ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63n21 |
|---|---|
| Clone Library Name | barley_pub |
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 166 bits (419), Expect = 3e-41 Identities = 78/78 (100%), Positives = 78/78 (100%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK Sbjct: 247 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 306 Query: 233 LVGGHYDFVSGKFETWEQ 180 LVGGHYDFVSGKFETWEQ Sbjct: 307 LVGGHYDFVSGKFETWEQ 324
>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 321 Score = 109 bits (273), Expect = 2e-24 Identities = 52/76 (68%), Positives = 57/76 (75%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+EDWV+IG PAK KVQ E F DQCT EKEAVNVSL NLLTYPFV+EG+ TL Sbjct: 234 FIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLA 293 Query: 233 LVGGHYDFVSGKFETW 186 L GGHYDFV+G FE W Sbjct: 294 LKGGHYDFVNGGFELW 309
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 108 bits (271), Expect = 4e-24 Identities = 51/77 (66%), Positives = 58/77 (75%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+EDWV+I PAK KV E S F+DQC E+EAVNVSL NLLTYPFV+EGV GTL Sbjct: 172 FIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLA 231 Query: 233 LVGGHYDFVSGKFETWE 183 L GG+YDFV+G FE WE Sbjct: 232 LKGGYYDFVNGSFELWE 248
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 105 bits (261), Expect = 5e-23 Identities = 48/76 (63%), Positives = 56/76 (73%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+EDWV++ PAK KV E DDQC + EKEAVNVSL NLLTYPFV++G+ N TL Sbjct: 242 FIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLA 301 Query: 233 LVGGHYDFVSGKFETW 186 L GGHYDFV+G FE W Sbjct: 302 LKGGHYDFVNGTFELW 317
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 105 bits (261), Expect = 5e-23 Identities = 48/76 (63%), Positives = 56/76 (73%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+EDWV++ PAK KV E DDQC + EKEAVNVSL NLLTYPFV++G+ N TL Sbjct: 243 FIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLA 302 Query: 233 LVGGHYDFVSGKFETW 186 L GGHYDFV+G FE W Sbjct: 303 LKGGHYDFVNGTFELW 318
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 104 bits (259), Expect = 9e-23 Identities = 48/76 (63%), Positives = 56/76 (73%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+EDWV++ PAK KV E DDQC + EKEAVNVSL NLLTYPFV++G+ N TL Sbjct: 243 FIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLA 302 Query: 233 LVGGHYDFVSGKFETW 186 L GGHYDFV+G FE W Sbjct: 303 LKGGHYDFVNGTFELW 318
>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 347 Score = 103 bits (258), Expect = 1e-22 Identities = 48/76 (63%), Positives = 56/76 (73%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+EDWV+I PAK KV +E F+DQC E+EAVNVSL NLLTYPFV+EG+ GTL Sbjct: 249 FIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLA 308 Query: 233 LVGGHYDFVSGKFETW 186 L GG+YDFV G FE W Sbjct: 309 LKGGYYDFVKGAFELW 324
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 103 bits (258), Expect = 1e-22 Identities = 48/76 (63%), Positives = 55/76 (72%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+EDWV++ PAK KV E DDQC EKEAVNVSL NLLTYPFV++G+ N TL Sbjct: 243 FIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLA 302 Query: 233 LVGGHYDFVSGKFETW 186 L GGHYDFV+G FE W Sbjct: 303 LKGGHYDFVNGTFELW 318
