ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63o15 |
|---|---|
| Clone Library Name | barley_pub |
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 73.9 bits (180), Expect = 1e-13 Identities = 33/39 (84%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DHIADPVN NAWAFATNF PG Sbjct: 228 GFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPG 266
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 73.9 bits (180), Expect = 1e-13 Identities = 33/39 (84%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DHIADPVN NAWAFATNF PG Sbjct: 228 GFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPG 266
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 73.9 bits (180), Expect = 1e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 228 GFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPG 266
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 73.9 bits (180), Expect = 1e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 228 GFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPG 266
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 263
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 263
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 85 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 123
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/40 (80%), Positives = 36/40 (90%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPGS 65 GF VQAIVTGKGP++NL DHIADPVN NAWA+ATNF PG+ Sbjct: 223 GFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGN 262
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 226 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 264
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 226 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 264
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 226 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 264
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 228 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 266
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 227 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 265
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 227 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 265
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 73.2 bits (178), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWAFATNF PG Sbjct: 227 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 265
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 72.8 bits (177), Expect = 2e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 239 GFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 277
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 72.8 bits (177), Expect = 2e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 239 GFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 277
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 72.8 bits (177), Expect = 2e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 235 GFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 273
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 72.8 bits (177), Expect = 2e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DHIADPVN NAWA+ATNF PG Sbjct: 226 GFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 264
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 72.0 bits (175), Expect = 4e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 222 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 260
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 72.0 bits (175), Expect = 4e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 167 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 205
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 72.0 bits (175), Expect = 4e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 226 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 72.0 bits (175), Expect = 4e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 226 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 72.0 bits (175), Expect = 4e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 226 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 72.0 bits (175), Expect = 4e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 216 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 254
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 72.0 bits (175), Expect = 4e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 228 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 266
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 72.0 bits (175), Expect = 4e-13 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+ATNF PG Sbjct: 228 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 266
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 71.6 bits (174), Expect = 5e-13 Identities = 32/39 (82%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DHIADPV NAWAFATNF PG Sbjct: 225 GFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPG 263
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 71.2 bits (173), Expect = 7e-13 Identities = 30/39 (76%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ DPVN NAWA+ATNF PG Sbjct: 225 GFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPG 263
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 70.9 bits (172), Expect = 9e-13 Identities = 30/39 (76%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAW++ATNF PG Sbjct: 77 GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 115
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 70.9 bits (172), Expect = 9e-13 Identities = 30/39 (76%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAW++ATNF PG Sbjct: 230 GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 268
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/39 (79%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPV NAWAFATNF PG Sbjct: 226 GFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPG 264
