ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63n05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073K01, full insert sequence Length = 1359 Score = 198 bits (100), Expect = 2e-47 Identities = 163/184 (88%) Strand = Plus / Minus Query: 431 gcgcatggcaagtatcctgtcccatgacaatatgtgcatctgttcttttcttgctgcctc 490 ||||||||||||||||| |||||||| |||||||| || || ||||| ||||||||||| Sbjct: 814 gcgcatggcaagtatccagtcccatggcaatatgtacaccttttcttctcttgctgcctg 755 Query: 491 acatttttcacttcaaccaacattaaggctgaaattacaccaactgcaccacctgaaaag 550 || ||| | | ||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 754 acgtttctaatttcaaccaacattaatgccgagattacaccaactgcaccacctgaaaag 695 Query: 551 gatgccactatgggatctacctgacttaactgaagaggcaaataaatgttccgtataaaa 610 |||||||| |||||||||||||||||||| ||||||||||| | ||| ||| ||||||| Sbjct: 694 gatgccacaatgggatctacctgacttaattgaagaggcaagtgcatggtccttataaaa 635 Query: 611 tctt 614 |||| Sbjct: 634 tctt 631 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Minus Query: 269 aagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgtt 328 ||||| ||||| |||||||||||||| |||||||||||| |||| ||||||||||| ||| Sbjct: 1003 aaggggtctatccgtgggtcatgctcgcttgccattgccgttcctgtgcacaagcaagtt 944 Query: 329 gggcacatcacctttccagctcctgaacaattgg 362 |||||||||||||||||||||||||||||||||| Sbjct: 943 gggcacatcacctttccagctcctgaacaattgg 910
>dbj|AK067439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100E03, full insert sequence Length = 1166 Score = 198 bits (100), Expect = 2e-47 Identities = 163/184 (88%) Strand = Plus / Minus Query: 431 gcgcatggcaagtatcctgtcccatgacaatatgtgcatctgttcttttcttgctgcctc 490 ||||||||||||||||| |||||||| |||||||| || || ||||| ||||||||||| Sbjct: 773 gcgcatggcaagtatccagtcccatggcaatatgtacaccttttcttctcttgctgcctg 714 Query: 491 acatttttcacttcaaccaacattaaggctgaaattacaccaactgcaccacctgaaaag 550 || ||| | | ||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 713 acgtttctaatttcaaccaacattaatgccgagattacaccaactgcaccacctgaaaag 654 Query: 551 gatgccactatgggatctacctgacttaactgaagaggcaaataaatgttccgtataaaa 610 |||||||| |||||||||||||||||||| ||||||||||| | ||| ||| ||||||| Sbjct: 653 gatgccacaatgggatctacctgacttaattgaagaggcaagtgcatggtccttataaaa 594 Query: 611 tctt 614 |||| Sbjct: 593 tctt 590 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Minus Query: 269 aagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgtt 328 ||||| ||||| |||||||||||||| |||||||||||| |||| ||||||||||| ||| Sbjct: 962 aaggggtctatccgtgggtcatgctcgcttgccattgccgttcctgtgcacaagcaagtt 903 Query: 329 gggcacatcacctttccagctcctgaacaattgg 362 |||||||||||||||||||||||||||||||||| Sbjct: 902 gggcacatcacctttccagctcctgaacaattgg 869
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 8e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 449 gtcccatgacaatatgtgcatctgttcttttcttgctgcctcacatttttcacttcaacc 508 |||||||| |||||||| || || ||||| ||||||||||| || ||| | | ||||||| Sbjct: 19735393 gtcccatggcaatatgtacaccttttcttctcttgctgcctgacgtttctaatttcaacc 19735452 Query: 509 aacattaaggctgaaattacaccaactgcaccacctgaaaaggatgccactatgggatct 568 |||||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19735453 aacattaatgccgagattacaccaactgcaccacctgaaaaggatgccacaatgggatct 19735512 Query: 569 acctgact 576 |||||||| Sbjct: 19735513 acctgact 19735520 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 269 aagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgtt 328 ||||| ||||| |||||||||||||| |||||||||||| |||| ||||||||||| ||| Sbjct: 19734602 aaggggtctatccgtgggtcatgctcgcttgccattgccgttcctgtgcacaagcaagtt 19734661 Query: 329 gggcacatcacct 341 ||||||||||||| Sbjct: 19734662 gggcacatcacct 19734674 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 266 tcaaagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcat 325 ||||| ||||| || || ||||| |||||||||||||||||||| |||||||| | ||| Sbjct: 26267396 tcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcagagacat 26267455 Query: 326 gttgggcacatcacct 341 ||||| |||||||||| Sbjct: 26267456 gttggacacatcacct 26267471 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 530 ccaactgcaccacctgaaaaggatgccactatgggatctacctgact 576 |||||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 26268255 ccaactgctccacctgagaacgatgccacaataggatctacctgact 26268301 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 338 acctttccagctcctgaacaattgg 362 ||||||||||||||||||||||||| Sbjct: 19735007 acctttccagctcctgaacaattgg 19735031
