Clone Name | rbah63p19 |
---|---|
Clone Library Name | barley_pub |
>VPE_VICSA (P49044) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)| (Proteinase B) Length = 493 Score = 96.3 bits (238), Expect = 5e-20 Identities = 43/63 (68%), Positives = 51/63 (80%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348 K+ V+TFE+ CGSL+QYGMKHMRSFAN+CNAGI E MA+ +AQAC S P NPWS+ G Sbjct: 431 KTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGG 490 Query: 347 FSA 339 FSA Sbjct: 491 FSA 493
>VPE1_PHAVU (O24325) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)| (Legumain-like proteinase) (LLP) Length = 484 Score = 96.3 bits (238), Expect = 5e-20 Identities = 42/63 (66%), Positives = 50/63 (79%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348 K+ VRTFE+ CGSL+QYGMKHMRSFANMCN GI E M + +AQAC + P NPWS+ +G Sbjct: 422 KTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRG 481 Query: 347 FSA 339 FSA Sbjct: 482 FSA 484
>VPE_CITSI (P49043) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)| Length = 494 Score = 93.6 bits (231), Expect = 3e-19 Identities = 42/63 (66%), Positives = 50/63 (79%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348 KS VRTFES CG+L+QYGMKHMRS AN+CN GI E MA+ +AQAC + P+ PWS+ KG Sbjct: 432 KSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKG 491 Query: 347 FSA 339 FSA Sbjct: 492 FSA 494
>VPEG_ARATH (Q39119) Vacuolar processing enzyme, gamma-isozyme precursor (EC| 3.4.22.-) (Gamma-VPE) Length = 490 Score = 93.6 bits (231), Expect = 3e-19 Identities = 41/63 (65%), Positives = 51/63 (80%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348 K+ VR FE CGSL+QYG+KHMRSFAN+CNAGI E M + A+QACT+ PT PWS+ ++G Sbjct: 428 KNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRG 487 Query: 347 FSA 339 FSA Sbjct: 488 FSA 490
>VPEA_ARATH (P49047) Vacuolar processing enzyme, alpha-isozyme precursor (EC| 3.4.22.-) (Alpha-VPE) Length = 478 Score = 88.6 bits (218), Expect = 1e-17 Identities = 40/63 (63%), Positives = 47/63 (74%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348 KS VR FE CGSL+QYG+KHMRS ANMCNAGI M + A QAC + PT+PWS+ +G Sbjct: 416 KSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRG 475 Query: 347 FSA 339 FSA Sbjct: 476 FSA 478
>VPE_RICCO (P49042) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)| Length = 497 Score = 75.1 bits (183), Expect = 1e-13 Identities = 33/63 (52%), Positives = 43/63 (68%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348 KS VR FE+ CGSL QYGMKHMR+FAN+CNAG+ +M + AC+ W T++G Sbjct: 435 KSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQG 494 Query: 347 FSA 339 +SA Sbjct: 495 YSA 497
>VPE_SOYBN (P49045) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)| Length = 495 Score = 69.3 bits (168), Expect = 6e-12 Identities = 29/63 (46%), Positives = 43/63 (68%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348 KS VR FE+ CG+L QYGMKHMR+FAN+CN+G+ +M + AC + + +++G Sbjct: 433 KSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRG 492 Query: 347 FSA 339 +SA Sbjct: 493 YSA 495
>VPE2_PHAVU (O24326) Vacuolar processing enzyme precursor (EC 3.4.22.-)| (Pv-VPE) Length = 493 Score = 68.6 bits (166), Expect = 1e-11 Identities = 30/63 (47%), Positives = 41/63 (65%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348 KS VR +E+ CGSL QYGMKHMR+FAN+CN+G+ +M K AC + ++ G Sbjct: 431 KSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTG 490 Query: 347 FSA 339 +SA Sbjct: 491 YSA 493
>LEGU_CANEN (P49046) Legumain precursor (EC 3.4.22.34) (Asparaginyl| endopeptidase) Length = 475 Score = 66.2 bits (160), Expect = 5e-11 Identities = 29/63 (46%), Positives = 40/63 (63%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKG 348 KS VR FE+ CGSL QYGMKHMR+F N+CN+G+ +M + AC + ++ G Sbjct: 413 KSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTG 472 Query: 347 FSA 339 +SA Sbjct: 473 YSA 475
>VPEB_ARATH (Q39044) Vacuolar processing enzyme, beta-isozyme precursor (EC| 3.4.22.-) (Beta-VPE) Length = 486 Score = 65.1 bits (157), Expect = 1e-10 Identities = 28/49 (57%), Positives = 34/49 (69%) Frame = -1 Query: 527 KSTVRTFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQACTSF 381 KS VR FE CGSL QYGMKHMR+FAN+CN G+ E M + + AC + Sbjct: 422 KSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAACGGY 470
>METH_HUMAN (Q99707) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent) (MS) Length = 1265 Score = 33.5 bits (75), Expect = 0.37 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -1 Query: 512 TFESQCGSLAQYGMKHMRSFANMCNAGIVPEAMAKVAAQ 396 TF S + A YG++H+ NMC+AG+ +A +V Q Sbjct: 97 TFSSTSIAQADYGLEHLAYRMNMCSAGVARKAAEEVTLQ 135
>EST_ACILW (P18773) Esterase (EC 3.1.1.-)| Length = 303 Score = 31.6 bits (70), Expect = 1.4 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -1 Query: 431 IVPEAMAKVAAQACTSFPTNPWSATHKGFSA*TRGEE--AT*SLSQLLYHI 285 + P A+ V Q C FP NP A RGEE A S +QL++HI Sbjct: 28 LAPNALRPVLDQLCRLFPQNPTVQIRPIRLAGVRGEEIKAQASATQLIFHI 78
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 29.6 bits (65), Expect = 5.3 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 9/57 (15%) Frame = -1 Query: 503 SQCGSLAQYGMKHMRSFANM---------CNAGIVPEAMAKVAAQACTSFPTNPWSA 360 S+C GMK + + + CNA PE++ +AC S+ PW + Sbjct: 1027 SECPVTCGKGMKQRQVWCQLSEDPMRDGFCNASTKPESLRPCELRACASWHVGPWGS 1083
>CY1_EUGGR (P20114) Cytochrome c1, heme protein| Length = 243 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 Query: 424 GTMPALHMFAKDRMCFIPYCANEPHWDSK 510 GT ++ AKD CF+ +C+N P WD + Sbjct: 173 GTPASVPQMAKDVTCFLEWCSN-PWWDER 200
>Y4ED_RHISN (P55427) Hypothetical 42.2 kDa protein y4eD| Length = 375 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 Query: 461 RSFANMCNAGIVPEAMAKVAAQACTSFPTNPWSATHKGFSA*TRGE 324 + FA + PE +A A + C T+P S H G RGE Sbjct: 293 QGFATYHESNYYPEGVANSAGKCCFEHNTDPRSVAHGGIVPDYRGE 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,123,308 Number of Sequences: 219361 Number of extensions: 1579237 Number of successful extensions: 3199 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 3153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3199 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)