ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63p19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VPE_VICSA (P49044) Vacuolar processing enzyme precursor (EC 3.4.... 96 5e-20
2VPE1_PHAVU (O24325) Vacuolar processing enzyme precursor (EC 3.4... 96 5e-20
3VPE_CITSI (P49043) Vacuolar processing enzyme precursor (EC 3.4.... 94 3e-19
4VPEG_ARATH (Q39119) Vacuolar processing enzyme, gamma-isozyme pr... 94 3e-19
5VPEA_ARATH (P49047) Vacuolar processing enzyme, alpha-isozyme pr... 89 1e-17
6VPE_RICCO (P49042) Vacuolar processing enzyme precursor (EC 3.4.... 75 1e-13
7VPE_SOYBN (P49045) Vacuolar processing enzyme precursor (EC 3.4.... 69 6e-12
8VPE2_PHAVU (O24326) Vacuolar processing enzyme precursor (EC 3.4... 69 1e-11
9LEGU_CANEN (P49046) Legumain precursor (EC 3.4.22.34) (Asparagin... 66 5e-11
10VPEB_ARATH (Q39044) Vacuolar processing enzyme, beta-isozyme pre... 65 1e-10
11METH_HUMAN (Q99707) Methionine synthase (EC 2.1.1.13) (5-methylt... 33 0.37
12EST_ACILW (P18773) Esterase (EC 3.1.1.-) 32 1.4
13ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disint... 30 5.3
14CY1_EUGGR (P20114) Cytochrome c1, heme protein 30 5.3
15Y4ED_RHISN (P55427) Hypothetical 42.2 kDa protein y4eD 29 9.1

>VPE_VICSA (P49044) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
           (Proteinase B)
          Length = 493

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 43/63 (68%), Positives = 51/63 (80%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348
           K+ V+TFE+ CGSL+QYGMKHMRSFAN+CNAGI  E MA+ +AQAC S P NPWS+   G
Sbjct: 431 KTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGG 490

Query: 347 FSA 339
           FSA
Sbjct: 491 FSA 493



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>VPE1_PHAVU (O24325) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
           (Legumain-like proteinase) (LLP)
          Length = 484

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 42/63 (66%), Positives = 50/63 (79%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348
           K+ VRTFE+ CGSL+QYGMKHMRSFANMCN GI  E M + +AQAC + P NPWS+  +G
Sbjct: 422 KTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRG 481

Query: 347 FSA 339
           FSA
Sbjct: 482 FSA 484



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>VPE_CITSI (P49043) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
          Length = 494

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 42/63 (66%), Positives = 50/63 (79%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348
           KS VRTFES CG+L+QYGMKHMRS AN+CN GI  E MA+ +AQAC + P+ PWS+  KG
Sbjct: 432 KSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKG 491

Query: 347 FSA 339
           FSA
Sbjct: 492 FSA 494



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>VPEG_ARATH (Q39119) Vacuolar processing enzyme, gamma-isozyme precursor (EC|
           3.4.22.-) (Gamma-VPE)
          Length = 490

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 41/63 (65%), Positives = 51/63 (80%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348
           K+ VR FE  CGSL+QYG+KHMRSFAN+CNAGI  E M + A+QACT+ PT PWS+ ++G
Sbjct: 428 KNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRG 487

Query: 347 FSA 339
           FSA
Sbjct: 488 FSA 490



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>VPEA_ARATH (P49047) Vacuolar processing enzyme, alpha-isozyme precursor (EC|
           3.4.22.-) (Alpha-VPE)
          Length = 478

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 40/63 (63%), Positives = 47/63 (74%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348
           KS VR FE  CGSL+QYG+KHMRS ANMCNAGI    M + A QAC + PT+PWS+  +G
Sbjct: 416 KSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRG 475

Query: 347 FSA 339
           FSA
Sbjct: 476 FSA 478



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>VPE_RICCO (P49042) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
          Length = 497