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 143 bits (72), Expect = 8e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 449 gtcccatgacaatatgtgcatctgttcttttcttgctgcctcacatttttcacttcaacc 508 |||||||| |||||||| || || ||||| ||||||||||| || ||| | | ||||||| Sbjct: 43944 gtcccatggcaatatgtacaccttttcttctcttgctgcctgacgtttctaatttcaacc 44003 Query: 509 aacattaaggctgaaattacaccaactgcaccacctgaaaaggatgccactatgggatct 568 |||||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 44004 aacattaatgccgagattacaccaactgcaccacctgaaaaggatgccacaatgggatct 44063 Query: 569 acctgact 576 |||||||| Sbjct: 44064 acctgact 44071 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 269 aagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgtt 328 ||||| ||||| |||||||||||||| |||||||||||| |||| ||||||||||| ||| Sbjct: 43153 aaggggtctatccgtgggtcatgctcgcttgccattgccgttcctgtgcacaagcaagtt 43212 Query: 329 gggcacatcacct 341 ||||||||||||| Sbjct: 43213 gggcacatcacct 43225 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 338 acctttccagctcctgaacaattgg 362 ||||||||||||||||||||||||| Sbjct: 43558 acctttccagctcctgaacaattgg 43582
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 143 bits (72), Expect = 8e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 449 gtcccatgacaatatgtgcatctgttcttttcttgctgcctcacatttttcacttcaacc 508 |||||||| |||||||| || || ||||| ||||||||||| || ||| | | ||||||| Sbjct: 92151 gtcccatggcaatatgtacaccttttcttctcttgctgcctgacgtttctaatttcaacc 92210 Query: 509 aacattaaggctgaaattacaccaactgcaccacctgaaaaggatgccactatgggatct 568 |||||||| || || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 92211 aacattaatgccgagattacaccaactgcaccacctgaaaaggatgccacaatgggatct 92270 Query: 569 acctgact 576 |||||||| Sbjct: 92271 acctgact 92278 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 269 aagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgtt 328 ||||| ||||| |||||||||||||| |||||||||||| |||| ||||||||||| ||| Sbjct: 91360 aaggggtctatccgtgggtcatgctcgcttgccattgccgttcctgtgcacaagcaagtt 91419 Query: 329 gggcacatcacct 341 ||||||||||||| Sbjct: 91420 gggcacatcacct 91432 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 338 acctttccagctcctgaacaattgg 362 ||||||||||||||||||||||||| Sbjct: 91765 acctttccagctcctgaacaattgg 91789
>gb|AY110955.1| Zea mays CL31997_1 mRNA sequence Length = 855 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 491 acatttttcacttcaaccaacattaaggctgaaattacaccaactgcaccacctgaaaag 550 |||||| ||||||| ||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 422 acatttctcacttcgaccaacattaaagctgagataacaccaactgcgccacctgaaaat 481 Query: 551 gatgccactatgggatctacctgacttaactgaagagg 588 ||||||||||| |||||||||||||| || |||||||| Sbjct: 482 gatgccactataggatctacctgactcaattgaagagg 519 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 281 cgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatcacc 340 ||||| ||||||||||||||||| |||||||| ||||||||||| || || ||||||||| Sbjct: 194 cgtggatcatgctcacttgccatcgccattcctgtgcacaagcacgtcggacacatcacc 253 Query: 341 tttccagctcctgaacaatt 360 ||||||||||| |||||||| Sbjct: 254 tttccagctccagaacaatt 273 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 434 catggcaagtatcctgtcccatgacaatatgtgca 468 ||||||||||| || |||||||| ||||||||||| Sbjct: 365 catggcaagtacccagtcccatggcaatatgtgca 399
>ref|XM_467076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 266 tcaaagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcat 325 ||||| ||||| || || ||||| |||||||||||||||||||| |||||||| | ||| Sbjct: 1177 tcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcagagacat 1118 Query: 326 gttgggcacatcacctttccagctcctgaacaatt 360 ||||| |||||||||||||| || ||||||||||| Sbjct: 1117 gttggacacatcacctttcctgcgcctgaacaatt 1083 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 530 ccaactgcaccacctgaaaaggatgccactatgggatctacctgact 576 |||||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 883 ccaactgctccacctgagaacgatgccacaataggatctacctgact 837
>dbj|AK099767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095B06, full insert sequence Length = 1437 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 266 tcaaagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcat 325 ||||| ||||| || || ||||| |||||||||||||||||||| |||||||| | ||| Sbjct: 1177 tcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcagagacat 1118 Query: 326 gttgggcacatcacctttccagctcctgaacaatt 360 ||||| |||||||||||||| || ||||||||||| Sbjct: 1117 gttggacacatcacctttcctgcgcctgaacaatt 1083 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 530 ccaactgcaccacctgaaaaggatgccactatgggatctacctgact 576 |||||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 883 ccaactgctccacctgagaacgatgccacaataggatctacctgact 837
>dbj|AK061454.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G08, full insert sequence Length = 1153 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 266 tcaaagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcat 325 ||||| ||||| || || ||||| |||||||||||||||||||| |||||||| | ||| Sbjct: 892 tcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcagagacat 833 Query: 326 gttgggcacatcacctttccagctcctgaacaatt 360 ||||| |||||||||||||| || ||||||||||| Sbjct: 832 gttggacacatcacctttcctgcgcctgaacaatt 798 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 530 ccaactgcaccacctgaaaaggatgccactatgggatctacctgact 576 |||||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 598 ccaactgctccacctgagaacgatgccacaataggatctacctgact 552
