Clone Name | rbah63n21 |
---|---|
Clone Library Name | barley_pub |
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 Score = 779 bits (393), Expect = 0.0 Identities = 393/393 (100%) Strand = Plus / Minus Query: 21 ggttctattgcttatggcaaattcacatcgggccatccggcatccagtactggacaataa 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1377 ggttctattgcttatggcaaattcacatcgggccatccggcatccagtactggacaataa 1318 Query: 81 cgggtacgcactcccatggcattgcattcacatcgatcggacgatatcttgatatatgta 140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 cgggtacgcactcccatggcattgcattcacatcgatcggacgatatcttgatatatgta 1258 Query: 141 cgtttgtatatgtcggagttaaccggtggggaagatttactgctcccatgtttcgaactt 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 cgtttgtatatgtcggagttaaccggtggggaagatttactgctcccatgtttcgaactt 1198 Query: 201 gccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctc 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1197 gccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctc 1138 Query: 261 cttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccag 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 cttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccag 1078 Query: 321 gacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggc 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 gacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggc 1018 Query: 381 cgggaacccgatcctgacccagtcctcaacgaa 413 ||||||||||||||||||||||||||||||||| Sbjct: 1017 cgggaacccgatcctgacccagtcctcaacgaa 985
>ref|NM_192260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 212 bits (107), Expect = 7e-52 Identities = 188/215 (87%) Strand = Plus / Minus Query: 199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 258 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 797 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 738 Query: 259 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 318 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 737 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 678 Query: 319 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 378 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 677 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 618 Query: 379 gccgggaacccgatcctgacccagtcctcaacgaa 413 || ||||| ||| |||||||||||||||| ||||| Sbjct: 617 gcggggaaaccggtcctgacccagtcctcgacgaa 583
>dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102G17, full insert sequence Length = 1163 Score = 212 bits (107), Expect = 7e-52 Identities = 188/215 (87%) Strand = Plus / Minus Query: 199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 258 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 847 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 788 Query: 259 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 318 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 787 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 728 Query: 319 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 378 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 727 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 668 Query: 379 gccgggaacccgatcctgacccagtcctcaacgaa 413 || ||||| ||| |||||||||||||||| ||||| Sbjct: 667 gcggggaaaccggtcctgacccagtcctcgacgaa 633
>dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B12, full insert sequence Length = 1165 Score = 212 bits (107), Expect = 7e-52 Identities = 188/215 (87%) Strand = Plus / Minus Query: 199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 258 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 846 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 787 Query: 259 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 318 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 786 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 727 Query: 319 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 378 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 726 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 667 Query: 379 gccgggaacccgatcctgacccagtcctcaacgaa 413 || ||||| ||| |||||||||||||||| ||||| Sbjct: 666 gcggggaaaccggtcctgacccagtcctcgacgaa 632
>gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, complete cds Length = 1169 Score = 212 bits (107), Expect = 7e-52 Identities = 188/215 (87%) Strand = Plus / Minus Query: 199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 258 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 841 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 782 Query: 259 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 318 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 781 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 722 Query: 319 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 378 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 721 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 662 Query: 379 gccgggaacccgatcctgacccagtcctcaacgaa 413 || ||||| ||| |||||||||||||||| ||||| Sbjct: 661 gcggggaaaccggtcctgacccagtcctcgacgaa 627
>gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase mRNA, complete cds Length = 1148 Score = 212 bits (107), Expect = 7e-52 Identities = 188/215 (87%) Strand = Plus / Minus Query: 199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 258 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 832 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 773 Query: 259 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 318 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 772 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 713 Query: 319 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 378 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 712 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 653 Query: 379 gccgggaacccgatcctgacccagtcctcaacgaa 413 || ||||| ||| |||||||||||||||| ||||| Sbjct: 652 gcggggaaaccggtcctgacccagtcctcgacgaa 618
>gb|AY109272.1| Zea mays PCO064414 mRNA sequence Length = 978 Score = 159 bits (80), Expect = 9e-36 Identities = 179/212 (84%) Strand = Plus / Minus Query: 202 ccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctcc 261 ||||| ||||||||||||||| ||||||| ||||||||||| || |||| || || ||| Sbjct: 719 ccggacacgaagtcgtagtgggcgccgaccagcttgagggtccccttggccagcccttcc 660 Query: 262 ttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccagg 321 | |||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 659 tggacgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctccagg 600 Query: 322 acggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggcc 381 | || ||||||||||||||| |||| ||||||| ||| ||| |||||| |||||| Sbjct: 599 atggagcactggtcatcgaagggcacggaggcgtgctctttcttcaccttgaccttggca 540 Query: 382 gggaacccgatcctgacccagtcctcaacgaa 413 ||||| |||||| ||||||||| ||| ||||| Sbjct: 539 gggaagccgatcttgacccagttctcgacgaa 508
>gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase mRNA, complete cds Length = 2184 Score = 133 bits (67), Expect = 5e-28 Identities = 133/155 (85%) Strand = Plus / Minus Query: 259 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 318 ||||||||||| |||||| || |||||||||||| |||||||| ||||||||||||||| Sbjct: 671 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacggcctccttctcc 612 Query: 319 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 378 |||| || ||||||||||||||| |||| ||| ||| ||| ||| |||||| |||||| Sbjct: 611 aggatggagcactggtcatcgaacggcacggacgcgtgctctttcttcaccttgttcttg 552 Query: 379 gccgggaacccgatcctgacccagtcctcaacgaa 413 || ||| |||||||||||||||||||| ||||| Sbjct: 551 gcagggctgccgatcctgacccagtcctccacgaa 517 Score = 125 bits (63), Expect = 1e-25 Identities = 132/155 (85%) Strand = Plus / Minus Query: 259 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 318 |||||||| || |||||| || |||||||||||| |||||||| ||||||||||||||| Sbjct: 1277 tccttgaccaaggggtagctcttgaggttctggagcgacacgttcacggcctccttctcc 1218 Query: 319 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 378 |||| || ||||||||||||||| |||| ||| ||| ||| ||| |||||| |||||| Sbjct: 1217 aggatggagcactggtcatcgaacggcacggacgcgtgctctttcttcaccttgttcttg 1158 Query: 379 gccgggaacccgatcctgacccagtcctcaacgaa 413 || ||| |||||||||||||||||||| ||||| Sbjct: 1157 gcagggctgccgatcctgacccagtcctccacgaa 1123 Score = 91.7 bits (46), Expect = 2e-15 Identities = 118/142 (83%) Strand = Plus / Minus Query: 205 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 264 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 1934 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1875 Query: 265 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 324 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 1874 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 1815 Query: 325 gtgcactggtcatcgaaaggca 346 | |||||||||||||| |||| Sbjct: 1814 gaccactggtcatcgaacggca 1793
>gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds Length = 1920 Score = 133 bits (67), Expect = 5e-28 Identities = 133/155 (85%) Strand = Plus / Minus Query: 259 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 318 ||||||||||| |||||| || |||||||||||| |||||||| ||||||||||||||| Sbjct: 950 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacggcctccttctcc 891 Query: 319 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 378 |||| || ||||||||||||||| |||| ||| ||| ||| ||| |||||| |||||| Sbjct: 890 aggatggagcactggtcatcgaacggcacggacgcgtgctctttcttcaccttgttcttg 831 Query: 379 gccgggaacccgatcctgacccagtcctcaacgaa 413 || ||| |||||||||||||||||||| ||||| Sbjct: 830 gcagggctgccgatcctgacccagtcctccacgaa 796 Score = 105 bits (53), Expect = 1e-19 Identities = 170/209 (81%) Strand = Plus / Minus Query: 205 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 264 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551 Query: 265 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 324 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 1491 Query: 325 gtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggccggg 384 | ||||||||||||||| |||| |||||| ||| ||| |||||| ||||||| | Sbjct: 1490 gagcactggtcatcgaacggcaccgaggcgtgctctttctttaccttcatcttggcaatg 1431 Query: 385 aacccgatcctgacccagtcctcaacgaa 413 || |||||| | ||||||||||| ||||| Sbjct: 1430 aagccgatcttaacccagtcctcgacgaa 1402
