ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbah63p22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463361.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1656 Score = 420 bits (212), Expect = e-114 Identities = 341/384 (88%) Strand = Plus / Minus Query: 172 tcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccct 231 |||||| || ||||| ||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 1656 tcagaagaaggtggttccggcgaagccgcggtggaggaggttgtgggcgatgttgtccct 1597 Query: 232 ttcctgcttggcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaag 291 | ||||||||| ||| ||||| || ||||||||||||| ||| |||||||||| || Sbjct: 1596 ggcgcgcttggcggcctcggagcggacgggggtctccggcgaggtctcgtcgtcgacgag 1537 Query: 292 agcaaactggacctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggac 351 | ||| ||| |||||||||||||||||||| |||| |||||||||| ||||| ||||| Sbjct: 1536 ctcgaaccggagctccggctcgagctcctcgccgcgcgtctcgcagatgttgtggaggac 1477 Query: 352 gcagcaggcgccgagcaccacggggaggtcctggagcttcacctccgtgcgcttctggag 411 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1476 gcagcaggcgccgagcacgacggggaggtcctggagcttcacctccgtccgcttctggag 1417 Query: 412 gcacgcccaccgtgtcttgagccgcgcgaacgcctccacggccacgttgcggatgtcgcc 471 |||||||||||| | |||||| || |||||||| || ||||| ||| ||||| |||||| Sbjct: 1416 gcacgcccaccgcgccttgaggcgggcgaacgcgtcgacggcgacgcggcggaggtcgcc 1357 Query: 472 gaccttctcgttgaaggcgtgctgcgtccatgtcaggttctggtgtgtgtagggcacgag 531 ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1356 caccttctcgttgaaggcgtgctgcgtccacgtcaggttctggtgcgtgtaggggacgag 1297 Query: 532 cacccaatccatgagcgggtagct 555 |||||| ||||||||||||||||| Sbjct: 1296 cacccagtccatgagcgggtagct 1273
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 420 bits (212), Expect = e-114 Identities = 341/384 (88%) Strand = Plus / Minus Query: 172 tcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccct 231 |||||| || ||||| ||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 22602478 tcagaagaaggtggttccggcgaagccgcggtggaggaggttgtgggcgatgttgtccct 22602419 Query: 232 ttcctgcttggcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaag 291 | ||||||||| ||| ||||| || ||||||||||||| ||| |||||||||| || Sbjct: 22602418 ggcgcgcttggcggcctcggagcggacgggggtctccggcgaggtctcgtcgtcgacgag 22602359 Query: 292 agcaaactggacctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggac 351 | ||| ||| |||||||||||||||||||| |||| |||||||||| ||||| ||||| Sbjct: 22602358 ctcgaaccggagctccggctcgagctcctcgccgcgcgtctcgcagatgttgtggaggac 22602299 Query: 352 gcagcaggcgccgagcaccacggggaggtcctggagcttcacctccgtgcgcttctggag 411 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 22602298 gcagcaggcgccgagcacgacggggaggtcctggagcttcacctccgtccgcttctggag 22602239 Query: 412 gcacgcccaccgtgtcttgagccgcgcgaacgcctccacggccacgttgcggatgtcgcc 471 |||||||||||| | |||||| || |||||||| || ||||| ||| ||||| |||||| Sbjct: 22602238 gcacgcccaccgcgccttgaggcgggcgaacgcgtcgacggcgacgcggcggaggtcgcc 22602179 Query: 472 gaccttctcgttgaaggcgtgctgcgtccatgtcaggttctggtgtgtgtagggcacgag 531 ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 22602178 caccttctcgttgaaggcgtgctgcgtccacgtcaggttctggtgcgtgtaggggacgag 22602119 Query: 532 cacccaatccatgagcgggtagct 555 |||||| ||||||||||||||||| Sbjct: 22602118 cacccagtccatgagcgggtagct 22602095 Score = 153 bits (77), Expect = 7e-34 Identities = 188/225 (83%) Strand = Plus / Minus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagctt 390 ||||||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| Sbjct: 4646740 ctcgcagatgttgtggaggacgcagcaggcgccgagcacggtggggaggtcgagcagctt 4646681 Query: 391 cacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctccac 450 |||||| ||||||||||||||||| ||||||| |||||| ||| ||||||| || Sbjct: 4646680 cacctcggtgcgcttctggaggcagccccaccggcgcttgaggcgctcgaacgcgtcgcg 4646621 Query: 451 ggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggtt 510 |||||| ||| | | || ||||||||||||||| |||||||| ||| |||||||| Sbjct: 4646620 cgccacgccgcgcacggcggcgaccttctcgttgagcatgtgctgcgcccacgtcaggtt 4646561 Query: 511 ctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 |||||| |||||||||||||||| ||| |||||||||||| |||| Sbjct: 4646560 ctggtgggtgtagggcacgagcatccagtccatgagcgggaagct 4646516 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 196 gccgcggtggaggaggttgtgggcgatg 223 ||||| |||||||||||||||||||||| Sbjct: 4646881 gccgctgtggaggaggttgtgggcgatg 4646854 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 acctccggctcgagctcctcgcggcgca 329 ||||||||||| ||||||| |||||||| Sbjct: 3228708 acctccggctctagctcctggcggcgca 3228735
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 420 bits (212), Expect = e-114 Identities = 341/384 (88%) Strand = Plus / Minus Query: 172 tcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccct 231 |||||| || ||||| ||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 118215 tcagaagaaggtggttccggcgaagccgcggtggaggaggttgtgggcgatgttgtccct 118156 Query: 232 ttcctgcttggcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaag 291 | ||||||||| ||| ||||| || ||||||||||||| ||| |||||||||| || Sbjct: 118155 ggcgcgcttggcggcctcggagcggacgggggtctccggcgaggtctcgtcgtcgacgag 118096 Query: 292 agcaaactggacctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggac 351 | ||| ||| |||||||||||||||||||| |||| |||||||||| ||||| ||||| Sbjct: 118095 ctcgaaccggagctccggctcgagctcctcgccgcgcgtctcgcagatgttgtggaggac 118036 Query: 352 gcagcaggcgccgagcaccacggggaggtcctggagcttcacctccgtgcgcttctggag 411 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 118035 gcagcaggcgccgagcacgacggggaggtcctggagcttcacctccgtccgcttctggag 117976 Query: 412 gcacgcccaccgtgtcttgagccgcgcgaacgcctccacggccacgttgcggatgtcgcc 471 |||||||||||| | |||||| || |||||||| || ||||| ||| ||||| |||||| Sbjct: 117975 gcacgcccaccgcgccttgaggcgggcgaacgcgtcgacggcgacgcggcggaggtcgcc 117916 Query: 472 gaccttctcgttgaaggcgtgctgcgtccatgtcaggttctggtgtgtgtagggcacgag 531 ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 117915 caccttctcgttgaaggcgtgctgcgtccacgtcaggttctggtgcgtgtaggggacgag 117856 Query: 532 cacccaatccatgagcgggtagct 555 |||||| ||||||||||||||||| Sbjct: 117855 cacccagtccatgagcgggtagct 117832