>dbj|AK058796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H08, full insert sequence Length = 1024 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 266 tcaaagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcat 325 ||||| ||||| || || ||||| |||||||||||||||||||| |||||||| | ||| Sbjct: 548 tcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcagagacat 489 Query: 326 gttgggcacatcacctttccagctcctgaacaatt 360 ||||| |||||||||||||| || ||||||||||| Sbjct: 488 gttggacacatcacctttcctgcgcctgaacaatt 454 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 530 ccaactgcaccacctgaaaaggatgccactatgggatctacctgact 576 |||||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 254 ccaactgctccacctgagaacgatgccacaataggatctacctgact 208
>ref|NM_203246.1| Arabidopsis thaliana unknown protein AT5G61670 transcript variant AT5G61670.2 mRNA, complete cds Length = 1452 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 956 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 897 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 896 acctttccggcacctgaacagtttgaacatc 866
>ref|NM_125561.2| Arabidopsis thaliana unknown protein AT5G61670 transcript variant AT5G61670.1 mRNA, complete cds Length = 1162 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 999 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 940 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 939 acctttccggcacctgaacagtttgaacatc 909
>gb|AY149953.1| Arabidopsis thaliana At5g61670/k11j9_190 mRNA, complete cds Length = 924 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 908 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 849 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 848 acctttccggcacctgaacagtttgaacatc 818
>gb|AY117226.1| Arabidopsis thaliana unknown protein (At5g61670) mRNA, complete cds Length = 955 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 908 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 849 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 848 acctttccggcacctgaacagtttgaacatc 818
>gb|AY065401.1| Arabidopsis thaliana unknown protein (At5g61670) mRNA, complete cds Length = 1122 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 953 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 894 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 893 acctttccggcacctgaacagtttgaacatc 863
>gb|AY094431.1| Arabidopsis thaliana AT5g61670/k11j9_190 mRNA, complete cds Length = 1100 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 947 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 888 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 887 acctttccggcacctgaacagtttgaacatc 857
>emb|BX832020.1|CNS09ZU3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH47ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1351 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 1224 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 1165 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 1164 acctttccggcacctgaacagtttgaacatc 1134
>emb|BX832200.1|CNS09ZMR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1452 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 956 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 897 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 896 acctttccggcacctgaacagtttgaacatc 866
>emb|BX831353.1|CNS09ZDZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS80ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1174 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 1082 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 1023 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 1022 acctttccggcacctgaacagtttgaacatc 992
>gb|AY084568.1| Arabidopsis thaliana clone 112078 mRNA, complete sequence Length = 1118 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 954 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 895 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 894 acctttccggcacctgaacagtttgaacatc 864
>emb|BX831630.1|CNS09ZP5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1380 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| || |||| ||||| ||||||||| Sbjct: 924 atacgaggatcatgctcactggccatagccattcctgtacacagacatgtcgggcacatc 865 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 864 acctttccggcacctgaacagtttgaacatc 834
>emb|BX832296.1|CNS09ZK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1098 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| || |||| ||||| ||||||||| Sbjct: 1000 atacgaggatcatgctcactggccatagccattcctgttcacagacatgtcgggcacatc 941 Query: 338 acctttccagctcctgaacaattggaacatc 368 |||||||| || |||||||| || ||||||| Sbjct: 940 acctttccggcacctgaacagtttgaacatc 910
