ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63p24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063D15, full insert sequence Length = 2410 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 331 tctgcataaacccatgcaatttcatgctcacccaactt 368 ||||||| ||||||||||||||||||||||||||||| Sbjct: 1993 tctgcatctacccatgcaatttcatgctcacccaactt 1956
>gb|BT024043.1| Zea mays clone EL01N0430B08 mRNA sequence Length = 1329 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 323 ttccagcttctgcataaacccatgcaatttcatgctcacccaactt 368 ||||| ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 673 ttccaacttctgcatccacccaagcaatttcatgctcacccaactt 628
>dbj|AK063384.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-G05, full insert sequence Length = 2501 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 331 tctgcataaacccatgcaatttcatgctcacccaactt 368 ||||||| ||||||||||||||||||||||||||||| Sbjct: 1988 tctgcatctacccatgcaatttcatgctcacccaactt 1951
>gb|AY110597.1| Zea mays CL317_1 mRNA sequence Length = 2279 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 323 ttccagcttctgcataaacccatgcaatttcatgctcacccaactt 368 ||||| ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1394 ttccaacttctgcatccacccaagcaatttcatgctcacccaactt 1349
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 331 tctgcataaacccatgcaatttcatgctcacccaact 367 ||||||| |||||||||||||||||||||||||||| Sbjct: 22420074 tctgcatctacccatgcaatttcatgctcacccaact 22420110
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1003_C09 Length = 124746 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 331 tctgcataaacccatgcaatttcatgctcacccaact 367 ||||||| |||||||||||||||||||||||||||| Sbjct: 56563 tctgcatctacccatgcaatttcatgctcacccaact 56599
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 561 gacagatggttgtaagatgggtccctggaaatgcaaagtaacatgaagcactta 614 ||||||| ||||| |||| | |||||| ||||| | |||||||||||||||||| Sbjct: 25733828 gacagattgttgtgagatagatccctgaaaatggacagtaacatgaagcactta 25733775
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 561 gacagatggttgtaagatgggtccctggaaatgcaaagtaacatgaagcactta 614 ||||||| ||||| |||| | |||||| ||||| | |||||||||||||||||| Sbjct: 6039 gacagattgttgtgagatagatccctgaaaatggacagtaacatgaagcactta 5986
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 561 gacagatggttgtaagatgggtccctggaaatgcaaagtaacatgaagcactta 614 ||||||| ||||| |||| | |||||| ||||| | |||||||||||||||||| Sbjct: 111576 gacagattgttgtgagatagatccctgaaaatggacagtaacatgaagcactta 111523
>gb|DQ025732.1| Oncorhynchus nerka clone One.F10.75.35 genomic sequence Length = 627 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 542 agagccaggtgttgtttctgac 563 |||||||||||||||||||||| Sbjct: 162 agagccaggtgttgtttctgac 141
>gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, complete sequence Length = 189105 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 632 atgacataaaaaattctattg 652 ||||||||||||||||||||| Sbjct: 25846 atgacataaaaaattctattg 25826
>gb|AC100737.18| Mus musculus chromosome 7, clone RP24-360I22, complete sequence Length = 148090 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 632 atgacataaaaaattctattg 652 ||||||||||||||||||||| Sbjct: 127783 atgacataaaaaattctattg 127763
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 aattacaaaattatcaaatct 185 ||||||||||||||||||||| Sbjct: 77430 aattacaaaattatcaaatct 77450
>emb|AL607083.17| Mouse DNA sequence from clone RP23-206E3 on chromosome 11 Contains a novel gene, complete sequence Length = 189495 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 573 taagatgggtccctggaaatg 593 ||||||||||||||||||||| Sbjct: 16775 taagatgggtccctggaaatg 16755
>gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR30J04, complete sequence Length = 177277 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gatatctatgatttaagggga 465 ||||||||||||||||||||| Sbjct: 88880 gatatctatgatttaagggga 88860
>gb|AC079279.4|AC079279 Arabidopsis thaliana chromosome 1 BAC F17J6 genomic sequence, complete sequence Length = 92745 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 aattacaaaattatcaaatct 185 ||||||||||||||||||||| Sbjct: 92660 aattacaaaattatcaaatct 92680