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/39 (79%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPV NAWAFATNF PG Sbjct: 226 GFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPG 264
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/39 (79%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAW FATNF PG Sbjct: 228 GFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPG 266
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/39 (79%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP+ NL DH+ADPVN NAWA+ATNF PG Sbjct: 228 GFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPG 266
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 70.9 bits (172), Expect = 9e-13 Identities = 30/39 (76%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAW++ATNF PG Sbjct: 228 GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 266
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 70.9 bits (172), Expect = 9e-13 Identities = 30/39 (76%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAW++ATNF PG Sbjct: 228 GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 266
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 70.9 bits (172), Expect = 9e-13 Identities = 30/39 (76%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAW++ATNF PG Sbjct: 228 GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 266
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 70.9 bits (172), Expect = 9e-13 Identities = 30/39 (76%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAW++ATNF PG Sbjct: 227 GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 265
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 70.5 bits (171), Expect = 1e-12 Identities = 30/39 (76%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+A+PVN NAWA+ATNF PG Sbjct: 206 GFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPG 244
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 70.5 bits (171), Expect = 1e-12 Identities = 31/39 (79%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DHIADPV NAWA+ATNF PG Sbjct: 198 GFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPG 236
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 70.1 bits (170), Expect = 2e-12 Identities = 29/39 (74%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQA+VTGKGP++NL DH+ADPVN NAW++ATNF PG Sbjct: 227 GFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPG 265
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/39 (76%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPV NAWA+ATNF PG Sbjct: 224 GFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 262
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 69.7 bits (169), Expect = 2e-12 Identities = 29/39 (74%), Positives = 35/39 (89%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH++DPVN NAW++ATNF PG Sbjct: 229 GFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPG 267
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/39 (76%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPV NAWA+ATNF PG Sbjct: 226 GFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 264
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/39 (76%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPV NAWA+ATNF PG Sbjct: 111 GFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPG 149
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/39 (76%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+A PVN NAWA+ATNF PG Sbjct: 224 GFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPG 262
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/39 (76%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPV NAWA+ATNF PG Sbjct: 226 GFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPG 264
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/39 (76%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPV NAWA+ATNF PG Sbjct: 227 GFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPG 265
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 68.6 bits (166), Expect = 4e-12 Identities = 29/39 (74%), Positives = 34/39 (87%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF V AIVTGKGP++NL DH+ADPVN NAW++ATNF PG Sbjct: 189 GFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 227
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 68.2 bits (165), Expect = 6e-12 Identities = 30/39 (76%), Positives = 33/39 (84%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DHI DPV NAWA+ATNF PG Sbjct: 226 GFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPG 264
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 67.8 bits (164), Expect = 8e-12 Identities = 29/39 (74%), Positives = 33/39 (84%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADP NAWA+ATNF PG Sbjct: 226 GFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPG 264
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 67.8 bits (164), Expect = 8e-12 Identities = 30/39 (76%), Positives = 33/39 (84%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP+++L DHIADPVN NAW ATNF PG Sbjct: 227 GFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPG 265
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 67.4 bits (163), Expect = 1e-11 Identities = 29/39 (74%), Positives = 33/39 (84%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGP++NL DH+ADPVN NAWA+AT PG Sbjct: 217 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPG 255
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 66.6 bits (161), Expect = 2e-11 Identities = 30/40 (75%), Positives = 33/40 (82%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPGS 65 GF VQAIVTGKGP++NL DH+ DPV NAW FAT FAPGS Sbjct: 229 GFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPGS 268
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 2e-11 Identities = 27/38 (71%), Positives = 33/38 (86%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAP 71 GF +QAIVTGKGP++NL DH+ DPVN NAW++ATNF P Sbjct: 228 GFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVP 265