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 268/310 (86%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 182 gtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccctttcctgcttg 241 ||||| ||||| |||||||||||||||||||||||||||||| ||||||| | ||||| Sbjct: 27767544 gtggttccggcgaagccgcggtggaggaggttgtgggcgatgttgtccctgttgcgcttg 27767603 Query: 242 gcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaagagcaaactgg 301 |||| ||| ||||| || |||||||||||| ||| ||||||| || || | || || Sbjct: 27767604 gcggcctcggagcggacgggggtctccggcaaggtctcgtcgttgacgagctcgtaccgg 27767663 Query: 302 acctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggacgcagcaggcg 361 | || ||||||||||||||||| |||| |||||||||| ||||| ||||||||||||| | Sbjct: 27767664 agctacggctcgagctcctcgccgcgcgtctcgcagatgttgtggaggacgcagcaggtg 27767723 Query: 362 ccgagcaccacggggaggtcctggagcttcacctccgtgcgcttctggaggcacgcccac 421 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27767724 ccgagcacgacggggaggtcctggagcttcacctccgtgcgcttctggaggcacgcccac 27767783 Query: 422 cgtgtcttgagccgcgcgaacgcctccacggccacgttgcggatgtcgccgaccttctcg 481 || | |||||| ||||||||||| || ||||| ||| |||| |||||| ||| ||||| Sbjct: 27767784 cgcgccttgag-cgcgcgaacgcgtcgacggcgacgcgccggaggtcgcccaccctctcg 27767842 Query: 482 ttgaaggcgt 491 |||||||||| Sbjct: 27767843 ttgaaggcgt 27767852 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 ttctatactagcggctaaaagaatt 113 |||||| |||||||||||||||||| Sbjct: 27767440 ttctattctagcggctaaaagaatt 27767464
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 274 bits (138), Expect = 3e-70 Identities = 268/310 (86%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 182 gtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccctttcctgcttg 241 ||||| ||||| |||||||||||||||||||||||||||||| ||||||| | ||||| Sbjct: 52877 gtggttccggcgaagccgcggtggaggaggttgtgggcgatgttgtccctgttgcgcttg 52936 Query: 242 gcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaagagcaaactgg 301 |||| ||| ||||| || |||||||||||| ||| ||||||| || || | || || Sbjct: 52937 gcggcctcggagcggacgggggtctccggcaaggtctcgtcgttgacgagctcgtaccgg 52996 Query: 302 acctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggacgcagcaggcg 361 | || ||||||||||||||||| |||| |||||||||| ||||| ||||||||||||| | Sbjct: 52997 agctacggctcgagctcctcgccgcgcgtctcgcagatgttgtggaggacgcagcaggtg 53056 Query: 362 ccgagcaccacggggaggtcctggagcttcacctccgtgcgcttctggaggcacgcccac 421 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53057 ccgagcacgacggggaggtcctggagcttcacctccgtgcgcttctggaggcacgcccac 53116 Query: 422 cgtgtcttgagccgcgcgaacgcctccacggccacgttgcggatgtcgccgaccttctcg 481 || | |||||| ||||||||||| || ||||| ||| |||| |||||| ||| ||||| Sbjct: 53117 cgcgccttgag-cgcgcgaacgcgtcgacggcgacgcgccggaggtcgcccaccctctcg 53175 Query: 482 ttgaaggcgt 491 |||||||||| Sbjct: 53176 ttgaaggcgt 53185 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 ttctatactagcggctaaaagaatt 113 |||||| |||||||||||||||||| Sbjct: 52773 ttctattctagcggctaaaagaatt 52797
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 258 bits (130), Expect = 2e-65 Identities = 265/310 (85%) Strand = Plus / Minus Query: 182 gtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccctttcctgcttg 241 ||||| ||||| |||||||||||||||||||||||||||||| ||||||| | ||||| Sbjct: 14992508 gtggttccggcgaagccgcggtggaggaggttgtgggcgatgttgtccctattgcgcttg 14992449 Query: 242 gcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaagagcaaactgg 301 |||| ||| ||||| || ||||||||| || ||| | |||||||| || | || || Sbjct: 14992448 gcggcctcggagcggacgggggtctcctgcaaggtcttgtcgtcgacgagctcgtaccgg 14992389 Query: 302 acctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggacgcagcaggcg 361 | || |||||||||||||||| |||| |||||||||| ||||| ||||||||||||| | Sbjct: 14992388 agctacggctcgagctcctcgtcgcgcgtctcgcagatgttgtggaggacgcagcaggtg 14992329 Query: 362 ccgagcaccacggggaggtcctggagcttcacctccgtgcgcttctggaggcacgcccac 421 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14992328 ccgagcacgacggggaggtcctggagcttcacctccgtgcgcttctggaggcacgcccac 14992269 Query: 422 cgtgtcttgagccgcgcgaacgcctccacggccacgttgcggatgtcgccgaccttctcg 481 || | |||||| | ||||||||| || ||||| ||| |||| |||||| ||| ||||| Sbjct: 14992268 cgcgccttgagtcacgcgaacgcgtcgacggcgacgcgccggaggtcgcccaccctctcg 14992209 Query: 482 ttgaaggcgt 491 |||||||||| Sbjct: 14992208 ttgaaggcgt 14992199 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 ttctatactagcggctaaaagaatt 113 |||||| |||||||||||||||||| Sbjct: 14992612 ttctattctagcggctaaaagaatt 14992588
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 258 bits (130), Expect = 2e-65 Identities = 265/310 (85%) Strand = Plus / Minus Query: 182 gtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccctttcctgcttg 241 ||||| ||||| |||||||||||||||||||||||||||||| ||||||| | ||||| Sbjct: 61954 gtggttccggcgaagccgcggtggaggaggttgtgggcgatgttgtccctattgcgcttg 61895 Query: 242 gcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaagagcaaactgg 301 |||| ||| ||||| || ||||||||| || ||| | |||||||| || | || || Sbjct: 61894 gcggcctcggagcggacgggggtctcctgcaaggtcttgtcgtcgacgagctcgtaccgg 61835 Query: 302 acctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggacgcagcaggcg 361 | || |||||||||||||||| |||| |||||||||| ||||| ||||||||||||| | Sbjct: 61834 agctacggctcgagctcctcgtcgcgcgtctcgcagatgttgtggaggacgcagcaggtg 61775 Query: 362 ccgagcaccacggggaggtcctggagcttcacctccgtgcgcttctggaggcacgcccac 421 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61774 ccgagcacgacggggaggtcctggagcttcacctccgtgcgcttctggaggcacgcccac 61715 Query: 422 cgtgtcttgagccgcgcgaacgcctccacggccacgttgcggatgtcgccgaccttctcg 481 || | |||||| | ||||||||| || ||||| ||| |||| |||||| ||| ||||| Sbjct: 61714 cgcgccttgagtcacgcgaacgcgtcgacggcgacgcgccggaggtcgcccaccctctcg 61655 Query: 482 ttgaaggcgt 491 |||||||||| Sbjct: 61654 ttgaaggcgt 61645 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 ttctatactagcggctaaaagaatt 113 |||||| |||||||||||||||||| Sbjct: 62058 ttctattctagcggctaaaagaatt 62034
