ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63p09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF306827.1|AF306827 Triticum monococcum subsp. monococcum clone 437 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1812 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 56 tttttcagttcaaatttaactgcaaaaacgtctta 90 |||| ||||||||||| |||||||||||||||||| Sbjct: 715 ttttgcagttcaaattgaactgcaaaaacgtctta 749 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 56 tttttcagttcaaatttaactgcaaaaacgtctta 90 |||| |||||||| || |||||||||||||||||| Sbjct: 741 ttttgcagttcaatttgaactgcaaaaacgtctta 707
>gb|AF306828.1|AF306828 Triticum turgidum subsp. dicoccoides clone 465 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1836 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 62 agttcaaatttaactgcaaaaacgtcttacatta 95 |||||||||| |||||||||||||||||| |||| Sbjct: 735 agttcaaattgaactgcaaaaacgtcttatatta 702
>gb|AF306829.1|AF306829 Triticum urartu clone 581 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1812 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 62 agttcaaatttaactgcaaaaacgtctta 90 |||||||||| |||||||||||||||||| Sbjct: 735 agttcaaattgaactgcaaaaacgtctta 707
>gb|AF306824.1|AF306824 Triticum timopheevii subsp. armeniacum clone 453 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1812 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 62 agttcaaatttaactgcaaaaacgtctta 90 |||||||||| |||||||||||||||||| Sbjct: 735 agttcaaattgaactgcaaaaacgtctta 707
>gb|AC157213.2| Mus musculus BAC clone RP23-157N5 from chromosome 12, complete sequence Length = 211304 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 375 cagaaaagaacggagcacttct 396 |||||||||||||||||||||| Sbjct: 126441 cagaaaagaacggagcacttct 126420
>gb|AC166341.3| Mus musculus BAC clone RP23-430C21 from chromosome 12, complete sequence Length = 196418 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 97466 aatgcaagacatttttcagtt 97446
>gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosome 12, complete sequence Length = 202733 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 191882 aatgcaagacatttttcagtt 191862
>gb|AC163041.3| Mus musculus BAC clone RP23-32K16 from chromosome 12, complete sequence Length = 254666 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 161957 aatgcaagacatttttcagtt 161937 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 80748 aatgcaagacatttttcagtt 80728
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 actgataagtactccctatgtaaactaat 47 ||||| ||||||||||| ||||||||||| Sbjct: 103759 actgacaagtactccctttgtaaactaat 103731
>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence Length = 241834 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 138319 aatgcaagacatttttcagtt 138299
>gb|AC156037.6| Mus musculus BAC clone RP23-138L1 from chromosome 12, complete sequence Length = 217016 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 210273 aatgcaagacatttttcagtt 210253
>gb|AC136922.8| Mus musculus chromosome 1, clone RP23-81L22, complete sequence Length = 225579 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 ctcaaatctacaaatatgttcacat 189 |||||||||||||| |||||||||| Sbjct: 78236 ctcaaatctacaaaaatgttcacat 78260
>gb|AC130830.3| Mus musculus BAC clone RP23-474G1 from chromosome 12, complete sequence Length = 199958 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 148022 aatgcaagacatttttcagtt 148002 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 37743 aatgcaagacatttttcagtt 37723
>gb|AC153794.6| Mus musculus BAC clone RP23-128I24 from chromosome 12, complete sequence Length = 208105 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 2937 aatgcaagacatttttcagtt 2957
>gb|AC124739.2| Mus musculus BAC clone RP23-344H4 from chromosome 12, complete sequence Length = 224632 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 15193 aatgcaagacatttttcagtt 15213
>gb|AC124530.4| Mus musculus BAC clone RP23-286D7 from chromosome 12, complete sequence Length = 174849 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 107444 aatgcaagacatttttcagtt 107464
>emb|Z66499.1|CET01B7 Caenorhabditis elegans Cosmid T01B7, complete sequence Length = 26180 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 aagacatttttcagttcaaat 70 ||||||||||||||||||||| Sbjct: 18602 aagacatttttcagttcaaat 18582
>gb|AC153663.6| Mus musculus BAC clone RP23-12J8 from chromosome 12, complete sequence Length = 248166 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 154705 aatgcaagacatttttcagtt 154725
>gb|AC153662.6| Mus musculus BAC clone RP23-24I10 from chromosome 12, complete sequence Length = 216041 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 156992 aatgcaagacatttttcagtt 156972
>gb|AC140930.3| Mus musculus BAC clone RP23-116P20 from chromosome 12, complete sequence Length = 201455 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 176450 aatgcaagacatttttcagtt 176430