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 60.8 bits (146), Expect = 9e-10 Identities = 27/40 (67%), Positives = 32/40 (80%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPGS 65 GF VQAIVTGKGP++NL DH+ADPV NAWA+A PG+ Sbjct: 229 GFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPGT 268
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 60.8 bits (146), Expect = 9e-10 Identities = 26/40 (65%), Positives = 32/40 (80%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPGS 65 GF VQAIVTGKGP++NL DH+ +PV NAW +AT F PG+ Sbjct: 226 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGA 265
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 58.9 bits (141), Expect = 4e-09 Identities = 27/40 (67%), Positives = 32/40 (80%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPGS 65 GF VQAIVTGKGPV+NL DH+A+P NA+AFAT F P + Sbjct: 214 GFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTPSA 253
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 58.5 bits (140), Expect = 5e-09 Identities = 25/38 (65%), Positives = 31/38 (81%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAP 71 GF VQAIVTGKGP++NL DH+A+P NA+A+AT F P Sbjct: 235 GFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 57.8 bits (138), Expect = 8e-09 Identities = 27/39 (69%), Positives = 30/39 (76%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPG 68 GF VQAIVTGKGPV+NL DH+ADP A+A AT F PG Sbjct: 214 GFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 57.8 bits (138), Expect = 8e-09 Identities = 26/40 (65%), Positives = 31/40 (77%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPGS 65 GF VQAIVTGKGP++NL DH+ADP NA+A AT F P + Sbjct: 217 GFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTPSA 256
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 44.3 bits (103), Expect = 9e-05 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNIN 101 G+ +QA+VTG GP +NL DH+ADPVN N Sbjct: 238 GYFIQALVTGVGPYQNLLDHLADPVNNN 265
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/40 (52%), Positives = 27/40 (67%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFAPGS 65 GF VQAIV+ K ++NL DH+ VN NA + TNF PG+ Sbjct: 229 GFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPGN 268
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNIN 101 GF +QA VTG+GPV+NL H++DP N Sbjct: 238 GFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINA-WAFATNFAP 71 GF QAIVTG+GPV+N H+ DP N A T FAP Sbjct: 83 GFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 36.6 bits (83), Expect = 0.019 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVN 107 GF VQA TGKGP+ N H++DP++ Sbjct: 252 GFAVQAAATGKGPLNNWATHLSDPLH 277
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 36.6 bits (83), Expect = 0.019 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVN 107 GF VQA TGKGP+ N H++DP++ Sbjct: 255 GFAVQAAATGKGPLNNWATHLSDPLH 280
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 35.8 bits (81), Expect = 0.032 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADP 113 GF VQ VTGKGP +NL H++DP Sbjct: 218 GFVVQHNVTGKGPFENLLQHLSDP 241
>TRPC2_MOUSE (Q9R244) Short transient receptor potential channel 2 (TrpC2)| (mTrp2) Length = 1172 Score = 32.0 bits (71), Expect = 0.46 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +3 Query: 39 RRMAAKHIXLPGAKLVAKAHALMFTGSAMWSKRFLTGPFPVTMACTK 179 RR+ A+ G K+ K+ +L F S++ RF G P+T+AC K Sbjct: 395 RRLLARLEREKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQK 441
>TRPC2_RAT (Q9R283) Short transient receptor potential channel 2 (TrpC2)| (rTRP2) Length = 885 Score = 32.0 bits (71), Expect = 0.46 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +3 Query: 39 RRMAAKHIXLPGAKLVAKAHALMFTGSAMWSKRFLTGPFPVTMACTK 179 RR+ A+ G K+ K+ +L F S++ RF G P+T+AC K Sbjct: 111 RRLLARLEREKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQK 157
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 31.2 bits (69), Expect = 0.79 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWAFATNFA 74 G Q + TG+ P+ NL H+A+P+ N TN A Sbjct: 327 GLTAQYLATGESPLANLSAHLANPIGAN---ITTNLA 360
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWA 92 G Q I TG GP+ NL H+ADP + +A Sbjct: 235 GAWFQHIYTGTGPIDNLFAHLADPGHATIFA 265
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWA 92 G Q I TG GP+ NL H+ADP + +A Sbjct: 235 GAWFQHIYTGTGPIDNLFAHLADPGHATIFA 265
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 30.0 bits (66), Expect = 1.8 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNIN 101 G Q + TG+ P+ NL H A+PV N Sbjct: 298 GLTFQYLATGESPLANLAAHFANPVGAN 325 Score = 30.0 bits (66), Expect = 1.8 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 Query: 184 GFXVQAIVTGKGPVKNLXDHIADPVNINAWA 92 G VQ VT +GPV NL +H+ P+ N A Sbjct: 110 GLEVQNHVTAQGPVANLIEHLRHPLAANIGA 140
>SIRB2_ECOLI (Q46755) Protein sirB2| Length = 130 Score = 29.6 bits (65), Expect = 2.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 60 IXLPGAKLVAKAHALMFTGSAMWSKRFLTG 149 + L G L+AKAH L F+G A W L G Sbjct: 52 LLLSGIALMAKAHILPFSGQAQWLTEKLFG 81
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 28.5 bits (62), Expect = 5.1 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = -2 Query: 184 GFXVQ-AIVTGKGPVKNLXDHIADPVNIN 101 GF VQ + G GP++NL H+ADP + N Sbjct: 205 GFCVQQSAYLGTGPLENLATHLADPWHNN 233 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,092,103 Number of Sequences: 219361 Number of extensions: 411643 Number of successful extensions: 1106 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 1098 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1105 length of database: 80,573,946 effective HSP length: 37 effective length of database: 72,457,589 effective search space used: 1738982136 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
