ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63n14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 129 bits (65), Expect = 5e-27 Identities = 83/89 (93%) Strand = Plus / Minus Query: 161 ctagtggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgag 220 |||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| Sbjct: 981 ctagtggaacttgaggctggtgagcacgttgttgttgacggggtcggcgaggtggtcgag 922 Query: 221 gaggttctggaagggcccgacgccggtga 249 ||||||||||| || ||||||||||||| Sbjct: 921 caggttctggaacgggccgacgccggtga 893
>ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1078 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1112 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 857 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 798 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 797 ttctgcacggggccaaccccggtgaa 772
>ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 866 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 807 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 806 ttctgcacggggccaaccccggtgaa 781
>ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 872 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 813 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 812 ttctgcacggggccaaccccggtgaa 787
>ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 872 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 813 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 812 ttctgcacggggccaaccccggtgaa 787
>ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>ref|XM_464480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 762 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 703 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 702 ttctgcacggggccaaccccggtgaa 677
>ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 890 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 831 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 830 ttctgcacggggccaaccccggtgaa 805
>ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 890 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 831 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 830 ttctgcacggggccaaccccggtgaa 805
>ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 893 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 834 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 833 ttctgcacggggccaaccccggtgaa 808
>ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 893 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 834 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 833 ttctgcacggggccaaccccggtgaa 808
>ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1151 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 896 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 837 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 836 ttctgcacggggccaaccccggtgaa 811
>ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1168 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 913 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 854 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 853 ttctgcacggggccaaccccggtgaa 828
>ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1198 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 943 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 884 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 883 ttctgcacggggccaaccccggtgaa 858
>ref|XM_506748.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 873 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 814 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 813 ttctgcacggggccaaccccggtgaa 788
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Plus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 5468903 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 5468962 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 5468963 ttctgcacggggccaaccccggtgaa 5468988
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Plus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 122484 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 122543 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 122544 ttctgcacggggccaaccccggtgaa 122569
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Plus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 13638 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 13697 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 13698 ttctgcacggggccaaccccggtgaa 13723
>dbj|AK109398.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A11, full insert sequence Length = 1128 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 873 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 814 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 813 ttctgcacggggccaaccccggtgaa 788
>dbj|AK119554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E06, full insert sequence Length = 1129 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>dbj|AK106085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B02, full insert sequence Length = 1198 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 943 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 884 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 883 ttctgcacggggccaaccccggtgaa 858
>dbj|AK104557.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G04, full insert sequence Length = 1112 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 857 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 798 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 797 ttctgcacggggccaaccccggtgaa 772
>dbj|AK104535.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E04, full insert sequence Length = 1148 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 893 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 834 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 833 ttctgcacggggccaaccccggtgaa 808
>dbj|AK104522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E10, full insert sequence Length = 1078 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>dbj|AK104734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C11, full insert sequence Length = 1121 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 866 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 807 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 806 ttctgcacggggccaaccccggtgaa 781
