Clone Information

BLAST Search Result

Clone Name	rbah63o13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	197	1e-50
2	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	196	2e-50
3	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	193	2e-49
4	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	190	2e-48
5	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	153	3e-37
6	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	106	4e-23
7	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	94	2e-19
8	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	94	2e-19
9	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	89	8e-18
10	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	89	8e-18
11	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	86	4e-17
12	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	83	5e-16
13	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	78	1e-14
14	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	77	2e-14
15	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	77	3e-14
16	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	77	3e-14
17	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	77	3e-14
18	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	77	3e-14
19	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	76	4e-14
20	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	76	4e-14
21	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	76	4e-14
22	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	76	4e-14
23	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	75	7e-14
24	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	75	7e-14
25	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	75	1e-13
26	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	74	2e-13
27	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	72	6e-13
28	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	72	8e-13
29	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	69	9e-12
30	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	68	1e-11
31	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	67	3e-11
32	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	65	1e-10
33	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	62	6e-10
34	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	62	6e-10
35	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	57	2e-08
36	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	55	1e-07
37	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	54	3e-07
38	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	53	5e-07
39	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	52	9e-07
40	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	52	9e-07
41	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	52	9e-07
42	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	52	9e-07
43	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	50	3e-06
44	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	50	3e-06
45	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	50	3e-06
46	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	48	2e-05
47	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	46	5e-05
48	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	45	8e-05
49	TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-...	33	0.54
50	TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-...	32	0.71
51	GLND_METCA (Q60BB2) [Protein-PII] uridylyltransferase (EC 2.7.7....	31	2.1
52	GLND_PSYAR (Q4FUP5) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	4.6
53	CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha	29	6.0
54	CR023_HUMAN (Q8NB54) Protein C18orf23	29	7.8
55	AROA_LISIN (Q92A85) 3-phosphoshikimate 1-carboxyvinyltransferase...	29	7.8
56	YUBA_BACSU (O32086) Hypothetical UPF0118 protein yubA	29	7.8
57	TSG6_HUMAN (P98066) Tumor necrosis factor-inducible protein TSG-...	29	7.8
58	DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1...	29	7.8

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  197 bits (502), Expect = 1e-50
 Identities = 100/112 (89%), Positives = 105/112 (93%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DFMQ SRVARQMVERFGFSKKIGQVAIG  GGNPFLGQQMSSQKDYSMATADIVD EVRE
Sbjct: 595 DFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRE 654

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA 156
           LV+ AY RATQIINTHIDILH+LA LLIEKETVDGEEFMSLFIDG+AEL+V+
Sbjct: 655 LVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYVS 706

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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  196 bits (499), Expect = 2e-50
 Identities = 97/112 (86%), Positives = 105/112 (93%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DFMQ SRVARQM+ERFGFSKKIGQVA+G  GGNPF+GQQMSSQKDYSMATADIVDAEVRE
Sbjct: 605 DFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRE 664

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA 156
           LVE AY RAT+II THIDILH+LA LLIEKETVDGEEFMSLFIDGQAEL+++
Sbjct: 665 LVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYIS 716

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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  193 bits (491), Expect = 2e-49
 Identities = 97/115 (84%), Positives = 106/115 (92%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DFMQ SRVARQMVER GFSKKIGQVAIG  GGNPFLGQQMS+QKDYSMATAD+VDAEVRE
Sbjct: 596 DFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRE 655

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA*VA 147
           LVE AY RAT+II THIDILH+LA LLIEKETVDGEEFMSLFIDG+AEL+++ V+
Sbjct: 656 LVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYISWVS 710

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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  190 bits (483), Expect = 2e-48
 Identities = 96/112 (85%), Positives = 103/112 (91%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DFMQ SRVARQMVERFGFSKKIGQVA+G +GGNPFLGQ MSSQKDYSMATAD+VDAEVRE
Sbjct: 593 DFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRE 652

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA 156
           LVE AY RA +II T IDILH+LA LLIEKETVDGEEFMSLFIDGQAEL+V+
Sbjct: 653 LVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVS 704

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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  153 bits (386), Expect = 3e-37
 Identities = 77/90 (85%), Positives = 81/90 (90%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DFMQ SRVARQMVER GFSKKIGQVAIG  GGNPFLGQQMS+QKDYSMATAD+VD+EVRE
Sbjct: 573 DFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDSEVRE 632

