ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63n01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016521.1| Zea mays clone Contig354 mRNA sequence Length = 1275 Score = 139 bits (70), Expect = 1e-29 Identities = 138/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 429 catcagcggtccactggtcaccaccccattggccagcagctgcggcgtaatcagtgattg 488 |||||| ||||||||||||||| ||||| || | ||||| | ||||||||||| || Sbjct: 889 catcagaggtccactggtcaccgccccactg---atcagctccttggtaatcagtgactg 833 Query: 489 cagtatactctggggctccagcagcttcatcctcctgctccttggcttcctcagggtccc 548 ||| | |||| ||||| |||||||||| |||||||||||||| |||||||| ||||| | Sbjct: 832 cagcaaactcaggggccgcagcagcttcctcctcctgctcctttgcttcctctgggtctc 773 Query: 549 tgtagaagaacagatcaaccatgacatcccacttgtgccc 588 ||||||||||||||||||||||||| |||||||||||||| Sbjct: 772 tgtagaagaacagatcaaccatgacttcccacttgtgccc 733
>gb|BT016485.1| Zea mays clone Contig318 mRNA sequence Length = 1267 Score = 139 bits (70), Expect = 1e-29 Identities = 138/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 429 catcagcggtccactggtcaccaccccattggccagcagctgcggcgtaatcagtgattg 488 |||||| ||||||||||||||||||||| || | ||||| | |||||||||||||| Sbjct: 850 catcagaggtccactggtcaccaccccactg---atcagctccttggtaatcagtgattg 794 Query: 489 cagtatactctggggctccagcagcttcatcctcctgctccttggcttcctcagggtccc 548 | | | |||| ||||| |||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 793 cggcaaactcaggggcaacagcagcttcctcctcctgctcctttgcttcctctgggtccc 734 Query: 549 tgtagaagaacagatcaaccatgacatcccacttgtgccc 588 |||||||||||| ||| |||||||| |||||||||||||| Sbjct: 733 tgtagaagaacaaatccaccatgacctcccacttgtgccc 694
>gb|AY103617.1| Zea mays PCO143386 mRNA sequence Length = 1516 Score = 139 bits (70), Expect = 1e-29 Identities = 138/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 429 catcagcggtccactggtcaccaccccattggccagcagctgcggcgtaatcagtgattg 488 |||||| ||||||||||||||| ||||| || | ||||| | ||||||||||| || Sbjct: 928 catcagaggtccactggtcaccgccccactg---atcagctccttggtaatcagtgactg 872 Query: 489 cagtatactctggggctccagcagcttcatcctcctgctccttggcttcctcagggtccc 548 ||| | |||| ||||| |||||||||| |||||||||||||| |||||||| ||||| | Sbjct: 871 cagcaaactcaggggccgcagcagcttcctcctcctgctcctttgcttcctctgggtctc 812 Query: 549 tgtagaagaacagatcaaccatgacatcccacttgtgccc 588 ||||||||||||||||||||||||| |||||||||||||| Sbjct: 811 tgtagaagaacagatcaaccatgacctcccacttgtgccc 772
>gb|BT016624.1| Zea mays clone Contig457 mRNA sequence Length = 1418 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 475 gtaatcagtgattgcagtatactctggggctccagcagcttcatcctcctgctccttggc 534 ||||||||||||||| | | |||| ||||| | |||||||| |||||||||||||| || Sbjct: 798 gtaatcagtgattgcggcaaactcaggggccgcggcagcttcctcctcctgctcctttgc 739 Query: 535 ttcctcagggtccctgtagaagaacagatcaaccatgacatcccacttgtgccc 588 |||||| ||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 738 ttcctctgggtctctgtagaagaacagatcgaccatgacttcccacttgtgccc 685
>ref|XM_479167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1280 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 753 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaaccatga 694 Query: 573 catcccacttgtg 585 ||||||||||||| Sbjct: 693 catcccacttgtg 681
>ref|XM_507392.1| PREDICTED Oryza sativa (japonica cultivar-group), B1056G08.113 mRNA Length = 1298 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 755 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaaccatga 696 Query: 573 catcccacttgtg 585 ||||||||||||| Sbjct: 695 catcccacttgtg 683
>ref|XM_507391.1| PREDICTED Oryza sativa (japonica cultivar-group), B1056G08.113 mRNA Length = 1310 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 756 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaaccatga 697 Query: 573 catcccacttgtg 585 ||||||||||||| Sbjct: 696 catcccacttgtg 684
>ref|XM_506471.2| PREDICTED Oryza sativa (japonica cultivar-group), B1056G08.113 mRNA Length = 1343 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 758 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaaccatga 699 Query: 573 catcccacttgtg 585 ||||||||||||| Sbjct: 698 catcccacttgtg 686
>dbj|AK105968.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E10, full insert sequence Length = 1298 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 755 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaaccatga 696 Query: 573 catcccacttgtg 585 ||||||||||||| Sbjct: 695 catcccacttgtg 683
>dbj|AK103952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F07, full insert sequence Length = 1280 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 753 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaaccatga 694 Query: 573 catcccacttgtg 585 ||||||||||||| Sbjct: 693 catcccacttgtg 681
>dbj|AK102735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C12, full insert sequence Length = 1342 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 757 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaaccatga 698 Query: 573 catcccacttgtg 585 ||||||||||||| Sbjct: 697 catcccacttgtg 685
>dbj|AK058308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H07, full insert sequence Length = 1310 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 756 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaaccatga 697 Query: 573 catcccacttgtg 585 ||||||||||||| Sbjct: 696 catcccacttgtg 684
>ref|XM_470555.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccat 570 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 663 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaaccat 604 Query: 571 gacatcccacttgtg 585 |||||||||||||| Sbjct: 603 aacatcccacttgtg 589
>dbj|AK104842.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F12, full insert sequence Length = 1310 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccat 570 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 747 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaaccat 688 Query: 571 gacatcccacttgtg 585 |||||||||||||| Sbjct: 687 aacatcccacttgtg 673 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 238 cctagtctactcccagccttgagcagcgggttg 270 ||||| ||| ||||||||||||||||| ||||| Sbjct: 1008 cctagcctaatcccagccttgagcagctggttg 976
