ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63m23 |
|---|---|
| Clone Library Name | barley_pub |
>SECA_PORPU (P51381) Preprotein translocase secA subunit| Length = 884 Score = 60.5 bits (145), Expect = 4e-09 Identities = 29/70 (41%), Positives = 42/70 (60%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 IR +E+ LL+ +D WKDHL M L A+ RS+G ++PL EYK + FI M++ Sbjct: 807 IRQLEKYYLLQQIDNAWKDHLQKMGALRDAIGWRSYGQQDPLVEYKNEAFNLFIEMITHV 866 Query: 414 RRLTVEALLR 385 + V A+LR Sbjct: 867 KHTVVYAILR 876
>SECA_HAEIN (P43803) Preprotein translocase secA subunit| Length = 901 Score = 60.5 bits (145), Expect = 4e-09 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R E+ +L+TLD LWK+HL +M+ L +++R + ++P +EYK + R F ML + Sbjct: 757 MRHFEKGVMLQTLDELWKEHLASMDYLRQGIHLRGYAQKDPKQEYKKESFRMFTEMLDSL 816 Query: 414 RRLTVEALLRYWSSPMESEEIFNTADQ*L------NNITSDE 307 + + AL R E E A Q + NN+ DE Sbjct: 817 KHQVITALTRVRVRTQEEMEEAERARQEMAARINQNNLPVDE 858
>SECA_SYNP7 (Q55357) Preprotein translocase secA subunit| Length = 948 Score = 60.1 bits (144), Expect = 6e-09 Identities = 28/88 (31%), Positives = 49/88 (55%) Frame = -3 Query: 633 LEVLQESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKI 454 L+ Q + +R ER +L+ +D LW++HL M L +V +R +G ++PL EYK Sbjct: 852 LKEAQIDQIQPGLMRQAERYFILQQIDTLWREHLQAMEALRESVGLRGYGQKDPLLEYKS 911 Query: 453 DGCRFFISMLSATRRLTVEALLRYWSSP 370 +G F+ M++A RR + ++ + P Sbjct: 912 EGYELFLEMMTAIRRNVIYSMFMFDPQP 939
>SECA_BUCBP (Q89AR1) Preprotein translocase secA subunit| Length = 850 Score = 59.7 bits (143), Expect = 7e-09 Identities = 29/85 (34%), Positives = 51/85 (60%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R ER +L TLD W++HL +M L +++R +G ++P +E+K + F++MLS++ Sbjct: 762 VRKYERLVILDTLDYFWREHLASMEYLRQGIHLRGYGQKDPKQEFKRESFFMFLNMLSSS 821 Query: 414 RRLTVEALLRYWSSPMESEEIFNTA 340 R V LL+ S + +I+N A Sbjct: 822 RYEIVSILLKKSISNNDFLKIYNHA 846
>SECA_RHOCA (P52966) Preprotein translocase secA subunit| Length = 904 Score = 59.3 bits (142), Expect = 9e-09 Identities = 31/80 (38%), Positives = 46/80 (57%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R IE++ LL+T+D W++HLV + L S V R + R+PL EYK + + F SML + Sbjct: 753 MRVIEKQILLQTIDAKWREHLVTLEHLRSVVGFRGYAQRDPLSEYKTESFQLFESMLDSL 812 Query: 414 RRLTVEALLRYWSSPMESEE 355 R + L + PM EE Sbjct: 813 RYEVTKRLGQI--RPMSDEE 830
>SECA_SYNY3 (Q55709) Preprotein translocase secA subunit| Length = 932 Score = 58.5 bits (140), Expect = 2e-08 Identities = 27/84 (32%), Positives = 48/84 (57%) Frame = -3 Query: 633 LEVLQESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKI 454 L+ Q + +R ER +L+ +D LW++HL +M L ++ +R +G ++PL EYK Sbjct: 840 LKETQVDKVRPGLMREAERYFILQQIDNLWREHLQSMEALRESIGLRGYGQKDPLIEYKQ 899 Query: 453 DGCRFFISMLSATRRLTVEALLRY 382 +G F+ M+ RR V +L ++ Sbjct: 900 EGYEMFLEMMIDIRRNVVYSLFQF 923
>SECA_ARATH (Q9SYI0) Preprotein translocase secA subunit, chloroplast precursor| Length = 1021 Score = 57.0 bits (136), Expect = 5e-08 Identities = 24/80 (30%), Positives = 47/80 (58%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 ++ ER +L +D LWK+HL + + AV +R + R+PL EYK++G F+ M++ Sbjct: 907 MKDAERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQI 966 Query: 414 RRLTVEALLRYWSSPMESEE 355 RR + ++ ++ ++ +E Sbjct: 967 RRNVIYSIYQFQPVRVKKDE 986