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 226 bits (114), Expect = 6e-56 Identities = 252/298 (84%) Strand = Plus / Minus Query: 194 aagccgcggtggaggaggttgtgggcgatgctgtccctttcctgcttggcggtctcagag 253 |||||||||||||||||||| ||||||||| ||||||| || ||||| ||| ||||||| Sbjct: 2857076 aagccgcggtggaggaggttttgggcgatgttgtccctgtcgcgcttgacggcctcagag 2857017 Query: 254 cgaacaggggtctccggcgtggtatcgtcgtcgaaaagagcaaactggacctccggctcg 313 | || |||||||||||| ||| ||||| |||| || || | |||| | |||||||| Sbjct: 2857016 ccgacgtgggtctccggcgaggtctcgtcatcgatgagctcatattggagcaccggctcg 2856957 Query: 314 agctcctcgcggcgcatctcgcagatattgtgcaggacgcagcaggcgccgagcaccacg 373 |||||||||| ||| |||||||||| ||||| | |||||| |||| ||| ||||| ||| Sbjct: 2856956 agctcctcgccgcgtgtctcgcagatgttgtggacgacgcatcaggtgccaagcacgacg 2856897 Query: 374 gggaggtcctggagcttcacctccgtgcgcttctggaggcacgcccaccgtgtcttgagc 433 |||||||| |||||||||||||||||||| |||||||||||||||||||| | ||| ||| Sbjct: 2856896 gggaggtcttggagcttcacctccgtgcgattctggaggcacgcccaccgcgccttaagc 2856837 Query: 434 cgcgcgaacgcctccacggccacgttgcggatgtcgccgaccttctcgttgaaggcgt 491 ||||||||||| || ||||| |||| |||| |||||| ||| ||| ||||||||||| Sbjct: 2856836 cgcgcgaacgcgtctacggcgacgtgccggaggtcgcccaccctcttgttgaaggcgt 2856779 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 ttctatactagcggctaaaagaat 112 |||||| ||||||||||||||||| Sbjct: 2857193 ttctattctagcggctaaaagaat 2857170
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 220 bits (111), Expect = 4e-54 Identities = 207/239 (86%) Strand = Plus / Minus Query: 172 tcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccct 231 |||||| || ||||| ||||| ||||||||||||||||||||||||| |||| ||||||| Sbjct: 7968974 tcagaagaaggtggttccggccaagccgcggtggaggaggttgtgggtgatgttgtccct 7968915 Query: 232 ttcctgcttggcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaag 291 || ||||||||| ||| ||||| || ||||||||||| | ||| | ||||||| || Sbjct: 7968914 gtcgcgcttggcggcctcggagcggacgggggtctccggtgaggtctattcgtcgacgag 7968855 Query: 292 agcaaactggacctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggac 351 | || | | |||||||||||||||||||| |||| |||||||||| ||||| ||||| Sbjct: 7968854 ctcgtaccgaagctccggctcgagctcctcgccgcgcgtctcgcagatgttgtggaggac 7968795 Query: 352 gcagcaggcgccgagcaccacggggaggtcctggagcttcacctccgtgcgcttctgga 410 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 7968794 gcagcaggcgccgagcacgacggggaggtcctggagcttcacctccgtgcgcttctgga 7968736 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 402 gcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctccacggc 453 |||||||||||||||||||||| | |||||||| ||||||||| || ||||| Sbjct: 7968557 gcttctggaggcacgcccaccgcgccttgagccacgcgaacgcgtcgacggc 7968506
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 220 bits (111), Expect = 4e-54 Identities = 207/239 (86%) Strand = Plus / Minus Query: 172 tcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccct 231 |||||| || ||||| ||||| ||||||||||||||||||||||||| |||| ||||||| Sbjct: 76492 tcagaagaaggtggttccggccaagccgcggtggaggaggttgtgggtgatgttgtccct 76433 Query: 232 ttcctgcttggcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaag 291 || ||||||||| ||| ||||| || ||||||||||| | ||| | ||||||| || Sbjct: 76432 gtcgcgcttggcggcctcggagcggacgggggtctccggtgaggtctattcgtcgacgag 76373 Query: 292 agcaaactggacctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggac 351 | || | | |||||||||||||||||||| |||| |||||||||| ||||| ||||| Sbjct: 76372 ctcgtaccgaagctccggctcgagctcctcgccgcgcgtctcgcagatgttgtggaggac 76313 Query: 352 gcagcaggcgccgagcaccacggggaggtcctggagcttcacctccgtgcgcttctgga 410 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 76312 gcagcaggcgccgagcacgacggggaggtcctggagcttcacctccgtgcgcttctgga 76254 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 402 gcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctccacggc 453 |||||||||||||||||||||| | |||||||| ||||||||| || ||||| Sbjct: 76075 gcttctggaggcacgcccaccgcgccttgagccacgcgaacgcgtcgacggc 76024
>ref|XM_476023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1272 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Minus Query: 330 tctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagct 389 |||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||| |||| Sbjct: 1111 tctcgcagatgttgtggaggacgcagcaggcggcgagcaccgcggggaggtcctgcagct 1052 Query: 390 tcacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctcca 449 ||||||||||||||||||| |||||||||||||| |||||| || ||||||||||| Sbjct: 1051 tcacctccgtgcgcttctgcaggcacgcccaccgccccttgaggcggacgaacgcctccg 992 Query: 450 cggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggt 509 ||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 991 tggccacgcgccggacctcgcccaccttctcgttgaaggcgtgctgcgtccacgtcaggt 932 Query: 510 tctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 | | || | |||||| || |||| ||| ||| | ||||||||||| Sbjct: 931 tgcgctgcgcgtaggggaccagcatccactccgtcagcgggtagct 886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 184 ggtgccggcaaagccgcggtggaggaggttgtgggcgatg 223 ||||||||| || |||||||||||||||||||| |||||| Sbjct: 1260 ggtgccggccaatccgcggtggaggaggttgtgcgcgatg 1221
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 330 tctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagct 389 |||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||| |||| Sbjct: 103785 tctcgcagatgttgtggaggacgcagcaggcggcgagcaccgcggggaggtcctgcagct 103844 Query: 390 tcacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctcca 449 ||||||||||||||||||| |||||||||||||| |||||| || ||||||||||| Sbjct: 103845 tcacctccgtgcgcttctgcaggcacgcccaccgccccttgaggcggacgaacgcctccg 103904 Query: 450 cggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggt 509 ||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 103905 tggccacgcgccggacctcgcccaccttctcgttgaaggcgtgctgcgtccacgtcaggt 103964 Query: 510 tctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 | | || | |||||| || |||| ||| ||| | ||||||||||| Sbjct: 103965 tgcgctgcgcgtaggggaccagcatccactccgtcagcgggtagct 104010 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 169 tgatcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatg 223 ||||||||| || | ||||||||| || |||||||||||||||||||| |||||| Sbjct: 103621 tgatcagaagaaggcggtgccggccaatccgcggtggaggaggttgtgcgcgatg 103675