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 266 tcaaagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcat 325 ||||| ||||| || || ||||| |||||||||||||||||||| |||||||| | ||| Sbjct: 90237 tcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcagagacat 90296 Query: 326 gttgggcacatcacct 341 ||||| |||||||||| Sbjct: 90297 gttggacacatcacct 90312 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 530 ccaactgcaccacctgaaaaggatgccactatgggatctacctgact 576 |||||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 91096 ccaactgctccacctgagaacgatgccacaataggatctacctgact 91142
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9 Length = 69142 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 278 atacgtgggtcatgctcacttgccattgccattcccgtgcacaagcatgttgggcacatc 337 ||||| || ||||||||||| ||||| |||||||| ||||||| ||||| ||||||||| Sbjct: 59760 atacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcgggcacatc 59701 Query: 338 acct 341 |||| Sbjct: 59700 acct 59697
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 530 ccaactgcaccacctgaaaaggatgccactatgggatctacctgact 576 |||||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 607 ccaactgctccacctgagaacgatgccacaataggatctacctgact 653
>ref|NM_120695.3| Arabidopsis thaliana unknown protein AT5G06130 transcript variant AT5G06130.2 mRNA, complete cds Length = 1362 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 422 gagcaacgggcgcatggcaagtatcctgtcccatgacaatatgtgcatctgttcttttct 481 ||||| || ||||||||||||||||| |||||| | || ||| |||| || ||||| ||| Sbjct: 867 gagcatcgagcgcatggcaagtatccagtcccaaggcagtatttgcacctcttcttctct 808 Query: 482 tgctgcctcacatttttcacttcaaccaacattaaggctgaaattacaccaactgcacca 541 || || | ||||| || ||||| | | ||| |||| |||||| || || || || || Sbjct: 807 tgttgtttaacattgttaacttcgattagcatcaaggttgaaatgactcccacggccccg 748 Query: 542 cctgaaaaggatgccactatgggatctacctgacttaa 579 || ||||| |||||||| || ||||||||||| ||||| Sbjct: 747 ccagaaaaagatgccacaattggatctacctggcttaa 710
>ref|NM_180700.2| Arabidopsis thaliana unknown protein AT5G06130 transcript variant AT5G06130.1 mRNA, complete cds Length = 1576 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 422 gagcaacgggcgcatggcaagtatcctgtcccatgacaatatgtgcatctgttcttttct 481 ||||| || ||||||||||||||||| |||||| | || ||| |||| || ||||| ||| Sbjct: 1081 gagcatcgagcgcatggcaagtatccagtcccaaggcagtatttgcacctcttcttctct 1022 Query: 482 tgctgcctcacatttttcacttcaaccaacattaaggctgaaattacaccaactgcacca 541 || || | ||||| || ||||| | | ||| |||| |||||| || || || || || Sbjct: 1021 tgttgtttaacattgttaacttcgattagcatcaaggttgaaatgactcccacggccccg 962 Query: 542 cctgaaaaggatgccactatgggatctacctgacttaa 579 || ||||| |||||||| || ||||||||||| ||||| Sbjct: 961 ccagaaaaagatgccacaattggatctacctggcttaa 924
>gb|AY133750.1| Arabidopsis thaliana clone U19942 unknown protein (At5g06130) mRNA, complete cds Length = 979 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 422 gagcaacgggcgcatggcaagtatcctgtcccatgacaatatgtgcatctgttcttttct 481 ||||| || ||||||||||||||||| |||||| | || ||| |||| || ||||| ||| Sbjct: 758 gagcatcgagcgcatggcaagtatccagtcccaaggcagtatttgcacctcttcttctct 699 Query: 482 tgctgcctcacatttttcacttcaaccaacattaaggctgaaattacaccaactgcacca 541 || || | ||||| || ||||| | | ||| |||| |||||| || || || || || Sbjct: 698 tgttgtttaacattgttaacttcgattagcatcaaggttgaaatgactcccacggccccg 639 Query: 542 cctgaaaaggatgccactatgggatctacctgacttaa 579 || ||||| |||||||| || ||||||||||| ||||| Sbjct: 638 ccagaaaaagatgccacaattggatctacctggcttaa 601
>gb|AY072147.1| Arabidopsis thaliana unknown protein (At5g06130) mRNA, complete cds Length = 1224 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 422 gagcaacgggcgcatggcaagtatcctgtcccatgacaatatgtgcatctgttcttttct 481 ||||| || ||||||||||||||||| |||||| | || ||| |||| || ||||| ||| Sbjct: 799 gagcatcgagcgcatggcaagtatccagtcccaaggcagtatttgcacctcttcttctct 740 Query: 482 tgctgcctcacatttttcacttcaaccaacattaaggctgaaattacaccaactgcacca 541 || || | ||||| || ||||| | | ||| |||| |||||| || || || || || Sbjct: 739 tgttgtttaacattgttaacttcgattagcatcaaggttgaaatgactcccacggccccg 680 Query: 542 cctgaaaaggatgccactatgggatctacctgacttaa 579 || ||||| |||||||| || ||||||||||| ||||| Sbjct: 679 ccagaaaaagatgccacaattggatctacctggcttaa 642
>emb|BX830149.1|CNS0A1DX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1347 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Minus Query: 422 gagcaacgggcgcatggcaagtatcctgtcccatgacaatatgtgcatctgttcttttct 481 ||||| || ||||||||||||||||| |||||| | || ||| |||| || ||||| ||| Sbjct: 993 gagcatcgagcgcatggcaagtatccagtcccaaggcagtatttgcacctcttcttctct 934 Query: 482 tgctgcctcacatttttcacttcaaccaacattaaggctgaaattacaccaactgcacca 541 || || | ||||| || ||||| | | ||| |||| |||||| || || || || || Sbjct: 933 tgttgtttaacattgttaacttcgattagcatcaaggttgaaatgactcccacggccccg 874 Query: 542 cctgaaaaggatgccactatgggatctacctgacttaa 579 || ||||| |||||||| || ||||||||||| ||||| Sbjct: 873 ccagaaaaagatgccacaattggatctacctggcttaa 836