>SECA_ODOSI (P49649) Preprotein translocase secA subunit| Length = 888 Score = 56.6 bits (135), Expect = 6e-08 Identities = 31/82 (37%), Positives = 43/82 (52%) Frame = -3 Query: 630 EVLQESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKID 451 ++L+ + I+ ER +L +D WK+HL M+ L AV R +G RNPL EYK D Sbjct: 803 KILELEVEYPGIIQEFERTLILIYMDREWKEHLQKMSLLRDAVGWRKYGQRNPLSEYKED 862 Query: 450 GCRFFISMLSATRRLTVEALLR 385 + F TR L + LLR Sbjct: 863 AYKLFKYRGIVTRHLVIYELLR 884
>SECA_PEA (Q41062) Preprotein translocase secA subunit, chloroplast precursor| Length = 1011 Score = 55.8 bits (133), Expect = 1e-07 Identities = 23/67 (34%), Positives = 41/67 (61%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER +L +D LWK+HL + + AV +R + R+PL EYK++G F+ M++ RR Sbjct: 901 ERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRNV 960 Query: 402 VEALLRY 382 + ++ ++ Sbjct: 961 IYSIYQF 967
>SECA_HELPJ (Q9ZL57) Preprotein translocase secA subunit| Length = 865 Score = 55.5 bits (132), Expect = 1e-07 Identities = 26/92 (28%), Positives = 52/92 (56%) Frame = -3 Query: 585 IEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 406 IER L+ LD W++HL M+ L + +N+R + ++PL EYK + F+ ++ + Sbjct: 718 IERIVYLQILDNAWREHLYTMDNLKTGINLRGYNQKDPLVEYKKESYNLFLELIG---DI 774 Query: 405 TVEALLRYWSSPMESEEIFNTADQ*LNNITSD 310 +EA+ + E+E+ + A++ L+N + + Sbjct: 775 KIEAIQTFSKIQFENEQDSSDAERYLDNFSEE 806
>SECA_RICPR (Q9ZCX7) Preprotein translocase secA subunit| Length = 906 Score = 55.5 bits (132), Expect = 1e-07 Identities = 23/80 (28%), Positives = 44/80 (55%) Frame = -3 Query: 621 QESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCR 442 +E Y + + LL TLD +WKDHL +++ L +++R++ ++PL EYK + Sbjct: 737 KEEAYSSELMHNAVKYILLTTLDQVWKDHLYSLDHLRQGISLRAYAQKDPLSEYKREAFN 796 Query: 441 FFISMLSATRRLTVEALLRY 382 F ML+ + L ++ + + Sbjct: 797 LFEQMLNNLKELFIQTVYHF 816
>SECA_SPIOL (Q36795) Preprotein translocase secA subunit, chloroplast precursor| Length = 1036 Score = 55.1 bits (131), Expect = 2e-07 Identities = 24/76 (31%), Positives = 45/76 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER +L +D LWK+HL + + AV +R + R+PL EYK++G F+ M++ RR Sbjct: 922 ERFLILSNIDRLWKEHLQAIKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRNV 981 Query: 402 VEALLRYWSSPMESEE 355 + + ++ ++++E Sbjct: 982 IYSAYQFKPVVVKNQE 997
>SECA_CAUCR (P38380) Preprotein translocase secA subunit| Length = 923 Score = 54.7 bits (130), Expect = 2e-07 Identities = 22/69 (31%), Positives = 42/69 (60%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R +E+ LL+ +D+ W++HL++++ L + + +R +G R+PL EYK + F +L Sbjct: 770 MRSVEKSFLLQMIDLQWREHLMHLDHLRNVIGLRGYGQRDPLNEYKTEAFSLFEKLLGDL 829 Query: 414 RRLTVEALL 388 R T L+ Sbjct: 830 RTNTTRWLM 838
>SECA_BUCAP (Q8K9U3) Preprotein translocase secA subunit| Length = 874 Score = 54.3 bits (129), Expect = 3e-07 Identities = 24/57 (42%), Positives = 37/57 (64%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 424 IR IE+ +LKTLD LWK+HL M+ L +++R + ++P +EYK + F +ML Sbjct: 757 IRMIEKSIMLKTLDSLWKEHLSAMDYLRQGIHLRGYAQKDPKQEYKRESFNMFSNML 813