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Plus Query: 330 tctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagct 389 |||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||| |||| Sbjct: 29325128 tctcgcagatgttgtggaggacgcagcaggcggcgagcaccgcggggaggtcctgcagct 29325187 Query: 390 tcacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctcca 449 ||||||||||||||||||| |||||||||||||| |||||| || ||||||||||| Sbjct: 29325188 tcacctccgtgcgcttctgcaggcacgcccaccgccccttgaggcggacgaacgcctccg 29325247 Query: 450 cggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggt 509 ||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 29325248 tggccacgcgccggacctcgcccaccttctcgttgaaggcgtgctgcgtccacgtcaggt 29325307 Query: 510 tctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 | | || | |||||| || |||| ||| ||| | ||||||||||| Sbjct: 29325308 tgcgctgcgcgtaggggaccagcatccactccgtcagcgggtagct 29325353 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 169 tgatcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatg 223 ||||||||| || | ||||||||| || |||||||||||||||||||| |||||| Sbjct: 29324964 tgatcagaagaaggcggtgccggccaatccgcggtggaggaggttgtgcgcgatg 29325018 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagca 368 |||||||| |||||||| |||||||||||||| |||| Sbjct: 5130781 ctcgcagaggttgtgcagcacgcagcaggcgcccagca 5130818 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagca 368 |||||||| |||||||| |||||||||||||| |||| Sbjct: 5057532 ctcgcagaggttgtgcagcacgcagcaggcgcccagca 5057495
>dbj|AK064253.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-C07, full insert sequence Length = 1538 Score = 194 bits (98), Expect = 2e-46 Identities = 194/226 (85%) Strand = Plus / Minus Query: 330 tctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagct 389 |||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||| |||| Sbjct: 1187 tctcgcagatgttgtggaggacgcagcaggcggcgagcaccgcggggaggtcctgcagct 1128 Query: 390 tcacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctcca 449 ||||||||||||||||||| |||||||||||||| |||||| || ||||||||||| Sbjct: 1127 tcacctccgtgcgcttctgcaggcacgcccaccgccccttgaggcggacgaacgcctccg 1068 Query: 450 cggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggt 509 ||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 1067 tggccacgcgccggacctcgcccaccttctcgttgaaggcgtgctgcgtccacgtcaggt 1008 Query: 510 tctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 | | || | |||||| || |||| ||| ||| | ||||||||||| Sbjct: 1007 tgcgctgcgcgtaggggaccagcatccactccgtcagcgggtagct 962 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 169 tgatcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatg 223 ||||||||| || | ||||||||| || |||||||||||||||||||| |||||| Sbjct: 1351 tgatcagaagaaggcggtgccggccaatccgcggtggaggaggttgtgcgcgatg 1297
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 157 bits (79), Expect = 5e-35 Identities = 193/231 (83%) Strand = Plus / Minus Query: 172 tcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccct 231 |||||| || ||||| ||||| |||||||||| |||||||||||||| |||| |||| || Sbjct: 12699391 tcagaagaacgtggttccggcgaagccgcggtagaggaggttgtgggtgatgttgtcgct 12699332 Query: 232 ttcctgcttggcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaag 291 || |||| ||| | ||| ||||| | ||||||||||||| || ||||| |||| || Sbjct: 12699331 gtcatgctcggcagcctcggagcggaggggggtctccggcgatgtctcgtcatcgacgag 12699272 Query: 292 agcaaactggacctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggac 351 | || ||| ||| |||||||||||||||| || | |||||||||| ||||| ||||| Sbjct: 12699271 ctcgtaccggagctctggctcgagctcctcgccgcacgtctcgcagatgttgtggaggac 12699212 Query: 352 gcagcaggcgccgagcaccacggggaggtcctggagcttcacctccgtgcg 402 |||||||| | ||||||| |||||||||||||||||||||||||||||||| Sbjct: 12699211 gcagcaggaggcgagcacgacggggaggtcctggagcttcacctccgtgcg 12699161
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 157 bits (79), Expect = 5e-35 Identities = 193/231 (83%) Strand = Plus / Minus Query: 172 tcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccct 231 |||||| || ||||| ||||| |||||||||| |||||||||||||| |||| |||| || Sbjct: 12653665 tcagaagaacgtggttccggcgaagccgcggtagaggaggttgtgggtgatgttgtcgct 12653606 Query: 232 ttcctgcttggcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaag 291 || |||| ||| | ||| ||||| | ||||||||||||| || ||||| |||| || Sbjct: 12653605 gtcatgctcggcagcctcggagcggaggggggtctccggcgatgtctcgtcatcgacgag 12653546 Query: 292 agcaaactggacctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggac 351 | || ||| ||| |||||||||||||||| || | |||||||||| ||||| ||||| Sbjct: 12653545 ctcgtaccggagctctggctcgagctcctcgccgcacgtctcgcagatgttgtggaggac 12653486 Query: 352 gcagcaggcgccgagcaccacggggaggtcctggagcttcacctccgtgcg 402 |||||||| | ||||||| |||||||||||||||||||||||||||||||| Sbjct: 12653485 gcagcaggaggcgagcacgacggggaggtcctggagcttcacctccgtgcg 12653435
>emb|AL928777.4|CNS08CC7 Oryza sativa chromosome 12, . BAC OSJNBa0017G24 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150201 Score = 157 bits (79), Expect = 5e-35 Identities = 193/231 (83%) Strand = Plus / Minus Query: 172 tcagaaaaatgtggtgccggcaaagccgcggtggaggaggttgtgggcgatgctgtccct 231 |||||| || ||||| ||||| |||||||||| |||||||||||||| |||| |||| || Sbjct: 29032 tcagaagaacgtggttccggcgaagccgcggtagaggaggttgtgggtgatgttgtcgct 28973 Query: 232 ttcctgcttggcggtctcagagcgaacaggggtctccggcgtggtatcgtcgtcgaaaag 291 || |||| ||| | ||| ||||| | ||||||||||||| || ||||| |||| || Sbjct: 28972 gtcatgctcggcagcctcggagcggaggggggtctccggcgatgtctcgtcatcgacgag 28913 Query: 292 agcaaactggacctccggctcgagctcctcgcggcgcatctcgcagatattgtgcaggac 351 | || ||| ||| |||||||||||||||| || | |||||||||| ||||| ||||| Sbjct: 28912 ctcgtaccggagctctggctcgagctcctcgccgcacgtctcgcagatgttgtggaggac 28853 Query: 352 gcagcaggcgccgagcaccacggggaggtcctggagcttcacctccgtgcg 402 |||||||| | ||||||| |||||||||||||||||||||||||||||||| Sbjct: 28852 gcagcaggaggcgagcacgacggggaggtcctggagcttcacctccgtgcg 28802
