LYSVNQYKYVTKPKKVQVSCNTKEKCAVEVIFQISEKCKIKSVIS 813


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,220,110
Number of Sequences: 219361
Number of extensions: 2210600
Number of successful extensions: 5476
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5475
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7082949625
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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