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 258 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 25698466 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 25698407 Query: 259 tccttgacgaacgggtaggtcaagaggttct 289 ||||||||||||||||||||| |||||||| Sbjct: 25698406 tccttgacgaacgggtaggtcttgaggttct 25698376 Score = 93.7 bits (47), Expect = 4e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 311 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 370 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 25698164 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 25698105 Query: 371 tcttcttggccgggaacccgatcctgacccagtcctcaacgaa 413 |||||||||| ||||| ||| |||||||||||||||| ||||| Sbjct: 25698104 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaa 25698062
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 258 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 145272 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 145213 Query: 259 tccttgacgaacgggtaggtcaagaggttct 289 ||||||||||||||||||||| |||||||| Sbjct: 145212 tccttgacgaacgggtaggtcttgaggttct 145182 Score = 93.7 bits (47), Expect = 4e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 311 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 370 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 144970 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 144911 Query: 371 tcttcttggccgggaacccgatcctgacccagtcctcaacgaa 413 |||||||||| ||||| ||| |||||||||||||||| ||||| Sbjct: 144910 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaa 144868
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 258 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 930 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 871 Query: 259 tccttgacgaacgggtaggtcaagaggttct 289 ||||||||||||||||||||| |||||||| Sbjct: 870 tccttgacgaacgggtaggtcttgaggttct 840 Score = 93.7 bits (47), Expect = 4e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 311 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 370 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 628 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 569 Query: 371 tcttcttggccgggaacccgatcctgacccagtcctcaacgaa 413 |||||||||| ||||| ||| |||||||||||||||| ||||| Sbjct: 568 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaa 526
>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds Length = 1208 Score = 125 bits (63), Expect = 1e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 207 gacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 266 |||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||| || Sbjct: 864 gacgaagtcgtagtggccgccgaccagcttgagggagccgttggacacaccttccttcac 805 Query: 267 gaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacggt 326 | |||||||||| |||||| | ||||| |||||||||||||||||||||| || || Sbjct: 804 ccaggggtaggtcaggaggttgtacagggagacgttgacggcctccttctccaagatgga 745 Query: 327 gcactggtcatcgaa 341 ||||||||| ||||| Sbjct: 744 gcactggtcgtcgaa 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 367 accttcttcttggccgggaacccgatcctgacccagtcctcaacgaa 413 |||||||||||||| |||| |||||||||||||||||||| ||||| Sbjct: 704 accttcttcttggcgaggaagccgatcctgacccagtcctcgacgaa 658
>gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mRNA, complete cds Length = 1034 Score = 125 bits (63), Expect = 1e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 207 gacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 266 |||||||||||||||||||||||| |||||||||| ||||||| ||| || ||||| || Sbjct: 703 gacgaagtcgtagtggccgccgaccagcttgagggacccgttggacacgccttccttcac 644 Query: 267 gaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacggt 326 | |||||||||| |||||| | |||||| |||||||| ||||||||||||| || || Sbjct: 643 ccaggggtaggtcaggaggttgtagagggagacgttgactgcctccttctccaagatgga 584 Query: 327 gcactggtcatcgaa 341 ||||||||||||||| Sbjct: 583 gcactggtcatcgaa 569 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Minus Query: 367 accttcttcttggccgggaacccgatcctgacccagtcctcaacgaa 413 ||||||||||| || |||| |||||||||||||| ||||| ||||| Sbjct: 543 accttcttcttcgcgaggaagccgatcctgacccaatcctcgacgaa 497
>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds Length = 8532 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 258 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 8047 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 7988 Query: 259 tccttgacgaacgggtaggtcaagaggttct 289 ||||||||||||||||||||| |||||||| Sbjct: 7987 tccttgacgaacgggtaggtcttgaggttct 7957 Score = 93.7 bits (47), Expect = 4e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 311 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 370 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 7745 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 7686 Query: 371 tcttcttggccgggaacccgatcctgacccagtcctcaacgaa 413 |||||||||| ||||| ||| |||||||||||||||| ||||| Sbjct: 7685 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaa 7643