>SECA_HELPY (O25475) Preprotein translocase secA subunit| Length = 865 Score = 53.5 bits (127), Expect = 5e-07 Identities = 26/92 (28%), Positives = 50/92 (54%) Frame = -3 Query: 585 IEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRL 406 IER L+ LD W++HL M+ L + +N+R + ++PL EYK + F+ + + Sbjct: 718 IERIVYLQILDNAWREHLYTMDNLKTGINLRGYNQKDPLVEYKKESYNLFLEFI---EDI 774 Query: 405 TVEALLRYWSSPMESEEIFNTADQ*LNNITSD 310 EA+ + E+E+ + A++ L+N + + Sbjct: 775 KTEAIKTFSKIQFENEQDSSDAERYLDNFSEE 806
>SECA_ECOLI (P10408) Preprotein translocase secA subunit| Length = 901 Score = 53.5 bits (127), Expect = 5e-07 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R E+ +L+TLD LWK+HL M+ L +++R + ++P +EYK + F +ML + Sbjct: 759 MRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESL 818 Query: 414 RRLTVEALLRYW-SSPMESEEI 352 + + L + P E EE+ Sbjct: 819 KYEVISTLSKVQVRMPEEVEEL 840
>SECA_MYCSM (P71533) Preprotein translocase secA subunit| Length = 957 Score = 53.5 bits (127), Expect = 5e-07 Identities = 23/65 (35%), Positives = 38/65 (58%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R +ER LL +D W++HL M+ L + +R+ R+PL EY+ +G F+ ML A Sbjct: 764 MRQLERNVLLNVIDRQWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVGMLEAL 823 Query: 414 RRLTV 400 + +V Sbjct: 824 KEESV 828
>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit| Length = 940 Score = 53.5 bits (127), Expect = 5e-07 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 8/90 (8%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R +ER LL +D W++HL M+ L + +R+ R+PL EY+ +G F++ML Sbjct: 763 MRQLERNVLLNVVDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGV 822 Query: 414 R--------RLTVEALLRYWSSPMESEEIF 349 + L VEA+ +P+E E F Sbjct: 823 KEESVGFLFNLAVEAVPASHVAPVEIPEGF 852
>SECA_BACFI (P96313) Preprotein translocase secA subunit (Fragment)| Length = 473 Score = 53.1 bits (126), Expect = 7e-07 Identities = 19/68 (27%), Positives = 44/68 (64%) Frame = -3 Query: 621 QESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCR 442 +E ++ ++R E+ +L+T+D W +H+ M++L +++R++G +PL EY+ +G Sbjct: 334 KEEQFTPEHMREFEKVIMLRTVDRKWMNHIDQMDQLRQGIHLRAYGQNDPLREYRFEGFE 393 Query: 441 FFISMLSA 418 F +M+++ Sbjct: 394 MFEAMIAS 401
>SECA_BUCAI (P57297) Preprotein translocase secA subunit| Length = 875 Score = 52.8 bits (125), Expect = 9e-07 Identities = 27/74 (36%), Positives = 43/74 (58%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R IE+ +L+TLD LWK+HL ++ L +++R + ++P +EYK + F SML Sbjct: 759 MRIIEKIIMLQTLDSLWKEHLAAVDYLRQGIHLRGYAQKDPKQEYKRESFNMFSSMLELL 818 Query: 414 RRLTVEALLRYWSS 373 + V L R SS Sbjct: 819 KFEVVSFLSRINSS 832
>SECA_GUITH (O78441) Preprotein translocase secA subunit| Length = 877 Score = 52.8 bits (125), Expect = 9e-07 Identities = 24/70 (34%), Positives = 41/70 (58%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R +ER LL+ +D WK+HL + L ++ R +G ++PL EYK + F++M+S Sbjct: 801 MRELERSFLLQKIDSSWKEHLQQITILRESIGWRGYGQKDPLIEYKNEAFNLFVNMVSKI 860 Query: 414 RRLTVEALLR 385 R+ V + R Sbjct: 861 RQSVVYLVFR 870
>SECA1_MYCTU (P0A5Y8) Preprotein translocase secA 1 subunit| Length = 949 Score = 51.6 bits (122), Expect = 2e-06 Identities = 22/65 (33%), Positives = 38/65 (58%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R +ER LL +D W++HL M+ L + +R+ R+PL EY+ +G F++ML Sbjct: 763 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGM 822 Query: 414 RRLTV 400 + +V Sbjct: 823 KEESV 827
