Clone Name | rbah63p18 |
---|---|
Clone Library Name | barley_pub |
>gb|DQ074926.1| Lactobacillus reuteri lr1730 (lr1730) gene, complete cds Length = 885 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 77 aaatgagatttaccgggcgaactacacaga 106 |||||||| ||||||||| ||||||||||| Sbjct: 84 aaatgagaattaccgggcaaactacacaga 113
>gb|AC153380.1| Mus musculus BAC RP23-256G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160046 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 37575 caaaagcgcaagagcgcaagcaaga 37599 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 33604 caaaagcgcaagagcgcaagcaaga 33628
>gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, complete sequence Length = 173716 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 112170 caaaagcgcaagagcgcaagcaaga 112146
>gb|AC154479.2| Mus musculus BAC clone RP24-135I6 from chromosome 9, complete sequence Length = 153964 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 26592 caaaagcgcaagagcgcaagcaaga 26568
>gb|AC157610.2| Mus musculus chromosome 15, clone RP23-77H12, complete sequence Length = 164913 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 21787 caaaagcgcaagagcgcaagcaaga 21811
>gb|AC160990.4| Mus musculus BAC clone RP23-172K2 from chromosome 12, complete sequence Length = 213387 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 78836 caaaagcgcaagagcgcaagcaaga 78812
>gb|AC119959.8| Mus musculus chromosome 15, clone RP24-467H19, complete sequence Length = 163783 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 16154 caaaagcgcaagagcgcaagcaaga 16130 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 12752 caaaagcgcaagagcgcaagcaaga 12728
>gb|AC119943.12| Mus musculus chromosome 10, clone RP24-271F24, complete sequence Length = 174009 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 139766 caaaagcgcaagagcgcaagcaaga 139790 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 136288 caaaagcgcaagagcgcaagcaaga 136312
>gb|AC131781.3| Mus musculus BAC clone RP24-344J9 from chromosome 15, complete sequence Length = 139338 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 36928 caaaagcgcaagagcgcaagcaaga 36952
>gb|AC125019.6| Mus musculus chromosome 19, clone RP24-158H8, complete sequence Length = 162617 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 84974 caaaagcgcaagagcgcaagcaaga 84998 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 80300 caaaagcgcaagagcgcaagcaaga 80324
>gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, complete sequence Length = 192286 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 87304 caaaagcgcaagagcgcaagcaaga 87280 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 77247 caaaagcgcaagagcgcaagcaaga 77223
>gb|AC115742.13| Mus musculus chromosome 7, clone RP23-477E13, complete sequence Length = 186195 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 79588 caaaagcgcaagagcgcaagcaaga 79564 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 76234 caaaagcgcaagagcgcaagcaaga 76210
>gb|AC132377.3| Mus musculus BAC clone RP24-81F14 from chromosome 16, complete sequence Length = 173662 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 114640 caaaagcgcaagagcgcaagcaaga 114616 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 103679 caaaagcgcaagagcgcaagcaaga 103655
>gb|AC122055.4| Mus musculus BAC clone RP24-465O15 from chromosome 17, complete sequence Length = 159138 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 25242 caaaagcgcaagagcgcaagcaaga 25218 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 21902 caaaagcgcaagagcgcaagcaaga 21878
>gb|AC121914.3| Mus musculus BAC clone RP24-186A10 from chromosome 3, complete sequence Length = 172937 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 48850 caaaagcgcaagagcgcaagcaaga 48826
>gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete sequence Length = 256751 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 9772 caaaagcgcaagagcgcaagcaaga 9796 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 6312 caaaagcgcaagagcgcaagcaaga 6336
>gb|AC124752.4| Mus musculus BAC clone RP23-283G18 from 13, complete sequence Length = 215435 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 56712 caaaagcgcaagagcgcaagcaaga 56688 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 52016 caaaagcgcaagagcgcaagcaaga 51992
>gb|AC127312.4| Mus musculus BAC clone RP23-306F21 from 15, complete sequence Length = 194254 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 19927 caaaagcgcaagagcgcaagcaaga 19951
>gb|AC117216.3| Mus musculus BAC clone RP23-310O5 from 2, complete sequence Length = 184628 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 55113 caaaagcgcaagagcgcaagcaaga 55137