>dbj|AK104646.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H01, full insert sequence Length = 1127 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 872 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 813 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 812 ttctgcacggggccaaccccggtgaa 787
>dbj|AK104636.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D09, full insert sequence Length = 1126 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 871 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 812 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 811 ttctgcacggggccaaccccggtgaa 786
>dbj|AK104469.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D06, full insert sequence Length = 1145 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 890 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 831 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 830 ttctgcacggggccaaccccggtgaa 805
>dbj|AK104458.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B05, full insert sequence Length = 1129 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>dbj|AK104446.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B11, full insert sequence Length = 1148 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 893 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 834 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 833 ttctgcacggggccaaccccggtgaa 808
>dbj|AK104392.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H10, full insert sequence Length = 1151 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 896 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 837 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 836 ttctgcacggggccaaccccggtgaa 811
>dbj|AK104385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-E04, full insert sequence Length = 1121 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>dbj|AK104348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F11, full insert sequence Length = 1145 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 890 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 831 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 830 ttctgcacggggccaaccccggtgaa 805
>dbj|AK104215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H02, full insert sequence Length = 1129 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>dbj|AK104096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B04, full insert sequence Length = 1129 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>dbj|AK068102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130I24, full insert sequence Length = 1017 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 762 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 703 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 702 ttctgcacggggccaaccccggtgaa 677
>dbj|AK060970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D07, full insert sequence Length = 1168 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 913 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 854 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 853 ttctgcacggggccaaccccggtgaa 828
>dbj|AK060143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A02, full insert sequence Length = 988 Score = 75.8 bits (38), Expect = 6e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgaggatgttgttgttgacggggtcggagaggtggtcgaggagg 224 ||||||||||||||||||||||||||||||| |||||| || | |||||| || || ||| Sbjct: 874 tggaacttgaggctggtgaggatgttgttgtggacgggatcagcgaggtgatcaagcagg 815 Query: 225 ttctggaagggcccgacgccggtgaa 250 ||||| | ||| || || |||||||| Sbjct: 814 ttctgcacggggccaaccccggtgaa 789
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||||||||||||||||||||||||||| |||||||| Sbjct: 825 gttgttgttgacggggtcggagaggtggtcggcgaggttct 785
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||||| ||||||| Sbjct: 825 gttgttgttgacggggtcggcgaggtggtcgagcaggttct 785
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 747 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 707
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 1208 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 1168
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 10793743 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 10793703
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 23604290 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 23604250 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcg 218 |||||||||||||||||||| |||||||||| Sbjct: 30025096 gttgttgttgacggggtcggcgaggtggtcg 30025066
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 17466 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 17426
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 66989 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 66949
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 130361 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 130321
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 2682 gttgttgttgacggggtcggtgaggtggtcggcgaggttct 2642
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 818 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 778
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 817 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 777
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 1247 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 1207
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 771 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 731
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 811 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 771
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 816 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 776
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 818 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 778
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 347 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 307
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 816 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 776
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 816 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 776
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 832 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 792