>SECA1_MYCBO (P0A5Y9) Preprotein translocase secA 1 subunit| Length = 949 Score = 51.6 bits (122), Expect = 2e-06 Identities = 22/65 (33%), Positives = 38/65 (58%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R +ER LL +D W++HL M+ L + +R+ R+PL EY+ +G F++ML Sbjct: 763 MRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGM 822 Query: 414 RRLTV 400 + +V Sbjct: 823 KEESV 827
>SECA_ANTSP (Q06461) Preprotein translocase secA subunit| Length = 878 Score = 51.2 bits (121), Expect = 3e-06 Identities = 26/85 (30%), Positives = 49/85 (57%) Frame = -3 Query: 639 TYLEVLQESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEY 460 +YLE L+ IR +E+ LL+ +D W++H+ ++ L ++ RS+G ++PL EY Sbjct: 790 SYLEQLRPG-----LIRQLEKYYLLQQIDYAWQEHINKISILKESIGWRSYGQQDPLIEY 844 Query: 459 KIDGCRFFISMLSATRRLTVEALLR 385 K + FI+M++ R+ + +R Sbjct: 845 KNEAFNLFINMVTYIRQTVIYLTMR 869
>SECA_STAS1 (Q49VV2) Preprotein translocase secA subunit| Length = 843 Score = 50.8 bits (120), Expect = 3e-06 Identities = 20/53 (37%), Positives = 37/53 (69%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 424 ER LL+++D W DH+ M++L +++RS+G +NPL +Y+ +G + F +M+ Sbjct: 715 ERMILLRSIDTHWTDHIDTMDQLRQGIHLRSYGQQNPLRDYQNEGHQLFDTMM 767
>SECA_STACA (P47994) Preprotein translocase secA subunit| Length = 844 Score = 50.4 bits (119), Expect = 4e-06 Identities = 20/53 (37%), Positives = 37/53 (69%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 424 ER LL+++D W DH+ M++L +++RS+G +NPL +Y+ +G + F +M+ Sbjct: 717 ERMILLRSIDGRWTDHIDTMDQLRQGIHLRSYGQQNPLRDYQNEGHQLFDTMM 769
>SECA_BORBU (O07497) Preprotein translocase secA subunit| Length = 899 Score = 49.7 bits (117), Expect = 7e-06 Identities = 22/68 (32%), Positives = 40/68 (58%) Frame = -3 Query: 588 GIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 409 G R LK +D +++HL N++ L AV +RS+ ++NP+ EYK +G F ++ + Sbjct: 762 GFLRYEYLKNIDFKFQEHLANLDSLREAVYLRSYANKNPITEYKEEGFSIFSELIKDIKV 821 Query: 408 LTVEALLR 385 T+ +L+ Sbjct: 822 STIRRVLQ 829
>SECA_STAHJ (Q4L4H8) Preprotein translocase secA subunit| Length = 845 Score = 48.9 bits (115), Expect = 1e-05 Identities = 25/82 (30%), Positives = 44/82 (53%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDTHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDMMMQNIEEDT 774 Query: 402 VEALLRYWSSPMESEEIFNTAD 337 + +L+ E+ E T D Sbjct: 775 SKFILKSVIQVDENIEREKTTD 796
>SECA_STAAW (Q7A1G4) Preprotein translocase secA subunit| Length = 843 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDT 774 Query: 402 VEALLR 385 + +L+ Sbjct: 775 CKFILK 780
>SECA_STAAU (O06446) Preprotein translocase secA subunit| Length = 843 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDT 774 Query: 402 VEALLR 385 + +L+ Sbjct: 775 CKFILK 780
>SECA_STAAS (Q6GB77) Preprotein translocase secA subunit| Length = 843 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDT 774 Query: 402 VEALLR 385 + +L+ Sbjct: 775 CKFILK 780
>SECA_STAAR (Q6GIN8) Preprotein translocase secA subunit| Length = 843 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDT 774 Query: 402 VEALLR 385 + +L+ Sbjct: 775 CKFILK 780
>SECA_STAAN (Q7A6R5) Preprotein translocase secA subunit| Length = 843 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDT 774 Query: 402 VEALLR 385 + +L+ Sbjct: 775 CKFILK 780