>gb|AC121600.2| Mus musculus BAC clone RP23-302K1 from 17, complete sequence Length = 199296 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 186889 caaaagcgcaagagcgcaagcaaga 186865 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 183549 caaaagcgcaagagcgcaagcaaga 183525
>gb|AC122028.3| Mus musculus BAC clone RP24-394D4 from 2, complete sequence Length = 173301 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 74311 caaaagcgcaagagcgcaagcaaga 74335
>gb|AC005817.8| Mus musculus strain 129/Sv clone ct7-581i11 map 16, complete sequence Length = 188708 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 52190 caaaagcgcaagagcgcaagcaaga 52214
>emb|AL606829.13| Mouse DNA sequence from clone RP23-10M12 on chromosome 11 Contains a novel gene (MOR280-1) similar to the olfactory receptor family, a novel gene (D330012D11Rik), the Zfp62 gene for zinc finger protein 62, the Mgat1 gene for mannoside acetylglucosaminyltransferase 1, a novel gene (MOR256-24) similar to the olfactory receptor family, a novel gene (MOR256-25) similar to the olfactory receptor family, a novel gene (LOC216715) similar to the olfactory receptor MOR256 family, a novel gene (MOR256-27) similar to the olfactory receptor family, a novel gene (MOR256-2) similar to the olfactory receptor family and three CpG islands, complete sequence Length = 203286 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 43354 caaaagcgcaagagcgcaagcaaga 43378
>gb|AC154303.2| Mus musculus BAC clone RP23-387F19 from chromosome 14, complete sequence Length = 199995 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 140020 caaaagcgcaagagcgcaagcaaga 140044
>emb|AL669912.7| Mouse DNA sequence from clone RP23-147K24 on chromosome 11 Contains a serine/threonine kinase 16 (Stk16) pseudogene pseudogene, complete sequence Length = 174954 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 153693 caaaagcgcaagagcgcaagcaaga 153669
>gb|AC158973.3| Mus musculus chromosome 15, clone RP24-236A19, complete sequence Length = 187091 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 116645 caaaagcgcaagagcgcaagcaaga 116669 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 111450 caaaagcgcaagagcgcaagcaaga 111474
>gb|AC003063.7| Mus musculus Chromosome 16 BAC Clone b40-o20 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 128143 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 121383 caaaagcgcaagagcgcaagcaaga 121407
>emb|AL845159.4| Mouse DNA sequence from clone RP23-263O22 on chromosome 2, complete sequence Length = 166493 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 105960 caaaagcgcaagagcgcaagcaaga 105984
>gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome 13, complete sequence Length = 176432 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 7680 caaaagcgcaagagcgcaagcaaga 7656
>gb|AC113069.10| Mus musculus chromosome 15, clone RP23-269F24, complete sequence Length = 192825 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 61017 caaaagcgcaagagcgcaagcaaga 61041 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 57615 caaaagcgcaagagcgcaagcaaga 57639
>gb|AC137711.21| Mus musculus chromosome 5, clone RP23-282A16, complete sequence Length = 181459 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 108729 caaaagcgcaagagcgcaagcaaga 108753
>gb|AC158519.2| Mus musculus BAC clone RP24-87O4 from chromosome 14, complete sequence Length = 236374 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 81148 caaaagcgcaagagcgcaagcaaga 81124 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 78393 caaaagcgcaagagcgcaagcaaga 78369
>gb|AC154361.2| Mus musculus BAC clone RP23-170I24 from chromosome 14, complete sequence Length = 202760 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 16873 caaaagcgcaagagcgcaagcaaga 16897
>gb|AC102411.12| Mus musculus chromosome 18, clone RP24-374D7, complete sequence Length = 171918 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 14842 caaaagcgcaagagcgcaagcaaga 14866
>gb|AC101819.10| Mus musculus chromosome 15, clone RP24-375C3, complete sequence Length = 131280 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 55660 caaaagcgcaagagcgcaagcaaga 55636 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 50466 caaaagcgcaagagcgcaagcaaga 50442
>gb|AC093570.30| Mus musculus strain C57BL/6J chromosome 5 clone rp23-115a12, complete sequence Length = 203838 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 38205 caaaagcgcaagagcgcaagcaaga 38229
>gb|AC079043.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-397e16, complete sequence Length = 214471 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 52217 caaaagcgcaagagcgcaagcaaga 52241