>gb|AC079027.1|AC079027 Arabidopsis thaliana chromosome 1 BAC F4M15 genomic sequence, complete sequence Length = 29054 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 aattacaaaattatcaaatct 185 ||||||||||||||||||||| Sbjct: 23999 aattacaaaattatcaaatct 23979
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete sequence Length = 302538 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 gatatctatgatttaagggga 465 ||||||||||||||||||||| Sbjct: 54177 gatatctatgatttaagggga 54157
>emb|AL672182.18| Mouse DNA sequence from clone RP23-293I3 on chromosome 11, complete sequence Length = 211363 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 acaaaaatgtaagtcatggga 533 ||||||||||||||||||||| Sbjct: 51215 acaaaaatgtaagtcatggga 51195
>gb|AC165077.3| Mus musculus BAC clone RP24-369J8 from chromosome 7, complete sequence Length = 179228 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 632 atgacataaaaaattctattg 652 ||||||||||||||||||||| Sbjct: 136752 atgacataaaaaattctattg 136732
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 gaaatgcaaagtaacatgaa 607 |||||||||||||||||||| Sbjct: 79357 gaaatgcaaagtaacatgaa 79338
>gb|AC161597.7| Mus musculus BAC clone RP23-387P23 from chromosome 6, complete sequence Length = 218586 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 tatagatagatgcataagta 632 |||||||||||||||||||| Sbjct: 124201 tatagatagatgcataagta 124182
>ref|XM_518987.1| PREDICTED: Pan troglodytes integrin, beta 8 (LOC463282), mRNA Length = 3279 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 attaatttctctgaaagttg 138 |||||||||||||||||||| Sbjct: 470 attaatttctctgaaagttg 451
>gb|AC102661.7| Mus musculus chromosome 3, clone RP23-114K16, complete sequence Length = 176493 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ttctcatccacccttccagcttct 333 |||||||| ||||||||||||||| Sbjct: 22508 ttctcatctacccttccagcttct 22485
>gb|AC114572.13| Mus musculus chromosome 14, clone RP23-143M7, complete sequence Length = 188776 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aacataatttacaccaataa 43 |||||||||||||||||||| Sbjct: 31696 aacataatttacaccaataa 31715
>ref|XM_360676.1| Magnaporthe grisea 70-15 hypothetical protein (MG03219.4) partial mRNA Length = 1185 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 aatttctctgaaagttgtaa 141 |||||||||||||||||||| Sbjct: 582 aatttctctgaaagttgtaa 563
>gb|AC134839.3| Mus musculus BAC clone RP24-362O23 from chromosome 19, complete sequence Length = 178560 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 610 acttatagatagatgcataagtat 633 ||||||||| |||||||||||||| Sbjct: 165310 acttatagagagatgcataagtat 165333
>gb|AC165242.6| Mus musculus chromosome 3, clone RP24-98F15, complete sequence Length = 185876 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 ttctcatccacccttccagcttct 333 |||||||| ||||||||||||||| Sbjct: 32011 ttctcatctacccttccagcttct 32034
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cacataaattacaaaattat 178 |||||||||||||||||||| Sbjct: 14684344 cacataaattacaaaattat 14684363
>gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, complete sequence Length = 154218 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 actaagagccaggtgttgtt 557 |||||||||||||||||||| Sbjct: 143129 actaagagccaggtgttgtt 143148
>gb|AC122478.3| Mus musculus BAC clone RP24-337D11 from chromosome 6, complete sequence Length = 135772 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 tatagatagatgcataagta 632 |||||||||||||||||||| Sbjct: 114216 tatagatagatgcataagta 114197
>gb|AC131942.1| Mus musculus BAC clone RP24-478A20 from 3, complete sequence Length = 209411 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cccttgttttgggatacctt 99 |||||||||||||||||||| Sbjct: 123245 cccttgttttgggatacctt 123226
>gb|BC002630.2| Homo sapiens integrin, beta 8, mRNA (cDNA clone MGC:3946 IMAGE:3609490), complete cds Length = 2068 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 attaatttctctgaaagttg 138 |||||||||||||||||||| Sbjct: 1703 attaatttctctgaaagttg 1684
>gb|AC004130.1| Homo sapiens BAC clone CTA-293F17 from 7, complete sequence Length = 116215 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 attaatttctctgaaagttg 138 |||||||||||||||||||| Sbjct: 75155 attaatttctctgaaagttg 75136