>gb|AY109036.1| Zea mays PCO143873 mRNA sequence Length = 1057 Score = 155 bits (78), Expect = 2e-34 Identities = 186/222 (83%) Strand = Plus / Minus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagctt 390 ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 519 ctcgcagatgttgtggaggacgcagcaggcgccgagcacgacggggaggtcctgcagctt 460 Query: 391 cacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctccac 450 |||||| ||||||||||||||||| |||| || | |||||| ||| ||| || ||| Sbjct: 459 cacctcggtgcgcttctggaggcagccccagcgggacttgaggcgctggaaggcgtccct 400 Query: 451 ggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggtt 510 ||||||| ||| | | || | ||| ||||||||| ||||||||| ||| |||| ||| Sbjct: 399 ggccacggcgcgcacgccgtccacccgctcgttgaacacgtgctgcgcccacgtcatgtt 340 Query: 511 ctggtgtgtgtagggcacgagcacccaatccatgagcgggta 552 ||||| ||||||||||| |||| ||| |||||||||||||| Sbjct: 339 gtggtgcgtgtagggcaccagcagccagtccatgagcgggta 298 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 199 gcggtggaggaggttgtgggcgatgctgtc 228 ||||||||||||||||||||||||| |||| Sbjct: 651 gcggtggaggaggttgtgggcgatgttgtc 622
>ref|NM_189629.1| Oryza sativa (japonica cultivar-group), Ozsa8057 predicted mRNA Length = 1716 Score = 153 bits (77), Expect = 7e-34 Identities = 188/225 (83%) Strand = Plus / Minus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagctt 390 ||||||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| Sbjct: 1554 ctcgcagatgttgtggaggacgcagcaggcgccgagcacggtggggaggtcgagcagctt 1495 Query: 391 cacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctccac 450 |||||| ||||||||||||||||| ||||||| |||||| ||| ||||||| || Sbjct: 1494 cacctcggtgcgcttctggaggcagccccaccggcgcttgaggcgctcgaacgcgtcgcg 1435 Query: 451 ggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggtt 510 |||||| ||| | | || ||||||||||||||| |||||||| ||| |||||||| Sbjct: 1434 cgccacgccgcgcacggcggcgaccttctcgttgagcatgtgctgcgcccacgtcaggtt 1375 Query: 511 ctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 |||||| |||||||||||||||| ||| |||||||||||| |||| Sbjct: 1374 ctggtgggtgtagggcacgagcatccagtccatgagcgggaagct 1330 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 196 gccgcggtggaggaggttgtgggcgatg 223 ||||| |||||||||||||||||||||| Sbjct: 1695 gccgctgtggaggaggttgtgggcgatg 1668
>dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512G09 Length = 146921 Score = 153 bits (77), Expect = 7e-34 Identities = 188/225 (83%) Strand = Plus / Minus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagctt 390 ||||||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| Sbjct: 6985 ctcgcagatgttgtggaggacgcagcaggcgccgagcacggtggggaggtcgagcagctt 6926 Query: 391 cacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctccac 450 |||||| ||||||||||||||||| ||||||| |||||| ||| ||||||| || Sbjct: 6925 cacctcggtgcgcttctggaggcagccccaccggcgcttgaggcgctcgaacgcgtcgcg 6866 Query: 451 ggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggtt 510 |||||| ||| | | || ||||||||||||||| |||||||| ||| |||||||| Sbjct: 6865 cgccacgccgcgcacggcggcgaccttctcgttgagcatgtgctgcgcccacgtcaggtt 6806 Query: 511 ctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 |||||| |||||||||||||||| ||| |||||||||||| |||| Sbjct: 6805 ctggtgggtgtagggcacgagcatccagtccatgagcgggaagct 6761 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 196 gccgcggtggaggaggttgtgggcgatg 223 ||||| |||||||||||||||||||||| Sbjct: 7126 gccgctgtggaggaggttgtgggcgatg 7099
>dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695A04 Length = 158133 Score = 153 bits (77), Expect = 7e-34 Identities = 188/225 (83%) Strand = Plus / Minus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagctt 390 ||||||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| Sbjct: 53956 ctcgcagatgttgtggaggacgcagcaggcgccgagcacggtggggaggtcgagcagctt 53897 Query: 391 cacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctccac 450 |||||| ||||||||||||||||| ||||||| |||||| ||| ||||||| || Sbjct: 53896 cacctcggtgcgcttctggaggcagccccaccggcgcttgaggcgctcgaacgcgtcgcg 53837 Query: 451 ggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggtt 510 |||||| ||| | | || ||||||||||||||| |||||||| ||| |||||||| Sbjct: 53836 cgccacgccgcgcacggcggcgaccttctcgttgagcatgtgctgcgcccacgtcaggtt 53777 Query: 511 ctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 |||||| |||||||||||||||| ||| |||||||||||| |||| Sbjct: 53776 ctggtgggtgtagggcacgagcatccagtccatgagcgggaagct 53732 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 196 gccgcggtggaggaggttgtgggcgatg 223 ||||| |||||||||||||||||||||| Sbjct: 54097 gccgctgtggaggaggttgtgggcgatg 54070
>dbj|AK106168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B09, full insert sequence Length = 1205 Score = 153 bits (77), Expect = 7e-34 Identities = 188/225 (83%) Strand = Plus / Minus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagctt 390 ||||||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| Sbjct: 989 ctcgcagatgttgtggaggacgcagcaggcgccgagcacggtggggaggtcgagcagctt 930 Query: 391 cacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctccac 450 |||||| ||||||||||||||||| ||||||| |||||| ||| ||||||| || Sbjct: 929 cacctcggtgcgcttctggaggcagccccaccggcgcttgaggcgctcgaacgcgtcgcg 870 Query: 451 ggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggtt 510 |||||| ||| | | || ||||||||||||||| |||||||| ||| |||||||| Sbjct: 869 cgccacgccgcgcacggcggcgaccttctcgttgagcatgtgctgcgcccacgtcaggtt 810 Query: 511 ctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 |||||| |||||||||||||||| ||| |||||||||||| |||| Sbjct: 809 ctggtgggtgtagggcacgagcatccagtccatgagcgggaagct 765 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 196 gccgcggtggaggaggttgtgggcgatg 223 ||||| |||||||||||||||||||||| Sbjct: 1130 gccgctgtggaggaggttgtgggcgatg 1103
>dbj|AK105323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G12, full insert sequence Length = 1523 Score = 153 bits (77), Expect = 7e-34 Identities = 188/225 (83%) Strand = Plus / Minus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagcaccacggggaggtcctggagctt 390 ||||||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| Sbjct: 1307 ctcgcagatgttgtggaggacgcagcaggcgccgagcacggtggggaggtcgagcagctt 1248 Query: 391 cacctccgtgcgcttctggaggcacgcccaccgtgtcttgagccgcgcgaacgcctccac 450 |||||| ||||||||||||||||| ||||||| |||||| ||| ||||||| || Sbjct: 1247 cacctcggtgcgcttctggaggcagccccaccggcgcttgaggcgctcgaacgcgtcgcg 1188 Query: 451 ggccacgttgcggatgtcgccgaccttctcgttgaaggcgtgctgcgtccatgtcaggtt 510 |||||| ||| | | || ||||||||||||||| |||||||| ||| |||||||| Sbjct: 1187 cgccacgccgcgcacggcggcgaccttctcgttgagcatgtgctgcgcccacgtcaggtt 1128 Query: 511 ctggtgtgtgtagggcacgagcacccaatccatgagcgggtagct 555 |||||| |||||||||||||||| ||| |||||||||||| |||| Sbjct: 1127 ctggtgggtgtagggcacgagcatccagtccatgagcgggaagct 1083 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 196 gccgcggtggaggaggttgtgggcgatg 223 ||||| |||||||||||||||||||||| Sbjct: 1448 gccgctgtggaggaggttgtgggcgatg 1421