>gb|AC167420.1| Mus musculus BAC clone RP23-239F23 from chromosome 12, complete sequence Length = 185684 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 117335 caaaagcgcaagagcgcaagcaaga 117359
>emb|AL928950.8| Mouse DNA sequence from clone RP23-70E1 on chromosome 2, complete sequence Length = 157063 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 77606 caaaagcgcaagagcgcaagcaaga 77630
>emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on chromosome 2, complete sequence Length = 161244 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 66166 caaaagcgcaagagcgcaagcaaga 66142 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 63396 caaaagcgcaagagcgcaagcaaga 63372 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 60618 caaaagcgcaagagcgcaagcaaga 60594 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 57808 caaaagcgcaagagcgcaagcaaga 57784 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 54998 caaaagcgcaagagcgcaagcaaga 54974
>emb|CT572986.11| Mouse DNA sequence from clone RP23-32M23 on chromosome 13, complete sequence Length = 76596 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 40653 caaaagcgcaagagcgcaagcaaga 40629
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 100180 caaaagcgcaagagcgcaagcaaga 100156
>gb|AC113018.7| Mus musculus chromosome 5, clone RP23-183C18, complete sequence Length = 215671 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 102829 caaaagcgcaagagcgcaagcaaga 102805 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 99447 caaaagcgcaagagcgcaagcaaga 99423
>gb|AC161481.4| Mus musculus chromosome 18, clone RP23-336C20, complete sequence Length = 210643 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 95203 caaaagcgcaagagcgcaagcaaga 95179
>gb|AC084322.17| Mus musculus strain C57BL/6J chromosome 5 clone rp23-376e18, complete sequence Length = 104872 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 77720 caaaagcgcaagagcgcaagcaaga 77744
>gb|AC102764.12| Mus musculus chromosome 8, clone RP24-266L17, complete sequence Length = 185178 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 106276 caaaagcgcaagagcgcaagcaaga 106252
>gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, complete sequence Length = 237801 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 18865 caaaagcgcaagagcgcaagcaaga 18841
>emb|CT030651.6| Mouse DNA sequence from clone RP23-229N10 on chromosome 9, complete sequence Length = 128191 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 124539 caaaagcgcaagagcgcaagcaaga 124563
>gb|AC127238.5| Mus musculus BAC clone RP24-378P20 from 7, complete sequence Length = 224224 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 213330 caaaagcgcaagagcgcaagcaaga 213354 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 209920 caaaagcgcaagagcgcaagcaaga 209944
>emb|CT010453.10| Mouse DNA sequence from clone RP23-173H11 on chromosome 14, complete sequence Length = 199017 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 22762 caaaagcgcaagagcgcaagcaaga 22738 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 20007 caaaagcgcaagagcgcaagcaaga 19983
>gb|AC087064.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-428i4, complete sequence Length = 211848 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 182541 caaaagcgcaagagcgcaagcaaga 182517
>gb|AC078895.34| Mus musculus strain C57BL/6J chromosome 16 clone rp23-372h6, complete sequence Length = 211256 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 34256 caaaagcgcaagagcgcaagcaaga 34232
>gb|AC172366.1| Mus musculus BAC clone RP24-499J10 from chromosome 7, complete sequence Length = 171297 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 139724 caaaagcgcaagagcgcaagcaaga 139700 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 136314 caaaagcgcaagagcgcaagcaaga 136290
>gb|AC109180.20| Mus musculus chromosome 10, clone RP23-13J14, complete sequence Length = 212628 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 127980 caaaagcgcaagagcgcaagcaaga 127956 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 124636 caaaagcgcaagagcgcaagcaaga 124612
>gb|AC100561.13| Mus musculus chromosome 1, clone RP23-154C4, complete sequence Length = 207939 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 165702 caaaagcgcaagagcgcaagcaaga 165726 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 162242 caaaagcgcaagagcgcaagcaaga 162266
>emb|AL928638.7| Mouse DNA sequence from clone RP23-377E1 on chromosome 2, complete sequence Length = 128608 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 15867 caaaagcgcaagagcgcaagcaaga 15891