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 797 gttgttgttgacggggtcggcgaggtggtcggcgaggttct 757
>ref|NM_001036140.1| Arabidopsis thaliana LHCA3*1 AT1G61520 (LHCA3*1) transcript variant AT1G61520.2 mRNA, complete cds Length = 1311 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 1075 agtggaacttgaggctggtcaagacgttgttgttgacggg 1036
>ref|NM_104833.2| Arabidopsis thaliana LHCA3*1; chlorophyll binding AT1G61520 (LHCA3*1) transcript variant AT1G61520.1 mRNA, complete cds Length = 1198 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 962 agtggaacttgaggctggtcaagacgttgttgttgacggg 923
>gb|AY093370.1| Arabidopsis thaliana PSI type III chlorophyll a/b-binding protein (At1g61520) mRNA, complete cds Length = 887 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 820 agtggaacttgaggctggtcaagacgttgttgttgacggg 781
>gb|AY059879.1| Arabidopsis thaliana PSI type III chlorophyll a/b-binding protein (At1g61520; T25B24.12) mRNA, complete cds Length = 1070 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 908 agtggaacttgaggctggtcaagacgttgttgttgacggg 869
>emb|BX813509.1|CNS0AEAC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 348 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 188 agtggaacttgaggctggtcaagacgttgttgttgacggg 149
>emb|BX815672.1|CNS0ABGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS82ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 306 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 185 agtggaacttgaggctggtcaagacgttgttgttgacggg 146
>emb|BX814451.1|CNS0ACBS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 336 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 172 agtggaacttgaggctggtcaagacgttgttgttgacggg 133
>emb|BX813755.1|CNS0ACAQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 408 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 244 agtggaacttgaggctggtcaagacgttgttgttgacggg 205
>emb|BX814367.1|CNS0AC2R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 492 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 341 agtggaacttgaggctggtcaagacgttgttgttgacggg 302
>emb|BX815288.1|CNS0ABIY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1029 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 898 agtggaacttgaggctggtcaagacgttgttgttgacggg 859
>emb|BX815605.1|CNS0ABBI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZH02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 338 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 188 agtggaacttgaggctggtcaagacgttgttgttgacggg 149
>gb|AY086439.1| Arabidopsis thaliana clone 25124 mRNA, complete sequence Length = 1105 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 965 agtggaacttgaggctggtcaagacgttgttgttgacggg 926
>gb|AC005850.1| Arabidopsis thaliana chromosome I BAC T25B24 genomic sequence, complete sequence Length = 84432 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 70494 agtggaacttgaggctggtcaagacgttgttgttgacggg 70533
>gb|U01103.1|U01103 Arabidopsis thaliana PSI type III chlorophyll a/b-binding protein (Lhca3*1) mRNA, complete cds Length = 1054 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || ||||||||||||||| Sbjct: 898 agtggaacttgaggctggtcaagacgttgttgttgacggg 859
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcg 218 |||||||||||||||||||| |||||||||| Sbjct: 759 gttgttgttgacggggtcggcgaggtggtcg 729
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 188 gttgttgttgacggggtcggagaggtggtcg 218 |||||||||||||||||||| |||||||||| Sbjct: 13915 gttgttgttgacggggtcggcgaggtggtcg 13945
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcg 218 |||||||||||||||||||| |||||||||| Sbjct: 21086 gttgttgttgacggggtcggcgaggtggtcg 21056
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcg 218 |||||||||||||||||||| |||||||||| Sbjct: 840 gttgttgttgacggggtcggcgaggtggtcg 810
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcg 218 |||||||||||||||||||| |||||||||| Sbjct: 840 gttgttgttgacggggtcggcgaggtggtcg 810
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcg 218 |||||||||||||||||||| |||||||||| Sbjct: 842 gttgttgttgacggggtcggcgaggtggtcg 812
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcg 218 |||||||||||||||||||| |||||||||| Sbjct: 842 gttgttgttgacggggtcggcgaggtggtcg 812
>gb|AY194366.1| Vitis vinifera chlorophyll a/b binding protein (Lhca3) mRNA, partial cds; nuclear gene for chloroplast product Length = 646 Score = 52.0 bits (26), Expect = 9e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 164 gtggaacttgaggctggtgaggatgttgttgttgacggggtc 205 |||||||||||||||||| | ||| ||||||||||| ||||| Sbjct: 496 gtggaacttgaggctggttatgatattgttgttgacagggtc 455
>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting chlorophyll-a/b protein of photosystem I (Type III), complete cds Length = 2389 Score = 52.0 bits (26), Expect = 9e-04 Identities = 50/58 (86%) Strand = Plus / Minus Query: 178 tggtgaggatgttgttgttgacggggtcggagaggtggtcgaggaggttctggaaggg 235 |||| ||||||||||||||||||||||| | ||||| || | |||||||||||||| Sbjct: 2224 tggtcaggatgttgttgttgacggggtcagccaggtgctccaccaggttctggaaggg 2167
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 52.0 bits (26), Expect = 9e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtc 217 |||||||||||||||||||| ||||||||| Sbjct: 801 gttgttgttgacggggtcggcgaggtggtc 772
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 796 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 756
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 780
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 780
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 822 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 782
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 785
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 785
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 827 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 787
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 860 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 820
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 22434833 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 22434793
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 95900 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 95860
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 785
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 785