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEK 222
           LVE AY RA QII THIDILH+LA LLIEK
Sbjct: 633 LVEKAYERAKQIITTHIDILHKLAQLLIEK 662

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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  106 bits (264), Expect = 4e-23
 Identities = 53/109 (48%), Positives = 74/109 (67%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  Q +RVARQMV RFG S ++G VA+G  GG  FLG+ ++S +D+S  TA  +D EV +
Sbjct: 504 DLQQVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRDFSDETAAAIDEEVSQ 563

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAEL 165
           LV+ AY RA Q++  +  IL +LA +L+EKETVD EE  +L  +  A+L
Sbjct: 564 LVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLANNNAKL 612

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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 47/104 (45%), Positives = 66/104 (63%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  Q +++AR MV  FG S K+G V  GS  G+PFLG+ M +Q DYS   A  +D EVR+
Sbjct: 501 DIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRK 560

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 180
           L+E A++ A +I+  + D+L  LA  L+EKET+   E  S+F D
Sbjct: 561 LIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604

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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 47/104 (45%), Positives = 66/104 (63%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  Q +++AR MV  FG S K+G V  GS  G+PFLG+ M +Q DYS   A  +D EVR+
Sbjct: 501 DIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRK 560

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 180
           L+E A++ A +I+  + D+L  LA  L+EKET+   E  S+F D
Sbjct: 561 LIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604

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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 88.6 bits (218), Expect = 8e-18
 Identities = 44/102 (43%), Positives = 64/102 (62%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + +++AR MV  FG S K+G V  GS  G+PFLG+ M +Q DYS   A  +D EVR+
Sbjct: 501 DIEKATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQADYSHEVARDIDDEVRK 560

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLF 186
           L+E A++ A +I+  + D+L  LA  L+EKET+   E   +F
Sbjct: 561 LIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIF 602

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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 88.6 bits (218), Expect = 8e-18
 Identities = 44/101 (43%), Positives = 66/101 (65%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  Q + +ARQMV RFG S  +G +++ SSGG  FLG  + ++ +YS   A  +DA+VR+
Sbjct: 511 DLQQVTEMARQMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQ 569

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           L E  +  A +I+    +++ RL +LLIEKET+DGEEF  +
Sbjct: 570 LAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQI 610

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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 44/98 (44%), Positives = 63/98 (64%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  Q + +ARQMV RFG SK IG +++ S G +PFLG+ M    +YS   A  +D +VRE
Sbjct: 512 DLQQVTSMARQMVTRFGMSK-IGPLSLESQGSDPFLGRGMGGGSEYSDEVATNIDKQVRE 570

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 198
           +V   Y  A +I+  +  ++ RL +LLIEKET++G EF
Sbjct: 571 IVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEF 608

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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 42/104 (40%), Positives = 64/104 (61%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  Q + +ARQMV RFG S  IG +++ S   +PFLG+ M S   YS   A  +D +VR 
Sbjct: 512 DLQQVTSMARQMVTRFGMSN-IGPLSLESQNSDPFLGRTMGSSSQYSEDIASRIDMQVRA 570

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 180
           +++  ++   QII  +  ++ +L +LLIEKET+DG+EF  +  D
Sbjct: 571 IIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGD 614

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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 39/107 (36%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVA-IGSSGGNPFLGQQMSSQKDYSMATADIVDAEVR 315
           DF + + +AR+MV  +G S+K+G +  I  SGG  FLG+ + ++++YS A A  +D EV+
Sbjct: 504 DFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAHEIDLEVQ 563

Query: 314 ELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 174
            +++  Y+R  QI+  + D L  +A  L++ ET+D E+  SL  +G+
Sbjct: 564 RIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHEGK 610

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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 38/94 (40%), Positives = 59/94 (62%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV ++GFS K+G +      G  FLG+ ++  K  S  TA I+D EV+ 
Sbjct: 492 DIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDEEVKL 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVD 210
           L+E  Y+RA +I+N ++DILH + + LI+ ET+D
Sbjct: 552 LIEVNYNRARKILNENLDILHAMKDALIKYETID 585