>dbj|AK120573.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134I11, full insert sequence Length = 822 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 492 gctgcgtccatgtcaggttctggtgtgtgtagggcacgagcacccaatccatgagcgggt 551 |||||| ||| |||||||||||||| |||||||||||||||| ||| |||||||||||| Sbjct: 492 gctgcgaccacgtcaggttctggtgggtgtagggcacgagcatccagtccatgagcggga 433 Query: 552 agct 555 |||| Sbjct: 432 agct 429
>dbj|AK105331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C05, full insert sequence Length = 1182 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 196 gccgcggtggaggaggttgtgggcgatg 223 ||||| |||||||||||||||||||||| Sbjct: 933 gccgctgtggaggaggttgtgggcgatg 906
>gb|AF542531.2| Cryptococcus neoformans var. neoformans strain JEC21 mating type alpha locus, complete sequence Length = 133474 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 338 atattgtgcaggacgcagcaggc 360 ||||||||||||||||||||||| Sbjct: 38071 atattgtgcaggacgcagcaggc 38049
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 338 atattgtgcaggacgcagcaggc 360 ||||||||||||||||||||||| Sbjct: 1611243 atattgtgcaggacgcagcaggc 1611265
>ref|XM_569175.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB02520) partial mRNA Length = 1378 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 338 atattgtgcaggacgcagcaggc 360 ||||||||||||||||||||||| Sbjct: 1109 atattgtgcaggacgcagcaggc 1087
>ref|XM_570542.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND05890) partial mRNA Length = 1379 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 338 atattgtgcaggacgcagcaggc 360 ||||||||||||||||||||||| Sbjct: 1109 atattgtgcaggacgcagcaggc 1087
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 338 atattgtgcaggacgcagcaggc 360 ||||||||||||||||||||||| Sbjct: 729765 atattgtgcaggacgcagcaggc 729743
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagca 368 |||||||| |||||||| |||||||||||||| |||| Sbjct: 45284 ctcgcagaggttgtgcagcacgcagcaggcgcccagca 45321
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 331 ctcgcagatattgtgcaggacgcagcaggcgccgagca 368 |||||||| |||||||| |||||||||||||| |||| Sbjct: 152117 ctcgcagaggttgtgcagcacgcagcaggcgcccagca 152080
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 452 gccacgttgcggatgtcgccga 473 |||||||||||||||||||||| Sbjct: 1668549 gccacgttgcggatgtcgccga 1668528
>emb|CR637553.2|CNS0EQWN Tetraodon nigroviridis full-length cDNA Length = 1268 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 ggacctccggctcgagctcctc 321 |||||||||||||||||||||| Sbjct: 539 ggacctccggctcgagctcctc 518
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 457 gttgcggatgtcgccgaccttctcgt 482 |||||||||||||| ||||||||||| Sbjct: 344355 gttgcggatgtcgcggaccttctcgt 344330
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 457 gttgcggatgtcgccgaccttctcgt 482 |||||||||||||| ||||||||||| Sbjct: 283352 gttgcggatgtcgcggaccttctcgt 283327
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 457 gttgcggatgtcgccgaccttctcgt 482 |||||||||||||| ||||||||||| Sbjct: 208820 gttgcggatgtcgcggaccttctcgt 208795
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 452 gccacgttgcggatgtcgccga 473 |||||||||||||||||||||| Sbjct: 3003523 gccacgttgcggatgtcgccga 3003502
>ref|NM_119124.2| Arabidopsis thaliana unknown protein AT4G29780 mRNA, complete cds Length = 1997 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 477 tctcgttgaaggcgtgctgcgtccatgtcaggttctg 513 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 1473 tctcgttaaacgcgtgctgcgtccacgtcagattctg 1437
>ref|XM_364957.1| Magnaporthe grisea 70-15 predicted protein (MG09802.4) partial mRNA Length = 2064 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 gtgtcttgagccgcgcgaacg 443 ||||||||||||||||||||| Sbjct: 1075 gtgtcttgagccgcgcgaacg 1055
>emb|CR847570.9| Zebrafish DNA sequence from clone DKEY-29M9 in linkage group 3, complete sequence Length = 124104 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 atgtttaattttatctgtacc 140 ||||||||||||||||||||| Sbjct: 13520 atgtttaattttatctgtacc 13540
>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71 Length = 200001 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 477 tctcgttgaaggcgtgctgcgtccatgtcaggttctg 513 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 115827 tctcgttaaacgcgtgctgcgtccacgtcagattctg 115791
>emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, BAC clone F27B13 (ESSA project) Length = 98401 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 477 tctcgttgaaggcgtgctgcgtccatgtcaggttctg 513 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 5754 tctcgttaaacgcgtgctgcgtccacgtcagattctg 5718
>gb|DQ397545.1| Cenarchaeum symbiosum clone C02B11, complete sequence Length = 45105 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 gccggcaaagccgcggtggag 207 ||||||||||||||||||||| Sbjct: 11846 gccggcaaagccgcggtggag 11826
>dbj|AB169746.1| Macaca fascicularis brain cDNA, clone: QnpA-15006, similar to human NGFI-A binding protein 2 (EGR1 binding protein 2)(NAB2), mRNA, RefSeq: NM_005967.2 Length = 1635 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 343 gtgcaggacgcagcaggcgccgagc 367 |||||| |||||||||||||||||| Sbjct: 91 gtgcagcacgcagcaggcgccgagc 115
>emb|BX821277.1|CNS0A97S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1095 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 477 tctcgttgaaggcgtgctgcgtccatgtcaggttctg 513 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 118 tctcgttaaacgcgtgctgcgtccacgtcagattctg 154
>gb|BT005724.1| Arabidopsis thaliana clone U20102 unknown protein (At4g29780) mRNA, complete cds Length = 1654 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 477 tctcgttgaaggcgtgctgcgtccatgtcaggttctg 513 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 1318 tctcgttaaacgcgtgctgcgtccacgtcagattctg 1282
>gb|AY086407.1| Arabidopsis thaliana clone 249769 mRNA, complete sequence Length = 1809 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 477 tctcgttgaaggcgtgctgcgtccatgtcaggttctg 513 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 1292 tctcgttaaacgcgtgctgcgtccacgtcagattctg 1256