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 785
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 796 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 756
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 785
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 780
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 780
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 785
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 821 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 781
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| |||||||||||| ||||||| Sbjct: 827 gttgttggcgacggggtcggcgaggtggtcgagcaggttct 787
>emb|BX814384.1|CNS0AC3S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 576 Score = 48.1 bits (24), Expect = 0.013 Identities = 36/40 (90%) Strand = Plus / Minus Query: 163 agtggaacttgaggctggtgaggatgttgttgttgacggg 202 ||||||||||||||||||| | || |||||||| |||||| Sbjct: 453 agtggaacttgaggctggtcaagacgttgttgtggacggg 414
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.053 Identities = 32/35 (91%) Strand = Plus / Minus Query: 178 tggtgaggatgttgttgttgacggggtcggagagg 212 ||||||||||| ||||| |||||||||||| |||| Sbjct: 248489 tggtgaggatgatgttggtgacggggtcggcgagg 248455 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 5249466 tgaggatgatgttgctgacggggtcggcgagg 5249497 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 5176821 tgaggatgatgttgctgacggggtcggcgagg 5176852
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 46.1 bits (23), Expect = 0.053 Identities = 29/31 (93%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcg 218 |||||||||||||||||| | |||||||||| Sbjct: 670 gttgttgttgacggggtcagcgaggtggtcg 640
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.053 Identities = 32/35 (91%) Strand = Plus / Minus Query: 178 tggtgaggatgttgttgttgacggggtcggagagg 212 ||||||||||| ||||| |||||||||||| |||| Sbjct: 248489 tggtgaggatgatgttggtgacggggtcggcgagg 248455 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 5315943 tgaggatgatgttgctgacggggtcggcgagg 5315974 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 5243298 tgaggatgatgttgctgacggggtcggcgagg 5243329
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 46.1 bits (23), Expect = 0.053 Identities = 32/35 (91%) Strand = Plus / Plus Query: 178 tggtgaggatgttgttgttgacggggtcggagagg 212 ||||||||||| ||||| |||||||||||| |||| Sbjct: 56504 tggtgaggatgatgttggtgacggggtcggcgagg 56538
>gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b-binding protein mRNA, partial cds Length = 575 Score = 44.1 bits (22), Expect = 0.21 Identities = 25/26 (96%) Strand = Plus / Minus Query: 189 ttgttgttgacggggtcggagaggtg 214 ||||||||||||||||||| |||||| Sbjct: 432 ttgttgttgacggggtcggcgaggtg 407
>emb|AL589767.10| Mouse DNA sequence from clone RP23-141L16 on chromosome X, complete sequence Length = 79904 Score = 44.1 bits (22), Expect = 0.21 Identities = 25/26 (96%) Strand = Plus / Plus Query: 17 cgatataaatattacaagcatgcacg 42 ||||||||||||||||| |||||||| Sbjct: 74405 cgatataaatattacaaacatgcacg 74430
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 44.1 bits (22), Expect = 0.21 Identities = 28/30 (93%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtc 217 |||||||||||||||||||| || |||||| Sbjct: 780 gttgttgttgacggggtcggcgatgtggtc 751
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144, complete sequence Length = 135217 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 gttgacggggtcggagaggtgg 215 |||||||||||||||||||||| Sbjct: 53129 gttgacggggtcggagaggtgg 53150
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 44.1 bits (22), Expect = 0.21 Identities = 28/30 (93%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtc 217 |||||||||||||||||||| ||| ||||| Sbjct: 1156 gttgttgttgacggggtcggcgagatggtc 1127
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 42.1 bits (21), Expect = 0.82 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| || |||||||| |||||||| Sbjct: 79011 gttgttggcgacggggtcggcgacgtggtcgaagaggttct 79051
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.82 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| || |||||||| |||||||| Sbjct: 21808805 gttgttggcgacggggtcggcgacgtggtcgaagaggttct 21808765
>ref|XM_780423.1| PREDICTED: Strongylocentrotus purpuratus similar to zinc finger, FYVE domain containing 28 (LOC580360), mRNA Length = 2850 Score = 42.1 bits (21), Expect = 0.82 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 gttgacggggtcggagaggtg 214 ||||||||||||||||||||| Sbjct: 2522 gttgacggggtcggagaggtg 2502
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.82 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| || |||||||| |||||||| Sbjct: 21801834 gttgttggcgacggggtcggcgacgtggtcgaagaggttct 21801794
>gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR10E07, complete sequence Length = 176818 Score = 42.1 bits (21), Expect = 0.82 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 taatttttatagcacgatataaata 27 ||||||||||||||| ||||||||| Sbjct: 164080 taatttttatagcacaatataaata 164104
>gb|AC009484.3| Homo sapiens BAC clone RP11-313O11 from 2, complete sequence Length = 206074 Score = 42.1 bits (21), Expect = 0.82 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 tataaatattacaagcatgca 40 ||||||||||||||||||||| Sbjct: 8443 tataaatattacaagcatgca 8463
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 0.82 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 gctggtgaggatgttgttgttgacg 200 |||| |||||||||||||||||||| Sbjct: 4473585 gctgttgaggatgttgttgttgacg 4473609
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 42.1 bits (21), Expect = 0.82 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| || |||||||| |||||||| Sbjct: 789 gttgttggcgacggggtcggcgacgtggtcgaagaggttct 749
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 42.1 bits (21), Expect = 0.82 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| || |||||||| |||||||| Sbjct: 804 gttgttggcgacggggtcggcgacgtggtcgaagaggttct 764
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 42.1 bits (21), Expect = 0.82 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| || |||||||| |||||||| Sbjct: 437 gttgttggcgacggggtcggcgacgtggtcgaagaggttct 397
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 42.1 bits (21), Expect = 0.82 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| || |||||||| |||||||| Sbjct: 379 gttgttggcgacggggtcggcgacgtggtcgaagaggttct 339