>SECA_STAAM (Q99VM2) Preprotein translocase secA subunit| Length = 843 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDT 774 Query: 402 VEALLR 385 + +L+ Sbjct: 775 CKFILK 780
>SECA_STAAC (Q5HHR7) Preprotein translocase secA subunit| Length = 843 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDT 774 Query: 402 VEALLR 385 + +L+ Sbjct: 775 CKFILK 780
>SECA_TREPA (O83394) Preprotein translocase secA subunit| Length = 916 Score = 48.5 bits (114), Expect = 2e-05 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%) Frame = -3 Query: 618 ESRYHDAYIRGIE---REALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDG 448 ES+Y A + ++ R ++ +D W DHL + L +V +RS+G +NPL EYK++G Sbjct: 769 ESKYLLAGAQNMDTFIRYQYVQAIDKKWLDHLELLEILRESVYLRSYGQKNPLTEYKLEG 828 Query: 447 CRFFISMLSATRRLTVEALLR 385 F +ML R ++R Sbjct: 829 FDLFYTMLDDIRLSIASQVVR 849
>SECA_STAES (Q8CPZ2) Preprotein translocase secA subunit| Length = 844 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDTHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDT 774 Query: 402 VEALLR 385 + +L+ Sbjct: 775 CKYILK 780
>SECA_STAEQ (Q5HQX6) Preprotein translocase secA subunit| Length = 844 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLT 403 ER LL+++D W DH+ M++L +++RS+ +NPL +Y+ +G F M+ T Sbjct: 715 ERMILLRSIDTHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDT 774 Query: 402 VEALLR 385 + +L+ Sbjct: 775 CKYILK 780
>SECA_STRLI (P0A4G7) Preprotein translocase secA subunit| Length = 947 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/74 (28%), Positives = 40/74 (54%) Frame = -3 Query: 621 QESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCR 442 +E + +R +ER +L LD W++HL M+ L + +R+ ++PL EY+ +G Sbjct: 769 REKQLGSEIMRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFD 828 Query: 441 FFISMLSATRRLTV 400 F +M+ + +V Sbjct: 829 MFQAMMDGIKEESV 842
>SECA_STRCO (P0A4G6) Preprotein translocase secA subunit| Length = 947 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/74 (28%), Positives = 40/74 (54%) Frame = -3 Query: 621 QESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCR 442 +E + +R +ER +L LD W++HL M+ L + +R+ ++PL EY+ +G Sbjct: 769 REKQLGSEIMRELERRVVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFD 828 Query: 441 FFISMLSATRRLTV 400 F +M+ + +V Sbjct: 829 MFQAMMDGIKEESV 842
>SECA_BACSU (P28366) Preprotein translocase secA subunit| Length = 841 Score = 48.5 bits (114), Expect = 2e-05 Identities = 19/68 (27%), Positives = 40/68 (58%) Frame = -3 Query: 621 QESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCR 442 +E ++ +R E+ +L+ +D W DH+ M++L +++R++ NPL EY+++G Sbjct: 699 KEEQFGKEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFA 758 Query: 441 FFISMLSA 418 F M+ + Sbjct: 759 MFEHMIES 766
>SECA_AQUAE (O67718) Preprotein translocase secA subunit| Length = 984 Score = 46.6 bits (109), Expect = 6e-05 Identities = 23/80 (28%), Positives = 45/80 (56%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R +ER LL LD W++HL +++L + +R + ++PL EYK + F +M+ Sbjct: 848 MRELERVILLNLLDNAWREHLHTLDRLREGIYLRGYAGKDPLIEYKREAYELFENMM--- 904 Query: 414 RRLTVEALLRYWSSPMESEE 355 + + L+ ++ ++SEE Sbjct: 905 ENVKLNTLMTLFNVQIKSEE 924