>emb|BX323027.8| Zebrafish DNA sequence from clone CH211-242D13, complete sequence Length = 139257 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 tggctcatttcagatgtccccaatt 331 |||| |||||||||||||||||||| Sbjct: 55419 tggcacatttcagatgtccccaatt 55443
>emb|BX255898.9| Zebrafish DNA sequence from clone CH211-248J19, complete sequence Length = 181912 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 tggctcatttcagatgtccccaatt 331 |||| |||||||||||||||||||| Sbjct: 100751 tggcacatttcagatgtccccaatt 100727
>gb|AC132472.3| Mus musculus BAC clone RP23-113B13 from chromosome 12, complete sequence Length = 214333 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 113546 aatgcaagacatttttcagtt 113566 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 25792 aatgcaagacatttttcagtt 25812
>emb|BX119908.8| Zebrafish DNA sequence from clone CH211-225A3 in linkage group 11, complete sequence Length = 121802 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ccaattaaactggctcatttc 346 ||||||||||||||||||||| Sbjct: 61317 ccaattaaactggctcatttc 61297
>gb|AC134254.3| Mus musculus BAC clone RP23-474M18 from 12, complete sequence Length = 191070 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 165308 aatgcaagacatttttcagtt 165288 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 28513 aatgcaagacatttttcagtt 28493
>gb|AC127242.3| Mus musculus BAC clone RP24-404P19 from 12, complete sequence Length = 171990 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 166466 aatgcaagacatttttcagtt 166446
>gb|AF056881.1|AF056881 Hepatitis C virus 68_CL11 genome polyprotein gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 gcgctgttctacaccagcaaa 475 ||||||||||||||||||||| Sbjct: 222 gcgctgttctacaccagcaaa 242
>gb|AC124772.4| Mus musculus BAC clone RP23-47P3 from 12, complete sequence Length = 218340 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 79503 aatgcaagacatttttcagtt 79483
>gb|AC122351.5| Mus musculus BAC clone RP23-388H1 from 12, complete sequence Length = 201060 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 84866 aatgcaagacatttttcagtt 84846
>gb|AC130829.4| Mus musculus BAC clone RP23-451I11 from 12, complete sequence Length = 189692 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 163649 aatgcaagacatttttcagtt 163629 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 52827 aatgcaagacatttttcagtt 52807
>gb|AC163633.4| Mus musculus BAC clone RP24-177N8 from chromosome 12, complete sequence Length = 178326 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 156073 aatgcaagacatttttcagtt 156093
>gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome 12, complete sequence Length = 199499 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aatgcaagacatttttcagtt 65 ||||||||||||||||||||| Sbjct: 63554 aatgcaagacatttttcagtt 63574
>gb|AC165256.2| Mus musculus BAC clone RP23-216O10 from chromosome 9, complete sequence Length = 231728 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tccctatgtaaactaatgca 50 |||||||||||||||||||| Sbjct: 45991 tccctatgtaaactaatgca 46010
>gb|AC009256.9| Drosophila melanogaster clone BACR03G18, complete sequence Length = 179931 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 atttcagatgtccccaatta 332 |||||||||||||||||||| Sbjct: 147354 atttcagatgtccccaatta 147335
>gb|AC013351.7| Drosophila melanogaster clone BACR06H06, complete sequence Length = 186935 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 taaactaatgcaagacatttttca 62 ||||||||||||| |||||||||| Sbjct: 112569 taaactaatgcaacacatttttca 112592
>gb|AC010707.17| Drosophila melanogaster clone BACR06P10, complete sequence Length = 176969 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 atttcagatgtccccaatta 332 |||||||||||||||||||| Sbjct: 32756 atttcagatgtccccaatta 32737
>gb|AC018484.5| Drosophila melanogaster clone BACR13A13, complete sequence Length = 172746 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 taaactaatgcaagacatttttca 62 ||||||||||||| |||||||||| Sbjct: 38715 taaactaatgcaacacatttttca 38738
>gb|AC116658.4| Mus musculus BAC clone RP23-293I4 from 17, complete sequence Length = 199182 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 atgcaagacatttttcagtt 65 |||||||||||||||||||| Sbjct: 121114 atgcaagacatttttcagtt 121095
>ref|XM_662498.1| Cryptosporidium hominis TU502 DEAD/DEAH box RNA helicase (Chro.60555) partial mRNA Length = 1632 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aactgcagaaacatcttgta 134 |||||||||||||||||||| Sbjct: 1041 aactgcagaaacatcttgta 1022
>emb|AL354864.16| Human DNA sequence from clone RP11-435D7 on chromosome 1 Contains the 5' end of the PSMB2 gene for proteasome (prosome, macropain) subunit, beta type, 2, a novel transcript (FLJ38984), a putative novel transcript, the CLSPN gene for claspin homolog (Xenopus laevis) and the 5' end of the EIF2C4 gene for eukaryotic translation initiation factor 2C, 4, complete sequence Length = 194296 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 atttttcagttcaaatttaa 74 |||||||||||||||||||| Sbjct: 178364 atttttcagttcaaatttaa 178345
