>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  178 bits (451), Expect(2) = 4e-64
 Identities = 87/87 (100%), Positives = 87/87 (100%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV
Sbjct: 341 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 400

Query: 365 QLADTYMSQAALGDANQDAMKTGSFYG 285
           QLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 401 QLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 4e-64
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -1

Query: 237 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 124
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  137 bits (345), Expect(2) = 2e-46
 Identities = 66/87 (75%), Positives = 77/87 (88%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRV
Sbjct: 351 RVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRV 410

Query: 365 QLADTYMSQAALGDANQDAMKTGSFYG 285
           QLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 411 QLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 2e-46
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -1

Query: 237 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 124
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  138 bits (347), Expect(2) = 3e-46
 Identities = 64/87 (73%), Positives = 76/87 (87%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRV
Sbjct: 351 RVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRV 410

Query: 365 QLADTYMSQAALGDANQDAMKTGSFYG 285
           QLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 411 QLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 3e-46
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -1

Query: 240 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 124
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  139 bits (350), Expect(2) = 9e-46
 Identities = 63/87 (72%), Positives = 78/87 (89%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRV
Sbjct: 349 RVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRV 408

Query: 365 QLADTYMSQAALGDANQDAMKTGSFYG 285
           QLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 409 QLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 9e-46
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -1

Query: 237 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 130
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  154 bits (388), Expect = 2e-37
 Identities = 71/87 (81%), Positives = 80/87 (91%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRV
Sbjct: 338 RVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRV 397

Query: 365 QLADTYMSQAALGDANQDAMKTGSFYG 285
           QLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 398 QLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  153 bits (386), Expect = 3e-37
 Identities = 71/87 (81%), Positives = 81/87 (93%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRV
Sbjct: 341 RVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRV 400

Query: 365 QLADTYMSQAALGDANQDAMKTGSFYG 285
           QLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 401 QLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  147 bits (371), Expect = 2e-35
 Identities = 67/87 (77%), Positives = 80/87 (91%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRV
Sbjct: 351 RVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRV 410

Query: 365 QLADTYMSQAALGDANQDAMKTGSFYG 285
           QLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 411 QLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  145 bits (365), Expect = 9e-35
 Identities = 65/86 (75%), Positives = 80/86 (93%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRV
Sbjct: 347 RVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRV 406

Query: 365 QLADTYMSQAALGDANQDAMKTGSFY 288
           QLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 407 QLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  140 bits (354), Expect = 2e-33
 Identities = 64/85 (75%), Positives = 78/85 (91%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRV
Sbjct: 351 RVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRV 410

Query: 365 QLADTYMSQAALGDANQDAMKTGSF 291
           QLAD YMS+AALGDANQDA+K G+F
Sbjct: 411 QLADKYMSEAALGDANQDAIKRGTF 435

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  139 bits (351), Expect = 4e-33
 Identities = 67/85 (78%), Positives = 76/85 (89%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRV
Sbjct: 355 RVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRV 414

Query: 365 QLADTYMSQAALGDANQDAMKTGSF 291
           QLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 415 QLAETYLKEAALGDANADAINTGNF 439

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  139 bits (351), Expect = 4e-33
 Identities = 66/86 (76%), Positives = 75/86 (87%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRV
Sbjct: 355 RVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRV 414

Query: 365 QLADTYMSQAALGDANQDAMKTGSFY 288
           QLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 415 QLADKYLKEAALGDANADAINNGSFF 440

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  139 bits (350), Expect = 5e-33
 Identities = 66/83 (79%), Positives = 76/83 (91%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRV
Sbjct: 350 RVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRV 409

Query: 365 QLADTYMSQAALGDANQDAMKTG 297
           QLA+TY+ +AALGDAN DA+ TG
Sbjct: 410 QLAETYLKEAALGDANADAINTG 432

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  133 bits (334), Expect = 4e-31
 Identities = 58/86 (67%), Positives = 79/86 (91%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRV
Sbjct: 353 RVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRV 412

Query: 365 QLADTYMSQAALGDANQDAMKTGSFY 288
           QLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 413 QLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  132 bits (332), Expect = 6e-31
 Identities = 58/86 (67%), Positives = 78/86 (90%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRV
Sbjct: 355 RVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRV 414

Query: 365 QLADTYMSQAALGDANQDAMKTGSFY 288
           QLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 415 QLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV
Sbjct: 348 RVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRV 407

Query: 365 QL 360
           +L
Sbjct: 408 KL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 38/72 (52%), Positives = 51/72 (70%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           RVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRV
Sbjct: 324 RVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRV 382

Query: 365 QLADTYMSQAAL 330
           QLAD Y+S A L
Sbjct: 383 QLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 25/66 (37%), Positives = 42/66 (63%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  
Sbjct: 224 RIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETS 283

Query: 365 QLADTY 348
           QL D Y
Sbjct: 284 QLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 24/66 (36%), Positives = 40/66 (60%)
 Frame = -2

Query: 545 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 366
           R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V   
Sbjct: 224 RIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNS 283

Query: 365 QLADTY 348
           QL D Y
Sbjct: 284 QLVDEY 289

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -2

Query: 455 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 300
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 299 GSFYG*KILHTHPPSLAA 246
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -2

Query: 467 RDGPVTFEQPKMTVEK 420
           R+GP TFEQP MT+EK
Sbjct: 17  REGPPTFEQPAMTIEK 32

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -2

Query: 455 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 300
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 299 GSFYG*KILHTHPPSLAA 246
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 352 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 456
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -2

Query: 518 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 411
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)|
          Length = 462

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
 Frame = -2

Query: 455 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 300
           VTF    +T E K +E  H  + E         NVK V + D      A    N   M+ 
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 299 GSFYG*KILHTHPPSLAA 246
           GSF    I+  HP  + A
Sbjct: 338 GSFTAQVIILNHPGQIGA 355

>TFE2_XENLA (Q01978) Transcription factor E2-alpha (Transcription factor|
           XE12/XE47)
          Length = 658

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = -1

Query: 297 FLLRLENSPYTPTI--SCCIGGGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGS 139
           F L + N    PT   S   GGG G ++ T   P G  D N   +D      DG+
Sbjct: 26  FPLPVANGKTRPTTLASTQFGGGSGLEERTGSAPWGTEDHNGSTFDQGRGYGDGT 80

>EF1A3_XENLA (P17508) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1)|
           (EF-1AO1)
          Length = 461

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -2

Query: 455 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 300
           VTF    +T E K +E  H  + E         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALVEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 299 GSFYG*KILHTHPPSLAA 246
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>PBPB_BACSU (Q07868) Penicillin-binding protein 2B (PBP-2B)|
          Length = 716

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 536 DDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPK 435
           D+E  +  G+ G+E +  + +  RDG VT+E  K
Sbjct: 186 DEETNEISGAMGLEKVLDKYLKERDGYVTYESDK 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,687,854
Number of Sequences: 219361
Number of extensions: 1497081
Number of successful extensions: 4489
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4487
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)