ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63o02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADH2_ENTHI (Q24803) Aldehyde-alcohol dehydrogenase 2 [Includes: ... 32 1.2
2ADHE_ECOLI (P0A9Q7) Aldehyde-alcohol dehydrogenase [Includes: Al... 30 3.4
3ADHE_ECO57 (P0A9Q8) Aldehyde-alcohol dehydrogenase [Includes: Al... 30 3.4
4UPPP1_BURS3 (Q39IU8) Undecaprenyl-diphosphatase 1 (EC 3.6.1.27) ... 29 5.8
5UPPP_NITEU (Q82Y49) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Un... 29 7.6
6KMHA_DICDI (P42527) Myosin heavy chain kinase A (EC 2.7.11.7) (M... 29 7.6
7PSAA_EUGGR (P19430) Photosystem I P700 chlorophyll a apoprotein ... 29 7.6

>ADH2_ENTHI (Q24803) Aldehyde-alcohol dehydrogenase 2 [Includes: Alcohol|
           dehydrogenase (EC 1.1.1.1) (ADH); Acetaldehyde
           dehydrogenase (EC 1.2.1.10) (ACDH)]
          Length = 870

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 231 GTVEIKRLIGLEAGLTPVTSKTDTPITKKLLQAGT 335
           G  EI   +G+  G+TPVT+ T T I K L+   T
Sbjct: 102 GITEIAEPVGVVCGVTPVTNPTSTAIFKSLISIKT 136



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>ADHE_ECOLI (P0A9Q7) Aldehyde-alcohol dehydrogenase [Includes: Alcohol|
           dehydrogenase (EC 1.1.1.1) (ADH); Acetaldehyde
           dehydrogenase [acetylating] (EC 1.2.1.10) (ACDH);
           Pyruvate-formate-lyase deactivase (PFL deactivase)]
          Length = 890

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 231 GTVEIKRLIGLEAGLTPVTSKTDTPITKKLLQAGT 335
           GT+ I   IG+  G+ P T+ T T I K L+   T
Sbjct: 95  GTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKT 129



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>ADHE_ECO57 (P0A9Q8) Aldehyde-alcohol dehydrogenase [Includes: Alcohol|
           dehydrogenase (EC 1.1.1.1) (ADH); Acetaldehyde
           dehydrogenase [acetylating] (EC 1.2.1.10) (ACDH);
           Pyruvate-formate-lyase deactivase (PFL deactivase)]
          Length = 890

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 231 GTVEIKRLIGLEAGLTPVTSKTDTPITKKLLQAGT 335
           GT+ I   IG+  G+ P T+ T T I K L+   T
Sbjct: 95  GTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKT 129



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>UPPP1_BURS3 (Q39IU8) Undecaprenyl-diphosphatase 1 (EC 3.6.1.27) (Undecaprenyl|
           pyrophosphate phosphatase 1) (Bacitracin resistance
           protein 1)
          Length = 276

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
 Frame = -2

Query: 289 LVTGV--RPASR--PINLLISTVPFCVLNVV*VSQFHSQLALPAPVAFSLLL 146
           +V+G+  RP +R   +N++I+T+P   L ++   +  + L  P PVAF+L++
Sbjct: 70  IVSGLPSRPDARRFTLNVVIATIPAIALGLLFEKKIKAVLFSPVPVAFALVV 121



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>UPPP_NITEU (Q82Y49) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl|
           pyrophosphate phosphatase) (Bacitracin resistance
           protein)
          Length = 273

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -2

Query: 301 VSVLLVTGVRPASR-PINLLISTVPFCVLNVV*VSQFHSQLALPAPVAFSLL 149
           V+++   G R A+R  INL I+ +P  +L ++ +      L  P PVA +L+
Sbjct: 68  VNIIRNLGTRQANRFVINLFIAFLPAAILGLLFIKTIKHYLFHPMPVAIALV 119



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>KMHA_DICDI (P42527) Myosin heavy chain kinase A (EC 2.7.11.7) (MHCK A)|
          Length = 1146

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +3

Query: 225 QKGTVEIKRLIGLEAGLTPVTSKTDTPITKK 317
           Q+G  +++R++  EA ++P++S   +PIT K
Sbjct: 485 QEGNEQVERVLREEASISPISSVPKSPITTK 515



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>PSAA_EUGGR (P19430) Photosystem I P700 chlorophyll a apoprotein A1 (PsaA)|
           (PSI-A)
          Length = 751

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 213 WFKSVNFILN*HYQRQLHLACYCNCKWATDKVHLHTKIN 97
           WF++V  +LN H    L L C     WA  ++H+   IN
Sbjct: 190 WFQNVESMLNHHLSGLLGLGC---LSWAGHQIHVSLPIN 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,229,279
Number of Sequences: 219361
Number of extensions: 1007737
Number of successful extensions: 2214
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2207
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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