>SECA_LISMO (P47847) Preprotein translocase secA subunit| Length = 837 Score = 46.2 bits (108), Expect = 8e-05 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 418 E+ LL+ +D W DH+ M+ L +++R++G +PL EY+ +G F +M+S+ Sbjct: 712 EKVVLLRVVDTKWVDHIDAMDHLRDGIHLRAYGQIDPLREYQSEGFEMFEAMVSS 766
>SECA_LISIN (Q927Y3) Preprotein translocase secA subunit| Length = 837 Score = 46.2 bits (108), Expect = 8e-05 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = -3 Query: 582 EREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSA 418 E+ LL+ +D W DH+ M+ L +++R++G +PL EY+ +G F +M+S+ Sbjct: 712 EKVVLLRVVDTKWVDHIDAMDHLRDGIHLRAYGQIDPLREYQSEGFEMFEAMVSS 766
>SECA_CHLTR (O84707) Preprotein translocase secA subunit| Length = 969 Score = 45.1 bits (105), Expect = 2e-04 Identities = 25/84 (29%), Positives = 42/84 (50%) Frame = -3 Query: 642 ATYLEVLQESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEE 463 A + E++ + I R ++ +D WK HLV+M+ L S V +RS G ++PL E Sbjct: 842 AEFTEIIGSAANAQGICNDILRSVIISHIDEEWKVHLVDMDLLRSEVGLRSVGQKDPLIE 901 Query: 462 YKIDGCRFFISMLSATRRLTVEAL 391 +K + F ++ R V+ L Sbjct: 902 FKNESFLLFEGLIRDIRIAIVKHL 925
>SECA_CYACA (O19911) Preprotein translocase secA subunit| Length = 895 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/70 (28%), Positives = 37/70 (52%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 ++ +ER +L+ +D W +H+ M+ L + R + ++PL EYK + FI M+ Sbjct: 818 MKSLERSLILEQIDTNWSEHIQQMSFLKEFIGWRGYAQKDPLIEYKNESYILFIKMIRTI 877 Query: 414 RRLTVEALLR 385 R+ + L R Sbjct: 878 RQNILYLLFR 887
>SECA_STRGR (P95759) Preprotein translocase secA subunit| Length = 940 Score = 43.9 bits (102), Expect = 4e-04 Identities = 19/65 (29%), Positives = 36/65 (55%) Frame = -3 Query: 594 IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSAT 415 +R +E +L LD W++HL M+ L + +R+ ++PL EY+ +G F +M+ Sbjct: 769 MRELEPRWVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGI 828 Query: 414 RRLTV 400 + +V Sbjct: 829 KEESV 833
>SECA_PAVLU (Q01570) Preprotein translocase secA subunit| Length = 891 Score = 43.9 bits (102), Expect = 4e-04 Identities = 18/52 (34%), Positives = 32/52 (61%) Frame = -3 Query: 591 RGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFF 436 + +E LL+++D +WK+ L M L ++ R++G R+PL EY+ + R F Sbjct: 818 QSLEYAFLLQSIDQVWKEQLTRMELLKESIGWRAYGQRDPLLEYQKEAYRIF 869
>SECA_CHLPN (Q9Z765) Preprotein translocase secA subunit| Length = 970 Score = 43.9 bits (102), Expect = 4e-04 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = -3 Query: 600 AYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLS 421 A R + R ++ +D W+ HLV+M+ L S V +R+ G ++PL E+K + F S++ Sbjct: 856 AICRDVVRSVMVMHIDEQWRIHLVDMDLLRSEVGLRTVGQKDPLLEFKHESFLLFESLIR 915 Query: 420 ATRRLTVEALLR 385 R L R Sbjct: 916 DIRITIARHLFR 927
>SECA_CHLMU (Q9PLM5) Preprotein translocase secA subunit| Length = 968 Score = 42.4 bits (98), Expect = 0.001 Identities = 23/82 (28%), Positives = 41/82 (50%) Frame = -3 Query: 636 YLEVLQESRYHDAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYK 457 + E++ + I R ++ +D WK HL++M+ L S V +RS G ++PL E+K Sbjct: 844 FTEIIGSASGAQGVCNDILRSVIISHIDEEWKVHLMDMDLLRSEVGLRSVGQKDPLIEFK 903 Query: 456 IDGCRFFISMLSATRRLTVEAL 391 + F ++ R V+ L Sbjct: 904 NESFLLFEGLIRDIRIAIVKHL 925