>gb|AY109373.1| Zea mays CL2331_1 mRNA sequence Length = 2552 Score = 105 bits (53), Expect = 1e-19 Identities = 170/209 (81%) Strand = Plus / Minus Query: 205 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 264 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551 Query: 265 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 324 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 1491 Query: 325 gtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggccggg 384 | ||||||||||||||| |||| |||||| ||| ||| |||||| ||||||| | Sbjct: 1490 gagcactggtcatcgaacggcaccgaggcgtgctctttctttaccttcatcttggcaatg 1431 Query: 385 aacccgatcctgacccagtcctcaacgaa 413 || |||||| | ||||||||||| ||||| Sbjct: 1430 aagccgatcttaacccagtcctcgacgaa 1402 Score = 83.8 bits (42), Expect = 4e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 308 cctccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgca 367 ||||||||||||||| || ||||||||||||||| |||| ||| ||| ||| ||| || Sbjct: 901 cctccttctccaggatggagcactggtcatcgaacggcacggacgcgtgctctttcttca 842 Query: 368 ccttcttcttggccgggaacccgatcctgacccagtcctcaacgaa 413 |||| |||||||| ||| |||||||||||||||||||| ||||| Sbjct: 841 ccttgttcttggcagggctgccgatcctgacccagtcctccacgaa 796
>gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog mRNA, partial cds Length = 210 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Minus Query: 205 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 264 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 171 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 112 Query: 265 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 324 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 111 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 52 Query: 325 gtgcactggtcatcgaa 341 | ||||||||||||||| Sbjct: 51 gagcactggtcatcgaa 35
>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete sequence Length = 138197 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 tatatgtacgtttgtatatgt 153 ||||||||||||||||||||| Sbjct: 80852 tatatgtacgtttgtatatgt 80872
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 298 acgttgacggcctccttctccagga 322 |||||||||||||||||| |||||| Sbjct: 2833138 acgttgacggcctccttcgccagga 2833114
>ref|XM_467687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 102 ggccgccgacgagcttgagg 121
>ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0019M20.11), mRNA Length = 642 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 189 ggccgccgacgagcttgagg 208
>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete sequence Length = 252420 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tgatatatgtacgtttgtatatgt 153 |||||||||||| ||||||||||| Sbjct: 127219 tgatatatgtacatttgtatatgt 127196
>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 Contains the 5' end of the gene for a novel protein (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG) pseudogene and a CpG island, complete sequence Length = 128216 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ttctattgcttatggcaaat 42 |||||||||||||||||||| Sbjct: 55862 ttctattgcttatggcaaat 55881
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 110220 ggccgccgacgagcttgagg 110239
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 14930442 ggccgccgacgagcttgagg 14930461
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 28350077 ggccgccgacgagcttgagg 28350096
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 30832078 ggccgccgacgagcttgagg 30832097
>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence Length = 189466 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atatatgtacgtttgtatat 151 |||||||||||||||||||| Sbjct: 169067 atatatgtacgtttgtatat 169048
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 62655 ggccgccgacgagcttgagg 62674
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 148106 ggccgccgacgagcttgagg 148125
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 15655 ggccgccgacgagcttgagg 15674
>dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C02, full insert sequence Length = 1138 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 102 ggccgccgacgagcttgagg 121
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 59918 ggccgccgacgagcttgagg 59937
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggccgccgacgagcttgagg 240 |||||||||||||||||||| Sbjct: 14938683 ggccgccgacgagcttgagg 14938702
>gb|AF018256.1|AF018256 Ambystoma tigrinum glutamate transporter 1 (sEAAT1) mRNA, complete cds Length = 1980 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 tctgcaccttcttcttggcc 381 |||||||||||||||||||| Sbjct: 265 tctgcaccttcttcttggcc 246 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,504,540 Number of Sequences: 3902068 Number of extensions: 2504540 Number of successful extensions: 41004 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40821 Number of HSP's gapped (non-prelim): 181 length of query: 413 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 391 effective length of database: 17,147,199,772 effective search space: 6704555110852 effective search space used: 6704555110852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)