>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] Length = 328 Score = 103 bits (257), Expect = 2e-22 Identities = 47/76 (61%), Positives = 56/76 (73%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+E+WV+IG PAK KV+ + PF + CT EKEAVN SL NLLTYPFV+EG+ N TL Sbjct: 241 FIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLA 300 Query: 233 LVGGHYDFVSGKFETW 186 L GG+YDFV G FE W Sbjct: 301 LKGGYYDFVKGSFELW 316
>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) (Fragment) Length = 190 Score = 100 bits (250), Expect = 1e-21 Identities = 44/76 (57%), Positives = 55/76 (72%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+E WV++G PAK KV+ C ++ F D CT EKEAVNVSL NLLTYPFV++ + N L Sbjct: 103 FIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLS 162 Query: 233 LVGGHYDFVSGKFETW 186 L G HYDFV+G F+ W Sbjct: 163 LKGAHYDFVNGAFDLW 178
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 100 bits (248), Expect = 2e-21 Identities = 47/76 (61%), Positives = 56/76 (73%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 234 F+EDWV+I PAK KV E + F +QCT EKEAVNVSL NLLTYPFV++G+ TL Sbjct: 232 FIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLA 291 Query: 233 LVGGHYDFVSGKFETW 186 L GG+YDFV+G FE W Sbjct: 292 LQGGYYDFVNGSFELW 307
>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)| Length = 221 Score = 41.6 bits (96), Expect = 7e-04 Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECA-SMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTL 237 ++ +W++ P K++++ S F + + E+ + L NLL+Y F++E V N L Sbjct: 122 YIANWIQFLEPIKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNEL 181 Query: 236 KLVGGHYDFVSGK 198 K+ G HY +G+ Sbjct: 182 KIFGWHYIIETGR 194
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 39.7 bits (91), Expect = 0.003 Identities = 21/71 (29%), Positives = 35/71 (49%) Frame = -1 Query: 410 VEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKL 231 V DW++ ++ V + DD +L E V ++NL TYP V+ + G L++ Sbjct: 120 VYDWLQHAQATRRLVLDNYSGYETDDLVEILVAENVLTQIENLKTYPIVRSRLFQGKLQI 179 Query: 230 VGGHYDFVSGK 198 G Y+ SG+ Sbjct: 180 FGWIYEVESGE 190
>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 221 Score = 38.9 bits (89), Expect = 0.005 Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -1 Query: 413 FVEDWVRIGFPAKKKVQTECA-SMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTL 237 ++ +W++ P K++++ S F + + E+ + L NLL+Y F++E + L Sbjct: 122 YIANWIQFLEPVKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQEKASKNEL 181 Query: 236 KLVGGHYDFVSGK 198 K+ G HY +G+ Sbjct: 182 KIFGWHYIIETGR 194
>ACCD_PICAB (O47039) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 319 Score = 34.7 bits (78), Expect = 0.089 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = +3 Query: 99 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 278 AL+ + D+ L+YV + S TGG + F + GD ++ G ++D+ +G Sbjct: 220 ALYIPQKDNRLLYVSILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKIVIDQTLG 276 Query: 279 QEVLE 293 Q+V+E Sbjct: 277 QKVIE 281
>ACCD_PINTH (P52769) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 321 Score = 34.3 bits (77), Expect = 0.12 Identities = 17/65 (26%), Positives = 34/65 (52%) Frame = +3 Query: 99 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 278 AL+ H+ + L+Y+ + S TGG + F + GD ++ G ++++ +G Sbjct: 220 ALYIHQKEKKLLYISILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKRVIEQTLG 276 Query: 279 QEVLE 293 Q+V+E Sbjct: 277 QKVIE 281
>YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in chromosome III| Length = 902 Score = 30.0 bits (66), Expect = 2.2 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = +1 Query: 226 PTSLRVPLVTPSLTNG*VKRFWRDTLTA----SFSRTVHWSSKGMEAHSVCT 369 P L++P +T ++ +++W + LTA S +RT +W SK + H + T Sbjct: 390 PEELKLPEITALSSSNTREKYWDNVLTAHKNDSSARTWNWKSKTLGQHVLPT 441
>PYRC_METKA (Q8TXX9) Dihydroorotase (EC 3.5.2.3) (DHOase)| Length = 426 Score = 30.0 bits (66), Expect = 2.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 114 DVNAMPWECVPVIVQYWMPDGPM*ICHKQ 28 D A+PW +P I + PDGP+ I H + Sbjct: 154 DAPAVPWSTLPEIFRELSPDGPLTIFHPE 182
>EF2_METKA (Q8TXJ4) Elongation factor 2 (EF-2) [Contains: Mka fusA intein]| Length = 1257 Score = 30.0 bits (66), Expect = 2.2 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 20/98 (20%) Frame = +3 Query: 105 HSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHT-------LL 263 H+ ++ +++ +L G ++ ELAGD++V+ DE+E G T ++ Sbjct: 545 HNFAAEGFVVHNTTLSDQLLAGAGMISE--ELAGDQLVLDFDEMEQERGITIDAANVSMV 602 Query: 264 DERVGQEVL------EGHVD-------GLLLQDGALVI 338 E G+E L GHVD + DGA+V+ Sbjct: 603 HEYEGEEYLINLIDTPGHVDFSGDVTRAMRAVDGAIVV 640
>CYNT_ECOLI (P0ABE9) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 29.6 bits (65), Expect = 2.9 Identities = 20/76 (26%), Positives = 32/76 (42%) Frame = -1 Query: 410 VEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKL 231 V W+R A+ + S + + +E V L NL T+P V+ + G + L Sbjct: 119 VSHWLRYADSARVVNEARPHS-DLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIAL 177 Query: 230 VGGHYDFVSGKFETWE 183 G YD SG ++ Sbjct: 178 HGWVYDIESGSIAAFD 193
>CYNT_ECO57 (P0ABF0) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 29.6 bits (65), Expect = 2.9 Identities = 20/76 (26%), Positives = 32/76 (42%) Frame = -1 Query: 410 VEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKL 231 V W+R A+ + S + + +E V L NL T+P V+ + G + L Sbjct: 119 VSHWLRYADSARVVNEARPHS-DLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIAL 177 Query: 230 VGGHYDFVSGKFETWE 183 G YD SG ++ Sbjct: 178 HGWVYDIESGSIAAFD 193
>ACCD_CHLVU (P56293) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 411 Score = 29.3 bits (64), Expect = 3.7 Identities = 16/63 (25%), Positives = 32/63 (50%) Frame = +3 Query: 99 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 278 ALH H++ L+Y+ + S TGG + F + GD + L G G ++++ + Sbjct: 192 ALHIHQNCAKLLYISVLTSPTTGG---VTASFAMLGDLLFAEPKALIGFAGRRVIEQTLQ 248 Query: 279 QEV 287 +++ Sbjct: 249 EQL 251
>LPQT_MYCTU (P96384) Putative lipoprotein lpqT precursor| Length = 226 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -1 Query: 233 LVGGHYDFVSGKFETWEQ*IFPTG*LRHIQTYIYQDIVRSM 111 ++ G YD + TW + +FPTG Q Y+ Q + S+ Sbjct: 163 MIQGSYDLHGRRLHTWNRIVFPTGAPPAKQRYLVQLTITSL 203
>LPSBP_PERAM (P26305) Hemolymph lipopolysaccharide-binding protein precursor| (LPS-binding protein) (LPS-BP) Length = 256 Score = 29.3 bits (64), Expect = 3.7 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -1 Query: 323 VLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFET 189 ++ E + LQNL + EG TN +G H FV G+F T Sbjct: 157 IINSEDESKVLQNLFSKVTKTEGATNNDYIFIGIHDRFVEGEFIT 201
>IRBP_HUMAN (P10745) Interphotoreceptor retinoid-binding protein precursor| (IRBP) (Interstitial retinol-binding protein) Length = 1247 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 7/43 (16%) Frame = +3 Query: 234 LEGSVGHTLLDERVGQEVLE-------GHVDGLLLQDGALVIE 341 LEG+VG+ +D GQEVL HV G L+ ALV++ Sbjct: 126 LEGNVGYLRVDSVPGQEVLSMMGEFLVAHVWGNLMGTSALVLD 168