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 38/101 (37%), Positives = 61/101 (60%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA I+D EV+ 
Sbjct: 492 DIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKA 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           L+E  Y+RA QI+  ++DILH + + L++ ET+D  +   L
Sbjct: 552 LIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 38/101 (37%), Positives = 61/101 (60%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA I+D EV+ 
Sbjct: 492 DIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKA 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           L+E  Y+RA QI+  ++DILH + + L++ ET+D  +   L
Sbjct: 552 LIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSS-GGNPFLGQQMSSQKDYSMATADIVDAEVR 315
           DF + + +AR+MV  FG S+K+G +  G S GG  FLG+  +++++YS   A  +D E++
Sbjct: 499 DFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQ 558

Query: 314 ELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDG 177
            +++  Y RA QI+  + D L  +A  L++ ET+D E+   L   G
Sbjct: 559 RIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHG 604

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 39/94 (41%), Positives = 58/94 (61%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +A+ MV ++GFS+K+G +      G  FLG+ ++  K  S  TA I+D EV+ 
Sbjct: 492 DIKIATSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKL 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVD 210
           L+E  YSRA  I+N +IDILH +   LI+ ET+D
Sbjct: 552 LIEINYSRARNILNENIDILHAMKEALIKYETID 585

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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 39/101 (38%), Positives = 61/101 (60%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV ++GFSKK+G +      G  FLG+ ++  K  S  TA I+D EV+ 
Sbjct: 492 DIKVATNLARNMVTQWGFSKKLGPLLYSEEEGEIFLGRTVTKSKHMSDETARIIDEEVKL 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           LVE  Y+RA +I+  ++DILH + + LI+ ET++  +   L
Sbjct: 552 LVEKNYNRAKKILEENLDILHAMKDALIKYETINSRQIDDL 592

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 37/101 (36%), Positives = 61/101 (60%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA I+D EV+ 
Sbjct: 492 DIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKA 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           L+E  Y+RA Q++  ++DILH + + L++ ET+D  +   L
Sbjct: 552 LIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 37/101 (36%), Positives = 61/101 (60%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA I+D EV+ 
Sbjct: 492 DIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKA 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           L+E  Y+RA Q++  ++DILH + + L++ ET+D  +   L
Sbjct: 552 LIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 37/101 (36%), Positives = 61/101 (60%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA I+D EV+ 
Sbjct: 492 DIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKA 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           L+E  Y+RA Q++  ++DILH + + L++ ET+D  +   L
Sbjct: 552 LIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 37/101 (36%), Positives = 60/101 (59%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV ++GFS+K+G +      G  FLG+ M+  K  S  TA  +D EVR 
Sbjct: 237 DIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDETAHSIDEEVRA 296

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           +V   Y+RA +I+  ++DILH + + L++ ET++ E+   L
Sbjct: 297 IVNRNYARAREILIDNMDILHAMKDALVKYETIEEEQIKQL 337

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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 37/101 (36%), Positives = 60/101 (59%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV ++GFS+K+G +      G  FLG+ M+  K  S  TA  +D EVR 
Sbjct: 491 DIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDETAHSIDEEVRA 550

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           +V   Y+RA +I+  ++DILH + + L++ ET++ E+   L
Sbjct: 551 IVNRNYARAREILIDNMDILHAMKDALVKYETIEEEQIKQL 591

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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 40/106 (37%), Positives = 61/106 (57%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + + +AR MV  +G SKK+G V+        F+G+     K YS ATA ++D EVR 
Sbjct: 532 DIEKATHIARSMVTEYGMSKKLGMVSY-EGDHQVFIGRDYGQTKTYSEATAVMIDDEVRR 590

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 174
           ++  AY RA + I TH +    +A  L++ ET+D ++ MSLF  G+
Sbjct: 591 ILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSLFKTGK 636

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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 43/107 (40%), Positives = 66/107 (61%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV + G S  IG +  GSSG + + G+Q +++   S ATA+++DAEV+ 
Sbjct: 495 DIKGATNIARAMVTKAGLSDLIGPIFHGSSGDDMY-GRQPNNET--SEATAELIDAEVKR 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 171
           ++   Y  A  I+  HID LH LAN LIE ET+ G++  +L + G+A
Sbjct: 552 IITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGRA 597

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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 72.4 bits (176), Expect = 6e-13
 Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAI-GSSGGNPFLGQQMSSQKDYSMATADIVDAEVR 315
           D  Q + +ARQMV RFG S  IG +A+   S G  FLG  M+S  +Y+   AD +D EVR
Sbjct: 525 DLQQVTNLARQMVTRFGMSN-IGPLALEDESTGQVFLGGNMASGSEYAENIADRIDDEVR 583

