Clone Name | rbah63n16 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase rec... | 32 | 0.79 | 2 | NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK ... | 29 | 5.1 | 3 | JIL1_DROME (Q9V3I5) Chromosomal serine/threonine-protein kinase ... | 28 | 6.7 | 4 | SCN9A_HUMAN (Q15858) Sodium channel protein type 9 alpha subunit... | 28 | 6.7 |
---|
>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor| precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 Score = 31.6 bits (70), Expect = 0.79 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -3 Query: 411 VGLWCIQMRSRDRPTMSEVIEILEAGVDDLQMPSRPFFC 295 +GL C+Q + RP MS V+ + + ++ P P +C Sbjct: 784 IGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKPPGYC 822
>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)| Length = 389 Score = 28.9 bits (63), Expect = 5.1 Identities = 10/27 (37%), Positives = 20/27 (74%) Frame = -3 Query: 420 LCVVGLWCIQMRSRDRPTMSEVIEILE 340 + V+ L CI + ++ RPTM+E+++ +E Sbjct: 325 IAVLALDCISIDAKSRPTMNEIVKTME 351
>JIL1_DROME (Q9V3I5) Chromosomal serine/threonine-protein kinase JIL-1 (EC| 2.7.11.1) Length = 1207 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 2/28 (7%) Frame = -3 Query: 402 WCIQMRSRDRPTMSEVI--EILEAGVDD 325 WC+Q DRPT+S+++ E L+ G +D Sbjct: 865 WCLQRDPADRPTLSDILDSEWLQYGSND 892
>SCN9A_HUMAN (Q15858) Sodium channel protein type 9 alpha subunit (Sodium channel| protein type IX alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.7) (Neuroendocrine sodium channel) (hNE-Na) (Peripheral sodium channel 1) Length = 1988 Score = 28.5 bits (62), Expect = 6.7 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +2 Query: 44 TEHLYWVGIVTTITFTDKCI 103 TE LYW+ +V I FT +C+ Sbjct: 1544 TEVLYWINVVFIILFTGECV 1563 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,488,695 Number of Sequences: 219361 Number of extensions: 667376 Number of successful extensions: 1932 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1923 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1932 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)