>RPOZ_VIBPA (Q87TB0) DNA-directed RNA polymerase omega chain (EC 2.7.7.6) (RNAP| omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) Length = 90 Score = 28.9 bits (63), Expect = 4.9 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +3 Query: 111 HRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADEL-EGSVGHTLLDERVGQEV 287 +R D +LI R TGG+D L+P E V+A E+ EG + +LD R QE Sbjct: 15 NRFDLVLIAARRARQMQTGGKDALVP--EENDKPTVIALREIEEGLITKEVLDARERQEQ 72 Query: 288 LE 293 E Sbjct: 73 QE 74
>NADA_LISIN (Q929Z0) Quinolinate synthetase A| Length = 366 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 168 GEDLLLPCFELAGDEVVVAADELEGSV 248 GEDL +PC DEVV AD + S+ Sbjct: 36 GEDLFIPCHHYQKDEVVPFADAIGDSL 62
>ACCD_EPIVI (P30064) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 493 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/66 (25%), Positives = 33/66 (50%) Frame = +3 Query: 99 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 278 AL ++S+ L+YV + S TGG + F + GD ++ + G ++++ + Sbjct: 392 ALFDYQSNKKLLYVSILTSPTTGG---VTASFGMLGDIIIAEPNSYIAFAGKRVIEQTLH 448 Query: 279 QEVLEG 296 + V EG Sbjct: 449 KIVPEG 454
>RPOZ_VIBVY (Q7MPX0) DNA-directed RNA polymerase omega chain (EC 2.7.7.6) (RNAP| omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) Length = 90 Score = 28.5 bits (62), Expect = 6.4 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +3 Query: 111 HRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADEL-EGSVGHTLLDERVGQEV 287 +R D +LI R TGG+D L+P E V+A E+ EG + +LD R QE Sbjct: 15 NRFDLVLIAARRARQMQTGGKDSLVP--EENDKPTVIALREIEEGLITKEVLDARERQEQ 72 Query: 288 LE 293 E Sbjct: 73 QE 74
>RPOZ_VIBVU (Q8DDV5) DNA-directed RNA polymerase omega chain (EC 2.7.7.6) (RNAP| omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) Length = 90 Score = 28.5 bits (62), Expect = 6.4 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +3 Query: 111 HRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADEL-EGSVGHTLLDERVGQEV 287 +R D +LI R TGG+D L+P E V+A E+ EG + +LD R QE Sbjct: 15 NRFDLVLIAARRARQMQTGGKDSLVP--EENDKPTVIALREIEEGLITKEVLDARERQEQ 72 Query: 288 LE 293 E Sbjct: 73 QE 74
>CBIO_VIBVY (Q7MFH3) Putative cobalt import ATP-binding protein cbiO| Length = 574 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = +3 Query: 204 GDEVVVAADELEGSVGHT--LLDERVGQEVLEGHVDGLLLQDGALVI 338 G + D+L G T +++ R+ ++VL HVD ++L DG +I Sbjct: 178 GKRTIEIIDDLHRKTGKTVVIIEHRL-EDVLHRHVDRIILMDGGEII 223
>ACCD_CUSRE (P31562) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 497 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/63 (23%), Positives = 31/63 (49%) Frame = +3 Query: 99 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 278 AL+ ++S+ L+YV + S GG + F + GD ++V G ++++ + Sbjct: 379 ALYDYQSNKRLVYVSILTSPTAGG---VTASFGMLGDIIIVEPRAYVAFAGKRVIEQTLN 435 Query: 279 QEV 287 Q + Sbjct: 436 QTI 438
>SCRA_LIMPO (Q25390) Alpha-scruin| Length = 918 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%) Frame = -3 Query: 138 HISRYRPI--DVNAMPWECVPVIVQYWMPD 55 +IS YRP+ D + + E VPV + +W PD Sbjct: 478 YISGYRPLPPDQDDLSKELVPVSIPFWPPD 507 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,236,753 Number of Sequences: 219361 Number of extensions: 1219123 Number of successful extensions: 4167 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4022 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4165 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