>gb|AC010245.4|AC010245 Homo sapiens chromosome 5 clone CTC-366B18, complete sequence Length = 117840 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 476 ttttcttgctgcctcacatttttcac 501 |||||||||||||||||||| ||||| Sbjct: 107287 ttttcttgctgcctcacattgttcac 107262
>gb|AC008488.7|AC008488 Homo sapiens chromosome 5 clone CTC-424O12, complete sequence Length = 208117 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 476 ttttcttgctgcctcacatttttcac 501 |||||||||||||||||||| ||||| Sbjct: 130390 ttttcttgctgcctcacattgttcac 130415
>ref|XM_482019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1992 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 catgacaatatgtgcatctgt 473 ||||||||||||||||||||| Sbjct: 1123 catgacaatatgtgcatctgt 1103
>gb|AC145863.3| Pan troglodytes BAC clone RP43-6J8 from 7, complete sequence Length = 190714 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 agatagaaaaggaaaatagca 229 ||||||||||||||||||||| Sbjct: 125789 agatagaaaaggaaaatagca 125809
>gb|BT013273.1| Lycopersicon esculentum clone 134850R, mRNA sequence Length = 1142 Score = 42.1 bits (21), Expect = 2.1 Identities = 81/101 (80%) Strand = Plus / Minus Query: 266 tcaaagggatctatacgtgggtcatgctcacttgccattgccattcccgtgcacaagcat 325 ||||| ||||| || ||||| || || ||||||||||| ||||| || || || | || Sbjct: 994 tcaaatggatcaattcgtggatcgtgttcacttgccatagccatcccagtacaaagacac 935 Query: 326 gttgggcacatcacctttccagctcctgaacaattggaaca 366 || |||||||| |||||||| | |||||||| |||||||| Sbjct: 934 gtagggcacatgacctttcctgaacctgaacagttggaaca 894
>emb|AL135785.10| Human DNA sequence from clone RP11-113O24 on chromosome 9p11-13.3 Contains a novel gene, possible ortholog of mouse insulin-like growth factor binding protein 7 (IGFBP7), a novel gene similar to aldehyde dehydrogenase 1 family, member B1 (ALDH5, ALDHX, MGC2230) (ALDH1B1), a novel gene and four CpG islands, complete sequence Length = 166207 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 cttagcatacagcaaagaaga 100 ||||||||||||||||||||| Sbjct: 61790 cttagcatacagcaaagaaga 61770
>emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, complete sequence Length = 261943 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 atatttgctggtatttaattt 43 ||||||||||||||||||||| Sbjct: 12629 atatttgctggtatttaattt 12649
>emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in linkage group 9, complete sequence Length = 217065 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 atatttgctggtatttaattt 43 ||||||||||||||||||||| Sbjct: 170115 atatttgctggtatttaattt 170135
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 gtgcatctgttcttttcttgc 484 ||||||||||||||||||||| Sbjct: 9746488 gtgcatctgttcttttcttgc 9746508
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 catgacaatatgtgcatctgt 473 ||||||||||||||||||||| Sbjct: 17226217 catgacaatatgtgcatctgt 17226237 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 catgacaatatgtgcatctgt 473 ||||||||||||||||||||| Sbjct: 16802775 catgacaatatgtgcatctgt 16802755
>gb|AC112230.5| Homo sapiens BAC clone RP11-85D18 from 2, complete sequence Length = 196480 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 acattttgctggcagagcaac 428 ||||||||||||||||||||| Sbjct: 184957 acattttgctggcagagcaac 184937
>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0040N23 Length = 101061 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 gtgcatctgttcttttcttgc 484 ||||||||||||||||||||| Sbjct: 18907 gtgcatctgttcttttcttgc 18927
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 gtgcatctgttcttttcttgc 484 ||||||||||||||||||||| Sbjct: 186585 gtgcatctgttcttttcttgc 186605
>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F01 Length = 119248 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 catgacaatatgtgcatctgt 473 ||||||||||||||||||||| Sbjct: 16140 catgacaatatgtgcatctgt 16120
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 catgacaatatgtgcatctgt 473 ||||||||||||||||||||| Sbjct: 150072 catgacaatatgtgcatctgt 150092
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H03 Length = 189893 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 catgacaatatgtgcatctgt 473 ||||||||||||||||||||| Sbjct: 86842 catgacaatatgtgcatctgt 86862
>gb|AF055894.1|AF055894 Phalaenopsis sp. 'True Lady' ethylene receptor homolog (Petr1) mRNA, complete cds Length = 2409 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 ctcacatttttcacttcaacc 508 ||||||||||||||||||||| Sbjct: 2173 ctcacatttttcacttcaacc 2153