>SECA_OLILU (Q32743) Preprotein translocase secA subunit| Length = 884 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/71 (28%), Positives = 36/71 (50%) Frame = -3 Query: 603 DAYIRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 424 + Y + ER +L+++D W +L M + ++ R + ++PL EYK +G F M Sbjct: 806 EEYYKEYERSCVLESIDHGWSTNLEKMETIRESIVWRVYAQKDPLAEYKKEGFSTFRKMD 865 Query: 423 SATRRLTVEAL 391 +R V A+ Sbjct: 866 EEMKRFLVFAV 876
>SECA2_MYCTU (P66785) Preprotein translocase secA 2 subunit| Length = 808 Score = 37.7 bits (86), Expect = 0.029 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Frame = -3 Query: 579 REALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 400 R+ +L LD W DHL + + ++++R+ G +NPL+E+ R+ V Sbjct: 698 RQIMLYHLDRGWADHLAYLADIRESIHLRALGRQNPLDEF---------------HRMAV 742 Query: 399 EALLRYWSSPME-SEEIFNTADQ*LNNITSDEP 304 +A + +E +++ F TA N+ EP Sbjct: 743 DAFASLAADAIEAAQQTFETA-----NVLDHEP 770
>SECA2_MYCBO (P66786) Preprotein translocase secA 2 subunit| Length = 808 Score = 37.7 bits (86), Expect = 0.029 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Frame = -3 Query: 579 REALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTV 400 R+ +L LD W DHL + + ++++R+ G +NPL+E+ R+ V Sbjct: 698 RQIMLYHLDRGWADHLAYLADIRESIHLRALGRQNPLDEF---------------HRMAV 742 Query: 399 EALLRYWSSPME-SEEIFNTADQ*LNNITSDEP 304 +A + +E +++ F TA N+ EP Sbjct: 743 DAFASLAADAIEAAQQTFETA-----NVLDHEP 770
>SECA_MYCPN (P75559) Preprotein translocase secA subunit| Length = 808 Score = 34.7 bits (78), Expect = 0.25 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = -3 Query: 579 REALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRR 409 RE ++ +D W +HL N+ KL V +RS +PL Y + F +ML R Sbjct: 710 REIMITAMDKHWIEHLDNVFKLREGVTLRSMEQTSPLNVYIRETDILFQTMLQKIAR 766
>SECA_MYCGE (P47318) Preprotein translocase secA subunit| Length = 806 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = -3 Query: 579 REALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISML 424 R+ ++ ++D W +HL ++ KL V +RS H +PL Y + F +ML Sbjct: 710 RDIIITSMDKHWTEHLDSVFKLREGVVLRSMEHTSPLNVYIKETDILFKTML 761
>SECA2_MYCLE (O32922) Preprotein translocase secA 2 subunit| Length = 778 Score = 33.5 bits (75), Expect = 0.55 Identities = 13/40 (32%), Positives = 25/40 (62%) Frame = -3 Query: 579 REALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEY 460 R +L LD W DHL + + ++++R+ G ++PL+E+ Sbjct: 668 RLIMLYHLDRGWADHLAYLADIRESIHLRALGRQSPLDEF 707
>GYRA_BACHD (O50628) DNA gyrase subunit A (EC 5.99.1.3)| Length = 833 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 6/59 (10%) Frame = -3 Query: 612 RYHDAYIRGIEREAL-LKTLDMLWKDHLVNMNKLSSAVNV-----RSFGHRNPLEEYKI 454 R+H+ +R + R A +K + + DH+V M+ + +V + FG R P+ +Y+I Sbjct: 670 RFHETDVRLMGRTATGVKGISLTGDDHVVGMDIVEDGQDVLIVTEKGFGKRTPIADYRI 728
>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)| Length = 785 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = -3 Query: 633 LEVLQESRYHDAYIRGIER-EALLKTLDMLWKDHLVNMNKLSSAV 502 L++ + Y ++ R +E L +L WKDH+V+M +SS + Sbjct: 99 LDIRKNDSYSTSWSRSLEAAHRFLSSLVNSWKDHIVSMQMISSVL 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,092,343 Number of Sequences: 219361 Number of extensions: 1660935 Number of successful extensions: 3218 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 3171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3218 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