>dbj|AK104620.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F12, full insert sequence Length = 1276 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccat 570 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 747 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaaccat 688 Query: 571 gacatcccacttgtg 585 |||||||||||||| Sbjct: 687 aacatcccacttgtg 673 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 238 cctagtctactcccagccttgagcagcgggttg 270 ||||| ||| ||||||||||||||||| ||||| Sbjct: 1008 cctagcctaatcccagccttgagcagctggttg 976
>dbj|AK104286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D06, full insert sequence Length = 1223 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccat 570 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 747 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaaccat 688 Query: 571 gacatcccacttgtg 585 |||||||||||||| Sbjct: 687 aacatcccacttgtg 673 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 238 cctagtctactcccagccttgagcagcgggttg 270 ||||| ||| ||||||||||||||||| ||||| Sbjct: 1008 cctagcctaatcccagccttgagcagctggttg 976
>dbj|AK070905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065M10, full insert sequence Length = 1320 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccat 570 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 757 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaaccat 698 Query: 571 gacatcccacttgtg 585 |||||||||||||| Sbjct: 697 aacatcccacttgtg 683 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 238 cctagtctactcccagccttgagcagcgggttg 270 ||||| ||| ||||||||||||||||| ||||| Sbjct: 1018 cctagcctaatcccagccttgagcagctggttg 986
>dbj|AK066899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K05, full insert sequence Length = 1182 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccat 570 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 695 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaaccat 636 Query: 571 gacatcccacttgtg 585 |||||||||||||| Sbjct: 635 aacatcccacttgtg 621 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 238 cctagtctactcccagccttgagcagcgggttg 270 ||||| ||| ||||||||||||||||| ||||| Sbjct: 956 cctagcctaatcccagccttgagcagctggttg 924
>dbj|AK061289.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A03, full insert sequence Length = 1144 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccat 570 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 668 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaaccat 609 Query: 571 gacatcccacttgtg 585 |||||||||||||| Sbjct: 608 aacatcccacttgtg 594 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 238 cctagtctactcccagccttgagcagcgggttg 270 ||||| ||| ||||||||||||||||| ||||| Sbjct: 929 cctagcctaatcccagccttgagcagctggttg 897
>dbj|AK109430.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H04, full insert sequence Length = 1264 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 518 tcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatgacatcc 577 |||||||||||||| |||||||| || || || || ||||| |||||||||||||||||| Sbjct: 749 tcctcctgctccttagcttcctctggatctctataaaagaaaagatcaaccatgacatcc 690 Query: 578 cacttgtgccc 588 ||||||||||| Sbjct: 689 cacttgtgccc 679
>dbj|AK102347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C12, full insert sequence Length = 1176 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 518 tcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatgacatcc 577 |||||||||||||| |||||||| || || || || ||||| |||||||||||||||||| Sbjct: 752 tcctcctgctccttagcttcctctggatctctataaaagaaaagatcaaccatgacatcc 693 Query: 578 cacttgtgccc 588 ||||||||||| Sbjct: 692 cacttgtgccc 682
>dbj|AK060322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F12, full insert sequence Length = 1245 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 518 tcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatgacatcc 577 |||||||||||||| |||||||| || || || || ||||| |||||||||||||||||| Sbjct: 755 tcctcctgctccttagcttcctctggatctctataaaagaaaagatcaaccatgacatcc 696 Query: 578 cacttgtgccc 588 ||||||||||| Sbjct: 695 cacttgtgccc 685
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaacc 568 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct: 4319228 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaacc 4319285 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 238 cctagtctactcccagccttgagcagcgggttg 270 ||||| ||| ||||||||||||||||| ||||| Sbjct: 4318716 cctagcctaatcccagccttgagcagctggttg 4318748
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaacc 568 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct: 107269 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaacc 107212 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 238 cctagtctactcccagccttgagcagcgggttg 270 ||||| ||| ||||||||||||||||| ||||| Sbjct: 107781 cctagcctaatcccagccttgagcagctggttg 107749
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 511 agcttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaacc 568 |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct: 4319343 agcttcctcctcctgctccttggcctcctcagggtctctgtagaaaaacagatcaacc 4319400 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 238 cctagtctactcccagccttgagcagcgggttg 270 ||||| ||| ||||||||||||||||| ||||| Sbjct: 4318831 cctagcctaatcccagccttgagcagctggttg 4318863
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaacc 568 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 25360604 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 25360659 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 accatgacatcccacttgtg 585 |||||||||||||||||||| Sbjct: 25360746 accatgacatcccacttgtg 25360765
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaacc 568 |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 53694 cttcttcctcttgctccttcgcttcctctgggtccctgtagaagaacagatcaacc 53749 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 accatgacatcccacttgtg 585 |||||||||||||||||||| Sbjct: 53836 accatgacatcccacttgtg 53855
>gb|AF097522.1|AF097522 Brassica napus laminin receptor-like protein (LRP) mRNA, complete cds Length = 1138 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 674 tcctcgggctccctgtagaagaacagatcaaccatgacatcccactt 628
>ref|NM_001036190.1| Arabidopsis thaliana P40; structural constituent of ribosome AT1G72370 (P40) transcript variant AT1G72370.2 mRNA, complete cds Length = 1173 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 723 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 677