>gb|AC162921.3| Mus musculus BAC clone RP23-342H1 from chromosome 9, complete sequence Length = 254666 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 133204 caaaagcgcaagagcgcaagcaaga 133228
>emb|AL773591.7| Pig DNA sequence from clone XX-35B1, complete sequence Length = 118404 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 513 agtggtggctgctttgattgacatgtgta 541 |||||||||||||||||| || ||||||| Sbjct: 28103 agtggtggctgctttgatagaaatgtgta 28131
>emb|AL645972.10| Mouse DNA sequence from clone RP23-274J5 on chromosome 11, complete sequence Length = 192586 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 170876 caaaagcgcaagagcgcaagcaaga 170900
>emb|AL772407.4| Mouse DNA sequence from clone RP23-112N9 on chromosome 2, complete sequence Length = 202231 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 122027 caaaagcgcaagagcgcaagcaaga 122051
>emb|AL732495.11| Mouse DNA sequence from clone RP23-76E19 on chromosome 2, complete sequence Length = 164199 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 caaaaacgcaagagcgcaagcaaga 305 ||||| ||||||||||||||||||| Sbjct: 27009 caaaagcgcaagagcgcaagcaaga 26985
>emb|AL731725.8| Mouse DNA sequence from clone RP23-146P19 on chromosome X, complete sequence Length = 213743 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 aacgcaagagcgcaagcaaga 305 ||||||||||||||||||||| Sbjct: 203708 aacgcaagagcgcaagcaaga 203688
>gb|AC138671.16| Mus musculus chromosome 5, clone RP23-443N7, complete sequence Length = 196443 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 ctgaggagggaaccagccaccatt 483 |||| ||||||||||||||||||| Sbjct: 151530 ctgatgagggaaccagccaccatt 151553
>emb|BX511111.16| Zebrafish DNA sequence from clone RP71-62I8 in linkage group 17, complete sequence Length = 123253 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ttgcaaaatatatcgcagaa 274 |||||||||||||||||||| Sbjct: 24774 ttgcaaaatatatcgcagaa 24793
>emb|BX247888.10| Zebrafish DNA sequence from clone DKEY-10D15 in linkage group 9, complete sequence Length = 223425 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ctacaggcctttgcaaaata 264 |||||||||||||||||||| Sbjct: 147412 ctacaggcctttgcaaaata 147431
>emb|BX629347.20| Zebrafish DNA sequence from clone DKEY-103K21 in linkage group 12, complete sequence Length = 200079 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ttgcaaaatatatcgcagaa 274 |||||||||||||||||||| Sbjct: 150385 ttgcaaaatatatcgcagaa 150404
>gb|AY129335.1| Mycobacteriophage Corndog, complete genome Length = 69777 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tctaacaaagttagagaaag 244 |||||||||||||||||||| Sbjct: 4739 tctaacaaagttagagaaag 4758
>gb|AC131157.4| Homo sapiens 12 BAC RP11-70F11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180907 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gtgcttgcaacggtgtgtta 52 |||||||||||||||||||| Sbjct: 85357 gtgcttgcaacggtgtgtta 85376
>gb|AC099702.12| Mus musculus chromosome 1, clone RP23-218F13, complete sequence Length = 195716 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 aaaaacgcaagagcgcaagcaaga 305 |||| ||||||||||||||||||| Sbjct: 147517 aaaagcgcaagagcgcaagcaaga 147540
>gb|AC117640.14| Mus musculus chromosome 5, clone RP23-228I1, complete sequence Length = 138354 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 ctgaggagggaaccagccaccatt 483 |||| ||||||||||||||||||| Sbjct: 44912 ctgatgagggaaccagccaccatt 44889
>gb|AY874393.1| Solanum berthaultii isolate CD5 cultivar B11B, genomic sequence Length = 440 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gatgatacatcaaatgagat 85 |||||||||||||||||||| Sbjct: 384 gatgatacatcaaatgagat 365
>gb|AY874392.1| Solanum tuberosum isolate CD5 cultivar USW-2230 Saco, genomic sequence Length = 440 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gatgatacatcaaatgagat 85 |||||||||||||||||||| Sbjct: 384 gatgatacatcaaatgagat 365
>dbj|AB231867.1| Nematostella vectensis gene for zinc finger protein Nv-ZicA, complete cds Length = 186420 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 agaaggatcacaaaaacgca 290 |||||||||||||||||||| Sbjct: 115027 agaaggatcacaaaaacgca 115046
>gb|AC158942.7| Mus musculus chromosome 5, clone RP23-240A11, complete sequence Length = 194039 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 ctgaggagggaaccagccaccatt 483 |||| ||||||||||||||||||| Sbjct: 180081 ctgatgagggaaccagccaccatt 180058 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,809,129 Number of Sequences: 3902068 Number of extensions: 3809129 Number of successful extensions: 66835 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66667 Number of HSP's gapped (non-prelim): 168 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)