>ref|XM_726177.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03275) partial mRNA Length = 2211 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cacataaattacaaaattatcaaa 182 ||||||||||||| |||||||||| Sbjct: 119 cacataaattacacaattatcaaa 142
>ref|NM_002214.2| Homo sapiens integrin, beta 8 (ITGB8), mRNA Length = 8787 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 attaatttctctgaaagttg 138 |||||||||||||||||||| Sbjct: 1703 attaatttctctgaaagttg 1684
>emb|AL451075.15| Human DNA sequence from clone RP11-215I23 on chromosome 1 Contains the 3' end of the SOAT1 gene for sterol O-acyltransferase (acyl-Coenzyme A: cholesterol acyltransferase) 1, the 5' end of a novel gene, a MADS box transcription enhancer factor 2 polypeptide A (myocyte enhancer factor 2A) (MEF2A) pseudogene and a heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene, complete sequence Length = 153937 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 acatgcatgtaactaaataa 233 |||||||||||||||||||| Sbjct: 7450 acatgcatgtaactaaataa 7431
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ataacatcacataaattaca 171 |||||||||||||||||||| Sbjct: 809681 ataacatcacataaattaca 809662
>gb|BT007680.1| Synthetic construct Homo sapiens integrin, beta 8 mRNA, partial cds Length = 1320 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 attaatttctctgaaagttg 138 |||||||||||||||||||| Sbjct: 998 attaatttctctgaaagttg 979
>gb|BT006739.1| Homo sapiens integrin, beta 8 mRNA, complete cds Length = 1320 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 attaatttctctgaaagttg 138 |||||||||||||||||||| Sbjct: 998 attaatttctctgaaagttg 979
>gb|AY699705.1| Streptococcus thermophilus bacteriophage 2972, complete genome Length = 34704 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 agttgtaactgaaatttcat 153 |||||||||||||||||||| Sbjct: 3689 agttgtaactgaaatttcat 3670
>gb|AC007551.1| Homo sapiens clone RP11-239C9 from 7p14-15, complete sequence Length = 155401 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 cataacatcacataaattacaaaa 174 |||||||| ||||||||||||||| Sbjct: 139229 cataacataacataaattacaaaa 139206
>dbj|AK090521.1| Homo sapiens cDNA FLJ33202 fis, clone ADRGL2006886, highly similar to Homo sapiens apamin-sensitive small-conductance Ca2+-activated potassium channel (KCNN2) mRNA Length = 2162 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 taaattacaaaattatcaaa 182 |||||||||||||||||||| Sbjct: 1030 taaattacaaaattatcaaa 1049
>gb|AC109482.3| Homo sapiens chromosome 5 clone RP11-492A10, complete sequence Length = 101941 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 taaattacaaaattatcaaa 182 |||||||||||||||||||| Sbjct: 84101 taaattacaaaattatcaaa 84120
>gb|AC093817.3| Homo sapiens BAC clone RP11-364P22 from 4, complete sequence Length = 183186 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 taaattacaaaattatcaaa 182 |||||||||||||||||||| Sbjct: 142281 taaattacaaaattatcaaa 142300
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cacataaattacaaaattat 178 |||||||||||||||||||| Sbjct: 23256 cacataaattacaaaattat 23275
>emb|BX000477.13| Zebrafish DNA sequence from clone CH211-59D8 in linkage group 10, complete sequence Length = 176689 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ataatttacaccaataatta 46 |||||||||||||||||||| Sbjct: 47216 ataatttacaccaataatta 47197
>gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L3, complete sequence Length = 150856 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 cataacatcacataaattacaaaa 174 |||||||| ||||||||||||||| Sbjct: 3866 cataacataacataaattacaaaa 3843
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cacataaattacaaaattat 178 |||||||||||||||||||| Sbjct: 14679278 cacataaattacaaaattat 14679297
>gb|AC026318.23| Homo sapiens 3 BAC RP11-59D2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 83181 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 aacaccaacaaaaatgtaagtcat 529 |||| ||||||||||||||||||| Sbjct: 82921 aacaacaacaaaaatgtaagtcat 82898
>gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete sequence Length = 182627 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 acccttccagcttctgcata 338 |||||||||||||||||||| Sbjct: 180184 acccttccagcttctgcata 180203