>ref|NM_105896.2| Arabidopsis thaliana P40; structural constituent of ribosome AT1G72370 (P40) transcript variant AT1G72370.1 mRNA, complete cds Length = 1185 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 723 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 677
>gb|BT000421.1| Arabidopsis thaliana putative 40S ribosomal protein SA (laminin receptor-like protein) (At1g72370) mRNA, complete cds Length = 1032 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 638 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 592
>gb|AY136324.1| Arabidopsis thaliana putative 40S ribosomal protein SA (laminin receptor-like protein) (At1g72370) mRNA, complete cds Length = 1103 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 700 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 654
>gb|AY114561.1| Arabidopsis thaliana putative 40S ribosomal protein SA (laminin receptor-like protein) (At1g72370) mRNA, complete cds Length = 1042 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 638 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 592
>gb|AY079041.1| Arabidopsis thaliana At1g72370/T10D10_16 mRNA, complete cds Length = 897 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 638 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 592
>gb|AY065096.1| Arabidopsis thaliana putative 40S ribosomal protein SA (laminin receptor-like protein) (At1g72370; T10D10.16) mRNA, complete cds Length = 1151 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 720 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 674
>gb|AY058885.1| Arabidopsis thaliana At1g72370/T10D10_16 mRNA, complete cds Length = 1182 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 723 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 677
>gb|AY054211.1| Arabidopsis thaliana At1g72370/T10D10_16 mRNA, complete cds Length = 1168 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 703 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 657
>emb|BX817196.1|CNS0AD2L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH91ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1125 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 709 tcctcaggttccctgtaaaagaacagatcaaccatcacatcccactt 663
>emb|BX816779.1|CNS0AD9Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 707 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 661
>emb|BX815045.1|CNS0ACSY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS27ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 541 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 79 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 33
>emb|BX814998.1|CNS0AAO4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS23ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1126 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 693 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 647
>gb|AY087976.1| Arabidopsis thaliana clone 40091 mRNA, complete sequence Length = 1177 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 720 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 674
>gb|U01955.1|ATU01955 Arabidopsis thaliana Columbia laminin receptor-like protein mRNA, complete cds Length = 1137 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 692 tcctcaggttccctgtaaaagaacaggtcaaccatgacatcccactt 646
>gb|BT016512.1| Zea mays clone Contig345 mRNA sequence Length = 1208 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| |||||| ||| ||| |||||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 699 cttcttcctccagctgcttcgcttcctctgggtctctgtagaagaaaagatctaccatga 640 Query: 573 catcccacttgtg 585 ||||||||||| Sbjct: 639 tgtcccacttgtg 627
>gb|BT017775.1| Zea mays clone EL01N0502H12.c mRNA sequence Length = 903 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| |||||| ||| ||| |||||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 405 cttcttcctccagctgcttcgcttcctctgggtctctgtagaagaaaagatctaccatga 346 Query: 573 catcccacttgtg 585 ||||||||||| Sbjct: 345 tgtcccacttgtg 333
>gb|AY105034.1| Zea mays PCO130341 mRNA sequence Length = 1213 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 513 cttcatcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaaccatga 572 |||| |||||| ||| ||| |||||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 702 cttcttcctccagctgcttcgcttcctctgggtctctgtagaagaaaagatctaccatga 643 Query: 573 catcccacttgtg 585 ||||||||||| Sbjct: 642 tgtcccacttgtg 630
>emb|X69056.1|ATLRH A.thaliana mRNA for laminin receptor homologue Length = 1073 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccactt 582 |||||| | |||||||| |||||||| |||||||||||||||||||| Sbjct: 643 tcctcaagttccctgtaaaagaacaggtcaaccatgacatcccactt 597
>gb|AF020553.1|AF020553 Glycine max ribosome-associated protein p40 mRNA, complete cds Length = 1141 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 551 tagaagaacagatcaaccatgacatccca 579 ||||||||||||||||||||||||||||| Sbjct: 689 tagaagaacagatcaaccatgacatccca 661
>gb|DQ235174.1| Solanum tuberosum clone 156A02 P40-like protein mRNA, complete cds Length = 1061 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccacttg 583 |||||||| || ||||| ||||| ||||| |||||||||||||||||| Sbjct: 662 tcctcaggctctctgtaaaagaagagatccaccatgacatcccacttg 615
>ref|NM_111349.2| Arabidopsis thaliana RPSAB; structural constituent of ribosome AT3G04770 (RPSAB) transcript variant AT3G04770.2 mRNA, complete cds Length = 1124 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 545 tccctgtagaagaacagatcaaccatgacatccca 579 ||||||||||| |||||||| |||||||||||||| Sbjct: 663 tccctgtagaaaaacagatccaccatgacatccca 629
>gb|AY087423.1| Arabidopsis thaliana clone 35242 mRNA, complete sequence Length = 1027 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 545 tccctgtagaagaacagatcaaccatgacatccca 579 ||||||||||| |||||||| |||||||||||||| Sbjct: 665 tccctgtagaaaaacagatccaccatgacatccca 631
>gb|U66223.1|ATU66223 Arabidopsis thaliana p40 protein homolog mRNA, complete cds Length = 1105 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 545 tccctgtagaagaacagatcaaccatgacatccca 579 ||||||||||| |||||||| |||||||||||||| Sbjct: 644 tccctgtagaaaaacagatccaccatgacatccca 610