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 33/63 (52%), Positives = 43/63 (68%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348
           KS VR FE+ CGSL QYGMKHMR+FAN+CNAG+   +M +    AC+      W  T++G
Sbjct: 435 KSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQG 494

Query: 347 FSA 339
           +SA
Sbjct: 495 YSA 497



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>VPE_SOYBN (P49045) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
          Length = 495

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 29/63 (46%), Positives = 43/63 (68%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348
           KS VR FE+ CG+L QYGMKHMR+FAN+CN+G+   +M +    AC  +    +  +++G
Sbjct: 433 KSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRG 492

Query: 347 FSA 339
           +SA
Sbjct: 493 YSA 495



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>VPE2_PHAVU (O24326) Vacuolar processing enzyme precursor (EC 3.4.22.-)|
           (Pv-VPE)
          Length = 493

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 30/63 (47%), Positives = 41/63 (65%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348
           KS VR +E+ CGSL QYGMKHMR+FAN+CN+G+   +M K    AC  +       ++ G
Sbjct: 431 KSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTG 490

Query: 347 FSA 339
           +SA
Sbjct: 491 YSA 493



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>LEGU_CANEN (P49046) Legumain precursor (EC 3.4.22.34) (Asparaginyl|
           endopeptidase)
          Length = 475

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348
           KS VR FE+ CGSL QYGMKHMR+F N+CN+G+   +M +    AC  +       ++ G
Sbjct: 413 KSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTG 472

Query: 347 FSA 339
           +SA
Sbjct: 473 YSA 475



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>VPEB_ARATH (Q39044) Vacuolar processing enzyme, beta-isozyme precursor (EC|
           3.4.22.-) (Beta-VPE)
          Length = 486

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = -1

Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSF 381
           KS VR FE  CGSL QYGMKHMR+FAN+CN G+  E M + +  AC  +
Sbjct: 422 KSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAACGGY 470



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>METH_HUMAN (Q99707) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent) (MS)
          Length = 1265

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 512 TFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQ 396
           TF S   + A YG++H+    NMC+AG+  +A  +V  Q
Sbjct: 97  TFSSTSIAQADYGLEHLAYRMNMCSAGVARKAAEEVTLQ 135



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>EST_ACILW (P18773) Esterase (EC 3.1.1.-)|
          Length = 303

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 431 IVPEAMAKVAAQACTSFPTNPWSATHKGFSA*TRGEE--AT*SLSQLLYHI 285
           + P A+  V  Q C  FP NP         A  RGEE  A  S +QL++HI
Sbjct: 28  LAPNALRPVLDQLCRLFPQNPTVQIRPIRLAGVRGEEIKAQASATQLIFHI 78



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>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 20) (ADAM-TS
            20) (ADAM-TS20)
          Length = 1906

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 9/57 (15%)
 Frame = -1

Query: 503  SQCGSLAQYGMKHMRSFANM---------CNAGIVPEAMAKVAAQACTSFPTNPWSA 360
            S+C      GMK  + +  +         CNA   PE++     +AC S+   PW +
Sbjct: 1027 SECPVTCGKGMKQRQVWCQLSEDPMRDGFCNASTKPESLRPCELRACASWHVGPWGS 1083



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>CY1_EUGGR (P20114) Cytochrome c1, heme protein|
          Length = 243

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 424 GTMPALHMFAKDRMCFIPYCANEPHWDSK 510
           GT  ++   AKD  CF+ +C+N P WD +
Sbjct: 173 GTPASVPQMAKDVTCFLEWCSN-PWWDER 200



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>Y4ED_RHISN (P55427) Hypothetical 42.2 kDa protein y4eD|
          Length = 375

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -1

Query: 461 RSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKGFSA*TRGE 324
           + FA    +   PE +A  A + C    T+P S  H G     RGE
Sbjct: 293 QGFATYHESNYYPEGVANSAGKCCFEHNTDPRSVAHGGIVPDYRGE 338


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,123,308
Number of Sequences: 219361
Number of extensions: 1579237
Number of successful extensions: 3199
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3199
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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