>gb|AF113541.1|AF113541 Phalaenopsis sp. 'KCbutterfly' putative ethylene response sensor mRNA, complete cds Length = 2422 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 ctcacatttttcacttcaacc 508 ||||||||||||||||||||| Sbjct: 2186 ctcacatttttcacttcaacc 2166
>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete sequence Length = 192322 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 aacaacagaaaacaatagcta 209 ||||||||||||||||||||| Sbjct: 85311 aacaacagaaaacaatagcta 85291
>gb|AC146891.3| Dasypus novemcinctus clone VMRC5-364E4, complete sequence Length = 133673 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 gctcctgaacaattggaaca 366 |||||||||||||||||||| Sbjct: 13618 gctcctgaacaattggaaca 13599
>gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, complete sequence Length = 218747 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 agcaaagaagaacaaagcaa 109 |||||||||||||||||||| Sbjct: 101675 agcaaagaagaacaaagcaa 101656
>gb|AC155264.2| Mus musculus BAC clone RP23-281B4 from chromosome 16, complete sequence Length = 199531 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ctagatagaaaaggaaaata 226 |||||||||||||||||||| Sbjct: 50134 ctagatagaaaaggaaaata 50153
>ref|XM_640460.1| Dictyostelium discoideum hypothetical protein (DDB0216864), partial mRNA Length = 3639 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 caagcccaactacaacaaca 195 |||||||||||||||||||| Sbjct: 1258 caagcccaactacaacaaca 1277
>gb|DQ223158.1| Silurus meridionalis clone HLJCF31 microsatellite sequence Length = 579 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 gaagaggcaaataaatgttc 601 |||||||||||||||||||| Sbjct: 306 gaagaggcaaataaatgttc 287
>gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, complete sequence Length = 242587 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 gtagaaagtgaaaagtgttt 396 |||||||||||||||||||| Sbjct: 178614 gtagaaagtgaaaagtgttt 178633
>gb|AC091473.2| Mus musculus chromosome X clones RP21-114F21, RP21-430D6 complete sequence Length = 221860 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gttcttttcttgctgcctca 491 |||||||||||||||||||| Sbjct: 81984 gttcttttcttgctgcctca 81965
>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete sequence Length = 185717 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 tcttttcttgctgcctcacatttt 497 ||||||||||||| |||||||||| Sbjct: 58250 tcttttcttgctgtctcacatttt 58227
>gb|BT013966.1| Lycopersicon esculentum clone 132991R, mRNA sequence Length = 1058 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 caaagaagaacaaagcaatt 111 |||||||||||||||||||| Sbjct: 470 caaagaagaacaaagcaatt 489
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ttcttttcttgctgcctcac 492 |||||||||||||||||||| Sbjct: 287020 ttcttttcttgctgcctcac 287001
>gb|AY509875.2| Eucommia ulmoides auxin-binding protein 1 mRNA, complete cds Length = 656 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 aacagaaaacaatagctaga 211 |||||||||||||||||||| Sbjct: 46 aacagaaaacaatagctaga 27
>gb|AC124709.3| Mus musculus BAC clone RP24-83P8 from chromosome 14, complete sequence Length = 195961 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 aactcttagtatacatgaaa 167 |||||||||||||||||||| Sbjct: 69097 aactcttagtatacatgaaa 69078
>ref|XM_846371.1| PREDICTED: Canis familiaris similar to C-type lectin, superfamily member 5 (LOC609161), mRNA Length = 891 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 catctgttcttttcttgctg 486 |||||||||||||||||||| Sbjct: 743 catctgttcttttcttgctg 724
>emb|CR931792.9| Zebrafish DNA sequence from clone DKEY-180L1 in linkage group 13, complete sequence Length = 163673 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 aacaaagcaattttcctgta 119 |||||||||||||||||||| Sbjct: 130878 aacaaagcaattttcctgta 130897
>gb|AC124346.3| Mus musculus BAC clone RP24-460E12 from chromosome 12, complete sequence Length = 203150 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 tgttcttttcttgctgcctc 490 |||||||||||||||||||| Sbjct: 177683 tgttcttttcttgctgcctc 177664
>gb|AC124572.4| Mus musculus BAC clone RP23-159A20 from 12, complete sequence Length = 170191 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 tgttcttttcttgctgcctc 490 |||||||||||||||||||| Sbjct: 28893 tgttcttttcttgctgcctc 28874
>gb|AC161438.6| Mus musculus chromosome 18, clone RP23-62E1, complete sequence Length = 198865 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gtagaaagtgaaaagtgttt 396 |||||||||||||||||||| Sbjct: 186271 gtagaaagtgaaaagtgttt 186252