>dbj|AB012702.1| Daucus carota mRNA for P40-like protein, complete cds Length = 1111 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 527 tccttggcttcctcagggtccctgtagaagaacagatcaaccatgacatcccacttgtg 585 ||||||| ||||||||| || || || ||||||| ||||||||| || ||||||||||| Sbjct: 715 tccttggtttcctcaggctctctataaaagaacaaatcaaccatcacttcccacttgtg 657
>gb|DQ207864.1| Solanum tuberosum clone 081G01 ribosome-associated protein p40-like mRNA, complete cds Length = 1106 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 539 tcagggtccctgtagaagaacagatcaaccatgacatcccacttg 583 ||||| || ||||| ||||| ||||| |||||||||||||||||| Sbjct: 670 tcaggctctctgtaaaagaagagatccaccatgacatcccacttg 626
>gb|AY550956.1| Sparus aurata 40S ribosomal protein Sa-like protein mRNA, complete cds Length = 1039 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 539 tcagggtccctgtagaagaacagatcaaccatgacatccca 579 |||||||||||||||||| |||||||| |||||| ||||| Sbjct: 701 tcagggtccctgtagaagtacagatcaggcatgacctccca 661
>gb|U02370.1|UCU02370 Urechis caupo 34/67 kD laminin binding protein mRNA, complete cds Length = 1164 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 539 tcagggtccctgtagaagaacagatcaaccatgacatccca 579 |||||||||||||||||||||| || |||||||| ||||| Sbjct: 721 tcagggtccctgtagaagaacaagtcgaccatgacctccca 681
>gb|AC143340.4| Medicago truncatula clone mth2-7f4, complete sequence Length = 114535 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 518 tcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaacc 568 ||||| ||||||||||| || ||||| || || |||||||| ||||||||| Sbjct: 41436 tcctcttgctccttggcctcttcaggttctctatagaagaagagatcaacc 41486
>gb|AC139290.15| Medicago truncatula clone mth2-23f4, complete sequence Length = 127701 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 518 tcctcctgctccttggcttcctcagggtccctgtagaagaacagatcaacc 568 ||||| ||||||||||| || ||||| || || |||||||| ||||||||| Sbjct: 6956 tcctcttgctccttggcctcttcaggttctctatagaagaagagatcaacc 7006
>gb|AC121881.3| Mus musculus BAC clone RP24-134L8 from chromosome 8, complete sequence Length = 184359 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 524 tgctccttggcttcctcagggt 545 |||||||||||||||||||||| Sbjct: 56972 tgctccttggcttcctcagggt 56951
>ref|XM_791796.1| PREDICTED: Strongylocentrotus purpuratus similar to ubiquitin specific protease 37 (LOC592263), mRNA Length = 4068 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 517 atcctcctgctccttggcttcc 538 |||||||||||||||||||||| Sbjct: 3630 atcctcctgctccttggcttcc 3609
>emb|AJ006759.1|CAR6759 Cicer arietinum mRNA for ribosome-associated protein p40 Length = 1169 Score = 44.1 bits (22), Expect = 0.51 Identities = 63/76 (82%), Gaps = 3/76 (3%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcct---gctccttggcttcctcagggtccctgtagaagaacagat 563 ||||| |||||||||||| ||| |||||| || || || || ||||||||||| |||| Sbjct: 732 cagcaacttcatcctcctctggctgcttggcctcttcgggttctctgtagaagaatagat 673 Query: 564 caaccatgacatccca 579 | ||||| |||||||| Sbjct: 672 cgaccataacatccca 657
>gb|AY857457.1| Suberites domuncula SA mRNA, complete cds Length = 978 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 539 tcagggtccctgtagaagaaca 560 |||||||||||||||||||||| Sbjct: 623 tcagggtccctgtagaagaaca 602
>gb|AY312923.1| Timmia megapolitana trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 716 cagtagcagccgcaacaggag 696
>gb|AY312922.1| Tetraplodon mnioides trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1500 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 707 cagtagcagccgcaacaggag 687
>gb|AY312919.1| Scouleria aquatica trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1406 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 623 cagtagcagccgcaacaggag 603
>gb|AY312918.1| Rhodobryum giganteum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1488 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 710 cagtagcagccgcaacaggag 690
>gb|AY312911.1| Orthotrichum lyellii trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1448 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 679 cagtagcagccgcaacaggag 659
>gb|AY312909.1| Oedipodium griffithianum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1486 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 717 cagtagcagccgcaacaggag 697
>gb|AY312908.1| Mnium hornum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1455 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 675 cagtagcagccgcaacaggag 655
>gb|AY312905.1| Hedwigia ciliata trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1517 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 729 cagtagcagccgcaacaggag 709
>gb|AY312901.1| Entosthodon laevis trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1426 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 636 cagtagcagccgcaacaggag 616
>gb|AY312897.1| Buxbaumia aphylla trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1441 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 624 cagtagcagccgcaacaggag 604
>gb|AY312896.1| Brachythecium salebrosum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 698 cagtagcagccgcaacaggag 678
>gb|AY312894.1| Aulacomnium turgidum trnK-psbA intergenic spacer, partial sequence; photosystem II 32 kDa protein (psbA) gene, complete cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1493 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 718 cagtagcagccgcaacaggag 698
>ref|XM_799173.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein SA (Tc00.1047053510425.19) partial mRNA Length = 738 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccac 580 ||||||||||| | ||||||||| || || ||| ||||||||||| Sbjct: 635 tcctcagggtcgcggtagaagaagaggtccaccttgacatcccac 591
>ref|XM_799399.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein SA (Tc00.1047053503719.20) partial mRNA Length = 738 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccac 580 ||||||||||| | ||||||||| || || ||| ||||||||||| Sbjct: 635 tcctcagggtcgcggtagaagaagaggtccaccttgacatcccac 591
>ref|XM_800654.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein SA (Tc00.1047053509825.14) partial mRNA Length = 738 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccac 580 ||||||||||| | ||||||||| || || ||| ||||||||||| Sbjct: 635 tcctcagggtcgcggtagaagaagaggtccaccttgacatcccac 591