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 42.1 bits (21), Expect = 0.82 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 taatttttatagcacgatataaata 27 ||||||||||||||| ||||||||| Sbjct: 217305 taatttttatagcacaatataaata 217329
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 42.1 bits (21), Expect = 0.82 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| || |||||||| |||||||| Sbjct: 793 gttgttggcgacggggtcggcgacgtggtcgaagaggttct 753
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 42.1 bits (21), Expect = 0.82 Identities = 27/29 (93%) Strand = Plus / Minus Query: 189 ttgttgttgacggggtcggagaggtggtc 217 ||||||||||||||||||| || |||||| Sbjct: 770 ttgttgttgacggggtcggcgatgtggtc 742
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 42.1 bits (21), Expect = 0.82 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcggagaggtggtcgaggaggttct 228 ||||||| ||||||||||| || |||||||| |||||||| Sbjct: 785 gttgttggcgacggggtcggtgacgtggtcgaagaggttct 745
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195335 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgag 184 |||||||||||||||||||| Sbjct: 62923 tggaacttgaggctggtgag 62904
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 120578 tgaggatgatgttgctgacggggtcggcgagg 120547 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 47933 tgaggatgatgttgctgacggggtcggcgagg 47902
>emb|CR926467.10| Zebrafish DNA sequence from clone DKEYP-20G2 in linkage group 5, complete sequence Length = 153796 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 atataaatattacaagcatg 38 |||||||||||||||||||| Sbjct: 13541 atataaatattacaagcatg 13560
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcgg 207 |||||||||||||||||||| Sbjct: 1771 gttgttgttgacggggtcgg 1752
>emb|CR450794.8| Zebrafish DNA sequence from clone CH211-259I2 in linkage group 14, complete sequence Length = 176875 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 atataaatattacaagcatg 38 |||||||||||||||||||| Sbjct: 174328 atataaatattacaagcatg 174347
>emb|Z35600.1|CEF37A8 Caenorhabditis elegans Cosmid F37A8, complete sequence Length = 35081 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aggacgacgatgctcggatt 156 |||||||||||||||||||| Sbjct: 34546 aggacgacgatgctcggatt 34565
>emb|Z35601.1|CER10E9 Caenorhabditis elegans Cosmid R10E9, complete sequence Length = 21120 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aggacgacgatgctcggatt 156 |||||||||||||||||||| Sbjct: 44 aggacgacgatgctcggatt 63
>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01, complete sequence Length = 123954 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 100749 tgaggatgatgttgctgacggggtcggcgagg 100718
>emb|BX649366.5| Zebrafish DNA sequence from clone DKEY-16I5 in linkage group 12, complete sequence Length = 222310 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 gtacaaatttacattttaca 70 |||||||||||||||||||| Sbjct: 83705 gtacaaatttacattttaca 83686
>ref|NM_065396.2| Caenorhabditis elegans R10E9.3 (R10E9.3) mRNA, complete cds Length = 528 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aggacgacgatgctcggatt 156 |||||||||||||||||||| Sbjct: 70 aggacgacgatgctcggatt 89
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 4795956 tgaggatgatgttggtgacggggtcggcgagg 4795925 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 4774970 tgaggatgatgttggtgacggggtcggcgagg 4774939
>gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180124 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tggaacttgaggctggtgag 184 |||||||||||||||||||| Sbjct: 148953 tggaacttgaggctggtgag 148934
>emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on chromosome 11, complete sequence Length = 213263 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ttgaggctggtgaggatgtt 190 |||||||||||||||||||| Sbjct: 192135 ttgaggctggtgaggatgtt 192116
>emb|AJ507163.1|HEC507163 Hepatitis C virus partial gene for polyprotein, genomic RNA, isolate ETR9 Length = 1341 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggctggtgaggatgttgt 192 |||||||||||||||||||| Sbjct: 1315 gaggctggtgaggatgttgt 1334
>dbj|AK121578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036K16, full insert sequence Length = 1861 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 376 tgaggatgatgttgctgacggggtcggcgagg 345
>dbj|AK111754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056F18, full insert sequence Length = 2791 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 468 tgaggatgatgttggtgacggggtcggcgagg 437
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcgg 207 |||||||||||||||||||| Sbjct: 823 gttgttgttgacggggtcgg 804
>dbj|AK072329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E06, full insert sequence Length = 2667 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 376 tgaggatgatgttgctgacggggtcggcgagg 345
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcgg 207 |||||||||||||||||||| Sbjct: 1771 gttgttgttgacggggtcgg 1752
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 4795937 tgaggatgatgttggtgacggggtcggcgagg 4795906 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 4774951 tgaggatgatgttggtgacggggtcggcgagg 4774920
>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161762 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 72161 tgaggatgatgttggtgacggggtcggcgagg 72192 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 181 tgaggatgttgttgttgacggggtcggagagg 212 |||||||| ||||| |||||||||||| |||| Sbjct: 51175 tgaggatgatgttggtgacggggtcggcgagg 51206
>gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein of PS II mRNA, partial cds Length = 551 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gttgttgttgacggggtcgg 207 |||||||||||||||||||| Sbjct: 357 gttgttgttgacggggtcgg 338 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,665,213 Number of Sequences: 3902068 Number of extensions: 2665213 Number of successful extensions: 53420 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52984 Number of HSP's gapped (non-prelim): 435 length of query: 252 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 230 effective length of database: 17,147,199,772 effective search space: 3943855947560 effective search space used: 3943855947560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