>emb|AL691452.10| Human DNA sequence from clone RP11-78B10 on chromosome 1 Contains the 3' end of the CR2 gene for complement component (3d/Epstein Barr virus) receptor 2, the CR1 gene for complement component (3b/4b) receptor 1, including Knops blood group system, a membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) (MCP) pseudogene, a novel gene and the 5' end of the CR1L gene for complement component (3b/4b) receptor 1-like, complete sequence Length = 108290 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 tcttttcttgctgcctcacatttt 497 ||||||||||||| |||||||||| Sbjct: 92098 tcttttcttgctgtctcacatttt 92075 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 tcttttcttgctgcctcacatttt 497 ||||||||||||| |||||||||| Sbjct: 73541 tcttttcttgctgtctcacatttt 73518
>emb|AL355381.11| Human DNA sequence from clone RP11-726A23 on chromosome X, complete sequence Length = 138653 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tatttgctggtatttaattt 43 |||||||||||||||||||| Sbjct: 82319 tatttgctggtatttaattt 82300
>gb|AF493055.1| Neocallimastix patriciarum succinyl-CoA synthetase, beta subunit (scsB) mRNA, complete cds Length = 1555 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 tgaaaaggatgccactatgg 563 |||||||||||||||||||| Sbjct: 766 tgaaaaggatgccactatgg 785
>emb|AL035588.21|HS696P19 Human DNA sequence from clone RP4-696P19 on chromosome 6p12.3-21.2 Contains the 3' end of the TFEB gene for transcription factor EB (TCFEB), a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene, the MDFI gene for MyoD family inhibitor, the 5' end of a novel gene and two CpG islands, complete sequence Length = 110665 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 acaacaacagaaaacaatag 206 |||||||||||||||||||| Sbjct: 103501 acaacaacagaaaacaatag 103520
>emb|CR855309.15| Zebrafish DNA sequence from clone DKEY-35B7 in linkage group 4, complete sequence Length = 184943 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 accaactgcaccacctgaaa 548 |||||||||||||||||||| Sbjct: 127239 accaactgcaccacctgaaa 127258
>emb|X84222.2|NFBSCOAS Neocallimastix frontalis mRNA for beta-succinyl CoA synthetase precursor Length = 1449 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 tgaaaaggatgccactatgg 563 |||||||||||||||||||| Sbjct: 729 tgaaaaggatgccactatgg 748
>emb|AL603708.13| Mouse DNA sequence from clone RP23-381C21 on chromosome 11, complete sequence Length = 198743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ctacaacaacagaaaacaat 204 |||||||||||||||||||| Sbjct: 10993 ctacaacaacagaaaacaat 11012
>gb|AC007782.20| Homo sapiens 12 BAC RP11-515B12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166083 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 aaaaggaaaatagcataacc 234 |||||||||||||||||||| Sbjct: 133990 aaaaggaaaatagcataacc 134009
>gb|AC183109.2| Pan troglodytes BAC clone CH251-317D18 from chromosome 5, complete sequence Length = 169688 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 catggcaagtatcctgtccc 453 |||||||||||||||||||| Sbjct: 168851 catggcaagtatcctgtccc 168870
>gb|AF382899.1| Bostrychia calliptera isolate P3066.BZ ribulose-1,5-bisphosphate large subunit (rbcL) gene, partial cds; rbcL-rbcS intergenic spacer, complete sequence; and ribulose-1,5-bisphosphate small subunit (rbcS) gene, partial cds; chloroplast genes for chloroplast products Length = 305 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tacctgacttaactgaagag 587 |||||||||||||||||||| Sbjct: 187 tacctgacttaactgaagag 206
>gb|AF382898.1| Bostrychia calliptera isolate C3041.BZ ribulose-1,5-bisphosphate large subunit (rbcL) gene, partial cds; rbcL-rbcS intergenic spacer, complete sequence; and ribulose-1,5-bisphosphate small subunit (rbcS) gene, partial cds; chloroplast genes for chloroplast products Length = 304 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tacctgacttaactgaagag 587 |||||||||||||||||||| Sbjct: 186 tacctgacttaactgaagag 205
>gb|AF382897.1| Bostrychia calliptera isolate C3042.BZ ribulose-1,5-bisphosphate large subunit (rbcL) gene, partial cds; rbcL-rbcS intergenic spacer, complete sequence; and ribulose-1,5-bisphosphate small subunit (rbcS) gene, partial cds; chloroplast genes for chloroplast products Length = 359 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 tacctgacttaactgaagag 587 |||||||||||||||||||| Sbjct: 241 tacctgacttaactgaagag 260
>gb|AC108509.1| Homo sapiens chromosome 5 clone RP11-546L14, complete sequence Length = 98716 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 catggcaagtatcctgtccc 453 |||||||||||||||||||| Sbjct: 4962 catggcaagtatcctgtccc 4943
>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome Length = 305107 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 atttttcacttcaaccaaca 512 |||||||||||||||||||| Sbjct: 41983 atttttcacttcaaccaaca 41964
>gb|AC008454.6| Homo sapiens chromosome 5 clone CTC-345M13, complete sequence Length = 135513 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 catggcaagtatcctgtccc 453 |||||||||||||||||||| Sbjct: 14492 catggcaagtatcctgtccc 14511