>gb|BC051413.1| Mus musculus calcium channel, voltage-dependent, alpha 1F subunit, mRNA (cDNA clone IMAGE:6493332), containing frame-shift errors Length = 6035 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 cacgccagcctcccagccagt 291 ||||||||||||||||||||| Sbjct: 1416 cacgccagcctcccagccagt 1436
>gb|BC043482.1| Mus musculus calcium channel, voltage-dependent, alpha 1F subunit, mRNA (cDNA clone IMAGE:5369391), containing frame-shift errors Length = 6636 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 cacgccagcctcccagccagt 291 ||||||||||||||||||||| Sbjct: 1843 cacgccagcctcccagccagt 1863
>ref|XM_800795.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein SA (Tc00.1047053503757.10) partial mRNA Length = 417 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccac 580 ||||||||||| | ||||||||| || || ||| ||||||||||| Sbjct: 314 tcctcagggtcgcggtagaagaagaggtccaccttgacatcccac 270
>emb|AL355490.24| Human DNA sequence from clone RP11-452K12 on chromosome 10 Contains the FRAT1 gene for frequently rearranged in advanced T-cell lymphomas, the FRAT2 gene for frequently rearranged in advanced T-cell lymphomas 2, two novel genes, the gene for a novel protein (FLJ12434,KIAA0690), the PGAM1 gene for phosphoglycerate mutase 1 (brain), the CSL4 gene for exosomal core protein CSL4, the ZDHHC16 gene for zinc finger, DHHC domain containing 16, the 3' end of the MMS19L gene for MMS19-like (MET18 homolog, S. cerevisiae), a ribosomal protein L12 (RPL12) pseudogene, a ribosomal protein L34 (RPL34) pseudogene and four CpG islands, complete sequence Length = 190803 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 aaaattaagacaggcaagttg 36 ||||||||||||||||||||| Sbjct: 188772 aaaattaagacaggcaagttg 188792
>gb|AY294643.1| Phalaris minor PsbA gene, partial cds; chloroplast gene for chloroplast product Length = 791 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 352 cagtagcagccgcaacaggag 332
>emb|AJ579852.2|MMU579852 Mus musculus mRNA for L-type dihydropyridine-sensitive calcium channel alpha-1f subunit (Cav1.4 gene), strain C57Bl6 Length = 5955 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 cacgccagcctcccagccagt 291 ||||||||||||||||||||| Sbjct: 1399 cacgccagcctcccagccagt 1419
>emb|AL954248.1| Pan troglodytes chromosome 22 clone PTB-061A04 map 22q22.3, complete sequence Length = 162730 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 catccaccatcaccaccagca 373 ||||||||||||||||||||| Sbjct: 30340 catccaccatcaccaccagca 30320
>gb|AC007622.28| Homo sapiens 12 BAC RP11-864J10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121700 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 352 ccatccaccatcaccaccagc 372 ||||||||||||||||||||| Sbjct: 73415 ccatccaccatcaccaccagc 73395
>gb|AY211527.2| Phalaris minor PsbA gene, partial cds; chloroplast gene for chloroplast product Length = 791 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 352 cagtagcagccgcaacaggag 332
>dbj|AK044695.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930034B14 product:calcium channel, voltage-dependent, alpha 1F subunit, full insert sequence Length = 2560 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 cacgccagcctcccagccagt 291 ||||||||||||||||||||| Sbjct: 1426 cacgccagcctcccagccagt 1446
>gb|BC057653.1| Mus musculus calcium channel, voltage-dependent, alpha 1F subunit, mRNA (cDNA clone IMAGE:4501329) Length = 3849 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 cacgccagcctcccagccagt 291 ||||||||||||||||||||| Sbjct: 2467 cacgccagcctcccagccagt 2487
>gb|AF363674.1|AF363674 Lolium perenne herbicide binding protein D1 (psbA) mRNA, partial cds; chloroplast gene for chloroplast product Length = 945 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 301 cagtagcagccgcaacaggag 281
>ref|XM_392950.2| PREDICTED: Apis mellifera similar to ENSANGP00000015216 (LOC409437), partial mRNA Length = 1554 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 450 caccccattggccagcagctgcggc 474 |||||||| |||||||||||||||| Sbjct: 322 caccccatcggccagcagctgcggc 298
>ref|NM_019582.1| Mus musculus calcium channel, voltage-dependent, alpha 1F subunit (Cacna1f), mRNA Length = 6114 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 cacgccagcctcccagccagt 291 ||||||||||||||||||||| Sbjct: 1447 cacgccagcctcccagccagt 1467
>gb|AF192497.1|AF192497 Mus musculus L-type dihydropyridine-sensitive calcium channel alpha-1f subunit (Cacna1f) mRNA, complete cds Length = 6114 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 cacgccagcctcccagccagt 291 ||||||||||||||||||||| Sbjct: 1447 cacgccagcctcccagccagt 1467
>gb|AY163147.1| Plagiobryum zieri photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1477 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 692 cagtagcagccgcaacaggag 672
>gb|AY163146.1| Haplodontium reticulatum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1493 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 718 cagtagcagccgcaacaggag 698
>gb|AY163145.1| Haplodontium megalocarpum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1482 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 717 cagtagcagccgcaacaggag 697
>gb|AY163144.1| Bryum ruderale photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1506 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163143.1| Bryum radiculosum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1514 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 728 cagtagcagccgcaacaggag 708
>gb|AY163142.1| Bryum pseudotriquetrum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1490 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 715 cagtagcagccgcaacaggag 695
>gb|AY163141.1| Bryum pachytheca photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1439 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 654 cagtagcagccgcaacaggag 634
>gb|AY163140.1| Bryum orthothecium photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1510 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 729 cagtagcagccgcaacaggag 709
>gb|AY163139.1| Bryum meesioides photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1377 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 721 cagtagcagccgcaacaggag 701