>gb|AC009477.4| Homo sapiens BAC clone RP11-209H16 from 2, complete sequence Length = 173071 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 actgaaatttcataacatca 160 |||||||||||||||||||| Sbjct: 86941 actgaaatttcataacatca 86922
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ataaattacaaaattatcaa 181 |||||||||||||||||||| Sbjct: 504978 ataaattacaaaattatcaa 504997
>emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in linkage group 19, complete sequence Length = 200523 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 taaattacaaaattatcaaa 182 |||||||||||||||||||| Sbjct: 140119 taaattacaaaattatcaaa 140100
>emb|BX537115.11| Zebrafish DNA sequence from clone CH211-207B20 in linkage group 14, complete sequence Length = 192331 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 taacataatttacaccaataatta 46 ||||||||||||| |||||||||| Sbjct: 64222 taacataatttactccaataatta 64245 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 taacataatttacaccaataatta 46 ||||||||||||| |||||||||| Sbjct: 49609 taacataatttactccaataatta 49586
>gb|AC157891.3| Medicago truncatula chromosome 7 BAC clone mte1-1i2, complete sequence Length = 154095 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 taaattacaaaattatcaaa 182 |||||||||||||||||||| Sbjct: 92315 taaattacaaaattatcaaa 92296
>dbj|AB006699.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDJ22 Length = 77363 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 actaaataacactcacatac 244 |||||||||||||||||||| Sbjct: 61174 actaaataacactcacatac 61193
>gb|U88974.1| Streptococcus thermophilus temperate bacteriophage O1205, complete genome Length = 43075 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 agttgtaactgaaatttcat 153 |||||||||||||||||||| Sbjct: 16249 agttgtaactgaaatttcat 16230
>emb|CT010520.15| Mouse DNA sequence from clone RP23-349A19 on chromosome 14, complete sequence Length = 175582 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aacataatttacaccaataa 43 |||||||||||||||||||| Sbjct: 84701 aacataatttacaccaataa 84720
>gb|AC148321.7| Mus musculus BAC clone RP24-512H17 from 19, complete sequence Length = 210790 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 610 acttatagatagatgcataagtat 633 ||||||||| |||||||||||||| Sbjct: 13631 acttatagagagatgcataagtat 13654
>emb|AL928792.9| Mouse DNA sequence from clone RP23-88O15 on chromosome 2, complete sequence Length = 257463 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 502 gaagaacaccaacaaaaatgtaag 525 ||||||||||| |||||||||||| Sbjct: 43888 gaagaacaccagcaaaaatgtaag 43911
>emb|AL591125.20| Mouse DNA sequence from clone RP23-438D7 on chromosome 11, complete sequence Length = 160284 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ctcccttgttttgggatacc 97 |||||||||||||||||||| Sbjct: 41553 ctcccttgttttgggatacc 41572
>gb|M73780.1|HUMIB8SUA Human integrin beta-8 subunit mRNA, complete cds Length = 3789 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 attaatttctctgaaagttg 138 |||||||||||||||||||| Sbjct: 1678 attaatttctctgaaagttg 1659
>gb|M73781.1|RABIB8SUA Oryctolagus cuniculus integrin beta-8 subunit mRNA, complete cds Length = 2972 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 attaatttctctgaaagttg 138 |||||||||||||||||||| Sbjct: 1649 attaatttctctgaaagttg 1630
>gb|AC130472.2| Homo sapiens chromosome 3 clone RP11-395P16, complete sequence Length = 194160 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 aacaccaacaaaaatgtaagtcat 529 |||| ||||||||||||||||||| Sbjct: 192416 aacaacaacaaaaatgtaagtcat 192439 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,737,003 Number of Sequences: 3902068 Number of extensions: 7737003 Number of successful extensions: 167028 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 166693 Number of HSP's gapped (non-prelim): 335 length of query: 698 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 675 effective length of database: 17,143,297,704 effective search space: 11571725950200 effective search space used: 11571725950200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