Query: 314 ELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           +++   Y +A +I+  +  ++  +   L++KET+DG+EF  L
Sbjct: 584 KIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFREL 625

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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 42/107 (39%), Positives = 65/107 (60%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    + +AR MV + G S  IG +  GS+  + + G+Q S++   S ATA+++DAEV+ 
Sbjct: 495 DIKGATNIARAMVTKAGLSDLIGPIFHGSNSDDMY-GRQSSNE--ISEATAELIDAEVKR 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 171
           ++   Y  A  I+  HID LH LAN LIE ET+ G++  +L + G+A
Sbjct: 552 IITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGRA 597

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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 34/101 (33%), Positives = 61/101 (60%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  Q + +ARQMV +FG SK +G + + +S    F+G+ +  + + S      VD EVR 
Sbjct: 510 DIKQVTFMARQMVTKFGMSK-VGPICLENSSSEVFIGRDLMGRHELSEEMVAKVDLEVRS 568

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           +++  Y +A  I++ +  ++ R+ N L+EKET++ +EFM +
Sbjct: 569 ILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRI 609

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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSS-QKDYSMATADIVDAEVR 315
           D  + + +A QMV  +G SK +G +A      N FLGQ M + ++  S  TA  +D EV+
Sbjct: 515 DLQRATDLAEQMVTTYGMSKVLGPLAYDKGQQNNFLGQGMGNPRRMVSDDTAKEIDLEVK 574

Query: 314 ELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 171
           E+VE  +++A  I+  + D+L  +A  ++EKE ++GEE   L    QA
Sbjct: 575 EIVEQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHLLGQVQA 622

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>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 34/101 (33%), Positives = 57/101 (56%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  Q + +ARQMV RFG S  +G + + +     FLG+ M    + S      +DA+VR 
Sbjct: 493 DLQQVTNLARQMVTRFGMSS-LGPLCLETGNEEIFLGRDMRLMPEVSEEVIAQIDAQVRG 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           ++E  Y +  +++  +  ++ R+   L+EKET+DG+EF  L
Sbjct: 552 MIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKEFRQL 592

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>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 35/101 (34%), Positives = 58/101 (57%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + + +ARQMV + G S  +G VA+   G   F G     + +YS   A  +D E++ 
Sbjct: 550 DIEKITYLARQMVTKLGMSS-LGLVALEEEGDRNFSGGDWGKRSEYSEDIAARIDREIQA 608

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           +V  A+ RAT+II  + +++  L + LI++ET++GE F  L
Sbjct: 609 IVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQL 649

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>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 38/106 (35%), Positives = 61/106 (57%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DF Q +++AR MV  +G S+K+G V     G +  LG Q S QK  S  TA  +D EVR 
Sbjct: 525 DFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGAQ-SPQKSISEQTAYEIDEEVRS 581

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 174
           L+  A ++A +II ++ +    +A  L++ ET+D  +  +L+  G+
Sbjct: 582 LLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGK 627

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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 38/106 (35%), Positives = 61/106 (57%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DF Q +++AR MV  +G S+K+G V     G +  LG Q S QK  S  TA  +D EVR 
Sbjct: 525 DFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGAQ-SPQKSISEQTAYEIDEEVRS 581

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 174
           L+  A ++A +II ++ +    +A  L++ ET+D  +  +L+  G+
Sbjct: 582 LLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGK 627

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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 34/102 (33%), Positives = 56/102 (54%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + + +A +MV  +G S K+G +AI     NPFLG  M++  D S      +D EV+ 
Sbjct: 496 DLQRATDLAYRMVSMWGMSDKVGPIAIRRVA-NPFLGG-MTTAVDTSPDLLREIDEEVKR 553

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLF 186
           ++   Y +A  I+  + + L  +   L+EKET+  EEF+ +F
Sbjct: 554 IITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVF 595

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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 32/101 (31%), Positives = 58/101 (57%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + ++ A   + +FG S+K+GQV+       P  G+ M  +K YS ATA ++D EVR 
Sbjct: 515 DLRKVTQSAYAQIVQFGMSEKLGQVSFDF----PRQGETMV-EKPYSEATAQLIDEEVRC 569

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           LV +AY+R  +++    + + ++   L+EKE ++  + + L
Sbjct: 570 LVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIEL 610

