>ZNF25_HUMAN (P17030) Zinc finger protein 25 (Zinc finger protein KOX19)|
          Length = 456

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 175 QCLLSAQALCEKNANILDSSKMRLGRIQHCDKCVDSFNIQHGQIQH 312
           +C    +  C+K+A I+       G+   CDKC  SF+     I+H
Sbjct: 119 ECKECGKFFCQKSALIVHQHTHSKGKSYDCDKCGKSFSKNEDLIRH 164

>YL673_MIMIV (Q5UNT1) Putative serine/threonine-protein kinase L673 (EC|
           2.7.11.1)
          Length = 545

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
 Frame = -2

Query: 348 MDPFELYLTHNQVLNLP--VLNIERI-----HTFVTVLNSSESHFTAI 226
           MD +  Y+T N+ L L   +LN+ RI     HTF + +N  +S+F  I
Sbjct: 1   MDQYNKYITTNKRLGLVNWMLNVSRIFKLRSHTFQSAVNIMDSYFLKI 48

>UBP5_YEAST (P39944) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 5)
           (Ubiquitin-specific-processing protease 5)
           (Deubiquitinating enzyme 5)
          Length = 805

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 19/53 (35%), Positives = 23/53 (43%)
 Frame = -1

Query: 394 LQGILKESHSLFAMFHGPIRTLLDTQPSAEFARAEY*KNPHICHSAEFFRVSF 236
           LQ I     S    FHG    L+D +P +EF RA       IC     F+ SF
Sbjct: 144 LQTIEPGKLSSMLHFHGDALLLIDVRPRSEFVRAHIKCKNIICIDPASFKDSF 196

>ZNF38_HUMAN (P17036) Zinc finger protein 38 (Zinc finger protein KOX25) (Zinc|
           finger protein HF.12) (Zinc finger protein 3) (HZF3.1
           protein)
          Length = 446

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 211 NANILDSSKMRLGRIQH-CDKCVDSFNIQHGQIQH 312
           N+N++   ++ +G   H CD+C  SFN     IQH
Sbjct: 184 NSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQH 218

>RPOC2_NEPOL (Q9TL04) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP)|
            (Plastid-encoded RNA polymerase beta'' subunit) (RNA
            polymerase beta'' subunit)
          Length = 1463

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -1

Query: 412  LVRLWALQGILKESHSLFAMFHGPIRTLLDTQPSAEFARAEY*KNPHICH 263
            +++LW L  I+    ++ AMFH   R   D +   E     Y   P+ C+
Sbjct: 1358 MLKLWVLPPIITGQSTMRAMFHSTTRYWQDLEAVMESPNKLYPVTPYKCY 1407

>FANCC_BOVIN (O19104) Fanconi anemia group C protein homolog (Protein FACC)|
          Length = 567

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
 Frame = +1

Query: 127 PYLLKNGTLILAS*TTQCLL---SAQALCEKNANILDSSKMRLGRIQHCDKCVDSFNIQH 297
           P LLKN  L L S   +  L   S+Q  C +    L   ++ L  +   +  V++    H
Sbjct: 148 PGLLKNMVLSLVSELRENHLNGFSSQRRCPERVRSLSRDRVPLLTLPDFEPLVEALLTYH 207

Query: 298 GQIQHLVVCQVKFEWVHETSRKANEILSIFLAMPTSEL 411
           G     V+C   F+ V+E S      L   +++PTS +
Sbjct: 208 GHEPQEVLCPEFFDAVNEAS------LLKKISLPTSAI 239

>YB9F_YEAST (P38338) Hypothetical 80.4 kDa protein in POP4-SHM1 intergenic|
           region
          Length = 688

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 158 WHHRLRSACYLLKRCVKKMLTF*IAVK*DSEEFSTVTNV 274
           +HH+ RS   ++ +C+KK L   +A    S EFS+ T+V
Sbjct: 45  FHHKTRSGKTVIYKCIKKALLSSVASL--SSEFSSETDV 81

>PUR1_CHICK (P28173) Amidophosphoribosyltransferase precursor (EC 2.4.2.14)|
           (Glutamine phosphoribosylpyrophosphate amidotransferase)
           (ATASE) (GPAT)
          Length = 510

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 205 EKNANILDSSKMRLGRIQHCDKCV 276
           ++N N L + K R+G+I HC  C+
Sbjct: 477 KENENSLKTQKSRVGKIGHCTACL 500

>HIS8_CORDI (P60999) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 366

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 406 RLWALQGILKESHSLFAMFHGPIRTLLDTQPS 311
           +LWA  G  +    L   F GP RT+L  QPS
Sbjct: 91  QLWAANGSNEVLQQLLQAFGGPGRTVLGFQPS 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,722,731
Number of Sequences: 219361
Number of extensions: 1016617
Number of successful extensions: 2110
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2110
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)