>gb|BT002922.1| Arabidopsis thaliana clone RAFL15-01-N11 (R20102) unknown protein (At4g29780) mRNA, complete cds Length = 2013 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 477 tctcgttgaaggcgtgctgcgtccatgtcaggttctg 513 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 1473 tctcgttaaacgcgtgctgcgtccacgtcagattctg 1437
>dbj|AP006407.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT23O19, TM0297a, complete sequence Length = 61781 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 476 ttctcgttgaaggcgtgctgcgtccatgtcaggttctggtg 516 |||||||| || |||||||||||||| || || |||||||| Sbjct: 30562 ttctcgttaaacgcgtgctgcgtccaggtaagattctggtg 30602
>gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcomycin biosynthetic gene cluster, partial sequence Length = 85915 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ttcacctccgtgcgcttctg 408 |||||||||||||||||||| Sbjct: 2717 ttcacctccgtgcgcttctg 2698
>gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, complete sequence Length = 207889 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggcaggaggtgatttgatca 174 |||||||||||||||||||| Sbjct: 90276 ggcaggaggtgatttgatca 90257
>gb|AC142384.2| Homo sapiens chromosome 16 clone RP11-293B20, complete sequence Length = 182907 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 ggcaggaggtgatttgatca 174 |||||||||||||||||||| Sbjct: 45125 ggcaggaggtgatttgatca 45144
>gb|AC127536.5| Homo sapiens chromosome 15, clone RP11-1181H2, complete sequence Length = 168996 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 ggcaggaggtgatttgatca 174 |||||||||||||||||||| Sbjct: 76401 ggcaggaggtgatttgatca 76420
>emb|CR721190.2|CNS0GJF0 Tetraodon nigroviridis full-length cDNA Length = 619 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 221 ggacgcagcaggcgccgagc 202
>emb|CR719893.2|CNS0GIEZ Tetraodon nigroviridis full-length cDNA Length = 633 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 235 ggacgcagcaggcgccgagc 216
>emb|CR719054.2|CNS0GHRO Tetraodon nigroviridis full-length cDNA Length = 548 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 248 ggacgcagcaggcgccgagc 229
>emb|CR701231.2|CNS0G40R Tetraodon nigroviridis full-length cDNA Length = 526 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 226 ggacgcagcaggcgccgagc 207
>emb|CR694398.2|CNS0FYQY Tetraodon nigroviridis full-length cDNA Length = 526 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 226 ggacgcagcaggcgccgagc 207
>emb|CR681282.2|CNS0FOMM Tetraodon nigroviridis full-length cDNA Length = 526 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 226 ggacgcagcaggcgccgagc 207
>emb|CR679647.2|CNS0FND7 Tetraodon nigroviridis full-length cDNA Length = 622 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 224 ggacgcagcaggcgccgagc 205
>emb|CR679161.2|CNS0FMZP Tetraodon nigroviridis full-length cDNA Length = 527 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 227 ggacgcagcaggcgccgagc 208
>emb|CR678067.2|CNS0FM5L Tetraodon nigroviridis full-length cDNA Length = 507 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 207 ggacgcagcaggcgccgagc 188
>emb|CR676506.2|CNS0FKYE Tetraodon nigroviridis full-length cDNA Length = 576 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 276 ggacgcagcaggcgccgagc 257
>emb|CR675543.2|CNS0FK7X Tetraodon nigroviridis full-length cDNA Length = 717 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 224 ggacgcagcaggcgccgagc 205
>emb|CR672715.2|CNS0FI1D Tetraodon nigroviridis full-length cDNA Length = 619 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 219 ggacgcagcaggcgccgagc 200
>emb|CR667020.2|CNS0FDN6 Tetraodon nigroviridis full-length cDNA Length = 521 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 221 ggacgcagcaggcgccgagc 202
>emb|CR666985.2|CNS0FDM7 Tetraodon nigroviridis full-length cDNA Length = 623 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 225 ggacgcagcaggcgccgagc 206
>emb|CR663333.2|CNS0FASR Tetraodon nigroviridis full-length cDNA Length = 606 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 205 ggacgcagcaggcgccgagc 186
>emb|CR662395.2|CNS0FA2P Tetraodon nigroviridis full-length cDNA Length = 585 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 285 ggacgcagcaggcgccgagc 266
>emb|CR661642.2|CNS0F9HS Tetraodon nigroviridis full-length cDNA Length = 613 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 219 ggacgcagcaggcgccgagc 200
>emb|CR661012.2|CNS0F90A Tetraodon nigroviridis full-length cDNA Length = 712 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 219 ggacgcagcaggcgccgagc 200
>emb|CR653289.2|CNS0F31R Tetraodon nigroviridis full-length cDNA Length = 624 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 226 ggacgcagcaggcgccgagc 207
>emb|CR654550.2|CNS0F40S Tetraodon nigroviridis full-length cDNA Length = 687 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 289 ggacgcagcaggcgccgagc 270
>emb|CR634893.2|CNS0EOUR Tetraodon nigroviridis full-length cDNA Length = 624 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 226 ggacgcagcaggcgccgagc 207
>emb|CR633389.2|CNS0ENOZ Tetraodon nigroviridis full-length cDNA Length = 482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 182 ggacgcagcaggcgccgagc 163
>emb|CR633253.2|CNS0ENL7 Tetraodon nigroviridis full-length cDNA Length = 482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 182 ggacgcagcaggcgccgagc 163
>emb|CR633180.2|CNS0ENJ6 Tetraodon nigroviridis full-length cDNA Length = 482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 182 ggacgcagcaggcgccgagc 163
>emb|CR631297.2|CNS0EM2U Tetraodon nigroviridis full-length cDNA Length = 482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 182 ggacgcagcaggcgccgagc 163
>emb|CR632284.2|CNS0EMUA Tetraodon nigroviridis full-length cDNA Length = 482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 182 ggacgcagcaggcgccgagc 163
>emb|CR631870.2|CNS0EMIS Tetraodon nigroviridis full-length cDNA Length = 482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggacgcagcaggcgccgagc 367 |||||||||||||||||||| Sbjct: 182 ggacgcagcaggcgccgagc 163