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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 32/101 (31%), Positives = 55/101 (54%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + ++ A   + +FG ++K+GQ++       P  G  M  +K YS ATA ++D EVR 
Sbjct: 649 DLRKVTQSAYAQIVQFGMNEKVGQISFDL----PRQGD-MVLEKPYSEATARLIDDEVRI 703

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           L+  AY R   ++      + ++A LL+EKE +D  + + L
Sbjct: 704 LINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVEL 744

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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 32/101 (31%), Positives = 55/101 (54%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + ++ A   + +FG ++K+GQ++       P  G  M  +K YS ATA ++D EVR 
Sbjct: 648 DLRKVTQSAYAQIVQFGMNEKVGQISFDL----PRQGD-MVLEKPYSEATARMIDDEVRI 702

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           L+  AY R   ++      + ++A LL+EKE +D  + + L
Sbjct: 703 LISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQL 743

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 29/101 (28%), Positives = 53/101 (52%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + +R+A  MV++FG +  IG ++   +      G     ++ +S     ++D E R 
Sbjct: 650 DLRKVTRIAYSMVKQFGMAPGIGPISFPEAQE----GLMGIGRRPFSQGLQQMMDHEARL 705

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           LV  AY    +++  ++D L  LAN L+EKE ++ E+  +L
Sbjct: 706 LVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEAL 746

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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 30/106 (28%), Positives = 54/106 (50%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DF   +++A++MV +FG S+K+G +    +G               S  T   ++ E+R 
Sbjct: 677 DFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQSAIEQEIRI 723

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 174
           L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 724 LLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 768

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>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 30/106 (28%), Positives = 54/106 (50%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DF   +++A++MV +FG S+K+G +    +G               S  T   ++ E+R 
Sbjct: 619 DFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQSAIEQEIRI 665

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 174
           L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 666 LLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710

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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 30/106 (28%), Positives = 54/106 (50%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DF   +++A++MV +FG S+K+G +    +G               S  T   ++ E+R 
Sbjct: 619 DFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQSAIEQEIRI 665

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 174
           L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 666 LLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710

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>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 29/101 (28%), Positives = 51/101 (50%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DF + + +A  MV   G S KIG V       N          K +S  T DI+D+EV  
Sbjct: 689 DFKKVTSMATAMVTELGMSDKIGWV-------NYQKRDDSDLTKPFSDETGDIIDSEVYR 741

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           +V+  + R T+++    + + ++A +L++KE +  E+ + L
Sbjct: 742 IVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDL 782

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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 26/98 (26%), Positives = 50/98 (51%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + + + R+M+  +G S+K   VA+   G       Q++  ++YS  T   VD EV  
Sbjct: 479 DISRATDIVRKMITDYGMSEKFQNVALTRRGTGYLAEPQLA--REYSECTQQYVDEEVAR 536

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 198
           ++   Y     ++    ++L  +A  L+E+ET++ +EF
Sbjct: 537 VLAERYRAVVALLTEKKELLEYIATRLLERETIERDEF 574

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>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 27/97 (27%), Positives = 53/97 (54%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D  + +++AR+MV  +G S  +G +       NPFLG+  S +  +    A  +D E+R+
Sbjct: 552 DISRATKIARKMVTEWGMSA-LGPIKYEEDTENPFLGRDYS-KGTFGSKMAHEIDLEIRK 609

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 201
           ++  +   A + I  ++++L  + + L+E ET+  EE
Sbjct: 610 IISASEEIAIKAIEQNLELLELIKDSLLENETIVAEE 646

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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQ----KDYSMATADIVDA 324
           D  + +++A QMV+ FG S K+G           F  Q   S      D +  TA+++DA
Sbjct: 540 DLSKATQLAVQMVKVFGMSDKVGL--------RDFTAQDNESALVKVSDLAPQTAELIDA 591

Query: 323 EVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 174
           E+  +++ +Y RA  I+ T       LA  L+E ET+  +E +   I GQ
Sbjct: 592 EINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADE-VKRVISGQ 640

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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 31/97 (31%), Positives = 46/97 (47%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           D    +  AR MV ++G S  +G V +  +             + +S    DI D EV E
Sbjct: 618 DLQSATGTARAMVTQYGMSDDVGPVNLSENW------------ESWSNKIRDIADNEVIE 665

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 201
           L++ +  RA +++      LHRLA  LIE ET+D  E
Sbjct: 666 LLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAHE 702