>gb|AY163138.1| Bryum lisae photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1433 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 652 cagtagcagccgcaacaggag 632
>gb|AY163137.1| Bryum gemmiferum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1429 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 641 cagtagcagccgcaacaggag 621
>gb|AY163136.1| Bryum funckii photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1494 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163135.1| Bryum donianum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1507 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 722 cagtagcagccgcaacaggag 702
>gb|AY163134.1| Bryum cyclophyllum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1504 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 718 cagtagcagccgcaacaggag 698
>gb|AY163133.1| Bryum coronatum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1477 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 720 cagtagcagccgcaacaggag 700
>gb|AY163132.1| Bryum clavatum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1481 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 720 cagtagcagccgcaacaggag 700
>gb|AY163131.1| Bryum cellulare photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1446 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 659 cagtagcagccgcaacaggag 639
>gb|AY163130.1| Bryum caucasicum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1424 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 636 cagtagcagccgcaacaggag 616
>gb|AY163128.1| Bryum caespiticium photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1458 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 679 cagtagcagccgcaacaggag 659
>gb|AY163127.1| Bryum bicolor photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1491 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163126.1| Bryum argenteum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1446 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 659 cagtagcagccgcaacaggag 639
>gb|AY163125.1| Bryum alpinum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1505 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163124.1| Bryum algovicum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1482 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 700 cagtagcagccgcaacaggag 680
>gb|AY163122.1| Brachymenium preissianum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1500 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 718 cagtagcagccgcaacaggag 698
>gb|AY163121.1| Brachymenium philonotula photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1504 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY163119.1| Brachymenium acuminatum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1509 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 721 cagtagcagccgcaacaggag 701
>gb|AY163118.1| Anomobryum prostratum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1505 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 721 cagtagcagccgcaacaggag 701
>gb|AY163117.1| Anomobryum julaceum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1511 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 726 cagtagcagccgcaacaggag 706
>gb|AY163116.1| Anomobryum humillimum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1446 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 676 cagtagcagccgcaacaggag 656
>gb|AY163115.1| Anomobryum conicum photosystem II protein gene, complete cds; chloroplast gene for chloroplast product Length = 1496 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 719 cagtagcagccgcaacaggag 699
>gb|AY974244.1| Homo sapiens MMS19-like (MET18 homolog, S. cerevisiae) (MMS19L) gene, complete cds Length = 42517 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 aaaattaagacaggcaagttg 36 ||||||||||||||||||||| Sbjct: 12774 aaaattaagacaggcaagttg 12754
>gb|AY562223.2| Plagiomnium ellipticum psbA-trnK intergenic spacer, partial sequence; photosystem II protein D1 (psbA) gene, complete cds; and psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 1407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 683 cagtagcagccgcaacaggag 663
>gb|AY562221.2| Plagiomnium insigne psbA-trnK intergenic spacer, partial sequence; photosystem II protein D1 (psbA) gene, complete cds; and psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 1407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 683 cagtagcagccgcaacaggag 663
>gb|AY562222.2| Plagiomnium medium psbA-trnK intergenic spacer, partial sequence; photosystem II protein D1 (psbA) gene, complete cds; and psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 1407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 683 cagtagcagccgcaacaggag 663
>gb|AF133210.1|AF133210 Trypanosoma cruzi laminin receptor precursor-like protein/ p40 ribosome associated-like protein gene, complete cds Length = 897 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 536 tcctcagggtccctgtagaagaacagatcaaccatgacatcccac 580 ||||||||||| | ||||||||| || || ||| ||||||||||| Sbjct: 686 tcctcagggtcgcggtagaagaagaggtccaccttgacatcccac 642
>gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete sequence Length = 136080 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ctggtcaccaccccattggcc 462 ||||||||||||||||||||| Sbjct: 79472 ctggtcaccaccccattggcc 79492
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 cagtagcagccgcaacaggag 308 ||||||||||||||||||||| Sbjct: 53815 cagtagcagccgcaacaggag 53835
>dbj|AB062685.1| Bombyx mori mRNA for ribosome-associated protein P40, complete cds Length = 1097 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 539 tcagggtccctgtagaagaacagatcaaccatgacatccca 579 |||||||| | ||||||||||| |||||||| |||||||| Sbjct: 666 tcagggtcacggtagaagaacaaatcaaccacaacatccca 626
>ref|NM_001024580.1| Gallus gallus vitrin (VIT), mRNA Length = 2790 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cccatccaccatcaccacca 370 |||||||||||||||||||| Sbjct: 1472 cccatccaccatcaccacca 1453
>ref|XM_525845.1| PREDICTED: Pan troglodytes similar to UDP-glucuronate decarboxylase 1 (LOC470464), mRNA Length = 2829 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 63 cagcagcttcatcctcctgc 44