>emb|AL138795.21| Human DNA sequence from clone RP4-790G17 on chromosome 1q21.1-21.3 Contains the ANP32E gene for acidic (leucine-rich) nuclear phosphoprotein 32 family, member E, the CA14 gene for carbonic anhydrase XIV, the gene for a likely ortholog of C. elegans anterior pharynx defective 1A (APH-1A), the gene for a novel protein (FLJ23221), a novel gene and the MRPS21 gene for mitochondrial ribosomal protein S21, complete sequence Length = 132823 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gatttgatcagaaaaatgtg 184 |||||||||||||||||||| Sbjct: 54796 gatttgatcagaaaaatgtg 54777
>emb|Z99106.2|BSUB0003 Bacillus subtilis complete genome (section 3 of 21): from 415769 to 611680 Length = 195912 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atgaatttccactttgtctg 56 |||||||||||||||||||| Sbjct: 66163 atgaatttccactttgtctg 66144
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 gtgcaggacgcagcaggcgccgagcaccacgg 374 |||||||||||||| | ||| ||||||||||| Sbjct: 282511 gtgcaggacgcagccgtcgcggagcaccacgg 282480
>emb|BX279525.12| Zebrafish DNA sequence from clone CH211-244C18 in linkage group 12, complete sequence Length = 173914 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 atgtttaattttatctgtac 139 |||||||||||||||||||| Sbjct: 102748 atgtttaattttatctgtac 102729
>gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chromosome 16, complete sequence Length = 158303 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggcaggaggtgatttgatca 174 |||||||||||||||||||| Sbjct: 36442 ggcaggaggtgatttgatca 36423
>gb|AC092342.3| Homo sapiens chromosome 16 clone RP11-264M14, complete sequence Length = 170324 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggcaggaggtgatttgatca 174 |||||||||||||||||||| Sbjct: 86830 ggcaggaggtgatttgatca 86811
>ref|XM_692391.1| PREDICTED: Danio rerio hypothetical protein LOC569030 (LOC569030), mRNA Length = 1393 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ttgtgcaggacgcagcaggc 360 |||||||||||||||||||| Sbjct: 1287 ttgtgcaggacgcagcaggc 1268
>gb|DQ066228.1| Ixodes scapularis isolate ISUFJ-cluster-253 possible transposase mRNA, complete cds Length = 765 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ttgtgcaggacgcagcaggc 360 |||||||||||||||||||| Sbjct: 581 ttgtgcaggacgcagcaggc 562
>gb|AC139476.3| Homo sapiens chromosome 16 clone RP11-341P6, complete sequence Length = 189057 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggcaggaggtgatttgatca 174 |||||||||||||||||||| Sbjct: 185511 ggcaggaggtgatttgatca 185492
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tcgccgaccttctcgttgaa 486 |||||||||||||||||||| Sbjct: 112731 tcgccgaccttctcgttgaa 112750
>gb|AC140890.2| Homo sapiens chromosome 16 clone RP11-188D24, complete sequence Length = 172153 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggcaggaggtgatttgatca 174 |||||||||||||||||||| Sbjct: 41554 ggcaggaggtgatttgatca 41535
>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence Length = 193708 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggcaggaggtgatttgatca 174 |||||||||||||||||||| Sbjct: 7057 ggcaggaggtgatttgatca 7038
>gb|AC136877.2| Homo sapiens chromosome 16 clone RP11-1258I11, complete sequence Length = 180454 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggcaggaggtgatttgatca 174 |||||||||||||||||||| Sbjct: 95043 ggcaggaggtgatttgatca 95024
>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1189A09 Length = 167761 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 acctccggctcgagctcctcgcggcgca 329 ||||||||||| ||||||| |||||||| Sbjct: 46337 acctccggctctagctcctggcggcgca 46364
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tcgccgaccttctcgttgaa 486 |||||||||||||||||||| Sbjct: 112030 tcgccgaccttctcgttgaa 112049
>dbj|AB110645.1| Streptomyces thermoviolaceus bxlR, bxlD, bxlC, bxlB, bxlA genes for LacI/GalR family transcriptional repressor, putative sugar-binding lipoprotein, putative transport proteins, beta-xylosidase, complete cds Length = 9678 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ccacgttgcggatgtcgccg 472 |||||||||||||||||||| Sbjct: 4859 ccacgttgcggatgtcgccg 4840
>tpe|BN000221.1|ECA000221 TPA: TPA_inf: Equus caballus mRNA for putative ISG12(a) protein (isg12(a) gene) Length = 636 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 ggcgccgagcaccacgggga 377 |||||||||||||||||||| Sbjct: 283 ggcgccgagcaccacgggga 264
>emb|CR376854.12| Zebrafish DNA sequence from clone DKEY-197C15 in linkage group 24, complete sequence Length = 201044 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ttgtgcaggacgcagcaggc 360 |||||||||||||||||||| Sbjct: 160799 ttgtgcaggacgcagcaggc 160780
>dbj|AP001360.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831A10, complete sequence Length = 190766 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 atgctgtccctttcctgctt 240 |||||||||||||||||||| Sbjct: 58859 atgctgtccctttcctgctt 58840
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gctcgagctcctcgcggcgc 328 |||||||||||||||||||| Sbjct: 3009433 gctcgagctcctcgcggcgc 3009452
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tgtcgccgaccttctcgttg 484 |||||||||||||||||||| Sbjct: 1176423 tgtcgccgaccttctcgttg 1176404
>emb|AL928726.5| Mouse DNA sequence from clone RP23-397A11 on chromosome 2, complete sequence Length = 120515 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 aatgtttacatgaatttcca 47 |||||||||||||||||||| Sbjct: 58175 aatgtttacatgaatttcca 58156
>dbj|AB001488.1| Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree Length = 148068 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atgaatttccactttgtctg 56 |||||||||||||||||||| Sbjct: 15433 atgaatttccactttgtctg 15414 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,236,594 Number of Sequences: 3902068 Number of extensions: 4236594 Number of successful extensions: 84024 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83261 Number of HSP's gapped (non-prelim): 751 length of query: 556 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 533 effective length of database: 17,143,297,704 effective search space: 9137377676232 effective search space used: 9137377676232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
