Clone Name | rbah63p10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | IF2_NITWN (Q3SWP9) Translation initiation factor IF-2 | 30 | 6.3 | 2 | SPAG6_HUMAN (O75602) Sperm-associated antigen 6 (PF16 protein ho... | 30 | 6.3 |
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>IF2_NITWN (Q3SWP9) Translation initiation factor IF-2| Length = 871 Score = 29.6 bits (65), Expect = 6.3 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +2 Query: 65 DDGYFPITNWNTSEMLAHGKTETVSKIIAGKVIREPQCK-ERNHVQVQVHDQAADSL*GE 241 DDG P T E + H K V IIA I +P+ K ER ++ H+ +S+ G+ Sbjct: 452 DDGVMP----QTIEAINHAKAAKVPMIIAINKIDKPEAKPERVRTELLQHEVQVESMGGQ 507
>SPAG6_HUMAN (O75602) Sperm-associated antigen 6 (PF16 protein homolog) (Sperm| flagellar protein) (Repro-SA-1) Length = 509 Score = 29.6 bits (65), Expect = 6.3 Identities = 14/25 (56%), Positives = 20/25 (80%) Frame = -2 Query: 560 YVKSAASTVVKRPLAQHTPELTAMV 486 YVK AST++ R +A+HTPEL+ +V Sbjct: 266 YVKKNASTLI-REIAKHTPELSQLV 289 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,255,196 Number of Sequences: 219361 Number of extensions: 1148408 Number of successful extensions: 2892 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2821 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2891 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)