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 92873 ccaccatcaccaccagcaac 92892
>gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, complete sequence Length = 227074 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cattcatgcctcacaaaata 201 |||||||||||||||||||| Sbjct: 218715 cattcatgcctcacaaaata 218734
>ref|XM_614676.2| PREDICTED: Bos taurus similar to UDP-glucuronate decarboxylase 1 (LOC534788), mRNA Length = 1263 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 63 cagcagcttcatcctcctgc 44
>ref|XM_418225.1| PREDICTED: Gallus gallus similar to KIAA0963 protein (LOC420104), mRNA Length = 4591 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 tgctccttggcttcctcagg 543 |||||||||||||||||||| Sbjct: 3732 tgctccttggcttcctcagg 3713
>gb|AC161765.5| Mus musculus BAC clone RP23-85I5 from chromosome 8, complete sequence Length = 219629 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 15569 ccaccatcaccaccagcaac 15588
>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence Length = 234127 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cagtctccctctccctcatc 80 |||||||||||||||||||| Sbjct: 96968 cagtctccctctccctcatc 96987
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence Length = 190937 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 165413 ccaccatcaccaccagcaac 165394
>ref|XM_658752.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6240.2) partial mRNA Length = 903 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 caccaccagcaactggagct 382 |||||||||||||||||||| Sbjct: 15 caccaccagcaactggagct 34
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ccatcaccaccagcaactgg 378 |||||||||||||||||||| Sbjct: 1410941 ccatcaccaccagcaactgg 1410960
>ref|XM_390640.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10464.1) partial mRNA Length = 7836 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 ctcctgctccttggcttcct 539 |||||||||||||||||||| Sbjct: 5772 ctcctgctccttggcttcct 5791
>gb|AC132576.3| Mus musculus BAC clone RP24-444F2 from chromosome 16, complete sequence Length = 135862 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 72289 ccaccatcaccaccagcaac 72308
>gb|AY145052.1| Rattus norvegicus seryl-aminoacyl-tRNA synthetase BLES02 mRNA, partial cds Length = 533 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ccatccaccatcaccaccag 371 |||||||||||||||||||| Sbjct: 21 ccatccaccatcaccaccag 2
>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete sequence Length = 162693 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 143066 ccaccatcaccaccagcaac 143047
>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence Length = 235023 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cagtctccctctccctcatc 80 |||||||||||||||||||| Sbjct: 70888 cagtctccctctccctcatc 70869
>gb|AC108942.4| Mus musculus BAC clone RP23-7M11 from 18, complete sequence Length = 223041 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 184443 ccaccatcaccaccagcaac 184462
>ref|NM_025076.3| Homo sapiens UDP-glucuronate decarboxylase 1 (UXS1), mRNA Length = 2132 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 161 cagcagcttcatcctcctgc 142
>gb|AC073486.5| Homo sapiens BAC clone RP11-807H17 from 7, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tctccctctccctcatccca 83 |||||||||||||||||||| Sbjct: 55024 tctccctctccctcatccca 55043
>gb|AY358541.1| Homo sapiens clone DNA111750 UXS1 (UNQ2538) mRNA, complete cds Length = 2024 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 112 cagcagcttcatcctcctgc 93
>gb|AC102225.9| Mus musculus chromosome 18, clone RP24-406O24, complete sequence Length = 208106 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 120901 ccaccatcaccaccagcaac 120882
>gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, complete sequence Length = 186799 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 aacttataacacaactttca 62 |||||||||||||||||||| Sbjct: 141198 aacttataacacaactttca 141179
>emb|AL512503.14| Human DNA sequence from clone RP11-323K8 on chromosome 1 Contains part of the NOTCH2 gene for Notch homolog 2 (Drosophila), complete sequence Length = 109612 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 taatcagtgattgcagtata 495 |||||||||||||||||||| Sbjct: 5704 taatcagtgattgcagtata 5685
>emb|AL133413.5| Human DNA sequence from clone RP11-54K22 on chromosome 9q34.11-34.2 Contains a NADH dehydrogenase 3, mitochondrial (MTND3) pseudogene, complete sequence Length = 157790 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gtctccctctccctcatccc 82 |||||||||||||||||||| Sbjct: 73685 gtctccctctccctcatccc 73666
>emb|AL020991.1|HS884M20 Human DNA sequence from clone RP5-884M20 on chromosome Xp11.21 Contains the ALAS2 gene for aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia), the APEX2 gene for APEX nuclease (apurinic/apyrimidinic endonuclease) 2, the 5' end of the PFKFB1 gene for 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 and a CpG island, complete sequence Length = 114173 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gtctccctctccctcatccc 82 |||||||||||||||||||| Sbjct: 102803 gtctccctctccctcatccc 102784
>emb|AJ401088.1|GGA401088 Gallus gallus mRNA for MOX-2 protein Length = 1891 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 265 ccaccatcaccaccagcaac 284
>emb|AL645985.30| Mouse DNA sequence from clone DN-240H8 on chromosome 3 Contains part of a novel gene, a ribosomal protein L36 (Rpl36) pseudogene and a pseudogene similar to part of ribosomal protein S2 (Rps2), complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 122980 ccaccatcaccaccagcaac 122961
>dbj|AK122696.1| Homo sapiens cDNA FLJ16164 fis, clone BRCAN2027150 Length = 1988 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 126 cagcagcttcatcctcctgc 107
>dbj|AK075170.1| Homo sapiens cDNA FLJ90689 fis, clone PLACE1006219, weakly similar to PUTATIVE UDP-GLUCOSE 4-EPIMERASE (EC 5.1.3.2) Length = 2049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 123 cagcagcttcatcctcctgc 104
>dbj|AK075120.1| Homo sapiens cDNA FLJ90639 fis, clone PLACE1003845, highly similar to UDP-glucuronate decarboxylase 1 Length = 2037 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 123 cagcagcttcatcctcctgc 104