>emb|AL121986.12|HSBA101J8 Human DNA sequence from clone RP11-101J8 on chromosome 1q21.2-22 Contains the CD1A gene for CD1A antigen, a polypeptide, a high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene, the CD1C gene for CD1C antigen, c polypeptide, the CD1B gene for CD1B antigen, b polypeptide, the CD1E gene for CD1E antigen, e polypeptide, the OR10T2 gene for olfactory receptor, family 10, subfamily T, member 2 and the OR10K2 gene for olfactory receptor, family 10, subfamily K, member 2, complete sequence Length = 168753 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gattttcagtccagactgaa 116 |||||||||||||||||||| Sbjct: 22459 gattttcagtccagactgaa 22478
>emb|AL021877.1|HS101G11 Human DNA sequence from clone RP1-101G11 on chromosome 22q12, complete sequence Length = 150236 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 tatcagtttattcatatata 222 |||||||||||||||||||| Sbjct: 30351 tatcagtttattcatatata 30370
>emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 4/4 Length = 277703 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aactgcagaaacatcttgta 134 |||||||||||||||||||| Sbjct: 115497 aactgcagaaacatcttgta 115478
>ref|XM_627810.1| Cryptosporidium parvum Iowa II Drs1p (cgd6_4830), partial mRNA Length = 1722 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aactgcagaaacatcttgta 134 |||||||||||||||||||| Sbjct: 1131 aactgcagaaacatcttgta 1112
>gb|AC160147.6| Mus musculus 10 BAC RP24-576A6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 145198 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ttcacatagatcttgcaaac 202 |||||||||||||||||||| Sbjct: 43316 ttcacatagatcttgcaaac 43335
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 acatttttcagttcaaattt 72 |||||||||||||||||||| Sbjct: 27829989 acatttttcagttcaaattt 27829970
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0439B07 Length = 89475 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 acatttttcagttcaaattt 72 |||||||||||||||||||| Sbjct: 84446 acatttttcagttcaaattt 84427
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 acatttttcagttcaaattt 72 |||||||||||||||||||| Sbjct: 38067 acatttttcagttcaaattt 38048
>emb|CT571254.7| Mouse DNA sequence from clone RP23-335F6 on chromosome 12, complete sequence Length = 189879 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 cttgcaaactatcagtttattcat 217 |||||||| ||||||||||||||| Sbjct: 98729 cttgcaaattatcagtttattcat 98706
>gb|AE003782.4| Drosophila melanogaster chromosome 2L, section 81 of 83 of the complete sequence Length = 298116 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 taaactaatgcaagacatttttca 62 ||||||||||||| |||||||||| Sbjct: 257423 taaactaatgcaacacatttttca 257446
>gb|AE003501.4| Drosophila melanogaster chromosome X, section 53 of 74 of the complete sequence Length = 323840 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 atttcagatgtccccaatta 332 |||||||||||||||||||| Sbjct: 182428 atttcagatgtccccaatta 182409
>emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in linkage group 18, complete sequence Length = 152902 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cagttcaaatttaactgcaa 80 |||||||||||||||||||| Sbjct: 141959 cagttcaaatttaactgcaa 141978
>emb|AL591417.9| Mouse DNA sequence from clone RP23-272C1 on chromosome 11, complete sequence Length = 131385 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tgcaaactatcagtttattcatat 219 |||||||||||| ||||||||||| Sbjct: 129656 tgcaaactatcattttattcatat 129679
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 taagtactccctatgtaaactaat 47 |||||||||||| ||||||||||| Sbjct: 1030 taagtactccctctgtaaactaat 1007
>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete sequence Length = 213801 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ttcacatagatcttgcaaac 202 |||||||||||||||||||| Sbjct: 132541 ttcacatagatcttgcaaac 132522
>dbj|AP002532.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 1/4 Length = 300000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gattttcagtccagactgaa 116 |||||||||||||||||||| Sbjct: 101189 gattttcagtccagactgaa 101208
>dbj|AB045357.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:893n23, complete sequence Length = 132131 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gattttcagtccagactgaa 116 |||||||||||||||||||| Sbjct: 101189 gattttcagtccagactgaa 101208
>emb|AL591165.17| Mouse DNA sequence from clone RP23-336D20 on chromosome 11, complete sequence Length = 123050 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 tgcaaactatcagtttattcatat 219 |||||||||||| ||||||||||| Sbjct: 122780 tgcaaactatcattttattcatat 122757 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,760,607 Number of Sequences: 3902068 Number of extensions: 4760607 Number of successful extensions: 93688 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93576 Number of HSP's gapped (non-prelim): 112 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