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>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 28/101 (27%), Positives = 51/101 (50%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DF + + +A+ MV+RFGFS KIG   I             +  +    AT D++D EV +
Sbjct: 503 DFRKATILAQNMVKRFGFSSKIGPRVIPD-----------TQDEQLGEATRDLIDKEVDQ 551

Query: 311 LVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 189
           L+  + +R   ++++       LA  L+  ET+  +E +++
Sbjct: 552 LLNDSLTRVRTLLSSQSKQHKLLAEALLHFETLTKDEVLAV 592

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>TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein)
          Length = 275

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +1

Query: 28  VHFYKELYKHVCKNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 177
           V  ++E +    KN IF  S+W  QA   Y+R    G    TYA   + C
Sbjct: 9   VLLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVC 58

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>TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein) (Hyaluronate-binding
           protein PS4)
          Length = 276

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 64  KNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 177
           KN IF  S+W  QA   Y+R   +G    TYA   + C
Sbjct: 21  KNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVC 58

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>GLND_METCA (Q60BB2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 877

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 29  YIFTRNYTNMFAKTTFLLDQCGSYKLDPRITA 124
           +I+ RN   +FA+TT +LDQ G   LD +I A
Sbjct: 698 FIYERNRDFLFAQTTAVLDQLGLTVLDAKIIA 729

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>GLND_PSYAR (Q4FUP5) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 915

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 11  IDALVXYIFTRNYTNMFAKTTFLLDQCGSYKLDPRI 118
           +DA+  +++T++  N+FA T  + DQ     LD RI
Sbjct: 728 LDAVQVFVYTQDQVNLFAVTMAVFDQMNLDVLDARI 763

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>CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha|
          Length = 909

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
 Frame = -3

Query: 344 TADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAEL 165
           +AD+V   + E V  + +R T++ N  IDILH+    L+    +          D   + 
Sbjct: 208 SADVVHYPLPENVRGSRARLTELDNVEIDILHQRGAFLLPPRAL---------CDELIDA 258

Query: 164 FVA*VAPSCPVC----FRRLYEGPACRNHIDLVKMLFLQTCLYSSL*KC 30
           + + V P  PV     F R Y  P      +   +L LQ+ L +    C
Sbjct: 259 YFSWVHPIVPVINRTRFMRQYRDPK-----NPPSLLLLQSVLLAGTRAC 302

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>CR023_HUMAN (Q8NB54) Protein C18orf23|
          Length = 160

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -1

Query: 166 CLSHKSPRHALYVFGGYTRVQLVGTTLI**KCCFCKHVCIVPCK 35
           C +H +PR+ L +   YT  + +G  +     C C +VC+  C+
Sbjct: 33  CPAHPAPRNCLCMTVAYTGSRCLGACVC---VCVCLYVCVHVCE 73

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>AROA_LISIN (Q92A85) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 428

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 458 MVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 330
           M+ +FG   ++  + I   GG  F+GQ+M+   D S A   IV
Sbjct: 199 MIRQFGGEIEMDGLTIRVKGGQKFIGQEMTVPGDVSSAAFFIV 241

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>YUBA_BACSU (O32086) Hypothetical UPF0118 protein yubA|
          Length = 388

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -3

Query: 491 DFMQXSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAEVRE 312
           DF++  R+ R       +   IG + I      PFL +Q+ S  D      D+V+ + ++
Sbjct: 73  DFLERRRIRRIYSILLLYLLVIGLITITIVSIIPFLKEQIMSLIDNIPRYVDVVENQTKQ 132

Query: 311 LVETAY-SRATQIINTHIDIL 252
           L+ + + ++A Q +N +I  L
Sbjct: 133 LIGSNFVNQAQQTMNINISDL 153

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>TSG6_HUMAN (P98066) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein) (Hyaluronate-binding
           protein)
          Length = 277

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 64  KNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 177
           K+ IF  S+W  +A   Y+R   +G    TYA   + C
Sbjct: 21  KDGIFHNSIWLERAAGVYHREARSGKYKLTYAEAKAVC 58

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>DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 480

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +1

Query: 97  LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 264
           L+ GP  N+     H  A YA ++  CP  + L+N      SF+       L +    +M
Sbjct: 255 LEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAM 314

Query: 265 WV 270
           WV
Sbjct: 315 WV 316


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,682,578
Number of Sequences: 219361
Number of extensions: 1012798
Number of successful extensions: 3255
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 3166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3236
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result