>emb|BX088562.12| Zebrafish DNA sequence from clone CH211-286C4 in linkage group 25, complete sequence Length = 138646 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 taactgaagaggcaaataaa 596 |||||||||||||||||||| Sbjct: 123979 taactgaagaggcaaataaa 123998
>gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 15, complete sequence Length = 177964 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 aatatgtgcatctgttcttttctt 482 |||||||||||||| ||||||||| Sbjct: 112548 aatatgtgcatctgatcttttctt 112525
>gb|AC106795.3| Homo sapiens chromosome 5 clone RP11-423H2, complete sequence Length = 177116 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 catggcaagtatcctgtccc 453 |||||||||||||||||||| Sbjct: 166437 catggcaagtatcctgtccc 166418
>gb|AC140125.3| Homo sapiens chromosome 5 clone RP11-1026M7, complete sequence Length = 217057 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 catggcaagtatcctgtccc 453 |||||||||||||||||||| Sbjct: 62392 catggcaagtatcctgtccc 62373
>gb|AF369029.2| White spot syndrome virus, complete genome Length = 292967 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 atttttcacttcaaccaaca 512 |||||||||||||||||||| Sbjct: 90932 atttttcacttcaaccaaca 90913
>gb|AC007559.3| Homo sapiens BAC clone RP11-364J6 from 2, complete sequence Length = 156374 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 agatagaaaaggaaaatagc 228 |||||||||||||||||||| Sbjct: 74146 agatagaaaaggaaaatagc 74165
>gb|AC116982.2| Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence Length = 256879 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 caagcccaactacaacaaca 195 |||||||||||||||||||| Sbjct: 33613 caagcccaactacaacaaca 33594
>gb|AC138919.2| Homo sapiens chromosome 5 clone RP11-639O24, complete sequence Length = 165870 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 catggcaagtatcctgtccc 453 |||||||||||||||||||| Sbjct: 99562 catggcaagtatcctgtccc 99581
>gb|AC139491.2| Homo sapiens chromosome 5 clone RP11-826N14, complete sequence Length = 186722 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 catggcaagtatcctgtccc 453 |||||||||||||||||||| Sbjct: 124044 catggcaagtatcctgtccc 124063
>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome Length = 307287 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 atttttcacttcaaccaaca 512 |||||||||||||||||||| Sbjct: 75566 atttttcacttcaaccaaca 75547
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ttcttgctgcctcacatttt 497 |||||||||||||||||||| Sbjct: 951794 ttcttgctgcctcacatttt 951813
>emb|BX072538.10| Zebrafish DNA sequence from clone DKEY-217K21 in linkage group 4, complete sequence Length = 179453 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 accaactgcaccacctgaaa 548 |||||||||||||||||||| Sbjct: 101788 accaactgcaccacctgaaa 101769
>dbj|AB100522.1| Tilapia buttikoferi DNA, 450 locus for SINE insertion analysis Length = 264 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cccaactacaacaacagaaa 199 |||||||||||||||||||| Sbjct: 29 cccaactacaacaacagaaa 10
>emb|AL928731.11| Mouse DNA sequence from clone RP23-171N20 on chromosome X, complete sequence Length = 114243 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gttcttttcttgctgcctca 491 |||||||||||||||||||| Sbjct: 55400 gttcttttcttgctgcctca 55381
>emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 852C13 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 222730 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 acctgacttaactgaagagg 588 |||||||||||||||||||| Sbjct: 18683 acctgacttaactgaagagg 18664
>emb|CT025573.9| Mouse DNA sequence from clone RP24-274P18 on chromosome 17, complete sequence Length = 210893 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 gcaaagaagaacaaagcaattttc 114 |||||||||||| ||||||||||| Sbjct: 102113 gcaaagaagaacgaagcaattttc 102090
>emb|AL663048.12| Mouse DNA sequence from clone RP23-166N12 on chromosome X, complete sequence Length = 234817 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gtagaaagtgaaaagtgttt 396 |||||||||||||||||||| Sbjct: 224008 gtagaaagtgaaaagtgttt 223989
>emb|AL833797.6| Mouse DNA sequence from clone RP23-89B11 on chromosome 2, complete sequence Length = 165400 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 caatagctagatagaaaagg 220 |||||||||||||||||||| Sbjct: 3460 caatagctagatagaaaagg 3479
>emb|AL732413.4| Mouse DNA sequence from clone RP23-366N13 on chromosome 2, complete sequence Length = 111921 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 aacaacagaaaacaatagctagat 212 ||||||||||||||||||| |||| Sbjct: 10764 aacaacagaaaacaatagccagat 10741 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,298,562 Number of Sequences: 3902068 Number of extensions: 6298562 Number of successful extensions: 134670 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 134273 Number of HSP's gapped (non-prelim): 394 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