>emb|CR592836.1| full-length cDNA clone CS0DI087YJ08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1758 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 101 cagcagcttcatcctcctgc 82
>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence Length = 185624 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 atcctaaaacacaagttttt 138 |||||||||||||||||||| Sbjct: 65483 atcctaaaacacaagttttt 65464
>gb|AC100840.2| Homo sapiens chromosome 15, clone RP11-537K8, complete sequence Length = 174287 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 acaaaattaagacaggcaag 33 |||||||||||||||||||| Sbjct: 111927 acaaaattaagacaggcaag 111946
>gb|AC021541.7| Homo sapiens chromosome 15, clone RP11-505L16, complete sequence Length = 194023 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 acaaaattaagacaggcaag 33 |||||||||||||||||||| Sbjct: 156768 acaaaattaagacaggcaag 156749
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete sequence Length = 219580 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tctccctctccctcatccca 83 |||||||||||||||||||| Sbjct: 182651 tctccctctccctcatccca 182670
>gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome 13, complete sequence Length = 200650 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 caccatcaccaccagcaact 376 |||||||||||||||||||| Sbjct: 137653 caccatcaccaccagcaact 137634
>dbj|AB185956.1| Gallus gallus AKH mRNA for Akhirin, complete cds Length = 2790 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cccatccaccatcaccacca 370 |||||||||||||||||||| Sbjct: 1472 cccatccaccatcaccacca 1453
>gb|AC154770.2| Mus musculus BAC clone RP24-448C20 from chromosome 16, complete sequence Length = 196851 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 90226 ccaccatcaccaccagcaac 90207
>gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, complete sequence Length = 170801 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 164963 cagcagcttcatcctcctgc 164982
>gb|AC084445.1|AC084445 Caenorhabditis briggsae cosmid CB018A07, complete sequence Length = 62584 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 catctagaaaatcctaaaac 128 |||||||||||||||||||| Sbjct: 25907 catctagaaaatcctaaaac 25888
>ref|NM_001007606.1| Rattus norvegicus seryl-aminoacyl-tRNA synthetase 1 (Sars1), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ccatccaccatcaccaccag 371 |||||||||||||||||||| Sbjct: 594 ccatccaccatcaccaccag 575
>gb|AC024902.54| Homo sapiens 12 BAC RP11-684O24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167113 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 ccccattggccagcagctgc 471 |||||||||||||||||||| Sbjct: 83586 ccccattggccagcagctgc 83605
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ggggctccagcagcttcatc 519 |||||||||||||||||||| Sbjct: 1276092 ggggctccagcagcttcatc 1276111
>emb|Z83821.1|HS296K21 Human DNA sequence from clone RP1-296K21 on chromosome Xq13, complete sequence Length = 111994 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gtctccctctccctcatccc 82 |||||||||||||||||||| Sbjct: 101290 gtctccctctccctcatccc 101271
>gb|BC009819.2| Homo sapiens UDP-glucuronate decarboxylase 1, mRNA (cDNA clone MGC:14862 IMAGE:3843312), complete cds Length = 2031 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 102 cagcagcttcatcctcctgc 83
>gb|BC061765.1| Rattus norvegicus seryl-aminoacyl-tRNA synthetase 1, mRNA (cDNA clone MGC:72629 IMAGE:5620893), complete cds Length = 1920 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ccatccaccatcaccaccag 371 |||||||||||||||||||| Sbjct: 594 ccatccaccatcaccaccag 575
>emb|Z78198.1|CEF55C5 Caenorhabditis elegans Cosmid F55C5, complete sequence Length = 40553 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 atccaccatcaccaccagca 373 |||||||||||||||||||| Sbjct: 36968 atccaccatcaccaccagca 36987
>gb|AC102209.11| Mus musculus chromosome 3, clone RP24-280F5, complete sequence Length = 170723 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 110106 ccaccatcaccaccagcaac 110125
>ref|NM_001005427.1| Gallus gallus mesenchyme homeobox 2 (MEOX2), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 265 ccaccatcaccaccagcaac 284
>emb|AL591388.9| Zebrafish DNA sequence from clone BUSM1-255P14 in linkage group 7, complete sequence Length = 97239 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tctccctctccctcatcccaatgt 87 ||||||||||||| |||||||||| Sbjct: 48409 tctccctctcccttatcccaatgt 48386
>gb|AF030429.1|AF030429 Canis familiaris dentatorubro-pallidoluysian atrophy protein (DRPLA) gene, exon 5 and partial cds Length = 324 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 72 ccaccatcaccaccagcaac 91
>emb|AL669913.15| Mouse DNA sequence from clone RP23-479C2 on chromosome 2, complete sequence Length = 184221 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 gacaggcaagttgaaagcca 43 |||||||||||||||||||| Sbjct: 37540 gacaggcaagttgaaagcca 37559
>emb|CR936437.14| Zebrafish DNA sequence from clone CH211-197I23 in linkage group 3, complete sequence Length = 96056 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tctccctctccctcatcccaatgt 87 ||||||||||||| |||||||||| Sbjct: 78501 tctccctctcccttatcccaatgt 78478
>emb|AL845519.6| Mouse DNA sequence from clone RP23-295F2 on chromosome 2, complete sequence Length = 164578 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cagtctccctctccctcatc 80 |||||||||||||||||||| Sbjct: 36981 cagtctccctctccctcatc 36962
>gb|AY147934.1| Homo sapiens UDP-glucuronic acid decarboxylase mRNA, complete cds Length = 2077 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cagcagcttcatcctcctgc 526 |||||||||||||||||||| Sbjct: 128 cagcagcttcatcctcctgc 109
>emb|AL606749.13| Mouse DNA sequence from clone RP23-325J22 on chromosome 3, complete sequence Length = 89111 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ccaccatcaccaccagcaac 375 |||||||||||||||||||| Sbjct: 81163 ccaccatcaccaccagcaac 81144 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,988,740 Number of Sequences: 3902068 Number of extensions: 5988740 Number of successful extensions: 233325 Number of sequences better than 10.0: 186 Number of HSP's better than 10.0 without gapping: 186 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 232666 Number of HSP's gapped (non-prelim): 658 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
